Metagenome / Metatranscriptome Family F077566

Basic Information
Family ID	F077566
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	55 residues
Representative Sequence	VDKLSRIAWLYIGAVIAAAVIVVARGPYTGLDWSQIGVLGLLLVACESSATL
Number of Associated Samples	102
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.15 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	94.02 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Most Common Taxonomy
Group	Bacteria (52.991 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.735 % of family members)
Environment Ontology (ENVO)	Unclassified (35.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.120 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.75% β-sheet: 0.00% Coil/Unstructured: 51.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13490	zf-HC2	47.01
PF08281	Sigma70_r4_2	27.35
PF00459	Inositol_P	0.85
PF01258	zf-dskA_traR	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	25.64 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.71 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.71 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.71 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10350475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	905	Open in IMG/M
3300002672\|Ga0005490J37275_105256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1314	Open in IMG/M
3300005518\|Ga0070699_101215769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	691	Open in IMG/M
3300005529\|Ga0070741_11087017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	681	Open in IMG/M
3300005541\|Ga0070733_10336557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1000	Open in IMG/M
3300005546\|Ga0070696_101399232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	596	Open in IMG/M
3300005610\|Ga0070763_10217759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1024	Open in IMG/M
3300005610\|Ga0070763_10526669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	678	Open in IMG/M
3300005921\|Ga0070766_10386866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	914	Open in IMG/M
3300006162\|Ga0075030_100933563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	684	Open in IMG/M
3300006175\|Ga0070712_102015745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	505	Open in IMG/M
3300006176\|Ga0070765_100471510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1178	Open in IMG/M
3300006755\|Ga0079222_10080439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1640	Open in IMG/M
3300006954\|Ga0079219_10549063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	827	Open in IMG/M
3300009792\|Ga0126374_10684400	Not Available	769	Open in IMG/M
3300010048\|Ga0126373_11003979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300010049\|Ga0123356_10001486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25826	Open in IMG/M
3300010049\|Ga0123356_11843527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	752	Open in IMG/M
3300010361\|Ga0126378_11901155	Not Available	677	Open in IMG/M
3300010366\|Ga0126379_11496936	Not Available	781	Open in IMG/M
3300010366\|Ga0126379_11721996	Not Available	731	Open in IMG/M
3300010366\|Ga0126379_11903845	Not Available	698	Open in IMG/M
3300010379\|Ga0136449_100971600	Not Available	1372	Open in IMG/M
3300010859\|Ga0126352_1162884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1407	Open in IMG/M
3300010865\|Ga0126346_1153922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1346	Open in IMG/M
3300010865\|Ga0126346_1181678	Not Available	562	Open in IMG/M
3300011120\|Ga0150983_12031573	Not Available	649	Open in IMG/M
3300012359\|Ga0137385_11331568	Not Available	581	Open in IMG/M
3300013102\|Ga0157371_10414768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300013105\|Ga0157369_10219086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1992	Open in IMG/M
3300014169\|Ga0181531_10618290	Not Available	672	Open in IMG/M
3300015241\|Ga0137418_11295230	Not Available	508	Open in IMG/M
3300016357\|Ga0182032_11463549	Not Available	592	Open in IMG/M
3300017821\|Ga0187812_1261416	Not Available	551	Open in IMG/M
3300017932\|Ga0187814_10388868	Not Available	542	Open in IMG/M
3300017959\|Ga0187779_10310033	Not Available	1012	Open in IMG/M
3300018001\|Ga0187815_10302800	Not Available	678	Open in IMG/M
3300018060\|Ga0187765_10904955	Not Available	597	Open in IMG/M
3300018060\|Ga0187765_11064041	Not Available	559	Open in IMG/M
3300019260\|Ga0181506_1206146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1312	Open in IMG/M
3300020078\|Ga0206352_10329419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300020579\|Ga0210407_10794161	Not Available	730	Open in IMG/M
3300020580\|Ga0210403_10393429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1132	Open in IMG/M
3300020581\|Ga0210399_10248492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1483	Open in IMG/M
3300020582\|Ga0210395_10006321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	8984	Open in IMG/M
3300020610\|Ga0154015_1408171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1501	Open in IMG/M
3300021402\|Ga0210385_10905122	Not Available	677	Open in IMG/M
3300021404\|Ga0210389_10256150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1369	Open in IMG/M
3300021404\|Ga0210389_11542774	Not Available	504	Open in IMG/M
3300021474\|Ga0210390_10146988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1984	Open in IMG/M
3300021478\|Ga0210402_11207459	Not Available	683	Open in IMG/M
3300021479\|Ga0210410_11244125	Not Available	636	Open in IMG/M
3300022499\|Ga0242641_1002190	Not Available	1340	Open in IMG/M
3300022505\|Ga0242647_1013174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300022506\|Ga0242648_1025899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300022508\|Ga0222728_1120456	Not Available	514	Open in IMG/M
3300022510\|Ga0242652_1027318	Not Available	642	Open in IMG/M
3300022510\|Ga0242652_1036490	Not Available	584	Open in IMG/M
3300022513\|Ga0242667_1003448	Not Available	1133	Open in IMG/M
3300022513\|Ga0242667_1015335	Not Available	751	Open in IMG/M
3300022523\|Ga0242663_1046229	Not Available	754	Open in IMG/M
3300022530\|Ga0242658_1014635	Not Available	1330	Open in IMG/M
3300022531\|Ga0242660_1016409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1347	Open in IMG/M
3300022531\|Ga0242660_1055037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300022532\|Ga0242655_10034572	Not Available	1174	Open in IMG/M
3300022533\|Ga0242662_10045362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300022708\|Ga0242670_1004694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1230	Open in IMG/M
3300022708\|Ga0242670_1009220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300022712\|Ga0242653_1013622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300022720\|Ga0242672_1129466	Not Available	524	Open in IMG/M
3300022722\|Ga0242657_1241448	Not Available	514	Open in IMG/M
3300022726\|Ga0242654_10050715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300022726\|Ga0242654_10081105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985	Open in IMG/M
3300025679\|Ga0207933_1069375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1181	Open in IMG/M
3300025906\|Ga0207699_11323411	Not Available	533	Open in IMG/M
3300027505\|Ga0209218_1040903	Not Available	921	Open in IMG/M
3300027692\|Ga0209530_1195397	Not Available	559	Open in IMG/M
3300028047\|Ga0209526_10880939	Not Available	546	Open in IMG/M
3300028879\|Ga0302229_10155826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1056	Open in IMG/M
3300029636\|Ga0222749_10085358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1459	Open in IMG/M
3300029701\|Ga0222748_1114164	Not Available	539	Open in IMG/M
3300029943\|Ga0311340_10178650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2173	Open in IMG/M
3300030580\|Ga0311355_10568444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1075	Open in IMG/M
3300030583\|Ga0210262_1229282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	535	Open in IMG/M
3300030612\|Ga0257196_1371992	Not Available	519	Open in IMG/M
3300030739\|Ga0302311_10670136	Not Available	689	Open in IMG/M
3300030739\|Ga0302311_10699821	Not Available	669	Open in IMG/M
3300030741\|Ga0265459_11294806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300030741\|Ga0265459_11433592	Not Available	781	Open in IMG/M
3300030743\|Ga0265461_10153950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1292	Open in IMG/M
3300030888\|Ga0265769_101539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1118	Open in IMG/M
3300030937\|Ga0138302_1172364	Not Available	541	Open in IMG/M
3300030962\|Ga0138297_1129123	Not Available	723	Open in IMG/M
3300030963\|Ga0265768_103669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300030981\|Ga0102770_11281550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1077	Open in IMG/M
3300031090\|Ga0265760_10300791	Not Available	568	Open in IMG/M
3300031234\|Ga0302325_10953114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300031236\|Ga0302324_101479912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	883	Open in IMG/M
3300031640\|Ga0318555_10182711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1128	Open in IMG/M
3300031708\|Ga0310686_103036639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300031708\|Ga0310686_109252425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300031718\|Ga0307474_10326552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1185	Open in IMG/M
3300031748\|Ga0318492_10040793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2131	Open in IMG/M
3300031751\|Ga0318494_10047598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2256	Open in IMG/M
3300031819\|Ga0318568_10790798	Not Available	588	Open in IMG/M
3300031880\|Ga0318544_10098584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1100	Open in IMG/M
3300031897\|Ga0318520_10077433	Not Available	1819	Open in IMG/M
3300031938\|Ga0308175_103055410	Not Available	520	Open in IMG/M
3300031959\|Ga0318530_10020503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2267	Open in IMG/M
3300032035\|Ga0310911_10559966	Not Available	663	Open in IMG/M
3300032041\|Ga0318549_10283027	Not Available	747	Open in IMG/M
3300032043\|Ga0318556_10281428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	869	Open in IMG/M
3300032072\|Ga0326631_117201	Not Available	522	Open in IMG/M
3300032261\|Ga0306920_101210901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300032896\|Ga0335075_10185265	Not Available	2521	Open in IMG/M
3300032954\|Ga0335083_11194876	Not Available	590	Open in IMG/M
3300033548\|Ga0316216_1012940	Not Available	659	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.87%
Host-Associated	Host-Associated	5.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.74%
Aquatic	Environmental → Aquatic	5.13%
Plants	Host-Associated → Plants	2.56%
Arthropoda	Host-Associated → Arthropoda	1.71%
Human	Host-Associated → Human	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.76%
Peat	Environmental → Terrestrial → Peat	5.98%
Freshwater	Environmental → Aquatic → Freshwater	4.27%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%
Sediment	Environmental → Aquatic → Sediment	0.85%
Digestive System	Host-Associated → Human → Digestive System	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.52%
Loam	Environmental → Terrestrial → Soil → Loam	11.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.27%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.56%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.85%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002672	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF139 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030583	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE023SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030612	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Tenderfoot Creek Experimental Forest, Montana, United States - TCEF2-1 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030962	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030981	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033548	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103504753	3300001593	Forest Soil	VGRLSRVAWLYIGIVVAAAVVMIAVGPFGGFDWVQVGALGLLLVACESSATLLNPRGLTWSANSIASLA
Ga0005490J37275_1052563	3300002672	Forest Soil	VGRLSRVAWLYIGIVVAAAVVMIAVGPFGGLDWVQVGALGLLLVACESS
Ga0070699_1012157691	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VGKLSRIAWLYIAAVIAAAVIAIAGGPFAGINWAQVVVLGLLVVACESIATVL
Ga0070741_110870171	3300005529	Surface Soil	VDRLSRIAWLYIGAVIAAAVIVLAKGPYTGLNWSEIAVLGLLLVACESSATLLNAR
Ga0070733_103365571	3300005541	Surface Soil	VSKFSRIAWLYIGAVVASAAIVLAAGSYRGLDWTQVGVLG
Ga0070696_1013992321	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VDRLSRIAWLYIGAAVAAAVIVVVKGPYAGLDWSQIGVLGLLLVACESSATLLNARNLAWSANTMA
Ga0070763_102177591	3300005610	Soil	VRKLSRIAWLYIGAVVAAAVIVLAAGPDTGLDWAQIGVLSLL
Ga0070763_105266691	3300005610	Soil	VGRLSRVAWLYIGIVVAAAVVMIAVGPFEGLDWVQVGALGLLLVACESSATLLNPRGLA
Ga0070766_103868663	3300005921	Soil	VGRLSRVAGLYIGIVVAAAVVMIAVGPFGGLDWVQVGALGLLLVACESSATLLNPRGLAWSANSIAS
Ga0075030_1009335632	3300006162	Watersheds	VGKLSRIAWLYIGAVIAAAAIAIARGPFAGIQWSVVAALGLLLVACESSATLL
Ga0070712_1020157451	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VGKLSRIAWLYIGAVIAAAVVAIARGPFAGIDWAQVVVLGLLVVACESIAT
Ga0070765_1004715103	3300006176	Soil	VDKLSRIAWLYIGAVIAAAVIVLAKGPYAGLNWSQIAVLGLLLVACESSATLLNPRGLAWSANSIASLA
Ga0079222_100804394	3300006755	Agricultural Soil	VDKLSRIAWLYIGAAVAAAVIVVVKGPYAGLDWGQIGVLGLLLVACES
Ga0079219_105490633	3300006954	Agricultural Soil	VGKLSRIALLYIGAVIVAAVIVLAAGPYRGLDWTQIGVLGILLIACESAATLLNGRGLAWSAN
Ga0126374_106844002	3300009792	Tropical Forest Soil	VGKLSRIAWLYVGAVIIAAVVVVARGPFTGIRWDQVAVLGLLL
Ga0126373_110039793	3300010048	Tropical Forest Soil	VGKLSRIAWLYVGAVVAIAAVAIARGPFSGIQWNQVAVLGLLLAACESSATLL
Ga0123356_1000148628	3300010049	Termite Gut	VGKLSRTAWLYIGLVVALAAAVVAYGPYHDVPWGEVVPLGLLLIACESSATLLNPRGLAWSANTMAS
Ga0123356_118435271	3300010049	Termite Gut	VGKLSCIAWLYVGSVVVAAGVVVAYGPYHDVPWGEVVPLGLLLIACESSATLLNPRGLAWSANTMASLAA
Ga0126378_119011551	3300010361	Tropical Forest Soil	VRKLSRIAWLYIGAVIAAAVIVLAAGPFTGLDWIQIGVLGLLLVACESSATLLNGRGLAWSANTMA
Ga0126379_114969363	3300010366	Tropical Forest Soil	VGKLSRIAWLYIGAVVATAAIAIARGPFSGIQWNQVAVLGLLLAA
Ga0126379_117219962	3300010366	Tropical Forest Soil	VGKLSRIAWLYIGAVVTVAAIAVARGPFYGIQWSQVAVLGLLLAACESSA
Ga0126379_119038451	3300010366	Tropical Forest Soil	VGKLSRIAWLYIGAVVAVAAIAVARGPFSGIQWSQVAVLGLLLAACESS
Ga0136449_1009716001	3300010379	Peatlands Soil	VGKISRLAWLYIGAVIVAAAIVVTAGPYAGLDWSQIAVLGLLLVA
Ga0126352_11628841	3300010859	Boreal Forest Soil	VDRLSRIAWLYIGAVIAAAVIVLARGPYTGLDWSQIAVLGLLLVACESSATLLNARGLAWSANTM
Ga0126346_11539221	3300010865	Boreal Forest Soil	VGKLSRIALLYIGAVVAAAAVVVAVGPFGGLEWSQVGVLGLLLVACESSAT
Ga0126346_11816782	3300010865	Boreal Forest Soil	VDKLSRIAWLYIGAAIAAAVIVIVKGPYTGLNWGQIGVLGLLLVACESSA
Ga0150983_120315732	3300011120	Forest Soil	VDKLSRIAWLYIGAVIAAAVIVLAKGPYAGLNWSQIAVLGLLLVACESSATLLNARGLAWSA
Ga0137385_113315681	3300012359	Vadose Zone Soil	VDKLSRIAWLYIGAVIAAAVIVVARGPFTGLNWGQIGVLGLLLVACESSATLLNARGLAWSANTMA
Ga0157371_104147681	3300013102	Corn Rhizosphere	VGKLSRIALLYIGAVIVAAVIVLAAGPYRGLDWTQIGVLGVLLVACESAATLLNGRGLAWSA
Ga0157369_102190864	3300013105	Corn Rhizosphere	VGKLSRIALLYVGAVIVAAGIVLAAGPYRGLDWTQIGVLGVLLVACESAATLLNGRGLAWSANTMASL
Ga0181531_106182902	3300014169	Bog	VSKLSSIAWLYIGAVIAAAAIVLAKGPYTGLDWSQIGVLALLLVACESSATLLN
Ga0137418_112952302	3300015241	Vadose Zone Soil	VDKLSRIAWLYIGAVIAAAVIVVARGPFTGLNWGQIGVLGLLLVASACA
Ga0182032_114635492	3300016357	Soil	VGKLSRIAWLYIGAVVAAAAIAIARGPFSGIQWSVVAALGLLLVAC
Ga0187812_12614161	3300017821	Freshwater Sediment	VSKFSRIAWLYIGAVVASAAIVLGAGTYRGLDWTQ
Ga0187814_103888681	3300017932	Freshwater Sediment	VGKLSRIAWIYISAVMAAAAIAIARGPFTGTQWAVVATLGLLLVACESTATLL
Ga0187779_103100331	3300017959	Tropical Peatland	LGKLSWLAGTYIGAVVAAAVACIAFGSYNGVDWSAVAILGLLLVACESTATLLRPRKVAW
Ga0187815_103028001	3300018001	Freshwater Sediment	VRKLSRIAWLYIGAVIAAAVIVLAAGPDTGLDWSQIGVLGLLLVACE
Ga0187765_109049551	3300018060	Tropical Peatland	VGKLSRIAWIYIGAVIAAAAIAVARGPFAHIGWDKVAALGLLLVACESTATLLRSRSL
Ga0187765_110640412	3300018060	Tropical Peatland	VDKLSRIAWLYIGAAIAGAVIVVAKGPFSGLDWGQIGVLGLLLVACESSATLLN
Ga0181506_12061463	3300019260	Peatland	VHKLSRIAWLYIGAVVAAAVIVLAAGPDTGLDWAQIGVLSLLLVACESS
Ga0206352_103294193	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VGKLSRIALLYIGAVIVAAVIVLAAGPYRGLDWTQIGVLGVLLVACESAATLLNG
Ga0210407_107941611	3300020579	Soil	VGKLSRIAWLYIGAAIAAAVVAIARGPFAGINWAQVVVLGLLVVACESIATVL
Ga0210403_103934291	3300020580	Soil	VDKLSRIAWLYIGAVIAAAVIVVVRGPYTGLDWSQIGVLGLLLVACESSATLLNARGLAWSANT
Ga0210399_102484923	3300020581	Soil	VDKLSRIAWLYIGAVIAAAVIVLAKGPYAGLNWSQIAVLGLLLVACESSATLLNARGLAWSANTMASL
Ga0210395_100063211	3300020582	Soil	VSKFSRIAWLYIGSVIAAAAVVVALGPFRGLDWAVVGALGLLLIACESS
Ga0154015_14081713	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	VGKLSRIALLYVGAVIVAAGIVLAAGPYRGLDWTQIGVLGVLLVACESAATLLNGRG
Ga0210385_109051222	3300021402	Soil	VGKLSPIAWLYIGAVIAAAAIVLCAGPYTGLDWAQIGVLGLLLVACESSATLLNGRGL
Ga0210389_102561503	3300021404	Soil	VDKLSRIAWLYIGAVIAAAVIVVAKGPYAGLNWSQIGVLGLLLVA
Ga0210389_115427741	3300021404	Soil	MEKLSRIAWLYIGAVIVAAVIVVAKGPYTGLNWGQIGALGLLLIACE
Ga0210390_101469881	3300021474	Soil	VDKLSRIAWLYIGAVIAAAVIVVAKGPYAGLDWSQIGVLGLLLVACE
Ga0210402_112074591	3300021478	Soil	VGKLSRIAWLYIGAVIAAAVVAIARGPFAGIDWAQVEVLGLLVVACESIATVLKSRSLA
Ga0210410_112441251	3300021479	Soil	VGKLSRIAWLYISAAIAAAVIVLVKGPYTGLDWSQIGVLGLLLVACESSATLLNARGLA
Ga0242641_10021903	3300022499	Soil	VRKLSRIAWLYIGAVVAAAVIVLAAGPDTGLNWSQIGVLGLLLVACESSATLLNG
Ga0242647_10131743	3300022505	Soil	VGRLSRVAWLYIGIVVAAAVAMIAAGPFGGLDWVQVGALGLLLVACESSATLVN
Ga0242648_10258991	3300022506	Soil	VRKLSRIAWLYIGGVVAAAVIVLAAGPFSGLDWGQIAVLGLLLVACESSATL
Ga0222728_11204561	3300022508	Soil	VGRLSRVAWLYIGLVIAAAVGMIAAGPFGGLDWVQVGALGLLLVACESSATL
Ga0242652_10273182	3300022510	Soil	VGRLSRVAWLYIGIVVAAAVVMIAVGPFGGLDWVRVGALGLLLVACESSATLLN
Ga0242652_10364901	3300022510	Soil	VRKLSRIAWLYIGAVVAAAVIVLAAGPDTGLNWSQIGVLGL
Ga0242667_10034481	3300022513	Soil	VGRLSRVAWLYIGLVVAAAVAMIAAGPFAGLDWVQVGALGLLLVACESSATLVNPRGLAWSANSIA
Ga0242667_10153353	3300022513	Soil	VRKLSRIAWLYIGAVVAAAVIVLAAGPDTGLDWSQIGVLGLLLVACESSATLVNGRGLAWSAN
Ga0242663_10462293	3300022523	Soil	VGRLSRVAWLYIGLVIAAAAAVIAVGPFGGLNWVQVGVLGLLLVACESSATVLNPRGLAW
Ga0242658_10146353	3300022530	Soil	VDKLSRIAWLYIGAVIAAAVIVVAKGPYAGLNWGQIGVLGLLLVACESS
Ga0242660_10164093	3300022531	Soil	VDKLSRIAWLYIGAVIAAAVIVLAKGPYTGLDWGQIGVLGLLLVACESSATL
Ga0242660_10550373	3300022531	Soil	VRKLSRIAWLYIGAVVAAAVIVLAAGPDTGLNWSQIGVLGLLLVACESSATLVNGRGLAWSAN
Ga0242655_100345723	3300022532	Soil	VGRLSRVAWLYIGLVIAAAVVTIALGPFGGLDWVQVGALGLLLVACESS
Ga0242662_100453623	3300022533	Soil	VRKLSRIAWLYIGAVVAAAVIVLAAGPDTGLDWAQIGVLGLLLVACESSATLVN
Ga0242670_10046941	3300022708	Soil	VGRLSRVAWLYIGLVVAAAVAMIAAGPFGGLDWVQVGALGLLLVACESSATLVNPRG
Ga0242670_10092203	3300022708	Soil	VGKLSRIAWLYIGAVITAAVVVIARGPFAGIDWAQVEVLGLLVVACESIATVLKSR
Ga0242653_10136221	3300022712	Soil	MGKLSPIARVYIGAVIAAAVIVLAAGPYTGLDWSQIGVLALLLVACESSATLLNARGLTWSANTMASLA
Ga0242672_11294662	3300022720	Soil	VRKLSRIAWLYIGAVVAAAVIVLAAGPDTGLNWSQIGVLGLLLVACESSATLVNGRG
Ga0242657_12414481	3300022722	Soil	VGKLSRGAWIYIGAVIAAAVFVVARGPFAGIQWDEVVALGLLLVACESTATLLNS
Ga0242654_100507153	3300022726	Soil	VGRLSRVAWLYIGLVIAAAAAIFAVGPFRGLDWVQVGALGLLLVACESSATVLNPRGLAW
Ga0242654_100811053	3300022726	Soil	VGKLSKAAWLYIGAVIIAAAVVVARGPFAGINWTAVITLGLLLAASESTA
Ga0207933_10693751	3300025679	Arctic Peat Soil	VGRLSRVAWLYIGLVIAAAVVMIAVGPFGGLDWVQVGALGLLLVACESSATLLNP
Ga0207699_113234111	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VRKLSRIAWLYIGAVVAAAVVVLAAGPDTGLDWAQIGVLGLLLV
Ga0209218_10409033	3300027505	Forest Soil	VGRLSRVAWLYIGIVVAAAVVMIAVGPFGGLDWVQVGALGLLLVACESSATLLNPRGLAW
Ga0209530_11953972	3300027692	Forest Soil	VGKLSRVAWLYIGVIVAAAVAVVAIGPFGGLDWVQVGALGLLLVACESTATLLNSRG
Ga0209526_108809391	3300028047	Forest Soil	VGRLSRVAWLYIGLVIAAAVVMIAVGPFGGLDWVQVGALGLLLVACES
Ga0302229_101558261	3300028879	Palsa	VGRLSRVAWLYIGIVVAAAVVMIAVGPFGGLDWVQVGALGLLLVACESSATLLNPRGLS
Ga0222749_100853581	3300029636	Soil	VRKLSRIAWLYIGAVVAAAVIVLAAGPDTGLNWSQLGVLGLLLVACESSATLVNGRGLA
Ga0222748_11141641	3300029701	Soil	VGKLSRIAWLYIGAVVAAAVVVIARGPFAGIDWAQVVVLGLLVVACESI
Ga0311340_101786501	3300029943	Palsa	VGKLSRIALLYIGAVVAAAIVVVAVGPFDGLDWSEVGVLGLLLVACESSATYLN
Ga0311355_105684443	3300030580	Palsa	VGRLSRVAWLYIGIVVAAAVVMIAVGPFGGLDWVQVGALGLLLVACESSATRLNPRGLAWSANSIA
Ga0210262_12292822	3300030583	Soil	VGRLSRVAWLYIGIVVAAAVVMIAVGPFGLDWVQVGALGLLLVACESSATLVNPRGLAWS
Ga0257196_13719921	3300030612	Host-Associated	VGKLSRIALLYIGAVVAAAVAVIATGSFGGLDWSQVGVLGLLLVACESSATSVNS
Ga0302311_106701361	3300030739	Palsa	VDRLSRIAWLYIGAVIAAAVIVIAAGPFTMLHWKQVLALGLLLV
Ga0302311_106998212	3300030739	Palsa	VGRLSRVAWLYIGIVVAVAVAVIAAGPFGGLDWVQVGALGLLLVACESS
Ga0265459_112948063	3300030741	Soil	VGRLSRVAWLYIGLVTAAAAVMIALGPFGGLDWVQVGALGLLLVACESSATLLNPRGLAWSANSIASL
Ga0265459_114335922	3300030741	Soil	VERLSRIALPYIGAVIIAAVIVVAAGPFTSLNWTQIGTLGLLLVACESSATRLTSGGLAW
Ga0265461_101539501	3300030743	Soil	VGRLSRVAWLYIGLVIAAAVVMIAVGPFGGLDWVQVGSLGLLLVACESSATLLNPRGLAW
Ga0265769_1015393	3300030888	Soil	VGKLSRIAWLYIGAVIAAAVVVIARGPFAGIDWAQVEVLGLLVVACESIATVLKSRSL
Ga0138302_11723642	3300030937	Soil	VGKLSRIAWLYIGAVVAAAVVVIARGPFAGIDWAQVEVLGLLVVA
Ga0138297_11291231	3300030962	Soil	VGRLSRVTWLYIGLVIAAAVGMIAAGPFGGLDWVQIGELGLLLVACESFATLLNPRGLTWSAEEGKKNRGRGKKR
Ga0265768_1036693	3300030963	Soil	VGRLSRVAWLYIGIVVAAAVVMIAVGPFGGLDWVQVGALGLLLVACESSATLLNPRG
Ga0102770_112815501	3300030981	Soil	VDKLSRIAWLYIGAVIAAAVIVVAKGPYAGLNWSQIGVLGLLLVACESSATLLNARGLAWSANTMASL
Ga0265760_103007912	3300031090	Soil	VGRLSRVAWLYIGLVIAAAVVMIAVGPFGGLDWVQVGALGLLLVACESS
Ga0302325_109531141	3300031234	Palsa	MGKLSRIGWLYIGAVIAAAVIVLAAGSYSALNWSQIGILGLLLIACESS
Ga0302324_1014799123	3300031236	Palsa	VGRLSRVAWLYIGIVVAVAVAVIAAGPFGGLDWVQVGALGLLLVACESSATLLNSRGL
Ga0318555_101827113	3300031640	Soil	VGKLSRIAWLYIGAVVAIAAIAIARGPFSGIQWSQVAVLGLLLAACESSATL
Ga0310686_1030366393	3300031708	Soil	VGKLSRIALLYIGAVVAAAIVVVAVGPFDGLDWSEVGVLGLLLVACESSA
Ga0310686_1092524253	3300031708	Soil	VDKLSRIAWLYIGAVIAAAVIVVARGPYTGLDWSQIGVLGLLLVACESSATL
Ga0307474_103265521	3300031718	Hardwood Forest Soil	VAKLSRIAWLYIGAVMIAAVIVLTAGPYRGLDWTQIGVLGVLLIACESAATLLNGRGL
Ga0318492_100407931	3300031748	Soil	VGKLSRIAWLYIGAVIAAAAIAIARGPFTGIQWDIVVALGLLLVACE
Ga0318494_100475981	3300031751	Soil	VGKLSRIAWLYIGAVIGAAAIAIARGPFTGIQWDIVVALGLLLVACES
Ga0318568_107907981	3300031819	Soil	VGKLSRIAWLYIGAVVAIAAIAIARGPFSGIQWSQVAVLGLL
Ga0318544_100985843	3300031880	Soil	VGKLPRIAWLYIGAVVTVAAIAVARGPFSGIQWSQVAVLGLLLAACESSATLLN
Ga0318520_100774331	3300031897	Soil	VGKIPRIAWLYIGAVVTVAAIAVARGPFSGIQWSQVAVLGLLLAACESS
Ga0308175_1030554102	3300031938	Soil	VGKLSRIALLYIGAVIVAAVIVLAAGPYRGLDWTQIGVLGVLLIACESAATLLNGRGLAWSANTMALLAA
Ga0318530_100205034	3300031959	Soil	VGKLSRIAWLYIGAVIAAAAIAIARGPFTGIQWDIVVALGLLLVACESSATLLNSRSL
Ga0310911_105599661	3300032035	Soil	VGKIPRIAWLYIGAVVTVAAIAVAQGPFSGIQWSQVAVLGLLLAACESSATLLNSRSL
Ga0318549_102830271	3300032041	Soil	VGKIPRIAWLYIGAVVTVAAIAVARGPFSGIQWSQVAVLGLLLAACESSATL
Ga0318556_102814283	3300032043	Soil	VGKLSRIAWLYIGAVVALAAIAVAQGPFSGIQWSQVAVLGLLLAACESS
Ga0326631_1172011	3300032072	Soil	VGRLSRVAWLYIGLVIAAAVVMIAVGPFSGLDWVQVGALGLLLVACESS
Ga0306920_1012109011	3300032261	Soil	VGKLSRIAWLYIGAVIGAAAIAIARGPFTGIQWDIVVALGLLLVACESSATLLNSR
Ga0335075_101852654	3300032896	Soil	VGRLSRAAWLYIGLVVAAAIVMITAGPFEGLDWVQVGALGLLLVACESS
Ga0335083_111948762	3300032954	Soil	VDKLSRVAWIYIGAAIAAAAIVLVKGPYTGLDWSQIGVLGLHLVACESSATLLYARGLAWSANT
Ga0316216_10129402	3300033548	Roots	VSKLSSIAWLYIGAVIAAAAIVLAKGPYTGLDWSQIGVLALLL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077566

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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