Metagenome / Metatranscriptome Family F079153

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079153
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	119 residues
Representative Sequence	MTTPHRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR
Number of Associated Samples	93
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.31 %
% of genes near scaffold ends (potentially truncated)	36.21 %
% of genes from short scaffolds (< 2000 bps)	75.86 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (95.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock (28.448 % of family members)
Environment Ontology (ENVO)	Unclassified (29.310 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.655 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.45% β-sheet: 16.78% Coil/Unstructured: 65.77%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF01695	IstB_IS21	53.45
PF00665	rve	4.31
PF13005	zf-IS66	0.86
PF03824	NicO	0.86
PF13374	TPR_10	0.86
PF13701	DDE_Tnp_1_4	0.86
PF13384	HTH_23	0.86
PF02899	Phage_int_SAM_1	0.86
PF08281	Sigma70_r4_2	0.86
PF13276	HTH_21	0.86
PF00589	Phage_integrase	0.86
PF03050	DDE_Tnp_IS66	0.86
PF00561	Abhydrolase_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	53.45
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	4.31
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	4.31
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	4.31
COG4584	Transposase	Mobilome: prophages, transposons [X]	4.31
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.86
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.86
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.10 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93.10 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	64.66 %
Unclassified	root	N/A	4.31 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.86 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	49.14 %
Unclassified	root	N/A	4.31 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.86 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.86 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	41.38 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	7.76 %
Unclassified	root	N/A	4.31 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.86 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	41.38 %
Unclassified	root	N/A	4.31 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.72 %
Ferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.86 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	41.38 %
Unclassified	root	N/A	4.31 %
Ferrimicrobium acidiphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	0.86 %
Nocardia neocaledoniensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia neocaledoniensis	0.86 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908029\|A2_v1_NODE_776_len_2062_cov_7_827352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2112	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig22494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2125	Open in IMG/M
3300004081\|Ga0063454_100220301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1102	Open in IMG/M
3300004479\|Ga0062595_100539039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	889	Open in IMG/M
3300005162\|Ga0066814_10001857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1830	Open in IMG/M
3300005165\|Ga0066869_10003168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1934	Open in IMG/M
3300005168\|Ga0066809_10180112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300005434\|Ga0070709_10234940	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300006028\|Ga0070717_10661282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300006055\|Ga0097691_1080047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300006172\|Ga0075018_10665821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	560	Open in IMG/M
3300006173\|Ga0070716_100197821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300006603\|Ga0074064_11816822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	513	Open in IMG/M
3300006619\|Ga0075529_1009820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300006642\|Ga0075521_10142592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1120	Open in IMG/M
3300006795\|Ga0075520_1111964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1226	Open in IMG/M
3300006972\|Ga0075518_1081859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300009094\|Ga0111539_11195203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	883	Open in IMG/M
3300009156\|Ga0111538_11959506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	737	Open in IMG/M
3300009686\|Ga0123338_10138910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1190	Open in IMG/M
3300010036\|Ga0126305_10674277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	698	Open in IMG/M
3300010166\|Ga0126306_10755760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300011106\|Ga0151489_1420385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	722	Open in IMG/M
3300011107\|Ga0151490_1372731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	577	Open in IMG/M
3300012091\|Ga0136625_1005689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4615	Open in IMG/M
3300012680\|Ga0136612_10450108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	653	Open in IMG/M
3300012681\|Ga0136613_10131995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1426	Open in IMG/M
3300012925\|Ga0137419_11338001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	603	Open in IMG/M
3300012957\|Ga0164303_10190789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1125	Open in IMG/M
3300012958\|Ga0164299_11195896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	575	Open in IMG/M
3300012984\|Ga0164309_11329569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300013027\|Ga0170683_10006827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3660	Open in IMG/M
3300014498\|Ga0182019_11258036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300015162\|Ga0167653_1004827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2942	Open in IMG/M
3300015371\|Ga0132258_10407513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3379	Open in IMG/M
3300015372\|Ga0132256_100631192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1186	Open in IMG/M
3300015373\|Ga0132257_100867706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300017944\|Ga0187786_10459434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	567	Open in IMG/M
3300018064\|Ga0187773_10039390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2123	Open in IMG/M
3300018422\|Ga0190265_10371533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1521	Open in IMG/M
3300018432\|Ga0190275_10436689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1328	Open in IMG/M
3300018466\|Ga0190268_10915044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300018466\|Ga0190268_12018880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	531	Open in IMG/M
3300018469\|Ga0190270_10382184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1295	Open in IMG/M
3300019377\|Ga0190264_11918647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300022561\|Ga0212090_10064272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3777	Open in IMG/M
3300022561\|Ga0212090_10079131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	3277	Open in IMG/M
3300025153\|Ga0209512_1031733	All Organisms → cellular organisms → Bacteria	3012	Open in IMG/M
3300025457\|Ga0208850_1045636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	732	Open in IMG/M
3300025474\|Ga0208479_1051499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	813	Open in IMG/M
3300025481\|Ga0208079_1084031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	620	Open in IMG/M
3300025484\|Ga0208587_1023505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1867	Open in IMG/M
3300025581\|Ga0208355_1089047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	670	Open in IMG/M
3300025750\|Ga0209747_1189546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	629	Open in IMG/M
3300025854\|Ga0209176_10053603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	899	Open in IMG/M
3300025878\|Ga0209584_10009986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	3122	Open in IMG/M
3300025908\|Ga0207643_10477783	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300025939\|Ga0207665_10159955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1619	Open in IMG/M
3300026995\|Ga0208761_1020895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	623	Open in IMG/M
3300028743\|Ga0302262_10116977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	914	Open in IMG/M
3300028770\|Ga0302258_1172043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	535	Open in IMG/M
3300028792\|Ga0307504_10339710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	576	Open in IMG/M
3300028861\|Ga0302259_1123585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	637	Open in IMG/M
3300028861\|Ga0302259_1162716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	556	Open in IMG/M
3300028865\|Ga0302291_10084412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1049	Open in IMG/M
3300029923\|Ga0311347_10052044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2583	Open in IMG/M
3300029987\|Ga0311334_11687453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	539	Open in IMG/M
3300030010\|Ga0302299_10309998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	820	Open in IMG/M
3300030114\|Ga0311333_10447991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1051	Open in IMG/M
3300030838\|Ga0311335_11236445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	536	Open in IMG/M
3300030943\|Ga0311366_10483710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1077	Open in IMG/M
3300031447\|Ga0272435_1010356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5656	Open in IMG/M
3300031447\|Ga0272435_1014382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4392	Open in IMG/M
3300031447\|Ga0272435_1022744	Not Available	3093	Open in IMG/M
3300031448\|Ga0272438_1098879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1639	Open in IMG/M
3300031449\|Ga0272429_1047501	Not Available	3393	Open in IMG/M
3300031449\|Ga0272429_1133491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1260	Open in IMG/M
3300031449\|Ga0272429_1228801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	699	Open in IMG/M
3300031449\|Ga0272429_1288282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	533	Open in IMG/M
3300031451\|Ga0272426_1162934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	754	Open in IMG/M
3300031452\|Ga0272422_1032336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3187	Open in IMG/M
3300031452\|Ga0272422_1115338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	997	Open in IMG/M
3300031453\|Ga0272425_1022025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4481	Open in IMG/M
3300031453\|Ga0272425_1057325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2097	Open in IMG/M
3300031453\|Ga0272425_1079077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1629	Open in IMG/M
3300031460\|Ga0272430_1007865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13883	Open in IMG/M
3300031460\|Ga0272430_1042312	Not Available	3199	Open in IMG/M
3300031460\|Ga0272430_1099181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1330	Open in IMG/M
3300031470\|Ga0272432_1191754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	824	Open in IMG/M
3300031471\|Ga0272439_1142121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1278	Open in IMG/M
3300031472\|Ga0272437_1277583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300031472\|Ga0272437_1421212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	547	Open in IMG/M
3300031520\|Ga0272428_1021270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6755	Open in IMG/M
3300031520\|Ga0272428_1054795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3074	Open in IMG/M
3300031520\|Ga0272428_1060518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2824	Open in IMG/M
3300031520\|Ga0272428_1370403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300031548\|Ga0307408_101316501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	678	Open in IMG/M
3300031852\|Ga0307410_11823935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	541	Open in IMG/M
3300031938\|Ga0308175_101235705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300031939\|Ga0308174_11157029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300032002\|Ga0307416_103764109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia neocaledoniensis	508	Open in IMG/M
3300032770\|Ga0335085_11579682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	680	Open in IMG/M
3300033168\|Ga0272423_1011446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7331	Open in IMG/M
3300033168\|Ga0272423_1210728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	809	Open in IMG/M
3300033168\|Ga0272423_1323253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	524	Open in IMG/M
3300033181\|Ga0272431_10030490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4788	Open in IMG/M
3300033181\|Ga0272431_10164725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1346	Open in IMG/M
3300033181\|Ga0272431_10178282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1261	Open in IMG/M
3300033181\|Ga0272431_10252706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	934	Open in IMG/M
3300033181\|Ga0272431_10361106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	673	Open in IMG/M
3300033806\|Ga0314865_082985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	836	Open in IMG/M
3300033808\|Ga0314867_010141	Not Available	2208	Open in IMG/M
3300034025\|Ga0334940_072415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300034268\|Ga0372943_0066336	Not Available	2053	Open in IMG/M
3300034818\|Ga0373950_0069068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	721	Open in IMG/M
3300034820\|Ga0373959_0172691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.52%
Host-Associated	Host-Associated	9.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.62%
Plants	Host-Associated → Plants	9.48%
Aquatic	Environmental → Aquatic	6.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.83%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	28.45%
Peat	Environmental → Terrestrial → Peat	9.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.90%
Freshwater	Environmental → Aquatic → Freshwater	6.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.59%
Sediment	Environmental → Aquatic → Sediment	0.86%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.48%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	28.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.48%
Ice	Environmental → Aquatic → Freshwater → Ice	6.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.17%
Loam	Environmental → Terrestrial → Soil → Loam	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	28.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.10%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	12.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.31%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.59%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	28.45%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	11.21%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.03%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.86%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.86%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908029	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006619	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-4B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006972	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-A	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009686	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013027	Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Monturaqui	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300025153	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - frozenSSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028861	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031447	Rock endolithic microbial communities from Victoria Land, Antarctica - Ricker Hills nord	Environmental	Open in IMG/M
3300031448	Rock endolithic microbial communities from Victoria Land, Antarctica - Knobhead nord	Environmental	Open in IMG/M
3300031449	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt sud	Environmental	Open in IMG/M
3300031451	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak nord	Environmental	Open in IMG/M
3300031452	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand nord	Environmental	Open in IMG/M
3300031453	Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte sud	Environmental	Open in IMG/M
3300031460	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace nord	Environmental	Open in IMG/M
3300031470	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley nord	Environmental	Open in IMG/M
3300031471	Rock endolithic microbial communities from Victoria Land, Antarctica - Knobhead sud	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033168	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand sud	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_v1_00018040	2124908029	Soil	MTAGPVSLPKETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCLAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR
A2_c1_00582700	2124908043	Soil	MTAGPVSLPNETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR
Ga0063454_1002203012	3300004081	Soil	MTAPDRLSAQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR*
Ga0062595_1005390392	3300004479	Soil	MTDNDGRDDAITSRHETRHETRCAWPGCPNPVPRNPRGRPRIYCTPACRAAAYRYHHPDTRAPLQVEIDHGSTSSRGRPAGHVWLVRLRRGSHHV
Ga0066814_100018572	3300005162	Soil	MTTPHRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR*
Ga0066869_100031683	3300005165	Soil	MTTPHRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPTQTR*
Ga0066809_101801121	3300005168	Soil	MTTPHRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPL
Ga0070709_102349403	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTAPDRLSSRNENRCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREIIDPPPLAAPDQTR*
Ga0070717_106612822	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTDDTDTNFSSRHETRCARPGCLNPVPRNPRGRPRIYCTPACRTAAHRHDHPDARQPLHVEVDHGSTSSRGRPAGHIWLVRLRRGPHQVTLAVGLGRPSAEHLAHQIRNVINPPPLASPTQTR*
Ga0097691_10800472	3300006055	Arctic Peat Soil	VSAARVSSPNETPGAGGCARPGCPQPVVRNAVGRPRLYCSPACRTEAYRQAHPASREPLIVEVDHGSTSSKGRPAGQVWLVRLRRGPHQAVLAIGLGKPSADYLASQIRDVIDPPPLATPARIR*
Ga0075018_106658212	3300006172	Watersheds	HETRCARPGCPNPVPRNPRGRPRIYCTPACRAAAHRAHHPDTRAPLQVEVDHGSTSSKGRPAGQVWLVRLRRGSHHVTLAIGLGRPSAEHLARQIREVINPQPLATPPAIR*
Ga0070716_1001978211	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTAPDRLSSRNETRCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREIIDPPPLAAPDQTR*
Ga0074064_118168221	3300006603	Soil	RRRAMTTPHRLSSQNENRCARPGCPNPVSRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR*
Ga0075529_10098202	3300006619	Arctic Peat Soil	VSAARVSSPNEAPGAGGCARPGCPQPVVRNAVGRPRLYCSPACRTEAYRQAHPASREPLIVEVDHGSTSSKGRPAGQVWLVRLRRGPHQAVLAIGLGKPSADYLASQIRDVIDPPPLATPARIR*
Ga0075521_101425921	3300006642	Arctic Peat Soil	MTAGPVSLPKETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR*
Ga0075520_11119641	3300006795	Arctic Peat Soil	MTAGPVSLPNETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLVVELDHGSSSSPGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR*
Ga0075518_10818591	3300006972	Arctic Peat Soil	PGAGGCARPGCPQPVVRNAVGRPRLYCSPACRTEAYRQAHPASREPLIVEVDHGSTSSKGRPAGQVWLVRLRRGPHQAVLAIGLGKPSADYLASQIRDVIDPPPLATPARIR*
Ga0111539_111952032	3300009094	Populus Rhizosphere	MTAPDRFSSRNENRRENHCARPGCTNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIRDVIDPPPLATPDPTR*
Ga0111538_119595061	3300009156	Populus Rhizosphere	MTAPDRFSSRNENRRENHCARPGCTNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRTPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIRDVIDPPPLATPDPTR*
Ga0123338_101389101	3300009686	Glacier Valley	VTAQHSDPDLPAVVSSPRETPADHACARPGCNNPVVRNPRGRPRLYCTPACRTQTYRDTHPDARLPVHVEVDHGSTSSRGRPAGQVWLIRLHRGHQQVIIATGLGRPSADHLAAQIDHILNPPPLASPTTIR*
Ga0126305_106742771	3300010036	Serpentine Soil	MTAPDRLSARNENRCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIHRGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR*
Ga0126306_107557602	3300010166	Serpentine Soil	MTAPDRLSARNENRCARPGCGNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGCPSAEHLARQIREVIDPPPLAA
Ga0151489_14203852	3300011106	Soil	MTTPHRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILTARLGRASSEHLARQIREVI
Ga0151490_13727311	3300011107	Soil	PRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR*
Ga0136625_10056893	3300012091	Polar Desert Sand	MIDDDGITSRHETPCARPGCMNPVPRNPRGRPRIYCTPACRSAALRYHHPDHRAPLQVEVDHGSTSSRGRPAGQVWLVRLRRGSHHVTVAIGLGRPSAEHLARQIRDVINPPPLATPTQTR*
Ga0136612_104501081	3300012680	Polar Desert Sand	VRNPRGRPRLYCTPACRNQSYRDTHPDARLPVLVEVDHGSTSSRSRPAGQVWLIRLRRGHQQVIIATGLGRPSADHLATQIDNIINPPPLASPAPSR*
Ga0136613_101319953	3300012681	Polar Desert Sand	MNPVPRNPRGRPRIYCTPACRSAALRYHHPDHRAPLQVEVDHGSPSSRGRPAGQVWLVRLRRGSHHVTVAIGLGRPSAEHLARQIRDVINPPPLATPTQTR*
Ga0137419_113380012	3300012925	Vadose Zone Soil	VHRNPRGRPRLYCSPTCRDAAHRHQHPDTRAPITIELDHHDVGTARPTGHVWLIRIRRGTRNAVIADELGRTSAELLATQLREVINPRGD*
Ga0164303_101907892	3300012957	Soil	MTAPDRLSSRNENRCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDPRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREI
Ga0164299_111958961	3300012958	Soil	RCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREIIDPPPLAAPDQTR*
Ga0164309_113295692	3300012984	Soil	SSRNENRCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREIIDPPPLAAPDQTR*
Ga0170683_100068274	3300013027	Rock	VTAQHSDSPRPAVISSPRETPAGRTCARPGCPNPVVRNPRGRPRLYCNPACRTQTYRDTHPDARERLHVEVDHGSTSSRSRPAGQVWLIRLRRGHQQVIIATGLGRPSADHLAAQIDNIINPPPLASPAPTR*
Ga0182019_112580362	3300014498	Fen	RNPRGRPRLYCSPACRDAAHRRQHPDTRAPITIELDHHHAGTGRPTGHVWLVRLRRGTRHTVIADDLGRTSAELLAAQLREVINPRGD*
Ga0167653_10048272	3300015162	Glacier Forefield Soil	MTHDTDISSRHENRCARPGCLNPVPRNPRGRPRLYCTPACRTAAHRHPDTHELLHVEVDHGSTSSRGRPTGQVWLVRLRRGPRHVVIAVGLGRPSAEHLAHQIREVVNPPPLATPPQIR*
Ga0132258_104075133	3300015371	Arabidopsis Rhizosphere	MTTPDRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPTPLAAPTQTR*
Ga0132256_1006311922	3300015372	Arabidopsis Rhizosphere	MTTPHRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILATGLGRPSAEHLARQIREVIDPTPLAAPTQTR*
Ga0132257_1008677062	3300015373	Arabidopsis Rhizosphere	VPRKPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILATGLGRPSAEHLARQIREVIDPPPLAAPAQTR*
Ga0187786_104594342	3300017944	Tropical Peatland	PQPVVRNSIGRPRLYCSPACRTQAHRQAHPAPRQPLIVEVGHGSTSSRGRPAGPVWLVRLRRGSQQVIVATGLGRPSADYLATQIRDIINPPHLAAPAAIR
Ga0187773_100393902	3300018064	Tropical Peatland	SFPNETPGAGRCARPGCPQPVVRNSIGRPRLYCSPACRTQAHRQAHPAPRQPLIVEVGHGSTSSRGRPAGQVWLVRLRRGSQQVIVATGLGRPSADYLATQIRDIINPPHLAAPAAIR
Ga0190265_103715332	3300018422	Soil	MTAPDRLSSRNENHCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSGRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQT
Ga0190275_104366892	3300018432	Soil	MTAPDRLSSRNENHCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPHQT
Ga0190268_109150442	3300018466	Soil	MTAPDRLSAQNENHCARPGCANPVPRNPRGRPRLYCAPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPTGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPHQT
Ga0190268_120188801	3300018466	Soil	MTSDDPMNGSCARPGCPNPVPRNPRGRPRLYCTPSCRDLAHRYLNPDQRAPLTVEVDHDTTAGGRPTGHVWLVRLRRGTHHTVIAAELGRPSADQLARQIRDVINPPPLAGPQQTR
Ga0190270_103821842	3300018469	Soil	MTAPDRLSSRNENHCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSGRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPHQT
Ga0190264_119186472	3300019377	Soil	MTAPDRLSSRNENHCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREVIDPPP
Ga0212090_100642723	3300022561	Glacier Valley	VTAQHDDAGRPAVVSSPAETPASGPCARPGCPNPVVRNPRGRPRLYCNPACRTQSYRDTHPDAREPVHVEIDHGSTSSRGRPAGQVWLIRLRRGHQQVIIATGLGRPSADHLATQINNLINPPPLASPRPVR
Ga0212090_100791312	3300022561	Glacier Valley	VTAQHSDPDLPAVVSSPRETPADHACARPGCNNPVVRNPRGRPRLYCTPACRTQTYRDTHPDARLPVHVEVDHGSTSSRGRPAGQVWLIRLHRGHQQVIIATGLGRPSADHLAAQIDHILNPPPLASPTTIR
Ga0209512_10317333	3300025153	Glacier Valley	VTAQHDDAGRPAVVSSPAETPTSGPCARPGCPNPVVRNPRGRPRLYCNPACRTQSYRDTHPDAREPVHVEIDHGSTSSRGRPAGQVWLIRLRRGHQQVIIATGLGRPSADHLATQINNLINPPPLASPRPVR
Ga0208850_10456362	3300025457	Arctic Peat Soil	VSAARVSSPNETPGAGGCARPGCPQPVVRNAVGRPRLYCSPACRTEAYRQAHPASREPLIVEVDHGSTSSKGRPAGQVWLVRLRRGPHQAVLAIGLGKPSADYLASQIRDVIDPPPLATPARIR
Ga0208479_10514991	3300025474	Arctic Peat Soil	MTTPTPAGCARPGCPNPVHRNPRGRPRLYCSPACRDAAHRRQHPDARAPITIELDHHHAGTGRPAGHVWIVRIRRGTRNTVIADDLGRTSAELLATQLREVINPRGD
Ga0208079_10840311	3300025481	Arctic Peat Soil	MTAGPVSLPNETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLVVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAVLAIGLGKPSADYLASQIRDVIDPHPWQPQPGSDRISVTGQ
Ga0208587_10235052	3300025484	Arctic Peat Soil	VSAARVSSPNETPGAGGCARPGCPQPVVRNAVGRPRLYCSPACRTEAYRQAHPASREPLIVEVDHGSTSSKGRPAGQVWLVRLRRGPHQAVLAIGLGKPSADYLASQIRDVIDPPPLA
Ga0208355_10890472	3300025581	Arctic Peat Soil	MTAGPVSLPNETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLVVEVDHGSTSSRGRPAGHVWLVVRLRRGPQQAIVAVGLGKPSADYLVAQIRDVIDPH
Ga0209747_11895461	3300025750	Arctic Peat Soil	VTAAADIASRHENHCARPGCTNPVPRNPRGRPRLYCSPACRTAAHRYDHPDTRAPLSVEVDHGSSSSRGRPARHVWLVRLRRGSHEVIVAVGLGRPSAEHLARQ
Ga0209176_100536031	3300025854	Arctic Peat Soil	VSAARVSSPNETPGAGGCARPGCPQPVVRNAVGRPRLYCSPACRTEAYRQAHPASREPLIVEVDHGSTSSKGRPAGQVWLVRLRRGPHQAVLAIGLGKPLPTTLPARFATSSTPH
Ga0209584_100099863	3300025878	Arctic Peat Soil	VSATRVSSPNETPGAGGCARPGCPQPVVRNAVGRPRLYCSPACRTEAYRQAHPASREPLIVEVDHGSTSSKGRPAGQVWLVRLRRGPHQAVLAIGLGKPSADYLASQIRDVIDPPPLATPARIR
Ga0207643_104777832	3300025908	Miscanthus Rhizosphere	RNENRCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREIIDPPPLAAPDQTR
Ga0207665_101599552	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTAPDRLSSRNETRCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREIIDPPPLAAPDQT
Ga0208761_10208952	3300026995	Soil	MTTPHRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQT
Ga0302262_101169772	3300028743	Fen	MTAGPVSLPKETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR
Ga0302258_11720432	3300028770	Fen	MTAGPVSLPKETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPHL
Ga0307504_103397101	3300028792	Soil	MTPPDSITSRNETGCARPGCANPVAHNPRGRPRLYCAPACRAAAHRHHHPDARAALHVEVDHGSTSSRGRPAGRVWLVRLRRGNRQAVIAVGLDRPSA
Ga0302259_11235852	3300028861	Fen	MTAPTPAGCARPGCPNPVPRNPRGRPRLYCSPACRDAAHRRQHPDTRAPITIELDHHHAGTGRPTGHVWLVRLRRGTRHTVIADQLGRTSAELLATQLREVINPRGD
Ga0302259_11627161	3300028861	Fen	PGHPAVHRDRQIRPAVMTAGPVSLSNETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR
Ga0302291_100844121	3300028865	Fen	MTAGPVSLPKETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLA
Ga0311347_100520443	3300029923	Fen	MTAGPVSLSNETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR
Ga0311334_116874531	3300029987	Fen	MTAPTPAGCARPGCPNPVHRNPRGRPRLYCSPACRDAAHRHQHPDTRAPITIELDHHHAGTGRPTGHVWLVRIRRGTRNTVIADELGRTSAELLATQLREVINPRAD
Ga0302299_103099981	3300030010	Fen	MTAPTPAGCARPGCPNPVPRNPRGRPRLYCSPACRDAAHRRQHPDTRAPITIELDHHHAGTGRPTGHVWLVRIRRGTRHTVIADDLGRTSAELLATQLREVINPRGD
Ga0311333_104479911	3300030114	Fen	MTAPTPAGCARPGCPNPVPRNPRGRPRLYCSPACRDAAHRRQHPDTRAPITIELDHHHAGTGRPTGHVWLVRLRRGTRHTVIADQLGRTSAELLAAQLREVINPRGD
Ga0311335_112364451	3300030838	Fen	PRPSPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRRGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR
Ga0311366_104837102	3300030943	Fen	MTAGPVSLPKETPGTGRCARPGCPRPVVRNPVGRPRLYCSPPCRAEAHRQAHPASREPLIVEVDHGSTSSRGRPAGHVWLVRLRGGPQQAIVAVGLGKPSADYLAAQIRDVIDPPPLATPARIR
Ga0272435_10103561	3300031447	Rock	VTGSRGHDGVSSPREASSSRSCARPGCPHPVIRNPTGRPRLYCSPACRTETYRLAHPAAHEPLLVEVDHGSTSSRGRPTGHIWLVRLRRGQQQAVIAVGLGRPSADHLATQIRDVITPPPLATPAKIR
Ga0272435_10143825	3300031447	Rock	MTCTDRQAVSSPRKVAAPAQFCARPGCPQPVVRNPRGRPRLYCTPACRTEAHRQRPPDAHQPLLVEVDHGSTSSRGRPAGHVWLVRLRRGHHQAIIAVGLGRPSADDLARQLRDVIDPPPLATPAKIR
Ga0272435_10227441	3300031447	Rock	MTAPQANITPAVVSSPRETPANRPCARPGCPNPVVRNPRGRPRLYCNPACRTQTYRDTHPDSRERLHVEVDHGSTSSRGRPAGQIWLIRLRRGGQQVVIATGLGRPSADHLASQIDNIINPPPLASPAPIR
Ga0272438_10988791	3300031448	Rock	MTAPQANITPTVVSSPRETSASEPCARPGCPNPVVRNPRGRPRLYCNPACRTQTYRDTHPDSRERLHVEVDHGSTSSRGRPAGQIWLIRLRRGHQQVVIATGLGRPSADHLASQIDNIINPPPLASPPPIR
Ga0272429_10475014	3300031449	Rock	MTGDEVVSFRNETPDPARCARTGCDIPIVRNPVGRPRLYCSTGCRTEAYRAANPDQSAPLLVEVDHGSTSSRGRPAGQVWLVRLRRGNHQTIIAVGLGRPSAETLAAQLRDVINPPPLATPARIR
Ga0272429_11334911	3300031449	Rock	DGVSSPRETSSGRSCARPGCPHPVIRNPVGRPRLYCSPACRTKTYRLTHPAAHEPLLVEVDHGSTSSRGRPTGHVWLVRLRRGQQQTVIAIGLGRPSADHLATQIRDVITPPPLATPPRI
Ga0272429_12288012	3300031449	Rock	VTVASEPAVTSPAQTPPEQHRCARPGCPQPVVRNPRGRPRLYCSPACRTQTYRQNQPDARAPLLVEVDHGSTSSRGRPAGHVWLVRLRRGSHQSIVAAGLGRPSAEHLAHQLRDVINPPPLASPPRIR
Ga0272429_12882821	3300031449	Rock	DGVSSPRETSSGRSCARPGCPHPVIRNPVGRPRLYCSPACRTETYRLTHPAAHEPLLVEVDHGSTSSRGRPTGHVWLVRLRRGQQQAVIAIGLGRPSADHLATQIRDVITPPPLATPAKI
Ga0272426_11629341	3300031451	Rock	APATPRRQHARRGGAVNGGSNADRVTSPGETATGSRCARPGCPQPVTRNPVGRPRLYCTPACRTETYRQTHPAAREPVVVEVDHGSTSSRGRPSGHVWLVRLRRGQQQTVIAVGLGRPSAEHLANQIRNVITPPPLATPPRIR
Ga0272422_10323362	3300031452	Rock	VTGSRGQHDGVSSPRETSSGRSCARPGCPHPVIRNPVGRPRLYCSPACRTETYRLTHPAAHEPLIVEVDHGSTSSRGRPTGHVWLVRLRRGQQQAVIAVGLGRPSADHLATQIRDVITPPPLATPPRIR
Ga0272422_11153381	3300031452	Rock	VTVASEPAVTSPAQTPPEQHRCARPGCPQPVVRNPRGRPRLYCSPACRTETYRQNQPDARAPLLVEVDHGSTSSRGRPAGHVWLVRLRRGSHQSIVAAGLGRPSAEHLA
Ga0272425_10220256	3300031453	Rock	VTGSRGHDGVSSPREASSSRSCARPGCPHPVIRNPVGRPRLYCSPACRTETYRLAHPAAHEPLLVEVDHGSTSSRGRPTGHIWLVRLRRGQQQAVIAVGLGRPSADHLATQIRDVITPPPLATPAKIR
Ga0272425_10573251	3300031453	Rock	AAPAQSCARPGCPQPVVRNPRGRPRLYCTPACRAEAHRQRAPDTHAPLLVEVDHGSTSSRSRPAGHVWLVRLRRGHHQTIVAIGLGRPSAEHLARQLRDVIDPPPLAIPADIG
Ga0272425_10790772	3300031453	Rock	VTGAPEQAVSSPTKVAAPAQSCARPGCPQPVVRNPRGRPRLYCTPACRAEAHRQRAPDTHAPLLVEVDHGSTSSRSRPAGHVWLVRLRRGHHQTIVAIGLGRPSAEHLAHQLRDVIDPPPLAIPADIG
Ga0272430_10078653	3300031460	Rock	VTGAPEQAVSSPTKVAAPAQSCARPGCPQPVVRNPRGRPRLYCTPACRAEAHRQRAPDTHAPLLVEVDHGSTSSRSRPAGHVWLVRLRRGHHQTIVAIGLGRPSAEHLARQLRDVIDPPPLAIPADIG
Ga0272430_10423121	3300031460	Rock	MTAPQANITPTVVSSPPETSASEPCARPGCPNPVVRNPRGRPRLYCNPACRTQTYRDNHPDSRERLHVEVDHGSTSSRGRPAGQIWLIRLRRGGQQVVIATGLGRPSADHLASQIDSIINPPPLASPAPIR
Ga0272430_10991812	3300031460	Rock	VTAASEPAVTSPAQTPPEQHRCARPGCPQPVVRNPRGRPRLYCSPACRTETYRQNQPDARAPLLVEVDHGSTSSRGRPAGHVWLVRLRRGSHQSIVAAGLGRPSAEHLARQLRDVINPPPLASPPRIR
Ga0272432_11917542	3300031470	Rock	MTAPQANTVPAVVSSPRETPASEPCARPGCPNPVVRNPRGRPRLYCNPACRTQTYRNTHPDSRERLHVEVDHGSTSSRGRPAGQIWLIRLRRGHQQVVIATGLGRPSADHLASQIDNIINPPPL
Ga0272439_11421211	3300031471	Rock	MTAPQANITPAVVSSPRETPANRPCARPGCPNPVVRNPRGRPRLYCNPACRTQTYRDTHPDSRERLHVEVDHGSTSSRGRPAGQIWLIRLRRGGQQVVIATGLGRPSADHLA
Ga0272437_12775831	3300031472	Rock	MNGPAGRAAPITSPQQTGSPARCARPGCPQPVVRNPRGRPRLYCSPACRTEAHRQRAPGASDPLTVEVDHGSTSSRGRPAGHVWLVRLRRGPTQTIVAIGLGRPSAEHLASQIRDVINPPPVATPARIR
Ga0272437_14212122	3300031472	Rock	ASEPAVTSPAQTPPEQHRCARPGCPQPVVRNPRGRPRLYCSPACRTETYRQNQPDARAPLLVEVDHGSTSSRGRPAGHVWLVRLRRGSHQSIVAAGLGRPSAEHLARQLRDVINPPPLASPPRIR
Ga0272428_10212704	3300031520	Rock	MNGTTGRAKPITSPNETGSPARCARPGCPQPVVRNPRGRPRLYCSPACRTSTYRQAQPAARGPLTVEVDHGSTSSRGRPAGHVWLVRLRRGPTQTIVAIGLGRPSAEHLASQIRNVINPPPVATPATIR
Ga0272428_10547951	3300031520	Rock	VTGSRGQHDGVSSPRETSSGRSCARPGCPHPVIRNPVGRPRLYCSPACRTKTYRLSHPAAHEPLVVEVDHGSTSSRGRPTGHVWLVRLRRGQHQTVIAIGLGRPSADHLATQIRDVITPPPLATPAKIR
Ga0272428_10605183	3300031520	Rock	VTGSRGHDGVSSPRETSSGRSCARPGCPHPVIRNPVGRPRLYCSPACRTETYRLTHPAAHEPLLVEVDHGSTSSRGRPTGHVWLVRLRRGQQQAVIAVGLGRPSADHLATQIRDVITPPPLAT
Ga0272428_13704032	3300031520	Rock	VSTGTVSSPEVTLAEGRCARTGCLQPVVRNPRGRPRRYCSPACRTEAYRQAQPASREPIVVEVDHGSTSSRGRPAGQVWLVRIRRGPLATIVAVGLGRPSADTLATQIRG
Ga0307408_1013165011	3300031548	Rhizosphere	AHDDRRERAMTAPDRLSARNENRCARPGCGNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDRGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR
Ga0307410_118239351	3300031852	Rhizosphere	AMTAPDRLSARNENRCARPGCANPVPRNPRGRPRLYCTPACREAAHRYRHPDRRTPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR
Ga0308175_1012357052	3300031938	Soil	MTAPDRLSSRNENHCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPDQT
Ga0308174_111570292	3300031939	Soil	MTAPDRLSSRNENHCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRAPLTVEIDHGSTSSRGRPAGHVWLVRLRRGNRQAILAAGLGRPSAEHLARQIREVIDP
Ga0307416_1037641091	3300032002	Rhizosphere	ERVEPGRRPTTSTTRRQPGENHCARPGCGNPVPRNPRGRPRLYCTPACREAAHRYRHPDRRTPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDPPPLAAPAQTR
Ga0335085_115796821	3300032770	Soil	MTTRSVSFPNETPGAGRCARPGCPQPVVRNSIGRPRLYCSPACRTQAHRQAHPPPRQPLIVEVGHGSTSSRGRPAGQVWLVRLRRGSQQVIVATGLGRPSADYLATQIRDIINPPHLAAPAAIR
Ga0272423_10114462	3300033168	Rock	MTAAGVSSPNQTPPAARCARDGCLEPIVRNTVGRPRLYCTPACRTEAYRQTNPDRHAPLVVEVDHGSTSSRGRPAGQVWLVRVRRGSQHAIVAVGLGKPSADTLAAQLRDVITPPPLATPAQIR
Ga0272423_12107282	3300033168	Rock	QRRQPAVSTGTVSSPEVTLAEGRCARTGCLQPVVRNPRGRPRRYCSPACRTEAYRQAQPASREPIVVEVDHGSTSSRGRPAGQVWLVRIRRGPLATIVAVGLGRPSADTLATQIRGVIDPPPLATPARIR
Ga0272423_13232531	3300033168	Rock	MTAPQANITPTVVSSPRETSASEPCARPGCPNPVVRNPRGRPRLYCNPACRTQTYRDTHPDSRERLHVEVDHGSTSSRGRPAGQIWLIRLRRGHQQVVIATGLGRPSADHLASQID
Ga0272431_100304905	3300033181	Rock	VSTGTVSSPEVTLAEGRCARTGCLQPVVRNPRGRPRRYCSPACRTEAYRQAQPASREPIVVEVDHGSTSSRGRPAGQVWLVRIRRGPLATIVAVGLGRPSADTLATQIRGVIDPPPLATPARIR
Ga0272431_101647252	3300033181	Rock	VTVASEPAVTSPAQTPPEQHRCARPGCPQPVVRNPRGRPRLYCSPACRTQTYRQNQPDARAPLLVEVDHGSTSSRGRPAGHVWLVRLRRGSHQSIVAAGLGRPSAEHLARQLRDVINPPPLASPPRIR
Ga0272431_101782822	3300033181	Rock	MNGPAGRAAPITSPHESGSPARCARPGCPQPVVRNPRGRPRLYCSPACRTEAHRQRAPGASDPLTVEVDHGSTSSRGRPAGHVWLVRLRRGPTQTIVAIGLGRPSAEHLASQIRDVINPPPVATPARIR
Ga0272431_102527062	3300033181	Rock	MTAPQANITPTVVSSPRETSASEPCARPGCPNPVVRNPRGRPRLYCNPACRTQTYRDTHPDSRERLHVEVDHGSTSSRGRPAGQIWLIRLRRGHQQVVIVTGLGRPSADHLASQIDSIINPPPLASPAPIR
Ga0272431_103611062	3300033181	Rock	MNGPAGRAAPITSPQQTGSPARCARPGCPQPVVRNPRGRPRLYCSPACRTEAHRQRAPGASNPLTVEVDHGSTSSRGRPAGHVWLVRLRRGPTQTIVAIGLGRPSAEHLASQIRDVINPPPVATPARIR
Ga0314865_082985_219_593	3300033806	Peatland	MTVDTVSFPNETPGAGRCARPGCPQPVVRNSIGRPRLYCSPACRTQAHRQAHPAPRQPLIVEVGHGSTSSRGRPAGQVWLVRLRRGSQQVIVATGLGRPSADYLATQIRDIINPPHLAAPAAIR
Ga0314867_010141_345_719	3300033808	Peatland	MTTRSVSFPNETPAAGRCARPGCPQPVVRNPIGRPRLYCSPACRTQAHRQAHPAPRQPLIVEVGHGSTSSRGRPAGQVWLVRLRRGSQQVIVATGLGRPSADYLATQIRDIINPPHLAAPAAIR
Ga0334940_072415_237_635	3300034025	Biocrust	VTEQHDDTSCPAVVSSPRETPAGGACARPGCTNPVVRNPRGRPRLYCTPVCRTQSYRDTHPDARQPVHVEVDHGSTSSRGRPSGQIWLIRLRRGHQHVIIATGLGRPSADHLATQINNLINPPPLASPAPVR
Ga0372943_0066336_1618_1983	3300034268	Soil	MTNDTDISSRHETRCARPGCLNPVPRNPRGRPRLYCNPACRTAAHRHDHSDTRHPLHVEVDHGSTSSRGRPTGQVWLVRLHRGPRQVTIAVGLGRPSAEHLARQIRDLINPPPLATPAQT
Ga0373950_0069068_3_335	3300034818	Rhizosphere Soil	MTTPERLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLARQIREVIDP
Ga0373959_0172691_3_311	3300034820	Rhizosphere Soil	MTTPDRLSSQNENRCARPGCPNPVPRNPRGRPRLYCTPACREAAHRYRHPDQRAPLTVEIDHGSTSSRGRPAGHVWLVRIRRGNRQAILAAGLGRPSAEHLAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079153

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences