Metagenome Family F078165

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078165
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	55 residues
Representative Sequence	MPYIRDRDFARIRELVQTIEQLAEKEGHLSIPDIANRALKIMDKYIVELEEEERE
Number of Associated Samples	44
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.17 %
% of genes near scaffold ends (potentially truncated)	11.21 %
% of genes from short scaffolds (< 2000 bps)	70.69 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.793 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (44.828 % of family members)
Environment Ontology (ENVO)	Unclassified (47.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (50.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.37% β-sheet: 2.41% Coil/Unstructured: 54.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02830	V4R	23.85
PF03486	HI0933_like	6.42
PF13560	HTH_31	5.50
PF00108	Thiolase_N	3.67
PF02803	Thiolase_C	3.67
PF07992	Pyr_redox_2	2.75
PF01381	HTH_3	2.75
PF02597	ThiS	2.75
PF01977	UbiD	1.83
PF02913	FAD-oxidase_C	1.83
PF01012	ETF	1.83
PF02517	Rce1-like	1.83
PF00107	ADH_zinc_N	1.83
PF13495	Phage_int_SAM_4	0.92
PF09685	DUF4870	0.92
PF00085	Thioredoxin	0.92
PF02834	LigT_PEase	0.92
PF01266	DAO	0.92
PF13649	Methyltransf_25	0.92
PF00574	CLP_protease	0.92
PF04909	Amidohydro_2	0.92
PF04015	DUF362	0.92
PF01467	CTP_transf_like	0.92
PF01565	FAD_binding_4	0.92
PF13393	tRNA-synt_His	0.92
PF00005	ABC_tran	0.92
PF02516	STT3	0.92
PF13396	PLDc_N	0.92
PF03572	Peptidase_S41	0.92
PF01475	FUR	0.92
PF05635	23S_rRNA_IVP	0.92
PF01063	Aminotran_4	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1719	Predicted hydrocarbon binding protein, contains 4VR domain	General function prediction only [R]	23.85
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	12.84
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	12.84
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	7.34
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	6.42
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	6.42
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	6.42
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	6.42
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	6.42
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	6.42
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	6.42
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	6.42
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	6.42
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	6.42
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	2.75
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	2.75
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.83
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	1.83
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	1.83
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.83
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.83
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	1.83
COG1514	RNA 2',3'-cyclic phosphodiesterase (2'-5' RNA ligase)	Translation, ribosomal structure and biogenesis [J]	0.92
COG1287	Asparagine N-glycosylation enzyme, membrane subunit Stt3	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.92
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
All Organisms	root	All Organisms	36.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
cellular organisms	root	All Organisms → cellular organisms	36.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.55 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	14.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.03 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	6.03 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	3.45 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	6.03 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2.59 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	2.59 %
Candidatus Micrarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota	1.72 %
Theionarchaea	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	0.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.86 %
Candidatus Altiarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6.03 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	2.59 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	2.59 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2.59 %
unclassified Candidatus Micrarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota	1.72 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.86 %
Candidatus Altiarchaeales	order	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales	0.86 %
Theionarchaea	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	2.59 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	2.59 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.59 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.72 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.86 %
Candidatus Micrarchaeota archaeon CG1_02_55_22	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon CG1_02_55_22	0.86 %
unclassified Candidatus Altiarchaeales	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales	0.86 %
Candidatus Micrarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	0.86 %
Theionarchaea	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2.59 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.59 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.59 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.72 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.86 %
Candidatus Altiarchaeales archaeon ex4484_96	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon ex4484_96	0.86 %
Candidatus Micrarchaeota archaeon CG1_02_55_22	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon CG1_02_55_22	0.86 %
Candidatus Micrarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	0.86 %
Theionarchaea	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	2.59 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.59 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.59 %
Desulfosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	0.86 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.86 %
Candidatus Altiarchaeales archaeon ex4484_96	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon ex4484_96	0.86 %
Candidatus Micrarchaeota archaeon CG1_02_55_22	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon CG1_02_55_22	0.86 %
Candidatus Micrarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	0.86 %
Theionarchaea	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.79 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	2.59 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.59 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.59 %
Desulfosarcina variabilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	0.86 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.86 %
Candidatus Altiarchaeales archaeon ex4484_96	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon ex4484_96	0.86 %
Candidatus Micrarchaeota archaeon CG1_02_55_22	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon CG1_02_55_22	0.86 %
Candidatus Micrarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	0.86 %
Theionarchaea	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000231\|TB_LI09_4DRAFT_10208238	All Organisms → cellular organisms → Archaea → DPANN group	635	Open in IMG/M
3300003145\|Ga0052243_1039294	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	765	Open in IMG/M
3300005254\|Ga0068714_10234862	Not Available	754	Open in IMG/M
3300005839\|Ga0068707_1081528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1273	Open in IMG/M
3300005917\|Ga0075115_10004046	All Organisms → cellular organisms → Bacteria	6639	Open in IMG/M
3300009034\|Ga0115863_1172294	All Organisms → cellular organisms → Archaea → TACK group	2630	Open in IMG/M
3300009034\|Ga0115863_1190937	Not Available	2474	Open in IMG/M
3300009034\|Ga0115863_1216936	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300009034\|Ga0115863_1377682	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1649	Open in IMG/M
3300009034\|Ga0115863_1377682	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1649	Open in IMG/M
3300009034\|Ga0115863_1385762	Not Available	1627	Open in IMG/M
3300009034\|Ga0115863_1385762	Not Available	1627	Open in IMG/M
3300009034\|Ga0115863_1385762	Not Available	1627	Open in IMG/M
3300009034\|Ga0115863_1421546	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300009127\|Ga0118724_1010174	All Organisms → cellular organisms → Bacteria	10844	Open in IMG/M
3300009127\|Ga0118724_1024045	All Organisms → cellular organisms → Bacteria	5568	Open in IMG/M
3300009127\|Ga0118724_1032144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4377	Open in IMG/M
3300009127\|Ga0118724_1088901	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1882	Open in IMG/M
3300009127\|Ga0118724_1154570	Not Available	1205	Open in IMG/M
3300009127\|Ga0118724_1248041	Not Available	815	Open in IMG/M
3300009150\|Ga0114921_10052724	Not Available	2552	Open in IMG/M
3300009150\|Ga0114921_10138925	Not Available	1656	Open in IMG/M
3300009150\|Ga0114921_10144228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1627	Open in IMG/M
3300009150\|Ga0114921_10165616	Not Available	1525	Open in IMG/M
3300009150\|Ga0114921_10358001	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300009150\|Ga0114921_10363452	Not Available	1042	Open in IMG/M
3300009150\|Ga0114921_10539531	Not Available	855	Open in IMG/M
3300009150\|Ga0114921_10590247	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	816	Open in IMG/M
3300009150\|Ga0114921_10695509	Not Available	751	Open in IMG/M
3300009150\|Ga0114921_10786813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	705	Open in IMG/M
3300009150\|Ga0114921_11366636	Not Available	531	Open in IMG/M
3300009150\|Ga0114921_11488531	Not Available	507	Open in IMG/M
3300009488\|Ga0114925_10272415	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1142	Open in IMG/M
3300009488\|Ga0114925_10494509	Not Available	856	Open in IMG/M
3300009488\|Ga0114925_11137899	Not Available	571	Open in IMG/M
3300009494\|Ga0127413_10131296	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon CG1_02_55_22	1039	Open in IMG/M
3300009499\|Ga0114930_10112964	Not Available	1491	Open in IMG/M
3300009499\|Ga0114930_10280761	All Organisms → cellular organisms → Archaea	806	Open in IMG/M
3300009499\|Ga0114930_10389029	Not Available	648	Open in IMG/M
3300009528\|Ga0114920_10029922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3168	Open in IMG/M
3300009528\|Ga0114920_10088102	All Organisms → cellular organisms → Archaea	1960	Open in IMG/M
3300009528\|Ga0114920_10167470	Not Available	1448	Open in IMG/M
3300009528\|Ga0114920_10376351	Not Available	963	Open in IMG/M
3300009528\|Ga0114920_10430006	Not Available	898	Open in IMG/M
3300009528\|Ga0114920_10447020	Not Available	880	Open in IMG/M
3300009528\|Ga0114920_10512519	Not Available	818	Open in IMG/M
3300009528\|Ga0114920_10520162	All Organisms → cellular organisms → Archaea	812	Open in IMG/M
3300009528\|Ga0114920_10630164	Not Available	733	Open in IMG/M
3300009528\|Ga0114920_10905804	Not Available	604	Open in IMG/M
3300009528\|Ga0114920_11037127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	562	Open in IMG/M
3300009528\|Ga0114920_11210831	Not Available	518	Open in IMG/M
3300009529\|Ga0114919_10438710	Not Available	905	Open in IMG/M
3300009943\|Ga0117933_1659843	Not Available	702	Open in IMG/M
3300010328\|Ga0129298_10076922	Not Available	1584	Open in IMG/M
3300010328\|Ga0129298_10238662	Not Available	845	Open in IMG/M
3300010328\|Ga0129298_10445596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	591	Open in IMG/M
3300010330\|Ga0136651_10459180	Not Available	623	Open in IMG/M
3300010413\|Ga0136851_10314545	Not Available	1587	Open in IMG/M
3300012964\|Ga0153916_10586718	Not Available	1190	Open in IMG/M
3300013103\|Ga0164318_10388680	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon ex4484_96	1221	Open in IMG/M
3300013103\|Ga0164318_10736367	Not Available	829	Open in IMG/M
3300014911\|Ga0180301_10095671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1847	Open in IMG/M
3300015370\|Ga0180009_10021660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5120	Open in IMG/M
3300015370\|Ga0180009_10041670	Not Available	3041	Open in IMG/M
3300017971\|Ga0180438_10998710	Not Available	606	Open in IMG/M
3300020074\|Ga0194113_10905342	Not Available	596	Open in IMG/M
3300022548\|Ga0212092_1005950	All Organisms → cellular organisms → Bacteria	10381	Open in IMG/M
3300022551\|Ga0212089_10500108	Not Available	539	Open in IMG/M
3300022551\|Ga0212089_10553195	Not Available	506	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10321618	Not Available	659	Open in IMG/M
3300023262\|Ga0222639_1024061	Not Available	1626	Open in IMG/M
3300024263\|Ga0209978_10007259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5185	Open in IMG/M
3300024263\|Ga0209978_10034118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2536	Open in IMG/M
3300024263\|Ga0209978_10122193	Not Available	1334	Open in IMG/M
3300024263\|Ga0209978_10211371	Not Available	984	Open in IMG/M
3300024263\|Ga0209978_10342085	Not Available	739	Open in IMG/M
3300024353\|Ga0209979_1165720	Not Available	809	Open in IMG/M
3300024429\|Ga0209991_10135515	Not Available	1229	Open in IMG/M
3300024429\|Ga0209991_10170020	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300024429\|Ga0209991_10181638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1041	Open in IMG/M
3300024429\|Ga0209991_10246254	Not Available	870	Open in IMG/M
3300024429\|Ga0209991_10286574	All Organisms → cellular organisms → Archaea	793	Open in IMG/M
3300024429\|Ga0209991_10376614	Not Available	667	Open in IMG/M
3300024433\|Ga0209986_10381513	Not Available	647	Open in IMG/M
3300027893\|Ga0209636_10136447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	2320	Open in IMG/M
3300027893\|Ga0209636_10142758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2258	Open in IMG/M
3300027893\|Ga0209636_10146795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2220	Open in IMG/M
3300027893\|Ga0209636_11033693	Not Available	600	Open in IMG/M
3300027901\|Ga0209427_10369652	Not Available	1118	Open in IMG/M
3300031707\|Ga0315291_10429827	Not Available	1247	Open in IMG/M
3300031772\|Ga0315288_10259399	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1843	Open in IMG/M
3300031772\|Ga0315288_11317153	Not Available	612	Open in IMG/M
3300031862\|Ga0315280_10024557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	6222	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1132586	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	984	Open in IMG/M
(restricted) 3300031898\|Ga0315312_1108664	Not Available	870	Open in IMG/M
3300031949\|Ga0214473_10605010	Not Available	1209	Open in IMG/M
3300032069\|Ga0315282_10660415	Not Available	551	Open in IMG/M
3300032118\|Ga0315277_10023428	All Organisms → cellular organisms → Bacteria	7463	Open in IMG/M
3300032156\|Ga0315295_11046631	Not Available	808	Open in IMG/M
3300032163\|Ga0315281_10540982	Not Available	1234	Open in IMG/M
3300032163\|Ga0315281_11119259	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	791	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Engineered	Engineered	0.86%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.28%
Terrestrial	Environmental → Terrestrial	0.86%
Lab Enrichment	Engineered → Lab Enrichment	0.86%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	73.28%
Freshwater	Environmental → Aquatic → Freshwater	18.97%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.59%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.59%
Sediment	Environmental → Aquatic → Sediment	0.86%
Soil	Environmental → Terrestrial → Soil	0.86%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.86%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	51.72%
Lake	Environmental → Aquatic → Freshwater → Lake	15.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.21%
Coastal	Environmental → Aquatic → Marine → Coastal	5.17%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	3.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.59%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.59%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.86%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.86%
Cold Seeps	Environmental → Aquatic → Marine → Cold Seeps	0.86%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.86%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	0.86%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	51.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.79%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	11.21%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.17%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.86%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.86%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.86%
Sediment	Environmental → Aquatic → Marine → Cold Seeps → Sediment	0.86%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.86%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.86%
Microbial Mats	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats	0.86%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.86%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	44.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.48%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	7.76%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	6.90%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	5.17%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	4.31%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	3.45%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	2.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.72%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.86%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.86%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.86%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	0.86%
Marine Hydrothermal Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent	0.86%
Methane Seep Sediment	Environmental → Aquatic → Marine → Cold Seeps → Sediment → Methane Seep Sediment	0.86%
Anoxygenic And Chlorotrophic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic	0.86%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Fe-Si Sediment	0.86%
Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats → Hot Spring Microbial Mat	0.86%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.86%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.86%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.86%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.86%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000231	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_4	Environmental	Open in IMG/M
3300001782	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_deep_samples	Environmental	Open in IMG/M
3300003145	Marine sediment microbial communities from deep subseafloor - Sample from 0.8 mbsf	Environmental	Open in IMG/M
3300005254	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG	Engineered	Open in IMG/M
3300005839	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP MetaG	Environmental	Open in IMG/M
3300005917	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKH	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009127	Combined Assembly of Gp0137036, Gp0137038	Environmental	Open in IMG/M
3300009150	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009494	Marine sediment microbial communities from Chincoteague Deepwater methane seep, US Atlantic Margin - Chincoteague Seep MUC-5 12-14 cmbsf	Environmental	Open in IMG/M
3300009499	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG	Environmental	Open in IMG/M
3300009528	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009943	Combined Assembly of Gp0139325, Gp0139347, Gp0139348	Environmental	Open in IMG/M
3300010328	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG	Environmental	Open in IMG/M
3300010330	Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaG	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013103	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay9, Core 4571-4, 0-3 cm	Environmental	Open in IMG/M
3300014911	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay16, Core 4569-2, 12-15 cm	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300022548	Cone Pool_combined assembly	Environmental	Open in IMG/M
3300022551	Boni_combined assembly	Environmental	Open in IMG/M
3300023177 (restricted)	Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MG	Environmental	Open in IMG/M
3300023262	Saline water microbial communities from Ace Lake, Antarctica - #185	Environmental	Open in IMG/M
3300024263	Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)	Environmental	Open in IMG/M
3300024353	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG (SPAdes)	Environmental	Open in IMG/M
3300024429	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG (SPAdes)	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031877 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9	Environmental	Open in IMG/M
3300031898 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP7	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_LI09_4DRAFT_102082381	3300000231	Groundwater	MPYVRDRDFARIQELVRTIQQLSEKEAHSSIPDIAGRALKIMDKYIVEHEEDEKE*
WOR52_1001088012	3300001782	Marine Sediment	MPYIRERDFTRVRELVETVKELSEKGEYLSIPDIITRALKVMERYVVEEEKEKKK*
WOR52_1001088013	3300001782	Marine Sediment	MPYIRGRDFTRIRELVETVKELSEKKEYLSIPGITTRALTVMERYVVEEEEEEKE*
WOR52_100301551	3300001782	Marine Sediment	MPYIRERDFTRVRELVETVKELSEKKEYLSIPGITTRALTVMERYVVGEEEEEKE*
WOR52_100301552	3300001782	Marine Sediment	MPYIRGRDFTRIRELVETVKELSEKKEYLSIPDITTRALKVMKRYVVEEEEEEKE*
Ga0052243_10392942	3300003145	Marine Sediment	MPYIRDRDFARINELVLTIKQLSEKEGYVSIPDIAARALKIMDRYIVEAEEEE*
Ga0068714_102348621	3300005254	Enrichment Culture	MPYIRDRDFARINELVLTIKQLSEKEGYVSIPDIASRALKIMERYIVEAEDED*
Ga0068707_10815283	3300005839	Anoxygenic And Chlorotrophic	ARIQELVRTIQQLAEKEAHSSIPDIAGRALKIMDKYIVEREEDDRE*
Ga0075115_100040466	3300005917	Saline Lake	MPYIRDRDFARLRELMETIAQLSQKEGHLAIPDITDRAIKIMDKYIVIEVEDEDKE*
Ga0115863_11722944	3300009034	Sediment, Intertidal	MPYIRDRDFARIRELLQTIEELSKKEGHSSIPDIASRALRIIDKYIIEELEEGEKG*
Ga0115863_11909374	3300009034	Sediment, Intertidal	MPYIRDRDFARINELVQTLKQLAEKEGYVSIPDIAARALKIMERYIVETEEEE*
Ga0115863_12169364	3300009034	Sediment, Intertidal	MPYVRDKDFARINELVQTLKQLAEKDGHVHIPDIACRALRIMEKYFVETEEQEKEL*
Ga0115863_13776821	3300009034	Sediment, Intertidal	MPYIRDKDFARVGELLATIEELAEKGENHSIPDIASRALKVIERYIVEREDEEKQP*
Ga0115863_13776822	3300009034	Sediment, Intertidal	MPYIRDRDFARVGELLQTIKELAKKGENDSVPDIASRALKVIERYIVEREEVEK*
Ga0115863_13857621	3300009034	Sediment, Intertidal	MPYIRDRDFARIVELLATIEELSEKGENDSVPDIASRALKVIERYIVEREEVEK*
Ga0115863_13857623	3300009034	Sediment, Intertidal	VRPYLTIGEGDMPYIRDRDFARIKELLATIKELTKKGENDSVPDIAARALKVMARYIVEREEEE*
Ga0115863_13857624	3300009034	Sediment, Intertidal	MPYIRDRDFARVGELLQTIKELAKKGENDSVPDIATRALKVMAKYVVEPEEEEK*
Ga0115863_14215462	3300009034	Sediment, Intertidal	MPYIGDRDFAEIRELLETIQELAERKEHLFIPDIAVRALKVIRKYIVEPEEEK*
Ga0118724_10101742	3300009127	Marine	MPYIRDKDFARIRELVETIEQLAEKEGHASLPDIANRALKIMDKYIVELEEEEKE*
Ga0118724_10240453	3300009127	Marine	MKGRTMPYVRDRDFARMRELVETIVQLAKKERNSSIPDIAERTLKVMDKYIAYLESEEEGDLNT*
Ga0118724_10321442	3300009127	Marine	MPYIRDRDFARINELVQTIKQLAEKEGHVSIPDIAGRALKIMERYIVEEEEEE*
Ga0118724_10889012	3300009127	Marine	MPYIRDRDFARINELVLTIKQLSEKEGYVSIPDIAARALKIMERYIVEAEEEE*
Ga0118724_11545703	3300009127	Marine	MPYIRDRDFARINELVLTIKQLAEKEGYSSLPDIAARALKIMERYIVEAEEEE*
Ga0118724_12480412	3300009127	Marine	MPYIRDRDFARIRELLETIKELSEKEGNGSCPDIATRALKVMEKYIVEPEEKEMV*
Ga0114921_100527243	3300009150	Deep Subsurface	MPYIRDRDFARIKELLETIKELSEKEGNGSCPDIATRAVKVMEKYIVELEEKEKE*
Ga0114921_101389252	3300009150	Deep Subsurface	MPYIRERDFARVRELLETIEELAGRGKNGSTRDIVARALKVMGKYVVEPEEEEK*
Ga0114921_101442282	3300009150	Deep Subsurface	MPYIRDRDFTRMRELVETIKELSEKKEFLSVPDIAIRALKVMGKYIVELEEEEKK*
Ga0114921_101656161	3300009150	Deep Subsurface	MPYIRDRDFARINELVQTLKQLAEKEGYVSIPDIAARALKIMDRYIVETEEEE*
Ga0114921_103580012	3300009150	Deep Subsurface	MPYIRDKDFARIKELLETIEELGKKAHNGSIPEIATRALKVMERYIVELEEEKRKSRHS*
Ga0114921_103634521	3300009150	Deep Subsurface	FARINELVHTLKQLAEKDEHVHIPDIACRALKIMEKYFVETEEQEKEL*
Ga0114921_105279291	3300009150	Deep Subsurface	MPYIRERDFTRIRELVETIKELSEKENHLSIPAIAIRALKVMRKYIVQSEEEEKE*
Ga0114921_105395312	3300009150	Deep Subsurface	MPYIRDKDFARIKELLETIEELGKKEHNGSIPDIATRAIRVMERYIVEQEEE*
Ga0114921_105902472	3300009150	Deep Subsurface	LKTEEASMPYIRDRDFARINELVQTLKQLSEKEGYVSIPDIAARALKIMERYIVEAEEEE
Ga0114921_106955092	3300009150	Deep Subsurface	MPYIRDRDFARINELIQTIKQLAEKEGHVSIPDIAGRALKIMERYIVEEEEE*
Ga0114921_107868133	3300009150	Deep Subsurface	MPYVRDKDFARINELVQTLRQLAEKEGHVHIPDIACRALKIMEKYFVETEEQEKEL*
Ga0114921_113666361	3300009150	Deep Subsurface	MPYIRDKDFARIKELLETIEELSEKNVNGSIPDIAARALKVMDKYIVELEEKEKV*
Ga0114921_114885311	3300009150	Deep Subsurface	MPYIRDRDFARIRELIQTIEQLAEKEGHLSLPDIANRALKIMDKYIVELEEEEKE*
Ga0114925_102724153	3300009488	Deep Subsurface	MPYVRDKDFARINELVQTLKQLAEKEGHVHIPDIACRALRIMEKYFVETEEQEKEL*
Ga0114925_104945092	3300009488	Deep Subsurface	MPYIRDRDFARINELVQTLRQLAEKEGHVSIPDIAIRALRIMERYSVETEQQEKE*
Ga0114925_111378991	3300009488	Deep Subsurface	LKFEEAIMPYIRDRDFARINELVQTLKQLSEKEGYVSIPDIAARALKIMERYIVEAEEEE
Ga0127413_101312961	3300009494	Methane Seep Sediment	MPYIRDRDFARIRELVQTIEQLSAKENHSAIPDISDRALKIMAKYFVDI
Ga0114930_100985213	3300009499	Deep Subsurface	MPYIRERDFTRIRELVETIKELSEKENHLSIPDIAIRALKVMRKYIVQSEEEEKE*
Ga0114930_101129642	3300009499	Deep Subsurface	MPYIRDKDFARIKELLETIEELGKKEHNGSIPDIATRAIRVMERYIVELAEEEQA*
Ga0114930_102807612	3300009499	Deep Subsurface	MPYVRDRDFARIKELVETIEQLTEKEGHGSIPDIANRALKIMDKYIVELEEEEKE*
Ga0114930_103890291	3300009499	Deep Subsurface	VPYVKDRDFARIRELLQTIEQLAKKEGHFSIPDIVNRAINIMDKYIVEELEEEKE*
Ga0114920_100299224	3300009528	Deep Subsurface	MPYVRDKDFARINELVQTLRQLAEKEGHVHIPDIACRALRIMEKYFVETEEQEKEL*
Ga0114920_100881023	3300009528	Deep Subsurface	MPYIRDRDFTRMRELVETIKELSEKKEFLSLPDIAIRALKVMGKYVVELEEEEKE*
Ga0114920_101674703	3300009528	Deep Subsurface	MPYIRDRDFARVVELVETIKELSEKDEHRSVPDIAARALKVMEKYIVELEAEEKR*
Ga0114920_103763511	3300009528	Deep Subsurface	MPYIRDKDFARIRELVATIKQLAEKERHLSIPDIATRALNIMEKYVVELEEEEKE*
Ga0114920_104300061	3300009528	Deep Subsurface	MPYIRDNDFARVRELVETIKELTEKGEDGSIPDIAARALKVMGKYIVERGEGEE*
Ga0114920_104470202	3300009528	Deep Subsurface	MPYIRDRDFARIKELLETIKELSEKEGNGSCPDIATRAVKVMEKYIVEPEEKEKE*
Ga0114920_105125192	3300009528	Deep Subsurface	MEGSMPYIRDRDFARIRELVATIEELSKKENHLSIPDIATRTLKVMGKYIVDPEEEEKE*
Ga0114920_105201621	3300009528	Deep Subsurface	MPYIRDKDFARIKELLETIEELGKKEHNGSIPDIATRALKVMERYIVEQEEE*
Ga0114920_105465372	3300009528	Deep Subsurface	MPYIRERDFTRIRELVDTIKELSEKGEYLSIPNIATRALKVMHKYIVQLEEDEKE*
Ga0114920_106301642	3300009528	Deep Subsurface	MPYVRDKDFARIKELLETIEELGKKEHNGYIPDIATRAIRVMERYIVEQEEE*
Ga0114920_107560691	3300009528	Deep Subsurface	MRKEGSMPYIRERDFTRVRELLETIKELSEKEGNGVCPDIATRALKVMEKYIVELEEEKV
Ga0114920_108122812	3300009528	Deep Subsurface	MPYIRESDFARIRELVETIKELSEKGENGSVADIAIRALKVMRKYIVQSEEEEKE*
Ga0114920_108216162	3300009528	Deep Subsurface	MPYIRESDFTRIRELVDTIKELSEKGENGSVADIAVRALKVMRKYIVQSEEEEKE*
Ga0114920_109058042	3300009528	Deep Subsurface	LKSEEASMPYIRDRDFARINELVQTLKQLAEKEGYVSIPDIAARALKIMDRYIVETEEEE
Ga0114920_110371271	3300009528	Deep Subsurface	NMPYIRDRDFARINELVQTIKQLAEKEGHGSIPDIANRALKIMDKYIVELEEEGKE*
Ga0114920_112108312	3300009528	Deep Subsurface	MPHIRDRDFSRIKELVQTIKQLEEKEGHLSIPDIATRALEIMDKYIVEEEEKE*
Ga0114919_104387101	3300009529	Deep Subsurface	MPYVRDRDFTRMRELVETIKELSEKKEFLSIPDIAIRALKVMGKYIVELEEEERK*
Ga0117933_16598431	3300009943	Hot Spring Fe-Si Sediment	MPYVRDRDFARIQELVRTIQQLAEKEAHSSIPDIAGRALKIMDKYIVEREEDERE*
Ga0129298_100769222	3300010328	Lake Sediment	MPYIRDKDFARIRELVATIKQLAEKEGHLSIPDIDTRALNIMEKYVVELEEEKE*
Ga0129298_102386622	3300010328	Lake Sediment	MPYIRDRDFARIRELVQTIEQLAKKEGHPSIPDIANRALKVMDKYVVELEEDEKE*
Ga0129298_104455961	3300010328	Lake Sediment	MPYIRDRDFARIRELVQTIEQLAEKEGHLSIPDIANRALKIMDKYIVELEEEERE*
Ga0136651_104591802	3300010330	Marine Hydrothermal Vent	NMPYVRDRDFARIRELVKTIEHLSSKEKLPAIPDISKRALRIMEKYFVDIEGEEE*
Ga0136851_103145452	3300010413	Mangrove Sediment	MPYIRDRDFARINELVLTLKQLAEKEGYSSLPDIAARALKIMERYIVEAEEEE*
Ga0153916_105867182	3300012964	Freshwater Wetlands	LPIKSKEADMPYIRDRDFARINELVQTMKQLAEKEKDSSLPAIADRALKIMEKYIVETDEEE*
Ga0164318_103886801	3300013103	Marine Sediment	MPYIRDRDFARIRELVKTIEDLSLKDGHSSIPDISKRAIKIMSKYFVDIERDED*
Ga0164318_107363672	3300013103	Marine Sediment	MPYVRDRDFARIRELVKTIEHLSSKEKLPAIPDISKRALRIMEKYFVDIEGEEE*
Ga0180301_100956712	3300014911	Marine Sediment	MPYIRDRDFARIRELVQTIEELASKEGHPSVPDIANRALRIMDKYIVEELEKEEKE*
Ga0180009_100216603	3300015370	Groundwater	MPYIRDRDFARINELVLTLKQLAEKEGYTSLPDIAARALKIMERYIVEAEEEE*
Ga0180009_100416702	3300015370	Groundwater	MPYIRARDFARIKELLETIKELSEKEGNGSCPHIATRAVKVMEKYIVELEEKEKE*
Ga0180438_109987102	3300017971	Hypersaline Lake Sediment	MPYIRDRDFARINELVLTIKQLSEKEGYVSIPDIASRALKIMERYIVEAEDED
Ga0194113_109053421	3300020074	Freshwater Lake	MPYIRDRDFARINELVQTIKQLSEKEGYVSIPDIAARALKIMERYIVETEEEE
Ga0212092_10059503	3300022548	Hot Spring Microbial Mat	MPYVRDRDFARIQELVRTIQQLAEKEAHSSIPDIAGRALKIMDKYIVEREEDERE
Ga0212089_105001081	3300022551	Lake Sediment	MPYIRDRDFARIRELVQTIEQLAKKEGHPSIPDIANRALKVMDKYVVELEEDEKE
Ga0212089_105531952	3300022551	Lake Sediment	MPYIRDRDFARINELVQTMKQLAEKDKDSSLPAIADRALKIMDKY
(restricted) Ga0233423_103216182	3300023177	Freshwater	MPYVRDRDFARIQELVRTIQQLSEKEAHSAVPDIAGRALKIMDKYIVETDEDEK
Ga0222639_10240612	3300023262	Saline Water	MPYIRDRDFARLRELMETIAQLSQKEGHLAIPDITDRAIKIMDKYIVIEVEDEDKE
Ga0209978_100072595	3300024263	Deep Subsurface	MPYIRDRDFARIKELLETIKELSEKEGNGSCPDIATRAVKVMEKYIVELEEKEKE
Ga0209978_100341185	3300024263	Deep Subsurface	MPYVRDRDFARIRELVQTIQQLAEKEGHGSIPDIANRALKIMDKYIVELEEEEKE
Ga0209978_101221931	3300024263	Deep Subsurface	RDRDFARINELVQTLKQLSEKEGYVSIPDIAARALKIMERYIVEAEEEE
Ga0209978_102113712	3300024263	Deep Subsurface	MPYIRERDFARVRELLETIEELAGRGKNGSTRDIVARALKVMGKYVVEPEEEEK
Ga0209978_103420851	3300024263	Deep Subsurface	MPYIRDKDFARIKELLETIEELGKKEHNGSIPDIATRAIRVMERYIVEQEEE
Ga0209978_104875961	3300024263	Deep Subsurface	MPYIRERDFTRIRELVETIKELSEKKELLSIPDIAIRALKVMGKYIVELEEEEKK
Ga0209979_11657202	3300024353	Deep Subsurface	MPYIRDKDFARIKELLETIEELGKKEHNGSIPDIATRAIRVMERYIVELAEEEQA
Ga0209991_100266594	3300024429	Deep Subsurface	MPYIRESDFTRIRELVDTIKELSEKGENGSVADIAVRALKVMRKYIVQSEEEEKE
Ga0209991_101355151	3300024429	Deep Subsurface	MPYIRDRDFTRMRELVETIKELSEKKEFLSLPDIAIRALKVMGKYVVELEEEEKE
Ga0209991_101700202	3300024429	Deep Subsurface	MPYIRDRDFARIRELVATIEELSKKENHLSIPDIATRTLKVMGKYIVDPEEEEKE
Ga0209991_101816381	3300024429	Deep Subsurface	MPYVRDKDFARINELVQTLRQLAEKEGHVHIPDIACRALRIMEKYFVETEEQEKEL
Ga0209991_102462541	3300024429	Deep Subsurface	MPYIRDRDFARIKELLETIKELSEKEGNGSCPDIATRAVKVMEKYIVEPEEKEKE
Ga0209991_102865742	3300024429	Deep Subsurface	MPYVRDKDFARIKELLETIEELGKKEHNGYIPDIATRAIRVMERYIVEQEEE
Ga0209991_103766142	3300024429	Deep Subsurface	KDFARIRELVATIKQLAEKERHLSIPDIATRALNIMEKYVVELEEEEKE
Ga0209986_103815132	3300024433	Deep Subsurface	MPYIRDRDFTRMRELVETIKELSEKKEFLSVPDIAIRALKVMGKYIVELEEEEKK
Ga0209636_100276964	3300027893	Marine Sediment	MPYIRERDFTRVRELVETVKELSEKGEYLSIPDIITRALKVMERYVVEEEKEKKK
Ga0209636_100276965	3300027893	Marine Sediment	MPYIRERDFTRVRELVETVKELSEKKEYLSIPGITTRALTVMERYVVEEEEEEKK
Ga0209636_100276966	3300027893	Marine Sediment	MPYIRGRDFTRIRELVETVKELSEKKEYLSIPDITTRALKVMKRYVVEEEEEEKE
Ga0209636_101364474	3300027893	Marine Sediment	KEIIMPYIRDRDFARINELLQTIKQLAEKEGYRSIPDIAIRALKTMDKYIVETEEERD
Ga0209636_101427581	3300027893	Marine Sediment	MPYIRDRDFARINELVQTVKQLSEKEGYVSIPDIAARALKIMERYIVETEEEE
Ga0209636_101467952	3300027893	Marine Sediment	MPYVRDRDFARIRELVETIEQLAEKEGYASLPDIANRALKIMDRYIVELEEEEKE
Ga0209636_110336931	3300027893	Marine Sediment	MPYIRDKDFARIRELVATVKQLAEKEGNLAIPAIATRALTIMEKYVVEPEEEKE
Ga0209427_103696521	3300027901	Marine Sediment	MPYIRDRDFARINELVQTIKQLAEKEGHLSIPDIATRALKIMEKYIMEAEEE
Ga0315291_104298272	3300031707	Sediment	MPYIRDRDFARINELVQTVKQLAEKEKDSSLPAIADRALKIMEKYIVETDEEE
Ga0315288_102593991	3300031772	Sediment	MPYIRDRDFARIRELVQTIEQLAKKEGHPSIPDIANRALKVMDKYVVELEEEEKE
Ga0315288_113171532	3300031772	Sediment	SKEADMPYIRDRDFARINELVQTVKQLAEKEKDSSLPAIADRALKIMEKYIVETDEEE
Ga0315280_100245575	3300031862	Sediment	MPYIRDKDFARIRELVATIKQLAEKEGHLSIPDIATRALNIMEKYVVELEEEKE
(restricted) Ga0315314_11325862	3300031877	Sediment	MPYIRDRDFARIRELVQTIEQLAEKEGHLSIPDIANRALKIMDKYIVELEEEERE
(restricted) Ga0315312_11086642	3300031898	Sediment	MPYVRDRDFARIRELVATIKQLAEKEGHLSIPDIAARALNIMEKYIVELEEEKE
Ga0214473_106050102	3300031949	Soil	MPYIRDRDFARINELVQTMKQLAEKEKDSSLPAIADRALKIMEKYIVETDEEE
Ga0315282_106604152	3300032069	Sediment	DFARINELVQTMKQLAEKEKDSSLPAIADRALKIMDKYIVETDEEE
Ga0315277_100234289	3300032118	Sediment	MPYIRDRDFARIKELVQTIEELGSKEGNPAIPGIAKRALVIMDKYVVEEIEKEENG
Ga0315295_110466312	3300032156	Sediment	MPYIRDRDFARINELVQTMKQLAEKDKDSSLPAIADRALKIMEKYIVETEEEE
Ga0315281_105409822	3300032163	Sediment	MPYIRDRDFARINELVQTMKQLAEKEKDSSLPAIADRALKIMDKYIVETDEEE
Ga0315281_111192591	3300032163	Sediment	MPYIRDRDFARIRELVQTIEQLAKKEGHPSIPDIANRALKVMDKYVVELAEEEKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters