Metagenome Family F077749

Basic Information
Family ID	F077749
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	92 residues
Representative Sequence	MHDDHLMDQLLRDTMAAPPPQLSPAFDARVMRRVRPRRLTPTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD
Number of Associated Samples	103
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.09 %
% of genes near scaffold ends (potentially truncated)	25.64 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (83.761 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.256 % of family members)
Environment Ontology (ENVO)	Unclassified (35.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.410 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.98% β-sheet: 0.00% Coil/Unstructured: 39.02%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF08281	Sigma70_r4_2	58.97
PF13649	Methyltransf_25	5.13
PF04542	Sigma70_r2	4.27
PF12847	Methyltransf_18	2.56
PF13442	Cytochrome_CBB3	0.85
PF13505	OMP_b-brl	0.85
PF08241	Methyltransf_11	0.85
PF02687	FtsX	0.85
PF03631	Virul_fac_BrkB	0.85
PF00160	Pro_isomerase	0.85
PF14031	D-ser_dehydrat	0.85
PF01740	STAS	0.85
PF08327	AHSA1	0.85
PF13385	Laminin_G_3	0.85
PF03737	RraA-like	0.85
PF13302	Acetyltransf_3	0.85
PF04995	CcmD	0.85
PF13462	Thioredoxin_4	0.85
PF00583	Acetyltransf_1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	4.27
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	4.27
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	4.27
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	4.27
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.85
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.85
COG3114	Heme exporter protein D	Intracellular trafficking, secretion, and vesicular transport [U]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.76 %
Unclassified	root	N/A	16.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.76 %
Unclassified	root	N/A	16.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.76 %
Unclassified	root	N/A	16.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	4.27 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Acidobacteria bacterium SCN 69-37	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	4.27 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	2.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Acidobacteria bacterium SCN 69-37	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	4.27 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	2.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Acidobacteria bacterium SCN 69-37	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	4.27 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Micropruina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Micropruina	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Acidobacteria bacterium SCN 69-37	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.24 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	4.27 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Micropruina glycogenica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Micropruina → Micropruina glycogenica	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Acidobacteria bacterium SCN 69-37	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101729107	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300004114\|Ga0062593_100150442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1764	Open in IMG/M
3300004156\|Ga0062589_100838155	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300004463\|Ga0063356_100767111	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300004463\|Ga0063356_101516878	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300004463\|Ga0063356_101911931	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005093\|Ga0062594_100470059	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005293\|Ga0065715_10455983	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005335\|Ga0070666_10133377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCN 69-37	1727	Open in IMG/M
3300005337\|Ga0070682_100127919	All Organisms → cellular organisms → Bacteria → Acidobacteria	1715	Open in IMG/M
3300005338\|Ga0068868_101143110	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005341\|Ga0070691_10406701	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005347\|Ga0070668_100630648	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005353\|Ga0070669_100213239	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300005356\|Ga0070674_100597433	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005365\|Ga0070688_100585906	Not Available	852	Open in IMG/M
3300005367\|Ga0070667_100497927	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300005459\|Ga0068867_100164608	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300005466\|Ga0070685_10048599	All Organisms → cellular organisms → Bacteria	2444	Open in IMG/M
3300005543\|Ga0070672_101205000	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005578\|Ga0068854_101606899	Not Available	592	Open in IMG/M
3300005616\|Ga0068852_100408615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300005618\|Ga0068864_100637582	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005713\|Ga0066905_102239107	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005764\|Ga0066903_104436442	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300006046\|Ga0066652_100478211	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300006049\|Ga0075417_10112815	Not Available	1242	Open in IMG/M
3300006169\|Ga0082029_1446354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2331	Open in IMG/M
3300006358\|Ga0068871_100324040	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300006358\|Ga0068871_102211808	Not Available	524	Open in IMG/M
3300006844\|Ga0075428_100095830	All Organisms → cellular organisms → Bacteria	3235	Open in IMG/M
3300006844\|Ga0075428_101763219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	645	Open in IMG/M
3300006845\|Ga0075421_100054381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5064	Open in IMG/M
3300006845\|Ga0075421_100615730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1274	Open in IMG/M
3300009091\|Ga0102851_10978550	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300009094\|Ga0111539_10266540	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300009100\|Ga0075418_12564985	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300009156\|Ga0111538_10437056	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300009174\|Ga0105241_10270030	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300009553\|Ga0105249_12635522	Not Available	575	Open in IMG/M
3300010362\|Ga0126377_10000639	All Organisms → cellular organisms → Bacteria	21619	Open in IMG/M
3300010397\|Ga0134124_12032008	Not Available	612	Open in IMG/M
3300010400\|Ga0134122_10000113	All Organisms → cellular organisms → Bacteria	44462	Open in IMG/M
3300010400\|Ga0134122_10834214	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300010400\|Ga0134122_12918430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	532	Open in IMG/M
3300010403\|Ga0134123_13005732	Not Available	540	Open in IMG/M
3300011429\|Ga0137455_1081028	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300011445\|Ga0137427_10097246	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300012212\|Ga0150985_112068152	Not Available	755	Open in IMG/M
3300012212\|Ga0150985_119721177	All Organisms → cellular organisms → Bacteria	2936	Open in IMG/M
3300012469\|Ga0150984_113941118	Not Available	1319	Open in IMG/M
3300012685\|Ga0137397_11273057	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012912\|Ga0157306_10080661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	898	Open in IMG/M
3300012955\|Ga0164298_10444504	Not Available	851	Open in IMG/M
3300012984\|Ga0164309_10137201	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300012985\|Ga0164308_10163275	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300012987\|Ga0164307_10206436	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300012988\|Ga0164306_10056881	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300013297\|Ga0157378_10261698	Not Available	1660	Open in IMG/M
3300013308\|Ga0157375_10157369	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300013315\|Ga0173609_10167242	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300014325\|Ga0163163_10391095	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300014326\|Ga0157380_10781371	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300014326\|Ga0157380_11263849	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300014326\|Ga0157380_11651525	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300014883\|Ga0180086_1136625	Not Available	637	Open in IMG/M
3300015371\|Ga0132258_12676803	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300017792\|Ga0163161_10024750	All Organisms → cellular organisms → Bacteria	4243	Open in IMG/M
3300017965\|Ga0190266_10140995	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300018059\|Ga0184615_10057761	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300018072\|Ga0184635_10120718	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300018429\|Ga0190272_10965512	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300018469\|Ga0190270_10329722	All Organisms → cellular organisms → Bacteria → Acidobacteria	1376	Open in IMG/M
3300018469\|Ga0190270_11950981	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300018476\|Ga0190274_10106362	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300019356\|Ga0173481_10303525	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300020583\|Ga0210401_11562298	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300025899\|Ga0207642_10064163	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300025904\|Ga0207647_10301730	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300025911\|Ga0207654_10744705	Not Available	706	Open in IMG/M
3300025923\|Ga0207681_11654854	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300025925\|Ga0207650_10222981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Micropruina → Micropruina glycogenica	1518	Open in IMG/M
3300025930\|Ga0207701_11591429	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300025934\|Ga0207686_10133491	Not Available	1706	Open in IMG/M
3300025941\|Ga0207711_10044594	All Organisms → cellular organisms → Bacteria	3786	Open in IMG/M
3300025986\|Ga0207658_10590249	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300026088\|Ga0207641_11195135	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300026095\|Ga0207676_11049323	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300026142\|Ga0207698_12419878	Not Available	536	Open in IMG/M
3300027029\|Ga0208731_1003180	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300027821\|Ga0209811_10144688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300027873\|Ga0209814_10059221	Not Available	1603	Open in IMG/M
3300027907\|Ga0207428_10701359	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027909\|Ga0209382_10439060	All Organisms → cellular organisms → Bacteria → Acidobacteria	1448	Open in IMG/M
3300027909\|Ga0209382_10776930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1022	Open in IMG/M
3300031228\|Ga0299914_10728239	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300031538\|Ga0310888_10014149	All Organisms → cellular organisms → Bacteria → Acidobacteria	3167	Open in IMG/M
3300031562\|Ga0310886_11111225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	510	Open in IMG/M
3300031740\|Ga0307468_100977074	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031834\|Ga0315290_10158567	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300031847\|Ga0310907_10280996	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300031908\|Ga0310900_10959884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	701	Open in IMG/M
3300031939\|Ga0308174_11049746	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300031941\|Ga0310912_11204006	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031997\|Ga0315278_12252568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300032174\|Ga0307470_10397639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	973	Open in IMG/M
3300032516\|Ga0315273_10458837	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300033416\|Ga0316622_100002815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12187	Open in IMG/M
3300033482\|Ga0316627_100270193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1372	Open in IMG/M
3300033550\|Ga0247829_11411158	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300034076\|Ga0373898_019524	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300034077\|Ga0373899_043163	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300034077\|Ga0373899_059212	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300034148\|Ga0364927_0056239	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	48.72%
Host-Associated	Host-Associated	47.01%
Engineered	Engineered	4.27%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	47.01%
Terrestrial	Environmental → Terrestrial	41.03%
Aquatic	Environmental → Aquatic	7.69%
Bioremediation	Engineered → Bioremediation	3.42%
Wastewater	Engineered → Wastewater	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.38%
Sediment	Environmental → Aquatic → Sediment	4.27%
Freshwater	Environmental → Aquatic → Freshwater	3.42%
Metal	Engineered → Bioremediation → Metal	3.42%
Roots	Host-Associated → Plants → Roots	2.56%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.26%
Loam	Environmental → Terrestrial → Soil → Loam	5.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.42%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	3.42%
Lake	Environmental → Aquatic → Freshwater → Lake	2.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.42%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	3.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.42%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	3.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034074	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.1	Engineered	Open in IMG/M
3300034076	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.2	Engineered	Open in IMG/M
3300034077	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.3	Engineered	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1017291073	3300000956	Soil	MHDDDLMDGLLKDALAAGVPQLPADFDARVMRRVRRRQLTPGGRVVMAVYGVTAAVAAVWLMRDLPAGAIVVALLIGVTVACGASAYGRRVALGK*
Ga0062593_1001504422	3300004114	Soil	MHDDEMMDALLRNAMTADAPRLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVVAVAATLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVGR*
Ga0062589_1008381551	3300004156	Soil	MHGLPSEGSMHDDEMMDALLRNAMTADAPRLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVVAVATTLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVVR*
Ga0063356_1007671112	3300004463	Arabidopsis Thaliana Rhizosphere	MHDDDMMDRVLKDALTAEAPQLSPEFDARVMRSVQPRRLTPIGRLVLAIYIVVAVATAVWLMRDLRVEAIVAAVVIGVPLAAGASAYGRRLALDR*
Ga0063356_1015168781	3300004463	Arabidopsis Thaliana Rhizosphere	MHDDELMERLLRDAMTADTPHLSPGFDAHVLRRVRPRRLTSIGRAVIAAYAVVAVTATVWLMRDLQTTWIVAAVAIGTPVAAAASIYGRR
Ga0063356_1019119312	3300004463	Arabidopsis Thaliana Rhizosphere	MPDDDLMDQLLKDAMAADVPQLSPAFDAGVMRRIRPRRLTPLGRVVIAVYIVIAAGTAVWLMRDLRLEWIAAAVAIGVPVVVGASAYARRLVPGH*
Ga0062594_1004700593	3300005093	Soil	MHDDNLMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRRITVSD*
Ga0065715_104559831	3300005293	Miscanthus Rhizosphere	MHDDNLMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRRITV
Ga0070666_101333772	3300005335	Switchgrass Rhizosphere	MHDDHLMDQLLRDTMAAPSPQLSPAFDARVMRRVRPRRLTPTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0070682_1001279192	3300005337	Corn Rhizosphere	MHDDHLMDQLLRDTMAAPSPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGQ*
Ga0068868_1011431102	3300005338	Miscanthus Rhizosphere	MHDDHLMDQLLRDTMAAPSPQLSPAFDARVMRRVRPRRLTPTGRWLIAAYVVVAGATAAWLMRDVPVTAVVAALAMTVPIALGVSAYGRRIALGD*
Ga0070691_104067012	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MHGLPSEGSMHDDELMDQLLRDAMTAEVPQLSAGFDARVLRRVRPRRLTPAGRVVIAAYILIAAAATLWLMRDLQVTWIVAAAAIGTPVAAVASVYGRRLAAGG*
Ga0070668_1006306482	3300005347	Switchgrass Rhizosphere	MHDDNLMDQLLRDTMAAKPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRRITVGD*
Ga0070669_1002132391	3300005353	Switchgrass Rhizosphere	MHDDNLMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALG
Ga0070671_1009725402	3300005355	Switchgrass Rhizosphere	MQPDEAMDHLLRDAMAAEQPQLSPAFDDRVLRRVRPRRLTSFGRGVMWAYTAATAAAAAWLLHDLPMTAIVAA
Ga0070674_1005974331	3300005356	Miscanthus Rhizosphere	TAEVPQLSAGFDARVLRRVRPRRLTPAGRVVIAAYILIAAAATLWLMRDLQVTWIVAAVAIGTPVAAVASVYGRRLAAGR*
Ga0070688_1005859061	3300005365	Switchgrass Rhizosphere	LMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRRITVGD*
Ga0070667_1004979272	3300005367	Switchgrass Rhizosphere	MHDDDLMDQLLRDTMAARPPQLSPEFDARVMRRVRPRRLTPAGRWLIAGYVVVASAAAAWLMRDVPVSAIVAALAISVPIAVGVGAYGRRIALGD*
Ga0070667_1021935872	3300005367	Switchgrass Rhizosphere	MQPDEAMDHLLRDAMAAEQPQLSPAFDDRVLRRVRPRRLTSFGRGVMWAYTAATAAAAAWLLHDLPMTAIV
Ga0068867_1001646082	3300005459	Miscanthus Rhizosphere	MHDDNLMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRRITVGD*
Ga0070685_100485995	3300005466	Switchgrass Rhizosphere	MHDDHLMDQLLRDTMAAPPPQLSPAFDARVMRRVRPRRLTPTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0070672_1012050002	3300005543	Miscanthus Rhizosphere	MHDDHLMDQLLRDTMAAPSPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0068854_1016068991	3300005578	Corn Rhizosphere	PPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRRITVGD*
Ga0068852_1004086152	3300005616	Corn Rhizosphere	VMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0068864_1006375822	3300005618	Switchgrass Rhizosphere	MHDDHLMDQLLRDTMAAPTPQLSPAFDARVMRRVRPRRLTPTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0066905_1022391072	3300005713	Tropical Forest Soil	MHDDEMMDGLLRDAMTAEAPRLSPGFDARVLRRVRPRRLTSIGRAALAAYVVVAVAATVWLMRDVQTTWIVAAVAIGTPVAVAASIYGRRLAVGR*
Ga0066903_1044364421	3300005764	Tropical Forest Soil	MLDDDVMDQLLKDAMAADAPELSPAFDARVMRRVRPRRLTPMGRVVITVYFVVAAAAAAWLMRDLPLTWIVAAAVIGA
Ga0066652_1004782112	3300006046	Soil	MHDDEMMERLLRDAMTAETPHLSPGFDARVLRRVRPRHLTSVGRAVIAAYVVVAVAATVWLMRDLQPTWIVAAVAIGTPLAAAASIYGRRLAVGR*
Ga0075417_101128152	3300006049	Populus Rhizosphere	MHDDEVMDQLLRDVMSADAPQLSPAFDARVMRRVRPRRLTPIGRILIAVYIVVAAFTAAWLMRDLPMEWIVAAVVISVPVAAGASAYGRRLSATH*
Ga0082029_14463544	3300006169	Termite Nest	MHDDEGMERLLRAVMAADAPQPSHGFDARVMRRVRPRGLTSMGRVVIAVYIVLAAATVAWLMRDLPVEWIVVAGAIGVPAAVGASAYGRRLAIDH*
Ga0068871_1003240402	3300006358	Miscanthus Rhizosphere	MRDDDLMDQLLRDTMAAEPPTLSPEFDARVMRRVRPRRLTQTGRWLIAGYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0068871_1022118082	3300006358	Miscanthus Rhizosphere	FDARVMRRVRPRRLTQTGRWLIAGYVVVAAAAAAWLMRDVPVSAIVAALVISVPIAVGVSAYGRRIALGD*
Ga0075428_1000958305	3300006844	Populus Rhizosphere	MHDDEAMDQLLRDVMSADAPQLSPAFDARVMRRVRPRRLTPIGRILIAVYIVVAAFTAAWLMRDLPMEWIVAAVVISVPVAAGASAYGRRLSATH*
Ga0075428_1017632192	3300006844	Populus Rhizosphere	MHDDEMMDRLLRDAMTADAPQLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVIAVATTVWLMRDVETTWIVAAVAIGAPVAAAASVYGRRLAVGR*
Ga0075421_1000543817	3300006845	Populus Rhizosphere	MHDDEVMDQLLRDVMSADAPQLSPAFDARVMRRVRPRRLTPIGRILIAVYIVVAAFTAAWLMRDLPMEWIVAAVVISVPVAAGASAYGRRL*
Ga0075421_1006157302	3300006845	Populus Rhizosphere	MDADAVMDQLLRDAMAADAPQLSPAFDARVMRRVRPYRLTPMGRVVIAVYIVVAAATAAWLMRDLRLEWIAAAIAISVPVAAGASAYGRRLALGH*
Ga0102851_109785501	3300009091	Freshwater Wetlands	MHDDDVMDRILRDAMAADAPRLSPAFDARVMQRVRPRRLTPMGRVVIGVYLVAAAAAAAWLMRDLRPEWVGAALVIGAPIAAGTSAYVRRIAMTR*
Ga0111539_102665402	3300009094	Populus Rhizosphere	MHDDEMMDALLRNAMTADAPRLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVVAVATTLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVGR*
Ga0075418_125649852	3300009100	Populus Rhizosphere	MHDDDVMDRLLKDAMAADAPQLSPDFDAQVRQAVRPRRLTPMGRVVIAAYALVAAATAVWLMQDLPVESIAAAIAISVPVAA
Ga0111538_104370562	3300009156	Populus Rhizosphere	HDDELMERLLRDAMTADTPHLSPGFDARVLRRVRPRRLTSIGRAVIAAYVVVAVAATLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVGR*
Ga0105241_102700302	3300009174	Corn Rhizosphere	MHDDDLMDQLLRDTMAARPPQLSPEFDARVMRRVRPRRLTQTGRWLIAGYVVVAAAAAAWLMRDVPVSAIVAALVISVPIAVGVSAYGRRIALGD*
Ga0105249_126355221	3300009553	Switchgrass Rhizosphere	MHDDHLMDQLLRDTMAAPSPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRGVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0126377_1000063911	3300010362	Tropical Forest Soil	MHDDEVMDRLLRDAMATDAPQLSPAFDTRVMRGVRPRRLTAMGRVVIAVYIVVAAATAVRLMRDLRMESIAAAVAIGLPVAAGVSVYGRRLTVGR*
Ga0134124_120320082	3300010397	Terrestrial Soil	RDTMAAPPPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0134122_100001135	3300010400	Terrestrial Soil	MQDDEAMDQLLKTAFAAEAPRLSPAFDARVLRRVRPRHLAPLGRLVIAIYVVIAAAGAVWLMRDLPLESIALAATIGLPVAAGVGAYGRRLAVDG*
Ga0134122_108342142	3300010400	Terrestrial Soil	MHDDEMMDRLLRDTMAADAPQLSPGFDARVRRRVRPRRLTPVGRAVIGLYIVAAVSMAVWLMRDVPMLSIVAAAAIGLPIAIGASAYGRHIAVGR*
Ga0134122_129184301	3300010400	Terrestrial Soil	AMLRDAMTADAPRLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVVAVAATLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVGR*
Ga0134123_130057322	3300010403	Terrestrial Soil	MHDDDGIDRLLRDAMAADVPQLSPAFDARVMRRVRPRRLTRLGRVAIAVYIVVAAAMAVWLMRDLPAESIVAAVVIGVPVAAGASAYGRRLAVGR*
Ga0137455_10810282	3300011429	Soil	MHDDDVMDKLLRDAMTADAPQLSPGFDARVMQRARPRRLTPMGRAVIAVYIVVATATAVWLMRDLRTEWIAAALVIGVPVAAAASAYGRRLILGVR*
Ga0137427_100972463	3300011445	Soil	MHDDDVMDQLLRDAMAADAPQLSSAFDARVMRRVRPRRLTPMGRVVIAVYIVVAAATAVWLMRDLRMESIAAAASAYVRRLAVSH*
Ga0150985_1120681521	3300012212	Avena Fatua Rhizosphere	ERLDQLLRDAMAAAAPQLSPAFDARVMQRVRPHRLTLVGRMVIAVYTAVAAGMVVWLMRDLHMVSIAAAVGIGVPVAAAVSSYGRRLLR*
Ga0150985_1197211774	3300012212	Avena Fatua Rhizosphere	MHDDDLMDRLLRDAMASEPPQLSPGFDARVLRRVRARRLTQSGRWLIAAYAVVACVVTAWLMRDLPVTAIVAALVISVPIAAGTRAYGRRITMAD*
Ga0150984_1139411181	3300012469	Avena Fatua Rhizosphere	DARVLRRVRARRLTQSGRWLIAAYAVVACVVTAWLMRDLPVTAIVAALVISVPIAAGTRAYGRRITMAD*
Ga0137397_112730572	3300012685	Vadose Zone Soil	MHDDDVMDRLLRDVMAADAPQLSPAFDARVMQRVRPRRLTPMGRVMLAVYIVVAAATAVWLMRDLPVESIVAAVAIGVPVAAAASAYGRHLAVVQ*
Ga0157306_100806611	3300012912	Soil	CMHGLPSEGSMHDDELMDQLLRDALTAEVPQLSPGFDARVLRRVRPRRLTPAGRVVIALYIVIAAAATLWLMRDLQVTWIVAAVAIGTPVAAAASVYGRRLAGRR*
Ga0164298_104445041	3300012955	Soil	AAPSPQLSPAFDARVMRRVRPRRLTPTGRWLIAAYVVVTVATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0164309_101372012	3300012984	Soil	MHDDHLMDQLLRDTMAAPPPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0164308_101632752	3300012985	Soil	MHDDDLMDQLLRDTMAAQPPRLSPEFDARVMRRVRPRRLTQAGRWLIAGYVVVASAAAAWLMRDVPVSAIVAALAISVPIAVGVGAYGRRIALGD*
Ga0164307_102064362	3300012987	Soil	MHDDHLMDQLLRDTMAAPTPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVTAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0164306_100568811	3300012988	Soil	MHDDDLMDQLLRDTMAARPPQLSPEFDARVMRRVRPRRLTQTGRWLIASYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0157378_102616982	3300013297	Miscanthus Rhizosphere	PSEGSMHDDDLMDQLLRDTMAGEPPKLSPEFDARVMRRVRPRRLTQRGRWLIAGYVVVAATTAGWLMRDVPVTAMVAALAMTVPIALGASAYGRRITLGD*
Ga0157375_101573692	3300013308	Miscanthus Rhizosphere	MHDDHLMDQLLRDTMAAPTPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0173609_101672422	3300013315	Sediment	MNADDAMERLLRDAMGAEIPQLSPAFDDRVMRRVRPRRLTTTGRVVMAVYSVVAAAAAVWLVHDLPMTLTFAAVAAGVPVAVGANAYVRRFAAGG*
Ga0163163_103910952	3300014325	Switchgrass Rhizosphere	MHDDHLMDQLLRDTMAAPTPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYAVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0157380_107813712	3300014326	Switchgrass Rhizosphere	MHDDDVMDHLLRDAMAADVPQLSPAFDARVMRAVRPRRLTPMGRVVIGAYILAAAVTTTWLMKDLPVELVGAALAISVPIAAGVGAYGRRLATGD*
Ga0157380_112638492	3300014326	Switchgrass Rhizosphere	MHDDELMDQLLRDAMTAEVPQLSAGFDARVLRRVRPRRLTPAGRVVIAAYILIAAAATLWLMRDLQVTWIVAAVAIGTPVAAVASVYGRRLAAGR*
Ga0157380_116515252	3300014326	Switchgrass Rhizosphere	MHDDDAMDRLLRDALAAEAPQLSPAFDARVMRGVRLRRLTPVGRVVIGVYAVVATSTEAWLMRDLDLKWIVAAMAISALVAAGASAYGRRLAVGP*
Ga0180086_11366252	3300014883	Soil	MHDDDVMDRLLRDVMAADAPQLSPAFDARVMRRVRPRRLTPMGRVVIAVYVVVAAATAVWLMRDLPMESIVAAVAIGGPVAAGASAYGRRLAVGH*
Ga0132258_126768032	3300015371	Arabidopsis Rhizosphere	RDTMAAPSPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD*
Ga0163161_100247502	3300017792	Switchgrass Rhizosphere	MHDDHLMDQLLRDTMAAPPPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD
Ga0190266_101409953	3300017965	Soil	MHDDHVMDQLLRDAMAADVPQLSPAFDTQVMRSVRPRRLTPMGRVVIAVYIVVAAGTAVWLMRDLRMELIAAALAVGVPVAAAASVYGRRLIVGH
Ga0184615_100577612	3300018059	Groundwater Sediment	MHDDELMDKLLRDVMAADTPELSPAFDIRVMRRTRTRRLTSIGRVAMAVYIVAAAATTVWLMRDLRVELIATALAIGGPVAAGARAYGRRFLVGH
Ga0184635_101207182	3300018072	Groundwater Sediment	MHDDELMDQLLRDAMTAEVPQLSAGFDARVLRRVRPRRLTPAGRVVIAAYILIAAAATLWLMRDLQVTWIVAAVAIGTPVAAVASVYGRRLAAGR
Ga0190272_109655122	3300018429	Soil	MHDDEVMDRLLRDAMAADAPQLSPAFDARVMRRVRPRRLTPMGRVVIAVYIVVAAATAVWLMRDLPMMSIVAALVIGVPVAAGARAYGRRLAVGH
Ga0190270_103297222	3300018469	Soil	MHDDDVMDRLLRDVMAAEAPQLSPGFDARVMRRVWPRRLAPMGRVVIAVYVVAAAATAVRLMQDLPMESVVAAVMIGVPVAVAASAYGRRLAAGH
Ga0190270_119509811	3300018469	Soil	MHDDEMMDGLLRDAMAADVPQLSPAFDARVLRRVQPRRLTTMGRLVIAAYIVAAAATTLWLLRDLPTTSIVAAVVIGVPVAVGMGAYGRRLAVG
Ga0190274_101063622	3300018476	Soil	MNDDELMDQLLRDAMPAEVPQLSAGFDARVLRRVRPRRLTPAGRVVIAVYIVIAAAATLWLMRDLQVTWIVAAVAIGTPVAAAASVYGRRLAAGR
Ga0173481_103035252	3300019356	Soil	MHDDELMDQLLRDALTAEVPQLSPGFDARVLRRVRPRRLTPAGRVVIALYIVIAAAATLWLMRDLQVTWIVAAVAIGTPVAAAASVY
Ga0210401_115622982	3300020583	Soil	MPDDDVMDRLLSDVMAADAPQLSPAFDARVMRRVRPRRATPMGRLVIAIYVVVAAATTLWLMRDLPMESIIAAVVIGVPIAAGASVYGRRLAVGH
Ga0207642_100641633	3300025899	Miscanthus Rhizosphere	MHDDHLMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRRITVGD
Ga0207647_103017302	3300025904	Corn Rhizosphere	MHDDNLMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRRITVGD
Ga0207654_107447052	3300025911	Corn Rhizosphere	MHDDDLMDQLLRDTMAARPPQLSPEFDARVMRRVRPRRLTQTGRWLIAGYVVVAAAAAAWLMRDVPVSAIVAALVISVPIAVGVSAYGRRIALGD
Ga0207681_116548542	3300025923	Switchgrass Rhizosphere	MHDDNLMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAY
Ga0207650_102229813	3300025925	Switchgrass Rhizosphere	MHDDNLMDQLLRDTMAAQPPQLSPGFDARVMRRVRPRRLTQTGRWLLAGYIVVAGATAAWLMREVPATAIVAALVMTVPIALGASAYGRPRWRSTSAAASG
Ga0207701_115914292	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MHDDDVMDHLLRDAMAADVPQLSPAFDARVMRAVRPRRLTPMGRVVIGAYILAAAVTTTWLMKDLPVELVGAALAISVPIAAGVGAYGRRLATGD
Ga0207686_101334912	3300025934	Miscanthus Rhizosphere	MHDDHLMDQLLRDTMAAPSPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD
Ga0207711_100445947	3300025941	Switchgrass Rhizosphere	MHDDDLMDQLLRDTMAARPPQLSPEFDARVMRRVRPRRLTPAGRWLIAGYVVVASAAAAWLMRDVPVSAIVAALAISVPIAVSVGAYGRRIALGD
Ga0207658_105902492	3300025986	Switchgrass Rhizosphere	MHDDDLMDQLLRDTMAARPPQLSPEFDARVMRRVRPRRLTPAGRWLIAGYVVVASAAAAWLMRDVPVSAIVAALAISVPIAVGVGAYGRRIALGD
Ga0207641_111951351	3300026088	Switchgrass Rhizosphere	MHDDHLMDQLLRDTMAAPPPQLSPAFDARVMRRVRPRRLTPTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMT
Ga0207676_110493232	3300026095	Switchgrass Rhizosphere	MHDDHLMDQLLRDTMAAPTPQLSPAFDARVMRRVRPRRLTPTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD
Ga0207698_124198782	3300026142	Corn Rhizosphere	SMHDDHLMDQLLRDTMAAPPPQLSPAFDARVMRRVRPRRLTQTGRWLIAAYVVVAGATAAWLMRDVPVSAIVAALVMTVPIAVGVSAYGRRITLGD
Ga0208731_10031804	3300027029	Forest Soil	MHDDEAMDRLLRGAMAADAPRLSAGFDTRVMRRVRPRRLTPMGRVVIAAYVVVAAVTAVWLMRDLRLESIVAAAVIGVPVAAGASAYGRRLATGH
Ga0209811_101446881	3300027821	Surface Soil	MRDDELIDPLLQDAMTADAPQLSSGFDARVMRAVRPRRLTPIGRAVIAIYVVMAAVTTLWLMRDLQATTIAVAVAIGVPVAVGAGVYGRRVAFGG
Ga0209814_100592213	3300027873	Populus Rhizosphere	MHDDEVMDQLLRDVMSADAPQLSPAFDARVMRRVRPRRLTPIGRILIAVYIVVAAFTAAWLMRDLPMEWIVAAVVISVPVAAGASAYGRRLSATH
Ga0207428_107013592	3300027907	Populus Rhizosphere	MHDDEMMDALLRNAMTADAPRLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVVAVAATLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVGR
Ga0209382_104390602	3300027909	Populus Rhizosphere	MDADAVMDQLLRDAMAADAPQLSPAFDARVMRRVRPYRLTPMGRVVIAVYIVVAAATAAWLMRDLRLEWIAAAIAISVPVAAGASAYGRRLALGH
Ga0209382_107769303	3300027909	Populus Rhizosphere	MHDDEVMDQLLRDVMSADAPQLSPAFDARVMRRVRPRRLTPIGRILIAVYIVVAAFTAAWLMRDLPMEWIVAAVVISVPVAAGASAYGRRL
Ga0299914_107282391	3300031228	Soil	MHDDEVMDRLLRDVMAADAPQLSPAFDARVMRRLRPRRLTAIGRVVMAVYIVVAAATAVWLIRDLPVAWVVAAALVGMPVGVAARAYGQRLAFGHSPDRRRAGARRRGSRPGNKR
Ga0310888_100141495	3300031538	Soil	MHDDEMMDALLRNAMTADAPRLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVVAVATTLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVGR
Ga0310886_111112252	3300031562	Soil	TADAPRLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVVAVAATLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVGR
Ga0307468_1009770741	3300031740	Hardwood Forest Soil	MHDDELMERLLRDAMTADTPQLSPGFDACVLRRVRPRRLTSIGRAVIAAYVVVAVAATVWLMRDLQTTWIVAAVAIGTPVAAAASI
Ga0315290_101585672	3300031834	Sediment	MHDDDVMDRTLDVMDRILRDAMAADAPRLSPAFDARVMPRVRPRRLTPMGRVVIGVYLVAAVAAAAWLMRDLRPEWVAAALVIGAPIAAGTSAYVRRIAMAR
Ga0310907_102809962	3300031847	Soil	MHGLPSEGSMHDDEMMDALLRNAMTADAPRLSPGFDARVLRRVRPRRLTPIGRAVIAAYVVVAVAATLWLMRDVQTTWIVAAVAIGTPVAAAASIYGRRLAVGR
Ga0310900_109598842	3300031908	Soil	MHDDELMDQLLRDALTAEVPQLSPGFDARVLRRVRPRRLTPAGRVVIALYIVIAAAATLWLMRDLQVTWIVAAVAIGTPVAAAASVYGRRLAGRR
Ga0308174_110497462	3300031939	Soil	MHDDDLMDRLLRDAMASEPPQLSPGFDARVLRRVRARRLTQSGRWLIAAYAVVACVVTAWLMRDLPVTAIVAALVISVPIAAGTRAYGRRITMAD
Ga0310912_112040062	3300031941	Soil	MRDDELMDRLLRDTLAAAPPQLSPQFDDRLMRRVRPRRLSQKGRVLVTAYAVLGASTAAWLMHDLPLTMIVAALVITVPIALGVSAYGRRITA
Ga0315278_122525682	3300031997	Sediment	MHDDDVMDRTLDVMDRILRDAMAADAPRLSPAFDARVMPRVRPRRLTPMGRVVIGVYLVAAVAAAAWLMRDLRPEWVAAAL
Ga0307470_103976392	3300032174	Hardwood Forest Soil	MHDDELMERLLRDAMTADTPQLSPGFDARVLRRVRPRRLTSIGRAVIAAYVVVAVAATVWLMRDLQTTWIVAAVAIGTPVAAAASIYGRRLAVGR
Ga0315273_104588372	3300032516	Sediment	MHDDDVMDRTLDVMDRILRDAMAADPPRLSAAFDARVMQRVRPRRLTPMGRVVIGVYLVAAVAAAAWLMRDLRPEWVAAALVIGAPIAAGTSAYVRRIAMAR
Ga0316622_1000028153	3300033416	Soil	MHDDDVMDRILRDAMAADAPRLSPAFDARVMQRVRPRRLTPMGRVVIGVYLVAAAAAAAWLMRDLRPEWVGAALVIGAPIAAGTSAYVRRIAMTR
Ga0316627_1002701931	3300033482	Soil	MHDDDVMDRILRDAMAADAPRLSPAFDARVMQRVRPRRLTPMGRVVIGVYLVAAAAAAAWLMRDLRPEWVGAALVIGA
Ga0247829_114111582	3300033550	Soil	MHDDDAMDRLLRDALAADAPQLSPAFDARVMRRARPRRLAPMGRMVLAVYVVAAAATAVRLMQDLPMESIAAAVVLGVPV
Ga0373894_053367_372_608	3300034074	Sediment Slurry	MNADDAMERLLRDAMGAEIPQLSPAFDDRVMRRVRPRRLTTTGRVVMAVYSVVAAAAAVWLVHDLPMNLTLAAVTIGVP
Ga0373898_019524_479_766	3300034076	Sediment Slurry	MNADDAMERLLRDAMGAEIPQLSPAFDDRVMRRVRPRRLTTTGRVVMAVYSVVAAAAAVWLVHDLPMNLTLAAVTIGVPVAAGANAYVRRFAAGG
Ga0373899_043163_26_313	3300034077	Sediment Slurry	MNADDAMERLLRDAMGAEIPQLSPAFDGRVMRRVRPRRLTTTGRVVMAVYSVVAAAALVWLVHDLPMNLTLAAVAIGVPVAAGAHAYVRRFAAGG
Ga0373899_059212_263_499	3300034077	Sediment Slurry	MHDDDVMDRLLRAAMAADAPQLSPAFDARVMQRVRPRRLTPTGRVVMALYAVVAAAAAVWLMGDLPMGSIVAAATIGVP
Ga0364927_0056239_181_468	3300034148	Sediment	MHDDDVIDQLLRDAMAADVPQLSSAFDIRVMRRVRPRRLTPMGRVVLGVYIVGAAATALWLMRDLRMEWMAAAVAIGVPVAASASAYVRRLAVSH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077749

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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