Metagenome Family F078268

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078268
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	68 residues
Representative Sequence	MDETSGVALALRTGVPSYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSRSIFEGALVEG
Number of Associated Samples	66
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.27 %
% of genes near scaffold ends (potentially truncated)	49.14 %
% of genes from short scaffolds (< 2000 bps)	73.28 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (17.241 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.621 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.32% β-sheet: 31.91% Coil/Unstructured: 62.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF04389	Peptidase_M28	1.72
PF01526	DDE_Tnp_Tn3	1.72
PF04519	Bactofilin	1.72
PF12833	HTH_18	1.72
PF00196	GerE	1.72
PF01408	GFO_IDH_MocA	0.86
PF02322	Cyt_bd_oxida_II	0.86
PF00248	Aldo_ket_red	0.86
PF13416	SBP_bac_8	0.86
PF13673	Acetyltransf_10	0.86
PF01261	AP_endonuc_2	0.86
PF02452	PemK_toxin	0.86
PF03575	Peptidase_S51	0.86
PF08241	Methyltransf_11	0.86
PF00218	IGPS	0.86
PF02353	CMAS	0.86
PF01266	DAO	0.86
PF01068	DNA_ligase_A_M	0.86
PF02577	BFN_dom	0.86
PF07040	DUF1326	0.86
PF01425	Amidase	0.86
PF03466	LysR_substrate	0.86
PF03601	Cons_hypoth698	0.86
PF05368	NmrA	0.86
PF13561	adh_short_C2	0.86
PF13847	Methyltransf_31	0.86
PF13489	Methyltransf_23	0.86
PF00583	Acetyltransf_1	0.86
PF14566	PTPlike_phytase	0.86
PF14066	DUF4256	0.86
PF02705	K_trans	0.86
PF00144	Beta-lactamase	0.86
PF03729	DUF308	0.86
PF00561	Abhydrolase_1	0.86
PF07978	NIPSNAP	0.86
PF11154	DUF2934	0.86
PF01419	Jacalin	0.86
PF03022	MRJP	0.86
PF00589	Phage_integrase	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.72
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.72
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.86
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.86
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.86
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.86
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.86
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.86
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.86
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.86
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	0.86
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.86
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.86
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.86
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	0.86
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.86
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.14 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.86 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.59 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.72 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.59 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.86 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.86 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.86 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.59 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.86 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.86 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.72 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.86 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.86 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.86 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.86 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.72 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.86 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.86 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.86 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.86 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.72 %
unclassified Methanosarcina	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina	0.86 %
Granulicella sp. dw_53	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	0.86 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.86 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.86 %
Opitutus terrae	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.72 %
Rhizobium sp. AB2/73	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. AB2/73	0.86 %
Methanosarcina sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp.	0.86 %
Granulicella sp. dw_53	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	0.86 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.86 %
Opitutus terrae	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001170\|JGI12704J13340_1020482	Not Available	523	Open in IMG/M
3300001593\|JGI12635J15846_10042225	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300001593\|JGI12635J15846_10052124	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300001593\|JGI12635J15846_10063714	All Organisms → cellular organisms → Bacteria	2752	Open in IMG/M
3300002906\|JGI25614J43888_10001736	All Organisms → cellular organisms → Bacteria	6606	Open in IMG/M
3300002906\|JGI25614J43888_10004131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4589	Open in IMG/M
3300002906\|JGI25614J43888_10007795	All Organisms → cellular organisms → Bacteria	3466	Open in IMG/M
3300002906\|JGI25614J43888_10095811	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300002906\|JGI25614J43888_10199984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	541	Open in IMG/M
3300002906\|JGI25614J43888_10212331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300002910\|JGI25615J43890_1025942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300002914\|JGI25617J43924_10174126	Not Available	721	Open in IMG/M
3300002917\|JGI25616J43925_10008540	All Organisms → cellular organisms → Bacteria	4464	Open in IMG/M
3300005332\|Ga0066388_106251974	Not Available	601	Open in IMG/M
3300005332\|Ga0066388_106401133	Not Available	594	Open in IMG/M
3300005434\|Ga0070709_10087664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2045	Open in IMG/M
3300005436\|Ga0070713_100045747	All Organisms → cellular organisms → Bacteria	3588	Open in IMG/M
3300005436\|Ga0070713_100161318	Not Available	2002	Open in IMG/M
3300005437\|Ga0070710_11111362	Not Available	581	Open in IMG/M
3300005445\|Ga0070708_100345166	Not Available	1403	Open in IMG/M
3300005445\|Ga0070708_101300965	Not Available	679	Open in IMG/M
3300005518\|Ga0070699_100266144	Not Available	1533	Open in IMG/M
3300005602\|Ga0070762_10171990	Not Available	1310	Open in IMG/M
3300005712\|Ga0070764_10637169	Not Available	652	Open in IMG/M
3300005921\|Ga0070766_11206744	Not Available	523	Open in IMG/M
3300007258\|Ga0099793_10537937	Not Available	582	Open in IMG/M
3300010043\|Ga0126380_10448419	Not Available	974	Open in IMG/M
3300010048\|Ga0126373_10510974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1245	Open in IMG/M
3300010048\|Ga0126373_11374056	Not Available	772	Open in IMG/M
3300010361\|Ga0126378_10956333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300010361\|Ga0126378_11792542	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300010376\|Ga0126381_100249872	All Organisms → cellular organisms → Bacteria	2402	Open in IMG/M
3300010376\|Ga0126381_101156306	Not Available	1118	Open in IMG/M
3300012202\|Ga0137363_11829991	Not Available	500	Open in IMG/M
3300012582\|Ga0137358_10486142	Not Available	832	Open in IMG/M
3300012582\|Ga0137358_10873784	Not Available	591	Open in IMG/M
3300012918\|Ga0137396_10888255	Not Available	654	Open in IMG/M
3300020140\|Ga0179590_1007870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2192	Open in IMG/M
3300020140\|Ga0179590_1023182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	1478	Open in IMG/M
3300020199\|Ga0179592_10502984	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300020581\|Ga0210399_10430890	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300020582\|Ga0210395_10221139	Not Available	1421	Open in IMG/M
3300020582\|Ga0210395_10493331	Not Available	921	Open in IMG/M
3300021046\|Ga0215015_10393741	Not Available	841	Open in IMG/M
3300021168\|Ga0210406_10851082	Not Available	690	Open in IMG/M
3300021168\|Ga0210406_11026631	Not Available	612	Open in IMG/M
3300021170\|Ga0210400_10544891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	957	Open in IMG/M
3300021180\|Ga0210396_10001192	All Organisms → cellular organisms → Bacteria	29153	Open in IMG/M
3300021372\|Ga0213877_10022248	Not Available	1714	Open in IMG/M
3300021372\|Ga0213877_10190121	Not Available	663	Open in IMG/M
3300021403\|Ga0210397_10122160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1787	Open in IMG/M
3300021439\|Ga0213879_10123930	Not Available	737	Open in IMG/M
3300021444\|Ga0213878_10003688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5379	Open in IMG/M
3300021474\|Ga0210390_10180324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1784	Open in IMG/M
3300021474\|Ga0210390_10855552	Not Available	750	Open in IMG/M
3300021474\|Ga0210390_10900542	Not Available	728	Open in IMG/M
3300021474\|Ga0210390_10985489	Not Available	689	Open in IMG/M
3300021560\|Ga0126371_10623673	All Organisms → cellular organisms → Bacteria → Proteobacteria	1227	Open in IMG/M
3300024288\|Ga0179589_10063344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1429	Open in IMG/M
3300024288\|Ga0179589_10395638	Not Available	633	Open in IMG/M
3300024288\|Ga0179589_10486891	Not Available	571	Open in IMG/M
3300024347\|Ga0179591_1010830	All Organisms → cellular organisms → Bacteria	3390	Open in IMG/M
3300026285\|Ga0209438_1030157	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300026304\|Ga0209240_1000319	All Organisms → cellular organisms → Bacteria	20149	Open in IMG/M
3300026304\|Ga0209240_1000798	All Organisms → cellular organisms → Bacteria	12837	Open in IMG/M
3300026304\|Ga0209240_1002397	All Organisms → cellular organisms → Bacteria	7113	Open in IMG/M
3300026304\|Ga0209240_1002510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6964	Open in IMG/M
3300026304\|Ga0209240_1082464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	1182	Open in IMG/M
3300026319\|Ga0209647_1001537	All Organisms → cellular organisms → Bacteria	19399	Open in IMG/M
3300026319\|Ga0209647_1031891	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300026319\|Ga0209647_1068067	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300026319\|Ga0209647_1249717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	594	Open in IMG/M
3300026356\|Ga0257150_1039742	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp.	686	Open in IMG/M
3300026551\|Ga0209648_10312712	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300026557\|Ga0179587_11083004	Not Available	527	Open in IMG/M
3300026674\|Ga0207924_100760	Not Available	577	Open in IMG/M
3300027109\|Ga0208603_1021815	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300027548\|Ga0209523_1027965	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300027567\|Ga0209115_1099985	Not Available	658	Open in IMG/M
3300027609\|Ga0209221_1023689	Not Available	1630	Open in IMG/M
3300027609\|Ga0209221_1137238	Not Available	614	Open in IMG/M
3300027648\|Ga0209420_1009394	Not Available	3575	Open in IMG/M
3300027648\|Ga0209420_1063357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1088	Open in IMG/M
3300027648\|Ga0209420_1069582	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300027648\|Ga0209420_1098870	Not Available	830	Open in IMG/M
3300027692\|Ga0209530_1178686	Not Available	590	Open in IMG/M
3300027884\|Ga0209275_10067201	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300027889\|Ga0209380_10680275	Not Available	592	Open in IMG/M
3300027895\|Ga0209624_10406490	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300028906\|Ga0308309_10445890	Not Available	1114	Open in IMG/M
3300031231\|Ga0170824_102462289	Not Available	537	Open in IMG/M
3300031231\|Ga0170824_125263912	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300031715\|Ga0307476_10177742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1539	Open in IMG/M
3300031715\|Ga0307476_10625978	Not Available	798	Open in IMG/M
3300031715\|Ga0307476_10922684	Not Available	644	Open in IMG/M
3300031715\|Ga0307476_11286779	Not Available	534	Open in IMG/M
3300031718\|Ga0307474_10044563	All Organisms → cellular organisms → Bacteria	3273	Open in IMG/M
3300031718\|Ga0307474_10377809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300031753\|Ga0307477_10163237	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031753\|Ga0307477_10334323	Not Available	1043	Open in IMG/M
3300031753\|Ga0307477_11017942	Not Available	543	Open in IMG/M
3300031754\|Ga0307475_10121889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. AB2/73	2054	Open in IMG/M
3300031754\|Ga0307475_10399108	Not Available	1105	Open in IMG/M
3300031823\|Ga0307478_10092073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2333	Open in IMG/M
3300031823\|Ga0307478_10242330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1463	Open in IMG/M
3300031823\|Ga0307478_10272382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1380	Open in IMG/M
3300031823\|Ga0307478_11427210	Not Available	574	Open in IMG/M
3300031962\|Ga0307479_10207250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1931	Open in IMG/M
3300031962\|Ga0307479_10782604	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300031962\|Ga0307479_11737173	Not Available	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.14%
Fungi	Host-Associated → Fungi	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.14%
Mycelium	Host-Associated → Fungi → Mycelium	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.69%
Loam	Environmental → Terrestrial → Soil → Loam	28.45%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	16.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.17%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001170	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026674	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN356 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12704J13340_10204822	3300001170	Forest Soil	LETGVPIYQVEDEEGRTHLLIYLAIEERHEHRWCLWRPDRAGFDSRSIFEGATVKE*
JGI12635J15846_100422257	3300001593	Forest Soil	ELKTGVPTYQVEDEEGRTHLLLHLTIEEKDANRWCLWRPDHAGFDSRSIFEGALVDE*
JGI12635J15846_100521244	3300001593	Forest Soil	MLGTRHKLVRFWMNKTSGVALGLKTGVPSYQVEDEEGRTHLLIHLAIQEQNEHRWCLWRTDHAGFDSRSTIFEGALVEE*
JGI12635J15846_100637141	3300001593	Forest Soil	FFAVIKFWMDATSGVALDLETGVPIYQVEDEEGRTHLLIYLAIEERHEHRWCLWRPDRAGFDSRSIFEGATVKE*
JGI25614J43888_100017363	3300002906	Grasslands Soil	MDETSGVTLALKTGIPSYQIEDEEGRTHLLIHLTIEEENENRWCLWRPDHAGFDSRRSLRVP*
JGI25614J43888_100041311	3300002906	Grasslands Soil	MDETSGVALALKTGVPTYQVEDEEGRTHLLIHLPIEEENEDRWCLWCPDQVGFDSRLIFEAALVEE*
JGI25614J43888_100077954	3300002906	Grasslands Soil	MDETSGVALALKSGIPSYQVEDEEGRIHLLLYLPIHQNEDRWCLWRPDHAGFDSRSIFEGALIQE*
JGI25614J43888_100958111	3300002906	Grasslands Soil	FWMDATSGVALELKTGVPAYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSRSIFEGALVEE*
JGI25614J43888_101999841	3300002906	Grasslands Soil	FIKFWMDETSGVALALKTGVPSYQVEDEEGRTHLLIHLRIEEDGDNNRWCLWRPDQAGFDSRSIFEGALVARSG*
JGI25614J43888_102123312	3300002906	Grasslands Soil	MKPLALRLLSEASVPSYQVEDEEGRIHLLIHLAIEEENEHRWCLWRPDHAGFDSRS
JGI25615J43890_10259421	3300002910	Grasslands Soil	KFWMDETSGVALALKTGVPSYQVEDEEGRTHLLIHLPIEEDEDRWCLWRPDHAGFDSRSIFEAALVEE*
JGI25617J43924_101741261	3300002914	Grasslands Soil	MDKTSGVALPLESGVPTYQVQGEEGRTHLLIHLPIEEQNEHRWCLWRPDHAGFDSRSIFEGALVEE*
JGI25616J43925_100085404	3300002917	Grasslands Soil	VAFLPNQVEDEEGRAYLLIHLAIEEQNQHRRCLWRSDQAGFDSMSIFDGALIEK*
Ga0066388_1062519741	3300005332	Tropical Forest Soil	EDKPDRLFTVIKPWADEALSISLKLSSDVPCYQVEDEEGRTHLLIRLPIEEQNQHRWCLWRPDHAGFDSRSIFEGALVEE*
Ga0066388_1064011331	3300005332	Tropical Forest Soil	GVALELNTGVPSYHVDDEEGRTHLLIHLPIEADEHRWCLWRPDLAGFDSRSIFEGALVEG
Ga0070709_100876641	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDATSGVALELKTGVPTYQVEDEEGTIHLLLHLLIEEENEHRWCLWRPDHTASDSRSIFESPLIEE*
Ga0070713_1000457472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIFEGAPVEK*
Ga0070713_1001613183	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VITFCIDKVSGVALDLETGVPCYQAEDEEGRIHLLIQLPIGEKNENRWCLWRPDQAEFDSKSIFDGALIEE*
Ga0070710_111113621	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GSPKTTPATKCLAIVKFWMDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIFEGAPVEK*
Ga0070708_1003451662	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDETSGVALALRGSGPTYQVEDEEGRTHLLINFPIEEGHDDRWCLWRPDHAGFDSRSIFEAALVEE*
Ga0070708_1013009651	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LDETSGVALALKTDVPTYQVEEEEGRTHLLIHLPIEEEDEDRWCLWRPDHAAFDSRSIFEGALVDQ*
Ga0070699_1002661444	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LDETSGVALALKTDVPTYQVEEEEGRTHLLIHLPIEEEDEDRWCLWRPDHAAFDSRSIFEGALIEE*
Ga0070762_101719903	3300005602	Soil	LIRPAASAVNSDSGGQADRFFIVIKFWMAATSGAALALETGVRSYQVEDEEGRMHLLIHLAIEEDRWCLWWPDHEWFDSRSIFESALVEK*
Ga0070764_106371691	3300005712	Soil	MTLRVALALKGGVPTYQVEDQEGRTLLLIHLPIEEADENRWCLWRPDHAGVDSRSIFEGALTD*
Ga0070766_112067442	3300005921	Soil	IKFWMDATSGVALDLKTGVPIYQVEDEEGRTHLLIHLSIEEQNEHRWCLWRPDHAGFDSKSIFEGALIEE*
Ga0070717_100379271	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DLEMGVPCYQVEDEEGRIHLLLQLPIGEENKNRWCLWRPDQVDFDFRSIFEGALIEE*
Ga0099793_105379371	3300007258	Vadose Zone Soil	MDETSGVALALRGGVPTYQVEGEKGRTHLRIHLTIEEQNEHRWCLWRPDHAGFDSRSIFDNALIEE*
Ga0126380_104484191	3300010043	Tropical Forest Soil	ERFFRVIKFWLDQTSGIAHALRTGVPSYQVEDVEGRIHLLLDLPIEEENEDGWHLRRPDQTGFNSRPIFEGALIEE*
Ga0126373_105109742	3300010048	Tropical Forest Soil	MDETSGIALALKTGVSSYQVEDEEGRIHLLLHFPIEDKNQDRWFLWRPDQDGFNSRSIFDGALVEE*
Ga0126373_113740562	3300010048	Tropical Forest Soil	LHDKPDRFFTVIKFRMDESSGVALELKTGVPTYQVEGEEGRIHLLIHLPIEEENEDRWCLWRPDQVSFDSRSIFDDALVEE*
Ga0126378_109563331	3300010361	Tropical Forest Soil	PDRFFTVIKFWIDKTSGMALELNTGVPSYHVDDEEGRTHLLIHLPIEANEHRWCLWRPDLAGFDSRSIFEGALVDE*
Ga0126378_117925421	3300010361	Tropical Forest Soil	ITFLIDAVSGVALDLKTGVPCYQVEDEEGRIHLLVHLPIEEKDEGRWCLWRPDQAAFDSRSIFYGALIED*
Ga0126381_1002498722	3300010376	Tropical Forest Soil	LELNTGVPSYHVNDEEGRTHLLIHLPIEADEHRWCLWRPDLAGFDSRSIFEGALVEG*
Ga0126381_1011563062	3300010376	Tropical Forest Soil	MKPRALALALKTGVPTYQVEDKEGRIHLLIHLPIEEAGDNNRWSLWRPDHAGFDSRSIFAGALVEE*
Ga0137363_118299911	3300012202	Vadose Zone Soil	SGLLGIGIGIPCYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSKSIFEAALVEK*
Ga0137358_104861422	3300012582	Vadose Zone Soil	SDDRPDRFFTVIQFWMDETSGVALALRGGVPTYQVEGEKGRTHLRIHLTIEEQNEHRWCLWRPDHAGFDSRSIFDNALIEE*
Ga0137358_108737841	3300012582	Vadose Zone Soil	MDETSGMALALKTGVPSYQVEDEEGRTHLLTQLAIEGDVEHRWCLWRPDHAGFDSRSIFESALISE*
Ga0153928_10759852	3300012677	Attine Ant Fungus Gardens	LKTGVPCYQVEDEEGRIHLLLQLPIGEDNENRWVLWRPDQAGFDSRSIFHGALVEE*
Ga0137396_108882551	3300012918	Vadose Zone Soil	RFFTVIKFWMDETSGVALALRGGVPSYQVEDEEGRTHLLIHLPVEEEDEDRWCLWRPDHAGFDSRSIFEGALVED*
Ga0179590_10078706	3300020140	Vadose Zone Soil	AVIKFWMDETLGASLALGTGVPSYQGENEEGRTHLLIHLAIEEQNERRWYLWRPDHAGFDSRSIFKGALVEE
Ga0179590_10231821	3300020140	Vadose Zone Soil	MDEPSGVALALNAGVPTYQVEDEEGRTHLLIHLPIEEEHEHRWCLWRPDQAGFDSRSIFEGALVEE
Ga0179592_105029842	3300020199	Vadose Zone Soil	KFWMDETSGVALALKNGIPTYQVEDEEGRTHLVIHLPIEDDGDRWCLWRPDHAGFDSRSIFEGALVAE
Ga0210399_104308902	3300020581	Soil	MDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIYEGAPVEK
Ga0210395_102211392	3300020582	Soil	MDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIFEGAPVEK
Ga0210395_104933311	3300020582	Soil	VITFCIDKVSGVALDLETGVPCYQAEDEEGRIHLLIQLPIGEKNENRWCLWRPDQAELDSKSIFDGALIEE
Ga0215015_103937412	3300021046	Soil	IKFWMDATSGVALDLKTGVPAYHVEDEEGRTHLLIHLAIEEQIEHRWCLWRPDQAGFDSRSIFEGALVEE
Ga0210406_102731031	3300021168	Soil	LRDGVPTYQVEDEEGRIHLLIHLAIEEQIEHRWCLWRPDQAGFDSRSIFEGALIEE
Ga0210406_108510821	3300021168	Soil	TVIKFWMDETSGVALALTTGVPTYQVEDEEGRSHLLIHLTIEEQLGHRWCLWRPDHAGFDFRSIFESALIEE
Ga0210406_110266311	3300021168	Soil	SGVALALKTGVPTYQVEDEEGRSHLLIHLTIEEQLEHRWCLWQPDHAGFDSRSIFESALIEE
Ga0210400_105448912	3300021170	Soil	MDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIYEGAPVE
Ga0210396_1000119216	3300021180	Soil	VITFCIDKVSGVALDLETGVPCYQAEDEEGRIHLLIQLPIGEKNENRWCLWRPDQAEFDSKSIFDGALIEE
Ga0213877_100222481	3300021372	Bulk Soil	MDETSGVALDLKTGVPSYQVEDEEGRVHLLIHLPIEEDGDDNRWCLWRPDHVGFDSRSIFEGTLIEE
Ga0213877_101901211	3300021372	Bulk Soil	FWIDKTSGVALDLKTGVPSYQVDDEEGRTHLLIHLPLEANDHRWCLWRPDLAGFDSRSIFEGALIEG
Ga0213877_102143882	3300021372	Bulk Soil	EGLSIPLESIGGVPSYQVEDEEGRTHLLLHLQIEEYDRRWCLWRPDQAGIDYRSLFNGALVED
Ga0210397_101221601	3300021403	Soil	RVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEENKNRWCLWRPDQVDFDFRSIFEGALIEE
Ga0213879_101239301	3300021439	Bulk Soil	DKTSGVALDLKTGVPTYQVEDEEGRTHLLIRLPIDENGDRWCLWRPDHAGFDSRSIFEGALVEE
Ga0213878_100036881	3300021444	Bulk Soil	FSLMIKPDRFFTIIKFWMDETSGVALALKGGVPTYQVEDEDGRIHLLIHLPIEENEHRWCLWRPDQAGFDSRSVFAGALVEE
Ga0210390_101803241	3300021474	Soil	DRVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEENKNRWCLWRPDQVDFDFRSIFEGALIEE
Ga0210390_108555521	3300021474	Soil	IDKVSGVALDLETGVPCYQAEDEEGRIHLLIQLPIGEKNENRWCLWRPDQAEFDSKSIFDGALIEE
Ga0210390_109005422	3300021474	Soil	MDATSGVALELKTGVPTYAPKACRRREEGRTHLLIHVPIEEEKEDRWCLWRPDHAGFDSRSIFEGALIENRPASRKNVL
Ga0210390_109854891	3300021474	Soil	LETGVRSYQVEDEEGRMHLLIHLAIEEDRWCLWWPDHEWFDSRSIFESALVEK
Ga0126371_106236732	3300021560	Tropical Forest Soil	MDETSGIALALKTGVSSYQVEDEEGRIHLLLHFPIEDKNQDRWFLWRPDQDGFNSRSIFDGALVEE
Ga0179589_100633442	3300024288	Vadose Zone Soil	MDETSGIALALRGGVPSSQVEDEEGRIHLLIHFPIEEENEHRWCVWRPDHAGFDSRSVFD
Ga0179589_103956382	3300024288	Vadose Zone Soil	LLYVIKFWMDETSGVALELKTGIPTYHVEDEEGRTHLLIHLPIEEEDADRWCLWRPDHAGFDSRSISEGALVEE
Ga0179589_104868912	3300024288	Vadose Zone Soil	MDETSGVALALKTGVPTYQIEDEEGRSHLLIHLTIEEQLEHRWCLWRPDHAGFDSRSIFESALIEE
Ga0179591_10108302	3300024347	Vadose Zone Soil	MDETSGIALALKTGVPSYQLEDEEGTTHLLIPLPIEEEHKHRRCLWRPDLAGFDSRAIFEGALVEKTSIQKNALKSD
Ga0209438_10301571	3300026285	Grasslands Soil	MDETSGASLALGTGVPSYQGENEEGRTHLLIHLAIEEQNERRWYLWRPDHAGFDSRSIFKGALVEE
Ga0209240_100031919	3300026304	Grasslands Soil	TVIKFWMDETSGVALALKTGVPSYQVEDEEGRTHLLIHLPIEEDEDRWCLWRPDHAGFDSRSIFEAALVEE
Ga0209240_100079810	3300026304	Grasslands Soil	MDETSGVALALKTGVPTYQVEDEEGRTHLLIHLPIEEENEDRWCLWCPDQVGFDSRLIFEAALVEE
Ga0209240_10023973	3300026304	Grasslands Soil	MDETSGVALALRTGVPSYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSRSIFEGALVEG
Ga0209240_10025108	3300026304	Grasslands Soil	PDRFFTVIKFWMDATSGVALELKTGVPAYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSRSIFEGALVEE
Ga0209240_10824642	3300026304	Grasslands Soil	MKPLALRLLSEASVPSYQVEDEEGRIHLLIHLAIEEENEHRWCLWRPDHAGFDSRSIFEAALIEK
Ga0209647_100153712	3300026319	Grasslands Soil	MDETSGVTLALKTGIPSYQIEDEEGRTHLLIHLTIEEENENRWCLWRPDHAGFDSRRSLRVP
Ga0209647_10318913	3300026319	Grasslands Soil	MDETSGVALELKTGVPTYQVEDEEGRTHLLIHVPIEEENEDRWCLWRPDHAGFDYRSIFEGALVEK
Ga0209647_10680671	3300026319	Grasslands Soil	LYSIPNAAWIFTIIKFWMDETSGVALALRGGVPTYQVEGEEGRTHLLINLPIEEADENRWCLWRPDQAGFDSRSIFEGALAGE
Ga0209647_12497171	3300026319	Grasslands Soil	ALKTGVPSYQVEDEEGRTHLLIHLRIEEDGDNNRWCLWRPDQAGFDSRSIFEGALVARSG
Ga0257150_10397422	3300026356	Soil	DETSGASLALGTGVPSYQGENEEGRTHLLIHLAIEEQNERRWYLWRPDHAGFDSRSIFKGALVEE
Ga0209648_103127122	3300026551	Grasslands Soil	MDETSGVALALKSGIPSYQVEDEEGRIHLLLYLPIHQNEDRWCLWRPDHAGFDSRSIFEGALIQE
Ga0179587_110830041	3300026557	Vadose Zone Soil	FWMDETLGASLALGTGVPSYQGENEEGRTHLLIHLAIEEQNERRWYLWRPDHAGFDSRSIFKGALVEE
Ga0207924_1007601	3300026674	Soil	RVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEKNENRWCLWRPHRVVFDSRSIFDVALIDG
Ga0209214_10008931	3300027071	Forest Soil	LKTGVPTYQVEDEEGRTHLLIHLPIEEEDENRWCLWRPDLVGVDSRSIFDGALVKG
Ga0208603_10218152	3300027109	Forest Soil	RSFTVIKFWMDATSGVALELTTGVPTYQVEDEEGRTHLLIHLPIEEDEDRWCLWRPDHAGFDSRSIFEGALIEE
Ga0209523_10279651	3300027548	Forest Soil	MDATSGVALELKTGVPTYQVEDEEGRIHLLIHLAIEEQNEHRWCLWRPDHAGFDSRSIFEGALIEE
Ga0209115_10999852	3300027567	Forest Soil	MAATSGAALALETGVRSYQVEDEEGRMHLLIHLPIEEEDENRCCLWRPDRAGFDSKSIFEGAL
Ga0209221_10236891	3300027609	Forest Soil	DRFFAVIKFWMDATSGVALDLETGVPIYQVEDEEGRTHLLIYLAIEERHEHRWCLWRPDRAGFDSRSIFEGATVKE
Ga0209221_11372382	3300027609	Forest Soil	MNKTSGVALGLKTGVPSYQVEDEEGRTHLLIHLAIQEQNEHRWCLWRTDHAGFDSRSTIFEGALVEE
Ga0209420_10093942	3300027648	Forest Soil	MLGTRHKLVRFWMNKTSGVALGLKTGVPSYQVEDEEGRTHLLIHLAIQEQNEHRWCLWRTDHAGFDSRSTIFEGALVEE
Ga0209420_10633572	3300027648	Forest Soil	MDATSGVALELKTGVPTYQVEDEEGRTHLLLHLTIEEKDANRWCLWRPDHAGFDSRSIFEGALVDE
Ga0209420_10695822	3300027648	Forest Soil	MDATSGVALDLETGVPIYQVEDEEGRTHLLIYLAIEERHEHRWCLWRPDRAGFDSRSIFEGATVKE
Ga0209420_10988701	3300027648	Forest Soil	DRFFTVIKFWMDAISGVALELKTGVPTYQVEDEEGRTHLLIHLATDEEHEHRWCLWRPDHAGFDSRSIFEGALVEEFSDR
Ga0209530_11786861	3300027692	Forest Soil	MDKTSGVALDLETGVHTYQAEHEEARTHLLIHLPIEEQGEDRWCLWRPDHAGFDSRSIFESALIEE
Ga0209275_100672014	3300027884	Soil	LIRPAASAVNSDSGGQADRFFIVIKFWMAATSGAALALETGVRSYQVEDEEGRMHLLIHLAIEEDRWCLWWPDHEWFDSRSIFESALVEK
Ga0209380_106802751	3300027889	Soil	MDKTSGVALELKTGVPTYQFEDEDGRTHLLIHVPIEEENEDRWCLWRPDHAGFDLSVRSH
Ga0209624_104064901	3300027895	Forest Soil	LLFSDDKPDRFFTDIKFWMDATSGIALALKSGVPSYQVEDEEGRTHLLIHVLIEEKDADRWCLWRPDRAGSDSRSIF
Ga0308309_104458902	3300028906	Soil	MDATSGVALELKTGVPTYQVEDEEGRTHLLIHLLIEEQHEHPWCLWRPDHARFDSRSIFEGALVEK
Ga0170824_1024622891	3300031231	Forest Soil	LALKTGVPTYQVEDEEGRSHLLIHLTIEEQLEHRWCLWRPDHAGFDSRSIFESALIEE
Ga0170824_1252639121	3300031231	Forest Soil	MHESSGVALKLKTGVPSYQVEDEEGRTHLLIHLAIEEEDEDRWCLWRPDHAGFDSRSIFEGAFVDFIKTNPG
Ga0307476_101777421	3300031715	Hardwood Forest Soil	TVIKFWMDATSGVALELKTGVPTYQVEDEEGRIHLLIHITIEEDEDRWCLWRPDHADFDSRSIFDGALVDG
Ga0307476_106259781	3300031715	Hardwood Forest Soil	MDETSGVALALKTSVPSYQVEDEEGRIHLLVRLPIEEDGDRWCLWRPDQAGFDSSSIFEGALIE
Ga0307476_109226841	3300031715	Hardwood Forest Soil	ADQPDRFFAVIKFWLDETSGVALAVKGGVPTYQVEDEEGRIHLLLHLAIEEENEHRWCLWRPNHAGFDSRSVFEVALIEE
Ga0307476_112867791	3300031715	Hardwood Forest Soil	LELNTGVPTYQVEDEEGRIHLLIHLAIEEQNEHRWCLWRPDHAEFDSRSIFEGALVEE
Ga0307474_100445632	3300031718	Hardwood Forest Soil	MDEISGVALALKVGVPTYQVEDEEGRIHLLLHLPIEEENEHRWCLWRPDHAGFDSRSIFEAALIEE
Ga0307474_103778092	3300031718	Hardwood Forest Soil	MDETSGASLGLGIGVPCYQIDDEEGRTHLLIQLTIKEEDADRWCFWRPDHAGFDSKSIFELLWLKNKAAFKKTL
Ga0307477_101632372	3300031753	Hardwood Forest Soil	MDEISGVALALKVGVPTYQVEDEEGRIHLLLHLPIEEENEHRWCLWRPDHAGFDSRSIFEAA
Ga0307477_103343232	3300031753	Hardwood Forest Soil	SDDKPDRFFTVIKFWMDETSGVALALKGGIPTYQVEDEEGRTHLLIHLPIEEEDENRWCLWRPDHAGFDSRSIFEGALVEQ
Ga0307477_110179421	3300031753	Hardwood Forest Soil	MDKTTGIALDLKTGVPTYQVEDEEGRTHLLIHPAIEEQNEDRWCLWRPDHAGFDSRSIFEGARVEK
Ga0307475_101218892	3300031754	Hardwood Forest Soil	MDETSGVALALKAGIPTYKVEDEEGRTHLLIHLTIEEPNEHRWCLWRPDHAGFDSRSIFEGALIEE
Ga0307475_103991081	3300031754	Hardwood Forest Soil	MDESLGASLGLKTSVPSYQVEDEEGRIHLLIHLAIEEQNECRWYLWRPDHAGFDSRSIFEGALIEE
Ga0307475_113659731	3300031754	Hardwood Forest Soil	LKTGVPTYQVEDEEGRTHLLIHLPIEEEDEERWCLWRPDHAGFDSRLIFEGALVEK
Ga0307478_100920733	3300031823	Hardwood Forest Soil	PDRFFKVLKFWMDETSGVALTLKAGVPTYQVEDEEGRTHLLIHLPVEEDGKKNRWCLWRPDHAGFDSRSIFEGALVEG
Ga0307478_102423301	3300031823	Hardwood Forest Soil	DDKPDRFFTVIKFWMDATSGVARELKTDVPTYQVEDEEGRTHLLIHLPIEEDGVNKRWCLWRPDHADL
Ga0307478_102723821	3300031823	Hardwood Forest Soil	ETSGVALDLKTGVPTYQVENEEGRTHLLIHLAIEEQNEHRWCLWRPDQAGFDSRSIFEGALVED
Ga0307478_114272102	3300031823	Hardwood Forest Soil	TGERIKPSPEIFEAKRGVPIRQVEDEEGRTHLLIHLTIDEQNEHRWCLWRPDHAGFDSRSIFESALIEE
Ga0307479_102072504	3300031962	Hardwood Forest Soil	MVIKFWMDATSGLALALKTGVPSYQVEDEEGRTHLLIHLPIEEEHEDRWCLWRPDHAGFDSRSIFDGALVEE
Ga0307479_107826042	3300031962	Hardwood Forest Soil	TGVPTYQVEDEEGRTHLLIHLAIEEQHEHRWCLWRPDHAGFDSRSIFEGALIEQ
Ga0307479_117371731	3300031962	Hardwood Forest Soil	DKTSGVALDLKTGVPTYQVEDEEGRTHLLIHLAIEEENEDRWCLWRPDHAGFDLSVRSHN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078268

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences