NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079175

Metagenome / Metatranscriptome Family F079175

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079175
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 46 residues
Representative Sequence MGVQPGPVRRSHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGT
Number of Associated Samples 92
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 87.93 %
% of genes near scaffold ends (potentially truncated) 21.55 %
% of genes from short scaffolds (< 2000 bps) 78.45 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.379 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(51.724 % of family members)
Environment Ontology (ENVO) Unclassified
(51.724 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.724 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 27.63%    β-sheet: 0.00%    Coil/Unstructured: 72.37%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF00717Peptidase_S24 15.52
PF01039Carboxyl_trans 6.03
PF00005ABC_tran 5.17
PF07750GcrA 3.45
PF12399BCA_ABC_TP_C 2.59
PF02785Biotin_carb_C 1.72
PF02604PhdYeFM_antitox 0.86
PF13738Pyr_redox_3 0.86
PF02653BPD_transp_2 0.86
PF10116Host_attach 0.86
PF06114Peptidase_M78 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 6.03
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 6.03
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 6.03
COG5352Uncharacterized conserved proteinFunction unknown [S] 3.45
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.86
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.86


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.38 %
UnclassifiedrootN/A8.62 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908043|A2_c1_ConsensusfromContig25254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1307Open in IMG/M
2124908044|A5_c1_ConsensusfromContig68979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1434Open in IMG/M
3300000908|JGI11915J12861_104733All Organisms → cellular organisms → Bacteria → Proteobacteria523Open in IMG/M
3300005994|Ga0066789_10291009All Organisms → cellular organisms → Bacteria → Proteobacteria683Open in IMG/M
3300005995|Ga0066790_10529862All Organisms → cellular organisms → Bacteria → Proteobacteria504Open in IMG/M
3300006041|Ga0075023_100063383All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1193Open in IMG/M
3300006047|Ga0075024_100286565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae803Open in IMG/M
3300006050|Ga0075028_100175692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1145Open in IMG/M
3300006050|Ga0075028_100176986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1140Open in IMG/M
3300006050|Ga0075028_100469181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas730Open in IMG/M
3300006057|Ga0075026_100182246All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1095Open in IMG/M
3300006172|Ga0075018_10007620All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3921Open in IMG/M
3300007255|Ga0099791_10334752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae724Open in IMG/M
3300007255|Ga0099791_10400211All Organisms → cellular organisms → Bacteria → Proteobacteria661Open in IMG/M
3300007258|Ga0099793_10106521All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1301Open in IMG/M
3300007258|Ga0099793_10255314All Organisms → cellular organisms → Bacteria → Proteobacteria847Open in IMG/M
3300007265|Ga0099794_10031377All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2487Open in IMG/M
3300007265|Ga0099794_10212591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae992Open in IMG/M
3300009038|Ga0099829_10022494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4351Open in IMG/M
3300009088|Ga0099830_10472677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1020Open in IMG/M
3300009089|Ga0099828_10255960All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1571Open in IMG/M
3300009090|Ga0099827_10443381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1112Open in IMG/M
3300009143|Ga0099792_10031453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2461Open in IMG/M
3300009143|Ga0099792_10034154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2379Open in IMG/M
3300010877|Ga0126356_11060048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3926Open in IMG/M
3300011269|Ga0137392_10053793All Organisms → cellular organisms → Bacteria → Proteobacteria3038Open in IMG/M
3300011444|Ga0137463_1198544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei752Open in IMG/M
3300012096|Ga0137389_10507509All Organisms → cellular organisms → Bacteria → Proteobacteria1035Open in IMG/M
3300012189|Ga0137388_10224564Not Available1701Open in IMG/M
3300012189|Ga0137388_10641709All Organisms → cellular organisms → Bacteria → Proteobacteria987Open in IMG/M
3300012189|Ga0137388_11302262All Organisms → cellular organisms → Bacteria → Proteobacteria665Open in IMG/M
3300012198|Ga0137364_10000280All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium19376Open in IMG/M
3300012198|Ga0137364_10241734All Organisms → cellular organisms → Bacteria → Proteobacteria1332Open in IMG/M
3300012200|Ga0137382_10388219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis983Open in IMG/M
3300012201|Ga0137365_10236872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1360Open in IMG/M
3300012202|Ga0137363_11578512Not Available548Open in IMG/M
3300012203|Ga0137399_10036929All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense3431Open in IMG/M
3300012205|Ga0137362_10020235All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei5111Open in IMG/M
3300012207|Ga0137381_10197302All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1743Open in IMG/M
3300012209|Ga0137379_10053814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense3873Open in IMG/M
3300012209|Ga0137379_11487533Not Available578Open in IMG/M
3300012210|Ga0137378_10550554All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300012211|Ga0137377_10000882All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium19749Open in IMG/M
3300012351|Ga0137386_10156377All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1631Open in IMG/M
3300012351|Ga0137386_10269331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1225Open in IMG/M
3300012359|Ga0137385_10307682All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1363Open in IMG/M
3300012359|Ga0137385_11452231Not Available549Open in IMG/M
3300012362|Ga0137361_10263436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1572Open in IMG/M
3300012582|Ga0137358_10238025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1240Open in IMG/M
3300012683|Ga0137398_10080231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2011Open in IMG/M
3300012685|Ga0137397_10024652All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4257Open in IMG/M
3300012685|Ga0137397_10212441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1440Open in IMG/M
3300012918|Ga0137396_10164710All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1620Open in IMG/M
3300012922|Ga0137394_10017985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5627Open in IMG/M
3300012929|Ga0137404_10240888All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1549Open in IMG/M
3300012929|Ga0137404_10348690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1295Open in IMG/M
3300012930|Ga0137407_10509925All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1124Open in IMG/M
3300012930|Ga0137407_12019642All Organisms → cellular organisms → Bacteria → Proteobacteria550Open in IMG/M
3300012944|Ga0137410_11934280Not Available523Open in IMG/M
3300015264|Ga0137403_10575745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae992Open in IMG/M
3300018027|Ga0184605_10108983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1226Open in IMG/M
3300018028|Ga0184608_10025511All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2186Open in IMG/M
3300018051|Ga0184620_10073307All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1012Open in IMG/M
3300018066|Ga0184617_1124408All Organisms → cellular organisms → Bacteria → Proteobacteria739Open in IMG/M
3300018071|Ga0184618_10312574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria670Open in IMG/M
3300018075|Ga0184632_10199665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae880Open in IMG/M
3300018075|Ga0184632_10331872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria655Open in IMG/M
3300018075|Ga0184632_10347493All Organisms → cellular organisms → Bacteria → Proteobacteria635Open in IMG/M
3300018081|Ga0184625_10293244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae850Open in IMG/M
3300019789|Ga0137408_1223192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1826Open in IMG/M
3300019789|Ga0137408_1291847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1723Open in IMG/M
3300019866|Ga0193756_1046930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria595Open in IMG/M
3300019867|Ga0193704_1049593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium823Open in IMG/M
3300019872|Ga0193754_1022556All Organisms → cellular organisms → Bacteria → Proteobacteria678Open in IMG/M
3300019874|Ga0193744_1002863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3167Open in IMG/M
3300019875|Ga0193701_1107105Not Available514Open in IMG/M
3300019881|Ga0193707_1080729All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium997Open in IMG/M
3300019886|Ga0193727_1003476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium6562Open in IMG/M
3300020004|Ga0193755_1117661All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae830Open in IMG/M
3300020170|Ga0179594_10289062All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria620Open in IMG/M
3300021073|Ga0210378_10309520All Organisms → cellular organisms → Bacteria → Proteobacteria593Open in IMG/M
3300021080|Ga0210382_10043847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1736Open in IMG/M
3300024288|Ga0179589_10205112All Organisms → cellular organisms → Bacteria → Proteobacteria863Open in IMG/M
3300026304|Ga0209240_1110452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria964Open in IMG/M
3300026475|Ga0257147_1073840All Organisms → cellular organisms → Bacteria → Proteobacteria524Open in IMG/M
3300026508|Ga0257161_1118057All Organisms → cellular organisms → Bacteria → Proteobacteria555Open in IMG/M
3300026551|Ga0209648_10541232Not Available654Open in IMG/M
3300027181|Ga0208997_1016634All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1018Open in IMG/M
3300027381|Ga0208983_1019748All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1315Open in IMG/M
3300027388|Ga0208995_1046486Not Available764Open in IMG/M
3300027512|Ga0209179_1040176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae983Open in IMG/M
3300027633|Ga0208988_1154542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium550Open in IMG/M
3300027643|Ga0209076_1187756All Organisms → cellular organisms → Bacteria → Proteobacteria570Open in IMG/M
3300027671|Ga0209588_1005869All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3538Open in IMG/M
3300027671|Ga0209588_1015924All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2316Open in IMG/M
3300027738|Ga0208989_10009041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3392Open in IMG/M
3300027846|Ga0209180_10131349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1438Open in IMG/M
3300027862|Ga0209701_10478838All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei680Open in IMG/M
3300027862|Ga0209701_10730915Not Available506Open in IMG/M
3300027894|Ga0209068_10661226All Organisms → cellular organisms → Bacteria → Proteobacteria611Open in IMG/M
3300027910|Ga0209583_10047207All Organisms → cellular organisms → Bacteria → Proteobacteria1503Open in IMG/M
3300028536|Ga0137415_10069067All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae3397Open in IMG/M
3300028536|Ga0137415_10091686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi2895Open in IMG/M
3300028536|Ga0137415_10685574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria837Open in IMG/M
3300028792|Ga0307504_10030114All Organisms → cellular organisms → Bacteria → Proteobacteria1429Open in IMG/M
3300028793|Ga0307299_10225015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae705Open in IMG/M
3300028814|Ga0307302_10154538All Organisms → cellular organisms → Bacteria → Proteobacteria1112Open in IMG/M
3300028824|Ga0307310_10259961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei836Open in IMG/M
3300028828|Ga0307312_10685885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae678Open in IMG/M
3300028828|Ga0307312_10822888Not Available615Open in IMG/M
3300028881|Ga0307277_10365391All Organisms → cellular organisms → Bacteria → Proteobacteria643Open in IMG/M
3300029987|Ga0311334_10262393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1339Open in IMG/M
3300031507|Ga0307509_10446660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae988Open in IMG/M
3300031616|Ga0307508_10078015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2892Open in IMG/M
3300033180|Ga0307510_10090253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2912Open in IMG/M
3300033180|Ga0307510_10355798All Organisms → cellular organisms → Bacteria → Proteobacteria914Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil51.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.93%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.76%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds7.76%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.17%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza3.45%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.72%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.86%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.86%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908043Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2EnvironmentalOpen in IMG/M
2124908044Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5EnvironmentalOpen in IMG/M
3300000908Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300019872Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026475Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-AEnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300029987I_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2_c1_002290002124908043SoilMMDMRPGLVRRAHQTERLTPSPIILPAEAIAVTLLILVVALGLTIR
A5_c1_018415502124908044SoilMDLQPGPGRRSHRAESPTPSPIILPAEAIAVMLLILVLALGLMIRSGT
JGI11915J12861_10473313300000908Forest SoilMDMRPGLVRRARQAERLTPSSIIPRAEAIAVTLLILVVALGVMIRSG
Ga0066789_1029100933300005994SoilMNMRPGLVRRAHQTERLTPSPIILPAEAIAVTLLILVVALGLTIRS
Ga0066790_1052986213300005995SoilMRPGLVRRAHQTERLTPSPIILPTEAIAVTLLILVVALGLTIRS
Ga0075023_10006338333300006041WatershedsMDVHSGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGA*
Ga0075024_10028656523300006047WatershedsMDIRPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGA*
Ga0075028_10017569233300006050WatershedsMDAHPEPVRRAHRAEPLTPSPIILPVEAIAVMLLILVLALGLMIRSGT*
Ga0075028_10017698643300006050WatershedsRAEPLTPSPIILPVEAIAVMLLILVLALGLMIRSGA*
Ga0075028_10046918133300006050WatershedsGTVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGA*
Ga0075026_10018224633300006057WatershedsMDIRPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGK*
Ga0075018_1000762033300006172WatershedsMDVHPGTVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGA*
Ga0099791_1033475213300007255Vadose Zone SoilMDLQPGPVRRSHRAEPLTPSPIILSAEAIAVMFLILVRALGLTIRSGE*
Ga0099791_1040021123300007255Vadose Zone SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLTLGLMIRSGT*
Ga0099793_1010652123300007258Vadose Zone SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAITVMLLILVLALGLMVRSGT*
Ga0099793_1025531423300007258Vadose Zone SoilMEVRPGPVRRSHRAEPLTPSPIILPAEAMVVMLLIFILALGLLIRNGA*
Ga0099794_1003137723300007265Vadose Zone SoilMDLQPGPVRRSHRAKPLTPSPIILPAEAIAMMLLIFVLALGLMVRSGA*
Ga0099794_1021259123300007265Vadose Zone SoilMDVQSGLVRRSPRVEPLTPSPVILPAEAIAVTLLIFVLVLGVLIRIGL*
Ga0099829_1002249453300009038Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSGT*
Ga0099830_1047267723300009088Vadose Zone SoilMDVHRRLVRGLHRAEPLTPSPIILPAEAIAVTLLIFILALGVMLRGGA*
Ga0099828_1025596023300009089Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRRGT*
Ga0099827_1044338123300009090Vadose Zone SoilMDVHPGPVRGAHRAEPLTPSPIILPAEAVAVMLLILVLALGLMVRSGT*
Ga0099792_1003145323300009143Vadose Zone SoilMDVQPGPVRRSHRAEPLTPSSSPLILPAEALVVALLIFVLALGLMVRSGT*
Ga0099792_1003415433300009143Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAVAVMFLILVLALGLMIRSGT*
Ga0126356_1106004813300010877Boreal Forest SoilMDLQPGPVRRSHRAEPLTPSPIILPAEAIAVMLLIIVLALGLTIRSGT*
Ga0137392_1005379333300011269Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMVRSGT*
Ga0137463_119854413300011444SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAIAVMLLI
Ga0137389_1050750933300012096Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGT*
Ga0137388_1022456423300012189Vadose Zone SoilMDLQPGPVRRSHRAEPLTPSPIILPAEAIAMMLLIFVLALGLMVRSGA*
Ga0137388_1064170923300012189Vadose Zone SoilMDAHPEPVRRAHRAEPLTPSPIILPVEAIAVMLLILVLALGLMIRSGK*
Ga0137388_1130226223300012189Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRRGT*
Ga0137364_1000028023300012198Vadose Zone SoilMDAQRGFVRSTRRAKPLTPSPVILPAEALAVMLLIVVVTLGLMTRSGA*
Ga0137364_1024173433300012198Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSST*
Ga0137382_1038821923300012200Vadose Zone SoilMGVQPGPVRRSHRAEHLTPSPITLPAEAVAVMLLILVLALGLMIRSGS*
Ga0137365_1023687243300012201Vadose Zone SoilMDMQPGSVRSSHRAAPQAPAPIILPAEAIAVTLLIIVLALGVMIGSSA*
Ga0137363_1157851223300012202Vadose Zone SoilMDVHPGPVRGAHRAEPLTPCPIILPAEAIAVMLLILVLTLGLMIRSGT*
Ga0137399_1003692913300012203Vadose Zone SoilMDMRPGLVRRAHQIERLTPSPIIPPAEAIAVTLLILVVALGLTIRS*
Ga0137362_1002023533300012205Vadose Zone SoilMDPGPVRGAHRAEPLTTSPIILPAEAIAVMLLILVLTLGLMIRSGT*
Ga0137381_1019730243300012207Vadose Zone SoilSVRRSHRAAPQAPFPIILPAEAIAVTLLIIMLALGVMIRSST*
Ga0137379_1005381483300012209Vadose Zone SoilMGGQPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSDT*
Ga0137379_1148753323300012209Vadose Zone SoilMDMQPGSVRSSHRAAPQAPFPIILPAEAIAVTLLIIVLALGVMIRSSA*
Ga0137378_1055055413300012210Vadose Zone SoilRAAPQAPAPIILPAEAIAVTLLIIVLALGVMIGSSA*
Ga0137377_10000882233300012211Vadose Zone SoilMDAQRGLVRSTRRAKPLTPSPVILPAEALAVMLLIVVVTLGLMTRSGA*
Ga0137386_1015637733300012351Vadose Zone SoilMDMQPGSVRRSHRAAPQAPFPIILPAEAIAVTLLIIMLALGVMIRSSA*
Ga0137386_1026933123300012351Vadose Zone SoilMGGQPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSST*
Ga0137385_1030768233300012359Vadose Zone SoilMGVHPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMVRSGT*
Ga0137385_1145223123300012359Vadose Zone SoilRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSGT*
Ga0137361_1026343633300012362Vadose Zone SoilMDPGPVRGAHRAEPLTPCPIILPAEAIAVMLLILVLTLGLMIRSGT*
Ga0137358_1023802523300012582Vadose Zone SoilMEVRPGPVRRSHRAEPLTPSPIILPAEAMVVMLLVFILALGLLIRNGA*
Ga0137398_1008023123300012683Vadose Zone SoilMDMRPGLVRRAHQIERLTPSPIIPPAEAIAVTLLILVVARLA*
Ga0137397_1002465223300012685Vadose Zone SoilMDAQSGLVRRSPRVTPSPIILPAEAIAVTLLIFVLALGVMIRSGA*
Ga0137397_1021244143300012685Vadose Zone SoilEPLTPSPIILPAEAIAVMLLIIVLALGLTIRSGT*
Ga0137396_1016471023300012918Vadose Zone SoilMDVQSGLVRRSPRVEPLTPSPIILPAEAIAVTLLIFVLALGVMIRSGA*
Ga0137394_1001798563300012922Vadose Zone SoilMDAQSGLVRRSPRVEPLTPSPIILPAEAIAVTLLIFVLALGVMIRSGA*
Ga0137404_1024088833300012929Vadose Zone SoilMDLQPGPVRRSHRAEPLTPSPIILPAEAIAMMLLIFVLALGLMVRSGT*
Ga0137404_1034869023300012929Vadose Zone SoilMGVQSGPVRRSHRAEPLTLSPIILPAEAVAVMLLILVLALGLMIRSGT*
Ga0137407_1050992523300012930Vadose Zone SoilMGVQSGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSGT*
Ga0137407_1201964213300012930Vadose Zone SoilMGVQPGPVRRSHRAELLTPSPIILPAEAVAVMLLILVLALGLMIRSGT*
Ga0137410_1193428023300012944Vadose Zone SoilMDMQSGLIRRSHRAEPPTPFPIILPAEAIAVALLIVILVLGLMIRSGA*
Ga0137403_1057574523300015264Vadose Zone SoilMDLQPGPVRRSHRAEPLTPSPIILPAEAITMMLLIFVLALGLMVRSGT*
Ga0184605_1010898323300018027Groundwater SedimentMGVQPGPVRRSHRAEPLTPSPIILPAEAVAVMFLILVLALGLMIRSGT
Ga0184608_1002551113300018028Groundwater SedimentMDVHPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMVRNGT
Ga0184620_1007330733300018051Groundwater SedimentMDVHPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGT
Ga0184617_112440833300018066Groundwater SedimentMDLHPGPVRGAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGT
Ga0184618_1031257423300018071Groundwater SedimentRSHRAEPLTPSPIILPAEAVAVMFLILVLALGLMIRSGT
Ga0184632_1019966523300018075Groundwater SedimentMDVQPGPVRRSHRAEPLTPSPIILPVEAIAVMLLILVLAFGLMIRGGA
Ga0184632_1033187223300018075Groundwater SedimentGPVRRSHRAEPLTPSPIILPVEAIAVMLLILVLALGLMVRSGT
Ga0184632_1034749333300018075Groundwater SedimentMDVQPGPVRRSHRAEPLTPSPIILPVEAIAVMLLILVLALGL
Ga0184625_1029324423300018081Groundwater SedimentMDVQPGPVRRSHRAESLTPSPIILPAEAIAVMLLILVLALGLMIRSGT
Ga0137408_122319213300019789Vadose Zone SoilMGVQSGPVRRSHRAEPLTLSPIILPAEAVAVMLLILVLALGLMIRSGT
Ga0137408_129184713300019789Vadose Zone SoilMDLQPGPVRRSHRAEPLTPSPIILPAEAIAMMLLIFVLALGLMVRSGT
Ga0193756_104693023300019866SoilRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGT
Ga0193704_104959333300019867SoilMNIRPGPVRRAHRAEPLTPSAIILPAEAIAVMLLILVLALGLMIRSGT
Ga0193754_102255613300019872SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLTLGLMIRSGT
Ga0193744_100286333300019874SoilMDVQPGPVRRAHRAEPLTPSPIILPVEAIAVMLLILVLALGLMIRSGT
Ga0193701_110710523300019875SoilDLHPGPVRGAHRAEPLTPSPIILPAEAVAVMLLILVLALGLMVRNGT
Ga0193707_108072913300019881SoilMNIRPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGT
Ga0193727_100347623300019886SoilMDVQPGPVRRAHRAEPLTPSPIILPVETIAVMLLILVLALGLMIRSGT
Ga0193755_111766123300020004SoilMDVQSGLVRRSPRVEPLTPSPIILPAEAIAVTLLIFVLALGVMIRSGA
Ga0179594_1028906213300020170Vadose Zone SoilGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSGT
Ga0210378_1030952013300021073Groundwater SedimentMNIRPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMVRNGT
Ga0210382_1004384733300021080Groundwater SedimentMGVQPGPVRRSHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGT
Ga0179589_1020511223300024288Vadose Zone SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAIAVTLLIFVLALGVMIRSGA
Ga0209240_111045233300026304Grasslands SoilMDAQSGLVRRSPRVEPLTPSPIILPAEAIAVTLLIFVLALGVMIRSGA
Ga0257147_107384013300026475SoilMDMRPGLVRRAHQAERLTPSPIILPAEAIAVMLLI
Ga0257161_111805713300026508SoilMDMRAGLGRAHQAERPTPSPIILPAEAIAVTLLILVVALGVMIRSGMTP
Ga0209648_1054123213300026551Grasslands SoilAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSGT
Ga0208997_101663423300027181Forest SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAIAVMFLILVLALGLMIRSGT
Ga0208983_101974833300027381Forest SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAIAVMLLIIVLALGLTIRSGT
Ga0208995_104648623300027388Forest SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSGT
Ga0209179_104017623300027512Vadose Zone SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAVAVMLLILVLALALMIRSGT
Ga0208988_115454223300027633Forest SoilMEVRPGPVRRSHRAEPLTPSPIILPAEAMVVMLLIFILALGLLIRNGA
Ga0209076_118775613300027643Vadose Zone SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAITVMLLILVL
Ga0209588_100586933300027671Vadose Zone SoilMDLQPGPVRRSHRAKPLTPSPIILPAEAIAMMLLIFVLALGLMVRSGA
Ga0209588_101592423300027671Vadose Zone SoilMDVHPGPVRRAHRAEPLTPSPIILPAEAITVMLLILVLALGLMVRSGT
Ga0208989_1000904163300027738Forest SoilMGVQPGPVRRSHLAEPLTPSPIILPAEAVAVMLLILVLALGLMIRSGT
Ga0209180_1013134923300027846Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAVAVMLLILVLALGLMVRSGT
Ga0209701_1047883813300027862Vadose Zone SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAIAVMLLILV
Ga0209701_1073091513300027862Vadose Zone SoilRGLHRAEPLTPSPIILPAEAIAVTLLIFILALGVMLRGGA
Ga0209068_1066122613300027894WatershedsMDVHPGTVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGA
Ga0209583_1004720733300027910WatershedsMDVHSGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGA
Ga0137415_1006906763300028536Vadose Zone SoilMDAQSGLVRRSPRVTPSPIILPAEAIAVTLLIFVLALGVMIRSGA
Ga0137415_1009168643300028536Vadose Zone SoilMDMRPGLVRRAHQIERLTPSPIIPPAEAIAVTLLILVVARLA
Ga0137415_1068557433300028536Vadose Zone SoilMDVQPGPVRRSHRAEPLTPSPSPIILPAEAMVVTLLIFVLALGLMIRSTA
Ga0307504_1003011423300028792SoilMDIRPGPVRRAHRTEPLTPSPIILPAEAIAVMLLILVLALGLMIRSGT
Ga0307299_1022501523300028793SoilMGVQPGPFRRSHRAEPLTPSPIILPAEAVAVMFLILVLALGLMIRSGT
Ga0307302_1015453823300028814SoilMGVQPGPVRRSHRAEPLTPSPIILPAEAIAVMLLILVLALGLMVRNGT
Ga0307310_1025996133300028824SoilMDVQPGPVRRAHRAEPLTPSPIILPAEAVAVMFLILVLALGLMIRSGT
Ga0307312_1068588513300028828SoilMNIRPGPVRRAHRAEPLTPSPIILPAEAIAVMLLILVLALVLMIRSGT
Ga0307312_1082288823300028828SoilMDVHPGPVRRAHRTEPLTPSPIILPAEAIAVMLLILVLALGLMVRNGT
Ga0307277_1036539123300028881SoilMGVQPGPVRRSHRAEPLTPTPIILPAEAVAVMFLILVLALGLMIRSGT
Ga0311334_1026239333300029987FenMDVQPRLVRRPHQAEPLTPSPVILPAEAIAVTLLIFILALGVMIRSGA
Ga0307509_1044666023300031507EctomycorrhizaMEVPPEPVHWSDCREPLTPYPIILPAEAMAVTLLILVLALGLMLRNGA
Ga0307508_1007801533300031616EctomycorrhizaMDVRRGSVHRVHRAEPLMPSSIILAAEALAVTLLIFILVLGLMIRTGA
Ga0307510_1009025343300033180EctomycorrhizaMEVPPEPVRWSDCREPLTPYPIILPAEAMAVTLLILVLALGLMLRNGA
Ga0307510_1035579823300033180EctomycorrhizaMDIRPGPVRRAHRAEPLTPSPIILPAEAITVMLLILVLALGLMVRSGT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.