Metagenome / Metatranscriptome Family F078934

Basic Information
Family ID	F078934
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	58 residues
Representative Sequence	MTSQPSVLRLQAQPIGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMP
Number of Associated Samples	102
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.04 %
% of genes near scaffold ends (potentially truncated)	77.59 %
% of genes from short scaffolds (< 2000 bps)	88.79 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Most Common Taxonomy
Group	Unclassified (61.207 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge (8.621 % of family members)
Environment Ontology (ENVO)	Unclassified (27.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (39.655 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13419	HAD_2	6.90
PF13356	Arm-DNA-bind_3	6.03
PF06163	DUF977	1.72
PF11855	DUF3375	1.72
PF03466	LysR_substrate	0.86
PF03960	ArsC	0.86
PF00753	Lactamase_B	0.86
PF13242	Hydrolase_like	0.86
PF12161	HsdM_N	0.86
PF07719	TPR_2	0.86
PF00691	OmpA	0.86
PF00990	GGDEF	0.86
PF01053	Cys_Met_Meta_PP	0.86
PF07866	DUF1653	0.86
PF02661	Fic	0.86
PF13011	LZ_Tnp_IS481	0.86
PF04367	DUF502	0.86
PF00034	Cytochrom_C	0.86
PF05016	ParE_toxin	0.86
PF03401	TctC	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.86
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.86
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.86
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.86
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.86
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	0.86
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.86
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.86
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.86
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.86
COG2928	Uncharacterized membrane protein	Function unknown [S]	0.86
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.86
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.86
COG4728	Uncharacterized conserved protein, DUF1653 family	Function unknown [S]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
All Organisms	root	All Organisms	38.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
cellular organisms	root	All Organisms → cellular organisms	38.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.17 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	21.55 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	14.66 %
Ferrovales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales	5.17 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Ferrovaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae	5.17 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.59 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.72 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.86 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Ferrovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum	5.17 %
Nitrospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum	0.86 %
Caenimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caenimonas	0.86 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.86 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	0.86 %
Thiomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Thiomonas	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
unclassified Ferrovum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → unclassified Ferrovum	5.17 %
unclassified Aquabacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium	0.86 %
unclassified Sphingobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales	0.86 %
Thiomonas intermedia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Thiomonas → Thiomonas intermedia	0.86 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.86 %
Caenimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caenimonas	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.21 %
Ferrovum sp. JA12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → unclassified Ferrovum → Ferrovum sp. JA12	5.17 %
Aquabacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp.	0.86 %
Sphingobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	0.86 %
Thiomonas intermedia K12	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Thiomonas → Thiomonas intermedia → Thiomonas intermedia K12	0.86 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.86 %
Caenimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caenimonas	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003411\|JGI25911J50253_10027640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2085	Open in IMG/M
3300003938\|Ga0063230_11904978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	565	Open in IMG/M
3300003986\|Ga0063233_10082232	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300004081\|Ga0063454_101908682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	523	Open in IMG/M
3300004479\|Ga0062595_101581633	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300004481\|Ga0069718_15280871	Not Available	554	Open in IMG/M
3300005338\|Ga0068868_101402928	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300005364\|Ga0070673_101087836	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300005466\|Ga0070685_10106762	All Organisms → cellular organisms → Bacteria → Proteobacteria	1718	Open in IMG/M
3300005513\|Ga0077120_1222126	Not Available	592	Open in IMG/M
3300005618\|Ga0068864_100159261	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300005655\|Ga0073905_10078925	Not Available	1508	Open in IMG/M
3300005656\|Ga0073902_10028352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2758	Open in IMG/M
3300005656\|Ga0073902_10067319	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300005656\|Ga0073902_10341580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	658	Open in IMG/M
3300005659\|Ga0073900_10030018	All Organisms → cellular organisms → Bacteria → Proteobacteria	2497	Open in IMG/M
3300005659\|Ga0073900_10048715	All Organisms → cellular organisms → Bacteria → Proteobacteria	1937	Open in IMG/M
3300005659\|Ga0073900_10557213	Not Available	510	Open in IMG/M
3300005841\|Ga0068863_101638571	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300005986\|Ga0075152_10568832	Not Available	615	Open in IMG/M
3300005991\|Ga0073923_1025961	Not Available	669	Open in IMG/M
3300006177\|Ga0075362_10562997	Not Available	587	Open in IMG/M
3300006195\|Ga0075366_11042542	Not Available	511	Open in IMG/M
3300006641\|Ga0075471_10071674	All Organisms → cellular organisms → Bacteria → Proteobacteria	1894	Open in IMG/M
3300006917\|Ga0075472_10035094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2344	Open in IMG/M
3300006930\|Ga0079303_10421606	Not Available	568	Open in IMG/M
3300007076\|Ga0075435_101643741	Not Available	564	Open in IMG/M
3300007212\|Ga0103958_1180611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → unclassified Ferrovum → Ferrovum sp. JA12	1303	Open in IMG/M
3300007517\|Ga0105045_10275305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → unclassified Ferrovum → Ferrovum sp. JA12	1321	Open in IMG/M
3300007521\|Ga0105044_11081620	Not Available	605	Open in IMG/M
3300007799\|Ga0105049_10928485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → unclassified Ferrovum → Ferrovum sp. JA12	587	Open in IMG/M
3300007799\|Ga0105049_11057370	Not Available	537	Open in IMG/M
3300009009\|Ga0105105_10835140	Not Available	559	Open in IMG/M
3300009032\|Ga0105048_11200075	Not Available	621	Open in IMG/M
3300009075\|Ga0105090_10099848	Not Available	1817	Open in IMG/M
3300009081\|Ga0105098_10112111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1189	Open in IMG/M
3300009082\|Ga0105099_10289772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	957	Open in IMG/M
3300009092\|Ga0105250_10585351	Not Available	515	Open in IMG/M
3300009152\|Ga0114980_10257509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1018	Open in IMG/M
3300009152\|Ga0114980_10757752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caenimonas	542	Open in IMG/M
3300009154\|Ga0114963_10042437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2947	Open in IMG/M
3300009167\|Ga0113563_10133143	Not Available	2358	Open in IMG/M
3300009503\|Ga0123519_10272436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Thiomonas → Thiomonas intermedia → Thiomonas intermedia K12	1079	Open in IMG/M
3300009540\|Ga0073899_10027876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4593	Open in IMG/M
3300009540\|Ga0073899_11030208	Not Available	578	Open in IMG/M
3300010375\|Ga0105239_11582204	Not Available	758	Open in IMG/M
3300011340\|Ga0151652_11234000	Not Available	841	Open in IMG/M
3300011340\|Ga0151652_11776565	Not Available	540	Open in IMG/M
3300012212\|Ga0150985_109666059	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012384\|Ga0134036_1017954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	586	Open in IMG/M
3300012533\|Ga0138256_10020021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7014	Open in IMG/M
3300012533\|Ga0138256_10522647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → unclassified Ferrovum → Ferrovum sp. JA12	955	Open in IMG/M
3300012533\|Ga0138256_10769214	Not Available	745	Open in IMG/M
3300012759\|Ga0157626_1013934	Not Available	648	Open in IMG/M
3300012956\|Ga0154020_11037969	Not Available	629	Open in IMG/M
3300012956\|Ga0154020_11408077	Not Available	515	Open in IMG/M
3300014304\|Ga0075340_1031553	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300014325\|Ga0163163_12922488	Not Available	533	Open in IMG/M
3300018476\|Ga0190274_12968984	Not Available	569	Open in IMG/M
3300019191\|Ga0180035_1098678	Not Available	538	Open in IMG/M
3300019225\|Ga0179949_1137233	Not Available	538	Open in IMG/M
3300019229\|Ga0180116_1257936	Not Available	545	Open in IMG/M
3300019252\|Ga0172286_1581091	Not Available	564	Open in IMG/M
3300019257\|Ga0180115_1072802	Not Available	501	Open in IMG/M
3300019260\|Ga0181506_1044411	Not Available	590	Open in IMG/M
3300021287\|Ga0210338_188598	Not Available	678	Open in IMG/M
3300021346\|Ga0210335_1502703	Not Available	620	Open in IMG/M
3300022161\|Ga0213931_1033939	Not Available	604	Open in IMG/M
3300022185\|Ga0079039_1401851	Not Available	628	Open in IMG/M
3300022185\|Ga0079039_1509819	Not Available	505	Open in IMG/M
3300022366\|Ga0210344_103879	Not Available	973	Open in IMG/M
3300022368\|Ga0210346_122434	Not Available	504	Open in IMG/M
3300022375\|Ga0210313_1029511	Not Available	650	Open in IMG/M
3300022385\|Ga0210376_1086399	Not Available	542	Open in IMG/M
3300022718\|Ga0242675_1135142	Not Available	505	Open in IMG/M
3300022743\|Ga0228699_1111668	Not Available	512	Open in IMG/M
3300024547\|Ga0255292_1091438	Not Available	597	Open in IMG/M
3300025479\|Ga0208588_1097619	Not Available	543	Open in IMG/M
3300025744\|Ga0255245_1051534	Not Available	517	Open in IMG/M
3300025949\|Ga0207667_12013445	Not Available	537	Open in IMG/M
3300025986\|Ga0207658_11987131	Not Available	529	Open in IMG/M
3300027724\|Ga0209582_1031079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1934	Open in IMG/M
3300027726\|Ga0209285_10263720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → unclassified Ferrovum → Ferrovum sp. JA12	542	Open in IMG/M
(restricted) 3300027730\|Ga0247833_1007795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	11146	Open in IMG/M
3300027800\|Ga0209800_10370065	Not Available	592	Open in IMG/M
3300027823\|Ga0209490_10461946	Not Available	711	Open in IMG/M
3300027841\|Ga0209262_10613904	Not Available	527	Open in IMG/M
3300027885\|Ga0209450_10221632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1344	Open in IMG/M
3300027900\|Ga0209253_10027772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4750	Open in IMG/M
3300027956\|Ga0209820_1242863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → unclassified Ferrovum → Ferrovum sp. JA12	505	Open in IMG/M
3300027973\|Ga0209298_10251261	Not Available	704	Open in IMG/M
3300028081\|Ga0255260_1066124	Not Available	539	Open in IMG/M
3300028097\|Ga0255261_1048111	Not Available	680	Open in IMG/M
3300029923\|Ga0311347_10389773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp.	848	Open in IMG/M
3300030002\|Ga0311350_10541690	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300030294\|Ga0311349_11874389	Not Available	552	Open in IMG/M
3300030336\|Ga0247826_11699108	Not Available	515	Open in IMG/M
3300030737\|Ga0302310_10437117	Not Available	710	Open in IMG/M
3300030943\|Ga0311366_11263095	Not Available	636	Open in IMG/M
3300031099\|Ga0308181_1160767	Not Available	532	Open in IMG/M
3300031521\|Ga0311364_11036010	Not Available	818	Open in IMG/M
3300031548\|Ga0307408_101823025	Not Available	582	Open in IMG/M
3300031902\|Ga0302322_101840898	Not Available	742	Open in IMG/M
3300031908\|Ga0310900_11806825	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	520	Open in IMG/M
3300031995\|Ga0307409_101713393	Not Available	657	Open in IMG/M
3300032256\|Ga0315271_11307080	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300032431\|Ga0335395_10551552	Not Available	730	Open in IMG/M
3300032456\|Ga0335394_10690353	Not Available	766	Open in IMG/M
3300033408\|Ga0316605_10748404	Not Available	925	Open in IMG/M
3300033413\|Ga0316603_12158661	Not Available	526	Open in IMG/M
3300033418\|Ga0316625_100002141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5097	Open in IMG/M
3300033418\|Ga0316625_100459449	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300033483\|Ga0316629_10997577	Not Available	658	Open in IMG/M
3300033483\|Ga0316629_11002451	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300034170\|Ga0370487_0315500	Not Available	531	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.55%
Engineered	Engineered	14.66%
Host-Associated	Host-Associated	13.79%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	48.28%
Terrestrial	Environmental → Terrestrial	23.28%
Wastewater	Engineered → Wastewater	14.66%
Plants	Host-Associated → Plants	13.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	39.66%
Soil	Environmental → Terrestrial → Soil	16.38%
Activated Sludge	Engineered → Wastewater → Activated Sludge	12.93%
Marine	Environmental → Aquatic → Marine	7.76%
Peat	Environmental → Terrestrial → Peat	6.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.17%
Roots	Host-Associated → Plants → Roots	2.59%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.86%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.86%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.86%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	12.93%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.62%
Lake	Environmental → Aquatic → Freshwater → Lake	6.90%
Ice	Environmental → Aquatic → Freshwater → Ice	6.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.03%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.03%
River	Environmental → Aquatic → Freshwater → River	4.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.31%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.45%
Pond	Environmental → Aquatic → Freshwater → Pond	1.72%
Creek	Environmental → Aquatic → Freshwater → Creek	1.72%
Coastal	Environmental → Aquatic → Marine → Coastal	1.72%
Loam	Environmental → Terrestrial → Soil → Loam	1.72%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.86%
Sand	Environmental → Terrestrial → Soil → Sand	0.86%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.86%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	12.93%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.62%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	6.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.90%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	6.03%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.03%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.72%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.72%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.86%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.86%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	8.62%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	6.90%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.17%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.17%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.31%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.45%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.59%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	2.59%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	2.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.72%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.72%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.72%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.72%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	1.72%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.86%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.86%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.86%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.86%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.86%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003938	Wetland microbial communities from Twitchell Island in the Sacramento Delta, California, USA - surface sediment Aug2011 Site C1 Bulk Metatranscriptome (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300003986	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (v2)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005513	Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005655	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_supernatant	Engineered	Open in IMG/M
3300005656	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB19-Kit	Engineered	Open in IMG/M
3300005659	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Kit	Engineered	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005986	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 DNA	Engineered	Open in IMG/M
3300005991	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_10-June-14	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007212	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Bottom layer) 7 sequencing projects	Environmental	Open in IMG/M
3300007517	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-02 (megahit assembly)	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300007799	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009032	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009503	Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02	Environmental	Open in IMG/M
3300009540	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Ph	Engineered	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012384	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012533	Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MG	Engineered	Open in IMG/M
3300012759	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES158 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019191	Estuarine microbial communities from the Columbia River estuary - R.880 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019225	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNHW1_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019252	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021287	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.380 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021346	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.374 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022161	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 3-17 MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022366	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.437 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022368	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.454 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022375	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022385	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S771 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022743	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 2-17_Aug_MG	Environmental	Open in IMG/M
3300024484	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024547	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025479	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025744	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027724	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Kit (SPAdes)	Engineered	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027730 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8m	Environmental	Open in IMG/M
3300027800	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)	Environmental	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028081	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028097	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032431	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-02 (spades assembly)	Environmental	Open in IMG/M
3300032456	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25911J50253_100276403	3300003411	Freshwater Lake	MTSQPSGFTPQTQPIGQLLRSSPVLSGECERRVVCSYFVSSGFTSELVLGMP*
Ga0063230_119049781	3300003938	Wetland	MTAQPLVLRPQAQPIGELLRGSPVLSGEGVRLIVRSYFVSSGFTSELVL
Ga0063233_100822322	3300003986	Freshwater Lake	PEPSDPTQDEPMCMTSQPSGFTPQTQPIGQLLRSSPVLSGECERRVVCSYFVSSGFTSELVLGMP*
Ga0063454_1019086821	3300004081	Soil	MCMTRGVQVALITQPMGQLLRGSPVLSGESVRRVVRSYFVSSGFTSELVLGMP*
Ga0062595_1015816331	3300004479	Soil	MTSQPSGTPQTQPIGQLLRSSPVLSGESVRLIVRSYFVSSGFTSELVL
Ga0069718_152808712	3300004481	Sediment	MCMTSQSSGLTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRADSVPTSK
Ga0068868_1014029281	3300005338	Miscanthus Rhizosphere	MTSQRQVALITQPIGQLLRGSPVLSGEGVRRIVRSYFVSSGFTS
Ga0070673_1010878361	3300005364	Switchgrass Rhizosphere	MTSQSQVTLQTQPTGQLLRGSPVLSGESVRLIVRSYFVSSGFTSELVLGVHCSDS
Ga0070685_101067622	3300005466	Switchgrass Rhizosphere	MTSQPQVTPQAQPIGQLLRSSPVLSGESVRLIVRSYFVSSGFTSELVLDVHCSDSEPSSKPGQPQDG*
Ga0077120_12221261	3300005513	Arabidopsis Rhizosphere	MTSQFRILRSLTRPIGQPLRGSRVLSRESVRRVVRSYFVSSGFTSELVLGM
Ga0068864_1001592612	3300005618	Switchgrass Rhizosphere	MTSQRQVALITQPIGQLLRGSPVLSGEGVRRIVRSYFVSSGFTSELVL
Ga0073905_100789252	3300005655	Activated Sludge	MTLQPLPAQTIGDLLQSSPVLSGEGETFVVRSYFVSSGFTSELVLGMPCSDSAPTSNQVGP*
Ga0073902_100283521	3300005656	Activated Sludge	MCMTSQPAVLRLQAQPMGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRAD
Ga0073902_100673191	3300005656	Activated Sludge	MCMTSQSSGSTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRAD
Ga0073902_103415802	3300005656	Activated Sludge	MTSQPWVLRLQAQPIGELLRGSPVLSGEGETFVVRSYFVSSGFTSVLVLGMP*
Ga0073900_100300181	3300005659	Activated Sludge	MCMTSQSSGSTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELV
Ga0073900_100487151	3300005659	Activated Sludge	MTLQPLPAQTIGDLLQSSPVLSGEGETFVVRSYFVSSGFTS
Ga0073900_105572131	3300005659	Activated Sludge	MTLQSLTFRSQTQPIDKLLQGSPVLSGEGVRLIVRSYFVSSGFTSELVLGMP
Ga0068863_1016385712	3300005841	Switchgrass Rhizosphere	MTSQPLTLRSQARPIGQPLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGML
Ga0075152_105688323	3300005986	Wastewater Effluent	MTSLSSALRLQTRPIGQPLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLDMPYSNSAHVETRSAPRDS*
Ga0073923_10259611	3300005991	Sand	MCMTSQSLSFTPQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSG
Ga0075362_105629971	3300006177	Populus Endosphere	MTSQPLVFRPQAQPMDKLLRGSPVLSGESVRLIVRSYFVSSGFTSELVLGMPR
Ga0075366_110425421	3300006195	Populus Endosphere	MTSQPRILRSSARPIGLPLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMP
Ga0075471_100716743	3300006641	Aqueous	MTLQLLPAQTIGDLLQGSPVLSGEGETFVVRSYFVPVDTSVLVLGMP*
Ga0075472_100350946	3300006917	Aqueous	MTLQLLPAQTIGDLLQGSPVLSGEGETFVVRSYLFQWIYGELVLGMP*
Ga0079303_104216061	3300006930	Deep Subsurface	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASKPGRPQG*
Ga0075435_1016437412	3300007076	Populus Rhizosphere	MTSQRQVALITQPIGQLLRGSPVLSGEGVRRVVRSYFVSSGFTSELVLGMP*
Ga0103958_11806112	3300007212	Freshwater Lake	MTSQPLVLRPQAQPIGRLLQGSPVLSGEGETFVVRSYLFPVDTSELVLGMPRADSAPTSKPGRSQAS*
Ga0105045_102753053	3300007517	Freshwater	MCMTSQPSGFTPQAQPIGQLLRGSPVLSGEGVRLIVRSYFVSSGFT
Ga0105044_110816202	3300007521	Freshwater	MTSQPLGFTPQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSGFTS
Ga0105049_109284851	3300007799	Freshwater	MTSQPSVLRLQAQPIGQLLRGSPVLSGEGETFVVRSYFVSSGFT
Ga0105049_110573701	3300007799	Freshwater	MLNDAAQGEPMCMTSQPSGFTLQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSS
Ga0105105_108351401	3300009009	Freshwater Sediment	MCMTSQPAVLRLQAQPMGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRADSAPTSKPGRSQD
Ga0105048_112000752	3300009032	Freshwater	MLNDAAQGEPMCMTSQPSGFTLQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSGFTSVLVLGMP
Ga0105090_100998483	3300009075	Freshwater Sediment	MCMTSQSSGLTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRADSV
Ga0105098_101121112	3300009081	Freshwater Sediment	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASKPGRPQEALV*
Ga0105099_102897722	3300009082	Freshwater Sediment	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTS
Ga0105250_105853511	3300009092	Switchgrass Rhizosphere	MTSQRLRAQPIGLLLRGSPVLSGEGETFVVRSYFVSAGFTSSLMLGMHRSNSAPTSKPGRPLELAIVVSARGPFSRV
Ga0114980_102575092	3300009152	Freshwater Lake	MTSQSLTFRSQTQPIDKLLQGSPVLSGESVRLIVRSYFVSSGFTSGLVLGMPRADSAPTSKPSRSQVLQ
Ga0114980_107577521	3300009152	Freshwater Lake	MCMTSQPSGFTPQTQPIGQLLRSSPVLSGECERRVVCSYFVSSGFTSELVLGMP
Ga0114963_100424371	3300009154	Freshwater Lake	MCMTSQPSGFTPQTQPIGQLLRSSPVLSGECERRVVCSYFVSSGFTSELVLGMP*
Ga0113563_101331434	3300009167	Freshwater Wetlands	MCMTSQSSGLTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTS
Ga0123519_102724363	3300009503	Hot Spring	MTSQVLPPRPIGQPLRGSPGLSGEGVRRIVRSYFVSSGLSSVLGLGMHLSVLL
Ga0073899_100278765	3300009540	Activated Sludge	MCMTSQSSGSTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRADS
Ga0073899_110302081	3300009540	Activated Sludge	MTSQPAVLRLQAQPMGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRADS
Ga0105239_115822041	3300010375	Corn Rhizosphere	MTSQFRILRSLTRPIGQPLRGSRVLSRESVRRVVRSYFVSSGFTSELVLGMPCAG
Ga0151652_112340002	3300011340	Wetland	MTSQPSVFRPQAQPIGELLRGSPVLSGEGVRLIVRSYFVSSGFTSELVLGMPRADSVPTS
Ga0151652_117765652	3300011340	Wetland	MTSQPSVLRPHAQPIGLLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPCFGS
Ga0150985_1096660591	3300012212	Avena Fatua Rhizosphere	MTLQPLALPPQTQPTSKLLQGSPVLSGEGVRLIVRSYFVSSGFTSELVLGMPRADS
Ga0134036_10179541	3300012384	Grasslands Soil	MTSQPSGFTPQAQPMDQLLQGSPVLSGESVRLIVRSYFVSSGFTSELVLGMPRADSVPTSKP
Ga0138256_100200217	3300012533	Active Sludge	MCMTSQPAVLRLQAQPMGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGM
Ga0138256_105226472	3300012533	Active Sludge	MCMTSQSSGSTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMP
Ga0138256_107692141	3300012533	Active Sludge	MTLQSLTFRSQTQPIDKLLQGSPVLSGEGVRLIVRSYFVSSGFTSELVLGMPRADSVPTS
Ga0157626_10139341	3300012759	Freshwater	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASASHHRTVLHA*
Ga0154020_110379692	3300012956	Active Sludge	MCMTSQPAVLRLQAQPMGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRADS
Ga0154020_114080771	3300012956	Active Sludge	MTSLSNVLRLQTRPIGLPLRGSPVLSGEGVRGIVRSYFVSSGFTSELVLGMP
Ga0075340_10315531	3300014304	Natural And Restored Wetlands	MTSQPSVLRLQAQPIGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASKPSRPQAE*
Ga0163163_129224881	3300014325	Switchgrass Rhizosphere	MCMTSQLSGMTRQAQPIGQLLRSSPVLSGEGVRRVVRSYFVSSGFTSELVL
Ga0190274_129689841	3300018476	Soil	MCMTSQPFTFRYQAQPIGQLLRGSPVLSGECVRLIVRSYFVSSGFTSELVLGMPCVD
Ga0180035_10986781	3300019191	Estuarine	MCVTSQPLVLRLQAQPIGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPCFDSEPASKPS
Ga0179949_11372331	3300019225	Anaerobic Digestor Sludge	MCMTSQPLVLRPQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPCVDSEPASASHHRAVLHA
Ga0180116_12579362	3300019229	Groundwater Sediment	MCMTSQSSGLTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMPRADSAPTSKP
Ga0172286_15810911	3300019252	Wetland	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASASHHRAVLHA
Ga0180115_10728021	3300019257	Groundwater Sediment	MTPQPSGVTPQAQPIGQLLRGSPVLSGECVRLIVRSYYVSSGFTSELVLGMPCSNSEPAS
Ga0181506_10444111	3300019260	Peatland	MCMTSQPSVLRLQAQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGLTSELVLGMPRADSAPTSTRPPASQ
Ga0210338_1885981	3300021287	Estuarine	MTSQPSVLRLQAQPIGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMP
Ga0210335_15027031	3300021346	Estuarine	MCMTPQPLSFTPQAQPIGQLLRGSPGLSGESVRRIVRSYFVSSGFTSELVLDMPCSKSEPASKPS
Ga0213931_10339392	3300022161	Freshwater	MTLQPLPAQTIGDLLQSSPVLSGEGETFVVRSYFVSSGLTS
Ga0079039_14018511	3300022185	Freshwater Wetlands	MCMTSQPSVLRPQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLG
Ga0079039_15098191	3300022185	Freshwater Wetlands	MCMTSQSSGLTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLGMP
Ga0210344_1038791	3300022366	Estuarine	MCMTSQPSVLRLQAQPIGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASKP
Ga0210346_1224341	3300022368	Estuarine	MTSQSLVLRPQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSGFTSELVLGMPRADSVPTSKPD
Ga0210313_10295111	3300022375	Estuarine	MCVTSQPLVLRLQAQPIGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGM
Ga0210376_10863991	3300022385	Estuarine	MTSQSLVLRPQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSGFTSELVLGMPRVDSAPTSKP
Ga0242675_11351421	3300022718	Soil	MTSQLRILRSSARPIGQPLRGSRVLSRESVRRVVRSYFVSSGFTSELVLGMP
Ga0228699_11116681	3300022743	Freshwater	MCMTLQLLPAQTIGDLLQGSPVLSGEGVRRIVRSYFVSSGFTSELVLGMPCSDSA
Ga0256332_11354051	3300024484	Freshwater	MTSQPLRARPIGQPLRSSPVLSGESETFVVRSYFV
Ga0255292_10914381	3300024547	Freshwater	MTLQPLRAQTIGDLLQSSPVLSGEGETFVVRSYFVSSGFTSELVLGMPCSDSAPTSKP
Ga0208588_10976192	3300025479	Arctic Peat Soil	MCMTSQPSGVTPQAQPIGQLLRGSPVLSGESVRLIVRSYFVSSGFTSELVLGVHCSDSEPSSKPGQ
Ga0255245_10515341	3300025744	Freshwater	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASASLCRPVLHA
Ga0207667_120134451	3300025949	Corn Rhizosphere	MTSQPLRTRPIGQPLRGSPVLSGEGETFVVRSYFVPDGFTSELVLGMPCSGSVPTSKPSRPQGTASLGQSYPVQE
Ga0207658_119871311	3300025986	Switchgrass Rhizosphere	MCMTSQPLRARPIGLPLRGSPVLSGEGETFVVRSWFVSAGFTSSLMLDVHRSESVPASKPGRPQRC
Ga0209582_10310791	3300027724	Activated Sludge	MTLQPLPAQTIGDLLQSSPVLSGEGETFVVRSYFVSSGFTSELVLGM
Ga0209285_102637201	3300027726	Freshwater Sediment	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVD
(restricted) Ga0247833_100779510	3300027730	Freshwater	MCMTSQPLGFTPQAQPIGQLLRSSPVLSGECERRVVCSYFVSSGFTSELVLGMP
Ga0209800_103700651	3300027800	Freshwater	MCMTSQPSVLRPQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEP
Ga0209490_104619462	3300027823	Freshwater	MCMTSQPSGFTLQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSG
Ga0209262_106139041	3300027841	Freshwater	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASKPGRPQ
Ga0209450_102216322	3300027885	Freshwater Lake Sediment	MCMTSQPSGSTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSELVLG
Ga0209253_100277726	3300027900	Freshwater Lake Sediment	MCMTSQPLGITPQAQPIGQLLRGSPVLSGESVRLIVRSYFVSSGLTSELVLGMPCSNSAPASKPGRPLVSGILGHREQLQ
Ga0209820_12428632	3300027956	Freshwater Sediment	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASKPGRPQV
Ga0209298_102512612	3300027973	Freshwater Lake	MTSQSLTFRSQTQPIDKLLQGSPVLSGESVRLIVRSYFVSSGFTSGLVLGMPRADSAPTSKPSRSQ
Ga0255260_10661241	3300028081	Freshwater	MTSQFLVFRPQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSGLTSELVLGMPRVD
Ga0255261_10481111	3300028097	Freshwater	MYMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASASHLRAVLHV
Ga0311347_103897732	3300029923	Fen	MTSQLGILRSLTRPIGQPLRGSRVLSRESVRRVVRSYFVSSGFTSELVLGMP
Ga0311350_105416901	3300030002	Fen	MTSQYSVLPPQTQPIDQLLQGSPVLSGESVRLIVRSYFVSSGFTSELVLGM
Ga0311349_118743892	3300030294	Fen	MTSQLGILRSLTRPIGQPLRGSRVLSRESVRRVVRSYFVSSGFTSELVLGMPCAG
Ga0247826_116991081	3300030336	Soil	MCMTSQPLRARPIGLPLRGSPVLSGEGETFVVRSWFVSAGFTSSLMLDVHRSESVPASKPGRPQRCDC
Ga0302310_104371171	3300030737	Palsa	MTSQLRILLSLARPIGQPLRGSRVLSRESVRRVVRSYFVSSGFTSELVLGMPCAGSVPTSKPGRPQENH
Ga0311366_112630951	3300030943	Fen	MTSQLRILLSLARPIGQPLRGSPVLSGESVRRVVRSYFVSSGFTSELVLGMHCSDSAPTSKPGQPLKRI
Ga0308181_11607671	3300031099	Soil	MCMTSQSSDVNPRTQPIGQLLRSSPVLSGECVRRVVRSYFVSSGFTSELVLGMPCSDSAPASKP
Ga0311364_110360101	3300031521	Fen	MTSQLRLLLALARPIGQPLRGSRVLSRESVRRVVRSYFVSSGFTSELVLGMPCAGSV
Ga0307408_1018230251	3300031548	Rhizosphere	MCMTSQPLRARPIGLPLRGSPVLSGEGETFVVRSWFVSAGFTSSLMLDVHRSESAPASKPGRPQRDAI
Ga0302322_1018408981	3300031902	Fen	MCMTSQPSGVTPQAQPIGQLLRGSPVLSGESVRLIVRSYFVSSGLTSELVLG
Ga0310900_118068251	3300031908	Soil	MTSQPLRARPIGLPLRGSPVLSGEGETFVVRSWFVSAGFTSSLMLD
Ga0307409_1017133931	3300031995	Rhizosphere	MCMTSQPLRARPIGLPLRGSPVLSGEGETFVVRSWFVSAGFTSSLMLGVHRS
Ga0315271_113070802	3300032256	Sediment	QAQPIGQLLRGSPVLSGESVRLIVRSYFVSSGFTSELVLGMPCSNYAPASKPGRPLVIASLGHREQLQ
Ga0335395_105515522	3300032431	Freshwater	MTSQPLGFTPQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSGFTSELVLGMPRNDSAPTSKPSRSQ
Ga0335394_106903532	3300032456	Freshwater	MCMTSQSLGFTPQTQPIGQLLRGSPVLSGEGVRLIVRSYFVSSGFTSELVLGMPR
Ga0316605_107484041	3300033408	Soil	MTSQSSGLTPQTQPIGQLLRGSPVLSGEGVRSIVRSYFVSSGFTSEL
Ga0316603_121586611	3300033413	Soil	MTSQPSVLRPQTQPIGQLLRGSPVLSGEGETFVVRSYFVSSGFTSVLVLGMPC
Ga0316625_1000021412	3300033418	Soil	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASKPGRPQG
Ga0316625_1004594492	3300033418	Soil	MCMTSQPSGITPQAQPIGQLLQGSPVLSGESVRLIVRSYFVSSGFTSELVLGMPCSNSAPASKPGRPLVSGILGHREQLQ
Ga0316629_109975771	3300033483	Soil	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMP
Ga0316629_110024512	3300033483	Soil	MCMTSQPSVLRLQAQPMGQLLRGSPVLSGEGETFVVRSYFVSSGFTSELVLGMPYVDSEPASKPG
Ga0370487_0315500_2_160	3300034170	Untreated Peat Soil	MTSQLRILLSLARPIGQPLRGSRVLSRESVRRVVRSYFVSSGFTSELVLGMPC

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters