Metagenome Family F079420

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079420
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	47 residues
Representative Sequence	GIVMLSSRRALQISGTLVAGLEKSTFLRCLQAPFNILHSLAVSL
Number of Associated Samples	38
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	24.56 %
% of genes near scaffold ends (potentially truncated)	72.17 %
% of genes from short scaffolds (< 2000 bps)	79.13 %
Associated GOLD sequencing projects	38
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (83.478 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens (86.087 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Fungus → Fungus corpus (86.087 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00078	RVT_1	2.61
PF00673	Ribosomal_L5_C	0.87
PF00665	rve	0.87
PF13976	gag_pre-integrs	0.87
PF08284	RVP_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0094	Ribosomal protein L5	Translation, ribosomal structure and biogenesis [J]	0.87
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.87
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.87
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.87
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
All Organisms	root	All Organisms	16.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
cellular organisms	root	All Organisms → cellular organisms	15.65 %
Viruses	superkingdom	All Organisms → Viruses	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	15.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	14.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	14.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	14.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	14.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	14.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	14.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Agaricomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae	3.48 %
Agaricomycetes incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis	2.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Agaricales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	3.48 %
Polyporales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales	2.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Phanerochaetaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Phanerochaetaceae	0.87 %
Agaricaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Phanerodontia	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Phanerochaetaceae → Phanerodontia	0.87 %
Leucoagaricus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Leucoagaricus	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.48 %
Phanerodontia chrysosporium	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Phanerochaetaceae → Phanerodontia → Phanerodontia chrysosporium	0.87 %
Leucoagaricus leucothites	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Leucoagaricus → Leucoagaricus leucothites	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300011394\|Ga0153970_1001655	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	5269	Open in IMG/M
3300011394\|Ga0153970_1002969	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Leucoagaricus → Leucoagaricus leucothites	3790	Open in IMG/M
3300011394\|Ga0153970_1003906	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	3213	Open in IMG/M
3300011394\|Ga0153970_1018014	Not Available	1304	Open in IMG/M
3300011394\|Ga0153970_1019034	Not Available	1260	Open in IMG/M
3300011394\|Ga0153970_1024540	Not Available	1067	Open in IMG/M
3300011394\|Ga0153970_1026422	Not Available	1014	Open in IMG/M
3300011394\|Ga0153970_1026831	Not Available	1003	Open in IMG/M
3300011394\|Ga0153970_1042392	Not Available	714	Open in IMG/M
3300011394\|Ga0153970_1061948	Not Available	527	Open in IMG/M
3300011394\|Ga0153970_1064282	Not Available	512	Open in IMG/M
3300011396\|Ga0153960_1001621	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Phanerochaetaceae → Phanerodontia → Phanerodontia chrysosporium	5094	Open in IMG/M
3300011396\|Ga0153960_1001667	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales	5017	Open in IMG/M
3300011396\|Ga0153960_1004566	All Organisms → Viruses → Predicted Viral	3050	Open in IMG/M
3300011396\|Ga0153960_1055507	Not Available	698	Open in IMG/M
3300011396\|Ga0153960_1057082	Not Available	685	Open in IMG/M
3300011401\|Ga0153984_1007413	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	2405	Open in IMG/M
3300011401\|Ga0153984_1014448	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	1746	Open in IMG/M
3300011401\|Ga0153984_1043006	Not Available	972	Open in IMG/M
3300011401\|Ga0153984_1043087	Not Available	972	Open in IMG/M
3300011401\|Ga0153984_1072158	Not Available	723	Open in IMG/M
3300011401\|Ga0153984_1090960	Not Available	634	Open in IMG/M
3300011401\|Ga0153984_1125705	Not Available	530	Open in IMG/M
3300011411\|Ga0153933_1094362	Not Available	632	Open in IMG/M
3300012054\|Ga0154007_1006399	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	2490	Open in IMG/M
3300012054\|Ga0154007_1024511	Not Available	873	Open in IMG/M
3300012054\|Ga0154007_1040581	Not Available	553	Open in IMG/M
3300012054\|Ga0154007_1045032	Not Available	502	Open in IMG/M
3300012057\|Ga0153995_1017596	Not Available	1359	Open in IMG/M
3300012057\|Ga0153995_1027691	Not Available	946	Open in IMG/M
3300012057\|Ga0153995_1039498	Not Available	702	Open in IMG/M
3300012059\|Ga0153991_1021595	Not Available	1340	Open in IMG/M
3300012059\|Ga0153991_1022009	Not Available	1324	Open in IMG/M
3300012059\|Ga0153991_1042308	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	823	Open in IMG/M
3300012059\|Ga0153991_1065716	Not Available	573	Open in IMG/M
3300012069\|Ga0153965_1005483	Not Available	3334	Open in IMG/M
3300012069\|Ga0153965_1008941	Not Available	2562	Open in IMG/M
3300012069\|Ga0153965_1014174	Not Available	1947	Open in IMG/M
3300012069\|Ga0153965_1016824	Not Available	1740	Open in IMG/M
3300012069\|Ga0153965_1023883	Not Available	1370	Open in IMG/M
3300012069\|Ga0153965_1030104	Not Available	1151	Open in IMG/M
3300012069\|Ga0153965_1036907	Not Available	975	Open in IMG/M
3300012069\|Ga0153965_1038576	Not Available	937	Open in IMG/M
3300012070\|Ga0153963_1001889	Not Available	4296	Open in IMG/M
3300012070\|Ga0153963_1026113	Not Available	1085	Open in IMG/M
3300012070\|Ga0153963_1031871	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	950	Open in IMG/M
3300012070\|Ga0153963_1035169	Not Available	890	Open in IMG/M
3300012070\|Ga0153963_1041864	Not Available	787	Open in IMG/M
3300012070\|Ga0153963_1053109	Not Available	664	Open in IMG/M
3300012071\|Ga0153983_1005133	Not Available	2946	Open in IMG/M
3300012071\|Ga0153983_1006941	Not Available	2460	Open in IMG/M
3300012071\|Ga0153983_1020237	Not Available	1295	Open in IMG/M
3300012071\|Ga0153983_1051358	Not Available	699	Open in IMG/M
3300012072\|Ga0153975_1030807	Not Available	970	Open in IMG/M
3300012073\|Ga0153979_1018953	Not Available	1596	Open in IMG/M
3300012073\|Ga0153979_1056839	Not Available	766	Open in IMG/M
3300012076\|Ga0153971_1031805	Not Available	1010	Open in IMG/M
3300012076\|Ga0153971_1052349	Not Available	727	Open in IMG/M
3300012083\|Ga0154000_1018291	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	1929	Open in IMG/M
3300012083\|Ga0154000_1064322	Not Available	844	Open in IMG/M
3300012083\|Ga0154000_1082096	Not Available	703	Open in IMG/M
3300012084\|Ga0153934_1018311	Not Available	909	Open in IMG/M
3300012086\|Ga0153949_1063575	Not Available	917	Open in IMG/M
3300012088\|Ga0153944_1060326	Not Available	755	Open in IMG/M
3300012095\|Ga0153955_101721	All Organisms → cellular organisms → Eukaryota	3376	Open in IMG/M
3300012100\|Ga0154008_113453	Not Available	851	Open in IMG/M
3300012120\|Ga0153998_1002936	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	3996	Open in IMG/M
3300012124\|Ga0153976_1021849	Not Available	1096	Open in IMG/M
3300012130\|Ga0153964_1018323	Not Available	1289	Open in IMG/M
3300012131\|Ga0153994_1025465	Not Available	1063	Open in IMG/M
3300012131\|Ga0153994_1033543	Not Available	861	Open in IMG/M
3300012135\|Ga0153982_1006153	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	2837	Open in IMG/M
3300012135\|Ga0153982_1020578	Not Available	1318	Open in IMG/M
3300012135\|Ga0153982_1024583	Not Available	1169	Open in IMG/M
3300012135\|Ga0153982_1052490	Not Available	665	Open in IMG/M
3300012136\|Ga0153985_1004667	Not Available	3213	Open in IMG/M
3300012136\|Ga0153985_1023073	Not Available	1272	Open in IMG/M
3300012136\|Ga0153985_1039127	Not Available	892	Open in IMG/M
3300012136\|Ga0153985_1055900	Not Available	680	Open in IMG/M
3300012139\|Ga0153961_1021165	Not Available	1279	Open in IMG/M
3300012139\|Ga0153961_1042241	Not Available	786	Open in IMG/M
3300012139\|Ga0153961_1075795	Not Available	536	Open in IMG/M
3300012141\|Ga0153958_1007201	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	3008	Open in IMG/M
3300012141\|Ga0153958_1015372	Not Available	1891	Open in IMG/M
3300012141\|Ga0153958_1024448	Not Available	1383	Open in IMG/M
3300012141\|Ga0153958_1039867	Not Available	967	Open in IMG/M
3300012154\|Ga0153953_1038374	Not Available	938	Open in IMG/M
3300012162\|Ga0153939_1063770	Not Available	668	Open in IMG/M
3300012169\|Ga0153990_1001456	Not Available	3965	Open in IMG/M
3300012169\|Ga0153990_1050924	Not Available	942	Open in IMG/M
3300012169\|Ga0153990_1052379	Not Available	928	Open in IMG/M
3300012169\|Ga0153990_1069484	Not Available	795	Open in IMG/M
3300012169\|Ga0153990_1092154	Not Available	679	Open in IMG/M
3300012169\|Ga0153990_1112549	Not Available	607	Open in IMG/M
3300012169\|Ga0153990_1140255	Not Available	539	Open in IMG/M
3300012177\|Ga0153943_1041058	Not Available	986	Open in IMG/M
3300012180\|Ga0153974_1016505	Not Available	1580	Open in IMG/M
3300012677\|Ga0153928_1054184	Not Available	780	Open in IMG/M
3300012995\|Ga0157361_1004125	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	4186	Open in IMG/M
3300012995\|Ga0157361_1007715	Not Available	2784	Open in IMG/M
3300012995\|Ga0157361_1015125	Not Available	1740	Open in IMG/M
3300012998\|Ga0157362_1000344	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales	15374	Open in IMG/M
3300012998\|Ga0157362_1180388	Not Available	709	Open in IMG/M
3300012998\|Ga0157362_1186531	Not Available	684	Open in IMG/M
3300012998\|Ga0157362_1258636	Not Available	503	Open in IMG/M
3300013000\|Ga0157360_1004507	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	4965	Open in IMG/M
3300013000\|Ga0157360_1159538	Not Available	726	Open in IMG/M
3300013000\|Ga0157360_1165703	Not Available	712	Open in IMG/M
3300013001\|Ga0157365_10120159	Not Available	837	Open in IMG/M
3300013001\|Ga0157365_10135104	Not Available	790	Open in IMG/M
3300013001\|Ga0157365_10275125	Not Available	547	Open in IMG/M
3300013001\|Ga0157365_10278896	Not Available	543	Open in IMG/M
3300013002\|Ga0157364_1078679	Not Available	1948	Open in IMG/M
3300013002\|Ga0157364_1183522	Not Available	790	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Fungi	Host-Associated → Fungi	100.00%

Habitat	Taxonomy	Distribution
Mycelium	Host-Associated → Fungi → Mycelium	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	86.09%
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	13.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300011394	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA054 MetaG	Host-Associated	Open in IMG/M
3300011396	Attine ant fungus gardens microbial communities from Florida, USA - TSFL044 MetaG	Host-Associated	Open in IMG/M
3300011401	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaG	Host-Associated	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012054	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC091 MetaG	Host-Associated	Open in IMG/M
3300012057	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC079 MetaG	Host-Associated	Open in IMG/M
3300012059	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC075 MetaG	Host-Associated	Open in IMG/M
3300012069	Attine ant fungus gardens microbial communities from Florida, USA - TSFL049 MetaG	Host-Associated	Open in IMG/M
3300012070	Attine ant fungus gardens microbial communities from Florida, USA - TSFL047 MetaG	Host-Associated	Open in IMG/M
3300012071	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA067 MetaG	Host-Associated	Open in IMG/M
3300012072	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA059 MetaG	Host-Associated	Open in IMG/M
3300012073	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA063 MetaG	Host-Associated	Open in IMG/M
3300012076	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA055 MetaG	Host-Associated	Open in IMG/M
3300012083	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC084 MetaG	Host-Associated	Open in IMG/M
3300012084	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ018 MetaG	Host-Associated	Open in IMG/M
3300012086	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ033 MetaG	Host-Associated	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300012095	Attine ant fungus gardens microbial communities from Florida, USA - TSFL039 MetaG	Host-Associated	Open in IMG/M
3300012100	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ092 MetaG	Host-Associated	Open in IMG/M
3300012120	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC082 MetaG	Host-Associated	Open in IMG/M
3300012124	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA060 MetaG	Host-Associated	Open in IMG/M
3300012130	Attine ant fungus gardens microbial communities from Florida, USA - TSFL048 MetaG	Host-Associated	Open in IMG/M
3300012131	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC078 MetaG	Host-Associated	Open in IMG/M
3300012135	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA066 MetaG	Host-Associated	Open in IMG/M
3300012136	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA069 MetaG	Host-Associated	Open in IMG/M
3300012139	Attine ant fungus gardens microbial communities from Florida, USA - TSFL045 MetaG	Host-Associated	Open in IMG/M
3300012141	Attine ant fungus gardens microbial communities from Florida, USA - TSFL042 MetaG	Host-Associated	Open in IMG/M
3300012154	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ037 MetaG	Host-Associated	Open in IMG/M
3300012162	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ023 MetaG	Host-Associated	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012995	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM2	Host-Associated	Open in IMG/M
3300012998	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM3	Host-Associated	Open in IMG/M
3300013000	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM1	Host-Associated	Open in IMG/M
3300013001	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM3	Host-Associated	Open in IMG/M
3300013002	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0153970_10016552	3300011394	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGLEKSTFLRCLQVPSNILHSLAVSL*
Ga0153970_10029694	3300011394	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGLEKSTFLRCLQAPFKILHSLAVSL*
Ga0153970_10039062	3300011394	Attine Ant Fungus Gardens	MLSSRRALQISGTLAAGLEKSTFLRYLQASFNILHSLAVSL*
Ga0153970_10180143	3300011394	Attine Ant Fungus Gardens	RRALQISGTLVAGLEKSTFLRCLQAPFNILHSLAVSL*
Ga0153970_10190341	3300011394	Attine Ant Fungus Gardens	YEIVMLSFRRALQISGTLVASLKKSIFLRCNILYFLAVSL*
Ga0153970_10245401	3300011394	Attine Ant Fungus Gardens	TIPIILCFYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQVSFNILHSLAVSL*
Ga0153970_10264221	3300011394	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGFEKSTFLRRLQAPFNILHSLAVSL*
Ga0153970_10268312	3300011394	Attine Ant Fungus Gardens	SNHIMFYGIVMLSSRRALQISGTLVAGLEKSTFLKHLQAPFNILHFLAVSL*
Ga0153970_10423922	3300011394	Attine Ant Fungus Gardens	SRRALQISGTLVAGFEKSTFLRRLQAPFNILHSLAVSL*
Ga0153970_10619481	3300011394	Attine Ant Fungus Gardens	IPFQSYFVYGIVMLSSRRALQISGTLVAGLEKSTFLRHLQAPFNILYSLAISL*
Ga0153970_10642821	3300011394	Attine Ant Fungus Gardens	IMLHQILFQSYYIYGIVMLSSRRALQISGTLVADFEKSTFLRHLQVSYNILYSLAISL*
Ga0153960_10016219	3300011396	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGLEKPTFLRYLQVPFNILYSLAISL*
Ga0153960_10016678	3300011396	Attine Ant Fungus Gardens	MLSSRRALQISGTLVASFEKSTFLRYLQAPFNILHSLAVSW*
Ga0153960_10045664	3300011396	Attine Ant Fungus Gardens	YGIVMLSSRRALQISSTLVAGLEKSIFLRHLQVPFNTLHSLAVSL*
Ga0153960_10555072	3300011396	Attine Ant Fungus Gardens	IMLHLNTIPIILCFYGIVMLSSRRALQISGTLVASLEKSTFLRRLQVSFNILHSLAVSL*
Ga0153960_10570822	3300011396	Attine Ant Fungus Gardens	CFYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQVSFNILHSLAVSL*
Ga0153984_10074134	3300011401	Attine Ant Fungus Gardens	MLSSRRALQISGTLVASLEKSTFLRHLQVPFKILYSLAVSL*
Ga0153984_10144484	3300011401	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGLEKSTFLRRLQVPFNTLH
Ga0153984_10430061	3300011401	Attine Ant Fungus Gardens	YVYGIVMLSSRRALQISGTLVASLEKSIFLRRLQVPFKILYSLAINL*
Ga0153984_10430872	3300011401	Attine Ant Fungus Gardens	VYGIVMLSSRRALQISGTLVAGFEKSTFLRRLQAPFNILHSLAISL*
Ga0153984_10721582	3300011401	Attine Ant Fungus Gardens	LSSRRALQISGTLVAGFEKSTFLRRLQAPFNILHSLAVSL*
Ga0153984_10909601	3300011401	Attine Ant Fungus Gardens	VTPEYHSNHIMFYGIVMLSSRRALQISGTLVAGLEKSTFLKHLQAPFNILHFLAVSL*
Ga0153984_11257051	3300011401	Attine Ant Fungus Gardens	VTPEYHSNHIMFYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQASFNILHSLAVSL*
Ga0153933_10943622	3300011411	Attine Ant Fungus Gardens	DSRRALQISGTLVASLEKSTSLRYLQALFSILHSLVVSL*
Ga0154007_10063994	3300012054	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGLEKSTFLRHLQASFNILHSLAVSL*
Ga0154007_10245112	3300012054	Attine Ant Fungus Gardens	LHQILFQSYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRGLQASFSTLYSLAVSL*
Ga0154007_10405812	3300012054	Attine Ant Fungus Gardens	LHQILFQSYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRGLQASFSTLHSLAVSL*
Ga0154007_10450322	3300012054	Attine Ant Fungus Gardens	FQSYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQAPFNILHSLAISL*
Ga0153995_10175962	3300012057	Attine Ant Fungus Gardens	LFQSYCVYGIVMLSSRRALQISGTLVAGLEKSTFLRCLQAPSNILHSLAVSL*
Ga0153995_10276912	3300012057	Attine Ant Fungus Gardens	SYCVYGIVMLSSRRALQISGTLVAGLEKSTFLRHLQASFNILHSLAVSL*
Ga0153995_10394981	3300012057	Attine Ant Fungus Gardens	LCYTKYHSNHIIYGIVMLSSRRALQISGTLVAVLEKSTFLRCLQVSFDTLYSLAVSL*
Ga0153991_10215951	3300012059	Attine Ant Fungus Gardens	QSYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRGLQASFSTLHSLAVSL*
Ga0153991_10220091	3300012059	Attine Ant Fungus Gardens	GIVMLSSRRALQISGTLVAGLEKSTFLRCLQAPFNILHSLAVSL*
Ga0153991_10423082	3300012059	Attine Ant Fungus Gardens	MLYIPSQSCYVYEIVMLSFRRALQISGTLVASLKKSIFLRCNILYFLAVSL
Ga0153991_10657161	3300012059	Attine Ant Fungus Gardens	MLSSRRALQMSGTLVAGFEKSTFLRHLQAPFNILHSLAVSL*
Ga0153965_10054833	3300012069	Attine Ant Fungus Gardens	MLSSRIALQISGTLVAGLEKSTFLRRLQVPFNILHSLAISL*
Ga0153965_10089411	3300012069	Attine Ant Fungus Gardens	MLHQIPFQLYYVYGIVILSSRRALQISSTLVAGLEKSTFLRHLQVPFNTLYSLAVSL*
Ga0153965_10141741	3300012069	Attine Ant Fungus Gardens	IPFQSYCVYGIVMLSSRRALQISGTLVAGLEKSTFLRHLQVSFNILHSLAVSL*
Ga0153965_10168241	3300012069	Attine Ant Fungus Gardens	SYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQVPFNTLHSLAVSL*
Ga0153965_10238832	3300012069	Attine Ant Fungus Gardens	LHLNTIPIILCFYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQVSFNILHFLAVSL*
Ga0153965_10301042	3300012069	Attine Ant Fungus Gardens	QSYYVYGIVMLSSRRALQISGTLVASLEKSIFLRRLQVPFNILYSLAVNL*
Ga0153965_10369071	3300012069	Attine Ant Fungus Gardens	GIVMLSSRRALQISGTLVAGLEKSTFLRCLQAPFNILYSLAVSL*
Ga0153965_10385761	3300012069	Attine Ant Fungus Gardens	QSYYVYGIVMLSSRRALQISGTLVASLEKSIFLRRLQVPFKILYSLAINL*
Ga0153965_10562351	3300012069	Attine Ant Fungus Gardens	MPFMLHRVPFQSYCVYGIVMLSSKRALQISGTLLAGFEKSTFLRRLQAPFNILHSLAESL
Ga0153963_10018893	3300012070	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGLEKSTFLRHLQAPFNILHSLAVSL*
Ga0153963_10261131	3300012070	Attine Ant Fungus Gardens	IMLHLNTIPIILCFYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQVSFNILHSLAVSL*
Ga0153963_10318712	3300012070	Attine Ant Fungus Gardens	MLYRIPFHLYYVYGIVMLSSRRALQISGILVAGLEKSTFLRRLQAPFNTLH
Ga0153963_10351692	3300012070	Attine Ant Fungus Gardens	MLHQILFQSYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRGLQASFSTLHSLAVSL*
Ga0153963_10418642	3300012070	Attine Ant Fungus Gardens	IVMLSSRRALQISGTLVAGLEKSTFLRCLQAPFKILHSLAVSL*
Ga0153963_10531091	3300012070	Attine Ant Fungus Gardens	IVMLSSRRALQISGTLVASLEKSTFLRYLQVSFNTLYSLAVSL*
Ga0153983_10051331	3300012071	Attine Ant Fungus Gardens	MLHQISFQSYYVYRIVILSSRRALQISGTLVASLEKSTFLRHLQVPFNTLYSLAISL*
Ga0153983_10069412	3300012071	Attine Ant Fungus Gardens	MLSSRRALQMSSTLVAGFEKSTFLRHLQAPFNILYSLAVSL*
Ga0153983_10202371	3300012071	Attine Ant Fungus Gardens	IPFQSYCVYGIVMLSSRRALQISGTLVAGFEKSTFLRRLQAPFNILHSLAISL*
Ga0153983_10513581	3300012071	Attine Ant Fungus Gardens	PEYHSNHIMFYGIVMLSSRRALQISGTLVAGLEKSTFLKHLQAPFNILHFLAVSL*
Ga0153975_10308071	3300012072	Attine Ant Fungus Gardens	YVYGLVILSSRRALQISGTLVAGLERSISFRRLQVPFSILYSLAVSL*
Ga0153979_10189531	3300012073	Attine Ant Fungus Gardens	YVYEIVMLSFRRALQISGTLVASLKKSIFLRCNILYFLAVSL*
Ga0153979_10568393	3300012073	Attine Ant Fungus Gardens	YGIVMLSSRRALQISGTLVAGLEKSTFLRRLQASFNILHSLAVSL*
Ga0153971_10318051	3300012076	Attine Ant Fungus Gardens	YHSNHIMFYGIVMLSSRRALQISGTLVAGLEKSTFLKHLQAPFNILHFLAVSL*
Ga0153971_10523491	3300012076	Attine Ant Fungus Gardens	PFQSYYVYGIVMLSSRRALQISSTLVAGLEKSTFLRCLQVPFNTLYSLAVSL*
Ga0154000_10182914	3300012083	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGFEKSTFLRHLQAPFNILHSLAVSL*
Ga0154000_10643222	3300012083	Attine Ant Fungus Gardens	GIVMLSSRRALQISGTLVAGLEKSTFLRHLQASFNILHSLAVSL*
Ga0154000_10820961	3300012083	Attine Ant Fungus Gardens	YVTPEYHSNHIYVYGIVMLSSRRALQISGTLVASLKKSTFLRHLQVPFNILHSLAVSL*
Ga0153934_10183112	3300012084	Attine Ant Fungus Gardens	LQISGTLVASLEKSTSLRYLQALFSILHSLVVSL*
Ga0153949_10635751	3300012086	Attine Ant Fungus Gardens	YYIYGIVILSSKRALQISGTLVAGLKRFTSFKRLQVPFSILHSLAVSL*
Ga0153944_10603261	3300012088	Attine Ant Fungus Gardens	ALQISGTLVAGLERSISFRRLQVPFSILHSLAVSL*
Ga0153955_1017217	3300012095	Attine Ant Fungus Gardens	MLSSKRALQISGTLLAGFEKSTFLRHLQAPFNILHSLAESL*
Ga0154008_1134531	3300012100	Attine Ant Fungus Gardens	RALQISGTLVASLERSISFRYLQAPFSILHFLAVSL*
Ga0153998_10029368	3300012120	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGFEKSIFLRRLQVPFNILYSLAISL*
Ga0153976_10218492	3300012124	Attine Ant Fungus Gardens	YGIVILSSRRALQISGTLVAGLEKSISLRYLQVPFSIFHFLAISL*
Ga0153964_10183232	3300012130	Attine Ant Fungus Gardens	MLSSRRALQISGTLVTGFEKSIFLRRLQVPFNILYSLAISL*
Ga0153994_10254652	3300012131	Attine Ant Fungus Gardens	MLHQILFQSYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRGLQASFSTLYSLAVSL*
Ga0153994_10335431	3300012131	Attine Ant Fungus Gardens	QSYCVYGIVMLSSRRALQISGTLVAGLEKSTFLRHLQASFNILHSLAVSL*
Ga0153982_10061531	3300012135	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGLEKSTFLRHLQAPFKILH
Ga0153982_10205781	3300012135	Attine Ant Fungus Gardens	QSYCVYGIVMLSSRRALQISGTLVAGFEKSTFLRRLQAPFNILHSLAISL*
Ga0153982_10245831	3300012135	Attine Ant Fungus Gardens	ALQISSTLVAGLEKSIFLRHLQVPFNTLHSLAVSL*
Ga0153982_10524902	3300012135	Attine Ant Fungus Gardens	VYGIVMLSSRRALQISGTLVAGLEKSTFLRHLQAPFNILYSLAISL*
Ga0153985_10046671	3300012136	Attine Ant Fungus Gardens	ILFQSYYVYGIVMLSSRRALQISSTLVAGLEKSTFLGYLQTPFNTLHSLAVSL*
Ga0153985_10230731	3300012136	Attine Ant Fungus Gardens	RRVLQISGTLVASLEKSTFLRRLQMPFNILYSLAVSL*
Ga0153985_10391272	3300012136	Attine Ant Fungus Gardens	HIYVYGIVMLSSRRALQISGTLVASLEKSTFLRYLQAPFNILHSLAVSL*
Ga0153985_10559001	3300012136	Attine Ant Fungus Gardens	YGIVMLSSRRALQISGTLVAGLEKSTFLRRLQVSFNILHSLAVSL*
Ga0153961_10211651	3300012139	Attine Ant Fungus Gardens	RRALQISGTLVAGLEKSTFLRHLQAPFKILHSLAVSL*
Ga0153961_10422413	3300012139	Attine Ant Fungus Gardens	FYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQASFNILHSLAVSL*
Ga0153961_10757951	3300012139	Attine Ant Fungus Gardens	QSYCVYGIVMLSSRRALQISGTLVAGLEKSTFLRHLQAPFKILHSLAVSL*
Ga0153958_10072016	3300012141	Attine Ant Fungus Gardens	MLSSRRALQISGTLVADFEKSTFLRHLQVSYNILYSLAISL*
Ga0153958_10153722	3300012141	Attine Ant Fungus Gardens	MLSFRRALQISGTLVAGLEKSTFLRRLQAPFNILHSLAVSL*
Ga0153958_10244481	3300012141	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGFEKSTFLRRLQAPFNILHSLAISL*
Ga0153958_10398671	3300012141	Attine Ant Fungus Gardens	CHYVTPEYHSNHIMFYGIVMLSSRRALQISGTLVAGLEKSIFLKHLQAPFNILHFLAVSL
Ga0153953_10383741	3300012154	Attine Ant Fungus Gardens	YYVYGIVILSSRRALQISSTLVAGLEKSMSLKYLQVPFSILYSLAVSL*
Ga0153939_10637701	3300012162	Attine Ant Fungus Gardens	LSSRRALQISGTLVAGLERSTSFRYLQAPFSILHSLAVSL*
Ga0153990_10014561	3300012169	Attine Ant Fungus Gardens	MLSSRRALQISSTLVAGLEKSTFLGYLQTPFNTLHSLAVSL*
Ga0153990_10509241	3300012169	Attine Ant Fungus Gardens	FQSYYVYGIVMLSSRRALQISGTLVAGFEKSTFLRRLQAPFNILHSLAVSL*
Ga0153990_10523791	3300012169	Attine Ant Fungus Gardens	MLSSRRALQISGTLVAGLEKSTFLRRLQAPFNTLHSLAVSL*
Ga0153990_10694843	3300012169	Attine Ant Fungus Gardens	QSYYVYGIVILSSRRALQISGILVPGLEKSTFLRRLQAPFSTLHSLAVSL*
Ga0153990_10921541	3300012169	Attine Ant Fungus Gardens	LQISGTLVAGLEKSTFLRYLQVPFNTLYSLAVSL*
Ga0153990_11125491	3300012169	Attine Ant Fungus Gardens	YYVYGIVMLSSRRALQISGTLVAGFEKSTFLRCLQAPFNILHSLAVSL*
Ga0153990_11402552	3300012169	Attine Ant Fungus Gardens	GIVMLSSRRALQISGTLVAGLEKSTFLKHLQAPFNILHFLAVSL*
Ga0153943_10410581	3300012177	Attine Ant Fungus Gardens	ALQISGTLVASLERSTSFRHLQMSFSILYSLAVSL*
Ga0153974_10165051	3300012180	Attine Ant Fungus Gardens	MLHQIPFQSYYVYGIVILSSRRALQISSTLVAGLEKSTFLRHLQVPFNTLYSLAVSL*PI
Ga0153928_10541841	3300012677	Attine Ant Fungus Gardens	EIVILSSRRALQISGTLVAGLERSISFRRLQVPFSILHSLAISL*
Ga0157361_10041252	3300012995	Fungus Garden	MLSSRRALQISGTLVAGLEKSTFLKRLQAPFNTLHSLVVSL*
Ga0157361_10077151	3300012995	Fungus Garden	MLSSRRALQISGTLVASFKKSTFLRRLQAPFNILYSLAVSL*
Ga0157361_10151251	3300012995	Fungus Garden	MLSSRRALQISGTLVASLEKSTFLRRLQVPFNTLYSLAVSL*
Ga0157362_100034410	3300012998	Fungus Garden	MLSSRRALQISGTLVASLEKSIFLICLQAPFNILHSLAVSL*
Ga0157362_11803881	3300012998	Fungus Garden	YYVYGIVMLSSRRALQISGTLVAGLEKSTFLRCLQAPFNILYSLVVSL*
Ga0157362_11865312	3300012998	Fungus Garden	IPFQSYCVYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQAPFNILYSLAVSL*
Ga0157362_12586361	3300012998	Fungus Garden	HQILFQSYYIYGIVMLSSRRALQISGTLVADFEKSTFLRHLQVPYNILYSLAISL*
Ga0157360_10045077	3300013000	Fungus Garden	MLSSRRALQISGTLVASLEKSTFLRCLQVPFNTLHSLAISL*
Ga0157360_11595381	3300013000	Fungus Garden	ILFQSYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRCLQAPFNILYSLVVSL*
Ga0157360_11657032	3300013000	Fungus Garden	IPFQSYYVYGIVMLSSRRALQISGTLVAGLEKSTFLRRLQAPFNILHSLAVSL*
Ga0157365_101201591	3300013001	Fungus Garden	YYIYGIVMLSSRRALQISGTLVASLKKSTFLRCLQAPFNILYSLAISL*
Ga0157365_101351041	3300013001	Fungus Garden	ALQISGTLVAGLEKSTFLKCLQALFNILYSLAVSL*
Ga0157365_102751251	3300013001	Fungus Garden	YGIVMLSSRRALQISGTLVAGLEKSTFLRRLQTPFNILHSLAVSL*
Ga0157365_102788961	3300013001	Fungus Garden	VYGIVMLSSRRALQISGTLVAGLEKSTFLRHLQVSFNTLHSLAVSL*
Ga0157364_10786791	3300013002	Fungus Garden	MSSSRRALQISGTLVAGLKKSTFLRRLQVPFNILHSLAVSL*
Ga0157364_11835222	3300013002	Fungus Garden	LYYVYGIVMLSSRRALQISGTLVASFKKFTFLRHLQVPFNILHSLAVSL*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079420

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences