Metagenome / Metatranscriptome Family F077523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077523
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	78 residues
Representative Sequence	AQYADLIHRNGGASSDPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAVTQIRSKIGPHHFLPW
Number of Associated Samples	85
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.71 %
% of genes near scaffold ends (potentially truncated)	98.29 %
% of genes from short scaffolds (< 2000 bps)	90.60 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.761 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.350 % of family members)
Environment Ontology (ENVO)	Unclassified (47.009 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.940 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.45% β-sheet: 0.00% Coil/Unstructured: 44.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00296	Bac_luciferase	11.11
PF13520	AA_permease_2	9.40
PF02826	2-Hacid_dh_C	4.27
PF00072	Response_reg	3.42
PF13561	adh_short_C2	3.42
PF00557	Peptidase_M24	3.42
PF08281	Sigma70_r4_2	2.56
PF03746	LamB_YcsF	2.56
PF02687	FtsX	2.56
PF04261	Dyp_perox	1.71
PF01566	Nramp	1.71
PF00248	Aldo_ket_red	0.85
PF08448	PAS_4	0.85
PF01638	HxlR	0.85
PF07677	A2M_recep	0.85
PF07690	MFS_1	0.85
PF00733	Asn_synthase	0.85
PF12867	DinB_2	0.85
PF00198	2-oxoacid_dh	0.85
PF01370	Epimerase	0.85
PF12833	HTH_18	0.85
PF15902	Sortilin-Vps10	0.85
PF11453	DUF2950	0.85
PF00563	EAL	0.85
PF01850	PIN	0.85
PF00378	ECH_1	0.85
PF00389	2-Hacid_dh	0.85
PF09844	DUF2071	0.85
PF00205	TPP_enzyme_M	0.85
PF00892	EamA	0.85
PF04542	Sigma70_r2	0.85
PF03551	PadR	0.85
PF13426	PAS_9	0.85
PF04471	Mrr_cat	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	11.11
COG1540	5-oxoprolinase subunit A	Amino acid transport and metabolism [E]	2.56
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.71
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	1.71
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	1.71
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.85
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.85
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.85
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.85
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.85
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.85
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.76 %
Unclassified	root	N/A	16.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.76 %
Unclassified	root	N/A	16.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.76 %
Unclassified	root	N/A	16.24 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.70 %
Unclassified	root	N/A	16.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	45.30 %
Unclassified	root	N/A	16.24 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	44.44 %
Unclassified	root	N/A	16.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	44.44 %
Unclassified	root	N/A	16.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	41.03 %
Unclassified	root	N/A	16.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	41.03 %
Unclassified	root	N/A	16.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.85 %
Bradyrhizobium yuanmingense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	41.03 %
Unclassified	root	N/A	16.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.27 %
Variovorax sp. JS1663	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. JS1663	0.85 %
Bradyrhizobium yuanmingense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001175\|JGI12649J13570_1027721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	597	Open in IMG/M
3300001175\|JGI12649J13570_1029710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	573	Open in IMG/M
3300001634\|JGI20245J16306_1005339	Not Available	704	Open in IMG/M
3300001648\|JGI20242J16303_106311	Not Available	580	Open in IMG/M
3300001867\|JGI12627J18819_10192459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300002245\|JGIcombinedJ26739_101742852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	523	Open in IMG/M
3300004080\|Ga0062385_11184375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	522	Open in IMG/M
3300004082\|Ga0062384_100023891	All Organisms → cellular organisms → Bacteria	2647	Open in IMG/M
3300004082\|Ga0062384_100139650	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300004082\|Ga0062384_100215084	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300004082\|Ga0062384_100654281	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300004091\|Ga0062387_100258234	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300004091\|Ga0062387_100949004	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300004092\|Ga0062389_104520609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	523	Open in IMG/M
3300004635\|Ga0062388_101535872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	674	Open in IMG/M
3300005591\|Ga0070761_11070490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	513	Open in IMG/M
3300005602\|Ga0070762_10516581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	785	Open in IMG/M
3300005602\|Ga0070762_11253850	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	514	Open in IMG/M
3300005610\|Ga0070763_10191395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1087	Open in IMG/M
3300005712\|Ga0070764_10868119	Not Available	564	Open in IMG/M
3300005921\|Ga0070766_10102586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1696	Open in IMG/M
3300005921\|Ga0070766_10328835	Not Available	988	Open in IMG/M
3300005993\|Ga0080027_10451233	Not Available	520	Open in IMG/M
3300006176\|Ga0070765_100850009	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300009635\|Ga0116117_1027727	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300010341\|Ga0074045_10437583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	845	Open in IMG/M
3300010343\|Ga0074044_10604077	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300010343\|Ga0074044_10898085	Not Available	579	Open in IMG/M
3300014168\|Ga0181534_10969510	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300014199\|Ga0181535_10226154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1138	Open in IMG/M
3300014657\|Ga0181522_10623344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	655	Open in IMG/M
3300017970\|Ga0187783_10933273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	625	Open in IMG/M
3300018012\|Ga0187810_10398710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	578	Open in IMG/M
3300018042\|Ga0187871_10048066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2580	Open in IMG/M
3300018044\|Ga0187890_10536612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	658	Open in IMG/M
3300020580\|Ga0210403_10646436	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300020581\|Ga0210399_11151607	Not Available	618	Open in IMG/M
3300020582\|Ga0210395_11020516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. JS1663	612	Open in IMG/M
3300020582\|Ga0210395_11152053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	571	Open in IMG/M
3300020583\|Ga0210401_10512339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1062	Open in IMG/M
3300020583\|Ga0210401_11432820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	548	Open in IMG/M
3300021088\|Ga0210404_10632386	Not Available	609	Open in IMG/M
3300021178\|Ga0210408_11302401	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	551	Open in IMG/M
3300021181\|Ga0210388_10297121	Not Available	1419	Open in IMG/M
3300021181\|Ga0210388_10414282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1184	Open in IMG/M
3300021181\|Ga0210388_11571125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	547	Open in IMG/M
3300021403\|Ga0210397_10487545	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300021404\|Ga0210389_10436716	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300021404\|Ga0210389_10757474	Not Available	759	Open in IMG/M
3300021405\|Ga0210387_10068219	All Organisms → cellular organisms → Bacteria → Acidobacteria	2903	Open in IMG/M
3300021405\|Ga0210387_10847902	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300021405\|Ga0210387_10950067	Not Available	754	Open in IMG/M
3300021406\|Ga0210386_10563658	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300021406\|Ga0210386_10640506	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300021406\|Ga0210386_11230109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	632	Open in IMG/M
3300021407\|Ga0210383_10040967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3862	Open in IMG/M
3300021407\|Ga0210383_10066456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3012	Open in IMG/M
3300021407\|Ga0210383_10246096	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300021407\|Ga0210383_10987820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	714	Open in IMG/M
3300021407\|Ga0210383_11408630	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300021420\|Ga0210394_10225169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1639	Open in IMG/M
3300021432\|Ga0210384_10395190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1245	Open in IMG/M
3300021433\|Ga0210391_10356022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1148	Open in IMG/M
3300021475\|Ga0210392_10615223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	806	Open in IMG/M
3300021477\|Ga0210398_11545211	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300021559\|Ga0210409_10816945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300024225\|Ga0224572_1058521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	715	Open in IMG/M
3300025414\|Ga0208935_1000531	All Organisms → cellular organisms → Bacteria → Acidobacteria	6858	Open in IMG/M
3300025929\|Ga0207664_11944645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	511	Open in IMG/M
3300026467\|Ga0257154_1022513	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	921	Open in IMG/M
3300027334\|Ga0209529_1074046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	578	Open in IMG/M
3300027575\|Ga0209525_1006015	All Organisms → cellular organisms → Bacteria → Acidobacteria	2810	Open in IMG/M
3300027648\|Ga0209420_1072878	Not Available	1000	Open in IMG/M
3300027667\|Ga0209009_1075212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	851	Open in IMG/M
3300027701\|Ga0209447_10022304	Not Available	1776	Open in IMG/M
3300027729\|Ga0209248_10140038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	723	Open in IMG/M
3300027829\|Ga0209773_10467424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	520	Open in IMG/M
3300027853\|Ga0209274_10420701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	691	Open in IMG/M
3300027879\|Ga0209169_10140375	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300027884\|Ga0209275_10001527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9490	Open in IMG/M
3300027884\|Ga0209275_10146214	Not Available	1249	Open in IMG/M
3300027884\|Ga0209275_10177960	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300027895\|Ga0209624_10669654	Not Available	686	Open in IMG/M
3300027908\|Ga0209006_10566291	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300027908\|Ga0209006_11160326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	606	Open in IMG/M
3300028773\|Ga0302234_10251902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	760	Open in IMG/M
3300028879\|Ga0302229_10340636	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300028906\|Ga0308309_11434340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	591	Open in IMG/M
3300029993\|Ga0302304_10091605	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300030490\|Ga0302184_10108751	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300030862\|Ga0265753_1123950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	543	Open in IMG/M
3300030878\|Ga0265770_1079469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031231\|Ga0170824_116059372	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031236\|Ga0302324_101204071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1009	Open in IMG/M
3300031524\|Ga0302320_11959298	Not Available	551	Open in IMG/M
3300031708\|Ga0310686_103693636	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300031708\|Ga0310686_106365136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14651	Open in IMG/M
3300031708\|Ga0310686_110731140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	625	Open in IMG/M
3300031708\|Ga0310686_114501091	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031711\|Ga0265314_10505754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	635	Open in IMG/M
3300031715\|Ga0307476_10935419	Not Available	639	Open in IMG/M
3300031718\|Ga0307474_10658391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300031718\|Ga0307474_10772640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	759	Open in IMG/M
3300031753\|Ga0307477_10246190	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300031823\|Ga0307478_10015360	All Organisms → cellular organisms → Bacteria	5334	Open in IMG/M
3300031823\|Ga0307478_10084700	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300031837\|Ga0302315_10300454	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300031962\|Ga0307479_10332989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1501	Open in IMG/M
3300031962\|Ga0307479_10584990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1098	Open in IMG/M
3300031962\|Ga0307479_11106252	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	758	Open in IMG/M
3300032180\|Ga0307471_102833724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	615	Open in IMG/M
3300032205\|Ga0307472_100183974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300032895\|Ga0335074_10619852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1072	Open in IMG/M
3300032898\|Ga0335072_10796802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	904	Open in IMG/M
3300032898\|Ga0335072_11191980	Not Available	677	Open in IMG/M
3300033829\|Ga0334854_090387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	732	Open in IMG/M
3300034163\|Ga0370515_0134914	Not Available	1060	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.29%
Host-Associated	Host-Associated	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.20%
Aquatic	Environmental → Aquatic	17.09%
Plants	Host-Associated → Plants	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.36%
Freshwater	Environmental → Aquatic → Freshwater	17.09%
Peat	Environmental → Terrestrial → Peat	6.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.73%
Loam	Environmental → Terrestrial → Soil → Loam	23.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.13%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001634	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011	Environmental	Open in IMG/M
3300001648	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12649J13570_10277212	3300001175	Forest Soil	DVSNRLDATTRSTLGQYSDLIHRNGGATSVPALGALQLFQNNVITQARLLSYIDVYFLLATLGVIALILIAVTKIKPKLGQHHFQPW*
JGI12649J13570_10297101	3300001175	Forest Soil	NLIHRNGGGSSDPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAITRTKPKLGEHHFLLW*
JGI20245J16306_10053392	3300001634	Forest Soil	NGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQVKVKRGSIHFHPW*
JGI20242J16303_1063111	3300001648	Forest Soil	LIHRNGGASSDPALGALQLFQNNVITQSRLFSYIDVYFGLATLGVVALVSIAITRIKPKPGPHLFHPW*
JGI12627J18819_101924591	3300001867	Forest Soil	LAQYAGLIHSNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNLKARLGRHHFLPW*
JGIcombinedJ26739_1017428522	3300002245	Forest Soil	VSNLLDATTRSTLAQYADLIHRNGGATSVPALGALQLFQNNVITQSRLLSYIDIYFGLATLGVVALISIAVTKAKPKLGQHHFHPW*
Ga0062385_111843752	3300004080	Bog Forest Soil	MSLHSSRLLDVSNRLDATTRSTLAQYANLIHRNGGAGSDPALGALQLFQNNVITQSRLFSYIDIYFGLAVLGVVALISIAVTQIEHKLGDRSFLPW*
Ga0062384_1000238911	3300004082	Bog Forest Soil	LLDVANRLDPTVRSTLSQYASLIHRNGGGGSNPSLGALQLFQNEVITQSRLLSYVDNYFGLAVLAAVALLIIAVSQLRSKLGPHHFLPW*
Ga0062384_1001396501	3300004082	Bog Forest Soil	TLAQYAALIHRNGGGSSDPALGALQLFQGDVITQSRLLSYIDIYYGLALLAVVALISLAVTQIKPKVGSIHFHPW*
Ga0062384_1002150842	3300004082	Bog Forest Soil	LHSSRLLDVSNRLDATTRSTLAQYANLIHRNGGSSDPVLGALQLFQNNVITQSRLFSYIDIYFGLAVLGVVAFISIAVTQIERKLGTHHFLPW*
Ga0062384_1006542812	3300004082	Bog Forest Soil	MTLHSSRLLDVSNRLDPTTSSTLAQYANLIHRHGRANSVPAAGALQLFQNNVITQARLFSYIDVSFGLAVIGVVALISLAVSRIKVKRGPIHFHPW*
Ga0062387_1002582342	3300004091	Bog Forest Soil	GNTFGVTAATVLFDRRMTLHSSRLLDVSNRLDPTTTTSLAQYANLIHRHGRPNSVPGAGALQLFQGNVITQARLFSYIDVSFGLAVIGVVALISIAVSRIKIKGGPIHFHPW*
Ga0062387_1009490042	3300004091	Bog Forest Soil	AQYANLIHRNGGASSNPALGALQLFQNDVITQSRLFSYIDIYFGLAVLGVVAVLSIAFTQIKLKLGSIQFHPW*
Ga0062389_1045206092	3300004092	Bog Forest Soil	RLLDISNRLDTSTRSTLGQYANLIHRNGGGSSDPGQGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIVVSRIKLKRGPIHFHPW*
Ga0062388_1015358721	3300004635	Bog Forest Soil	SNRLDATTRSTLAQYANLIHRDGGGSSNPVLGALQLFQNDVITQSRLFSYIDIYFGLAVLGVVAFISIAVTQVERKLGTRHFLPW*
Ga0070761_110704901	3300005591	Soil	LGALQLFQNNVITQSRLLSYIDIYFGLATLGVVALISIAITKIKPKLGPHRFSPW*
Ga0070762_105165811	3300005602	Soil	GGATSVPALGALQLFQNNVITQSRLLSYIDIYFGLATLGVVALISIAFTKTKPKLGQHHFHPW*
Ga0070762_112538502	3300005602	Soil	LDPTVSSTLSQYARLIHRNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNIKARLARHHFLPW*
Ga0070763_101913953	3300005610	Soil	HSSRLLDVSNRLDPTTSTTLAQYANLIHRHGRPNSVPGAGALQLFQGNVITQARLFSYIDVSFGLAVIGVVALISIAVSRIKIKGGPIHFHPW*
Ga0070764_108681191	3300005712	Soil	NGGGSSNPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISITFTRVRSKLDSIHFHPW*
Ga0070766_101025862	3300005921	Soil	ALGALQLFQNNVITQSRLFSYIDIYFGLATLGVVAFISIAISRIKPKPDRHHFLPW*
Ga0070766_103288352	3300005921	Soil	NGGGSSDPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAVSQIKPKLGAHHFLPW*
Ga0080027_104512332	3300005993	Prmafrost Soil	NPLLGALQIFQADVIAQSRVLSYIDIYLGLATLAGLAFILLPITRIRTKLGPNRFHPW*
Ga0070765_1008500092	3300006176	Soil	LIHRNGGASSDPALGALQLFQNNVITQSRLFSYIDVYFGLATLGVVALVSIAITRVKPKPGPHHFHPW*
Ga0116117_10277272	3300009635	Peatland	ATTRSTLAQYANLIHRNGGATSIPSQGALQLFQNNVITQSRLFSYIDIYFGLAMLGLVAVISIAVTQVERKLGPRHFLPW*
Ga0074045_104375832	3300010341	Bog Forest Soil	MFSFRVRRLLGALQLFQVNVIRQSRLLSYIDIYFFLAVLAVLGLLLLAVSRAKNKPCPPHFHGG*
Ga0074044_106040772	3300010343	Bog Forest Soil	DATTRSTLAQYANLIHRNGGGSSDPALGALQLFQNNVITQSRLFSYIDIYFGLATLGVVAFISIAISQIKPKPGRHHFLPW*
Ga0074044_108980852	3300010343	Bog Forest Soil	AQYANLIHRNGGATSIPGLGALQLFQNTVITQSRLFSYIDIYFGLAVLGVIALVSITFTRVRAKLDSIRFHPW*
Ga0181534_109695101	3300014168	Bog	VRSTLAQYAELIHRNGGGSSDPALGALQLFQASVITQSRLLSYIDIYFGLAAIALLALILLVIVRIKPKAGPHHFLSW*
Ga0181535_102261542	3300014199	Bog	VTAVTILFDRRMTFHSSRILDVAHRLDPTVRSTLAQYAELIHRNGGGSSDPALGALQLFQASVITQSRLLSYIDIYFGLAAIALLALILLVIGRIKPKAGPH
Ga0181522_106233442	3300014657	Bog	DVSNRLDATTRSTLLQYTDLIHRNGGATSVPTLGALQLFQNNVITQSRLLSYIDVYFLLATLGVAALILIAVTKIRPKLGQHHFQPW*
Ga0187783_109332731	3300017970	Tropical Peatland	LAQYADLIHRNGGATSVPAQGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAVTKIKPKLGPHYFHPW
Ga0187810_103987102	3300018012	Freshwater Sediment	YANLIHRNGGSGSNPALGALQLFQANVITQSRLLSYIDIYFGLAVIAGIALILLAATRIKNKLGPFHFHPW
Ga0187871_100480663	3300018042	Peatland	RLLDVSNRLDATTRSTLAQYAGLIHRNGGATSVPALGALQLFQSNVITQSRLLSYIDISFGLATLGVVALISVAVTRTRLKLGQHHFHPW
Ga0187890_105366121	3300018044	Peatland	LDATTRSTLVQYTDLIHRNGGATSVPTLGALQLFQNNVITQSRLLSYIDVYFLLATLGVAALILIAVTKIRPKLGQHHFQPW
Ga0210403_106464361	3300020580	Soil	TLAQYAGLIHRNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNIKARLARHHFLPW
Ga0210399_111516072	3300020581	Soil	TTRSTLAQYADLIHRNGGASSDPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAVTQIRSKIGPHHFLPW
Ga0210395_110205162	3300020582	Soil	MALHSSRLLDVSNRLDATTRSALAQYADLIHRNDGPTSVPALDGLQLFQNNVIAQSRLLSYIDIYFGLATLGVVALISITVTKTKPKLGLHHFHPW
Ga0210395_111520531	3300020582	Soil	GGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNIKARLARHHFLPW
Ga0210401_105123391	3300020583	Soil	VMFDRRMTLHSSRLLDVSNRLDATTRSTLAQYADLIHRNCGATSVPALGALQLFQNNVITQSRLLSYIDVSFGLATLGVIALISIAVTKIEPKLGQHHFHPW
Ga0210401_114328201	3300020583	Soil	VSNRLDATTRSTLVQYADLIHRNGGPTSVPGLGALQLFQNNVITQSRLFSYIDIYFGLAALGVVALISIAITRIRPKLGSIHFHPW
Ga0210404_106323861	3300021088	Soil	STLAQYSTLIHRNGGASSDPALGALQLFHNNVITQSRLFSYIDVYFGLATLGVVALVSIAITRVKPKPGPHHFHPW
Ga0210408_113024011	3300021178	Soil	TRSTLAQYSDLIHRNGGATSVPALGALQLFQNNVITQSRLLSYIDIYFGLATLGVVALISIALTKTKPKLGQHHFHPW
Ga0210388_102971212	3300021181	Soil	IHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQVKVKRGSIHFHPW
Ga0210388_104142822	3300021181	Soil	RLLDVANRLDPTVRFTLAQYAGLIHRNGGGGSNPSLGALQLFQNSVITQSRLLSYVDNYFGLAVLAAVALLIIAVSQIRSKLGPHHFLPW
Ga0210388_115711251	3300021181	Soil	HSSRLLDAANRLEPTTRTTLAQYANLIFRNGGATSNPALGALQLFQANVITQSRLFSYIDIYFGLAMLGVVALISIGITRSKFKRSPFHHFHPW
Ga0210397_104875452	3300021403	Soil	PALGALQLFQNNVITQSRLFSYIDIYFGLATLGVVAFISIAISRIKPKPDRHHFLPW
Ga0210389_104367162	3300021404	Soil	AQYADLIHRNGGASSDPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAVTQIRSKIGPHHFLPW
Ga0210389_107574741	3300021404	Soil	ADLIHRNGGPGSVPALGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQAKVKLGSIQFHPW
Ga0210387_100682191	3300021405	Soil	PTLNSTLAQYAGLIHRNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNIKARLARHHFLPW
Ga0210387_108479021	3300021405	Soil	QYANLIHRNGGASSNPALGALQLFQNNVITQSRLFSYIDIYFGLAVLGVVALISIAVTQIERKFGSIQFHPW
Ga0210387_109500671	3300021405	Soil	DLIHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAVTQVERKLGSIQFHPW
Ga0210386_105636581	3300021406	Soil	FTLAQYTDLIHRNGGATSVPALGALQLFQNNVITQSRLLAYIDVSFGLATLGVIALISIAVTKIEPKLGQHHFHPW
Ga0210386_106405062	3300021406	Soil	AGLIHRNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNIKARLARHHFLPW
Ga0210386_112301091	3300021406	Soil	TAATVMFDRRMTLHSSRLLDVSNRLDATTRSTLTQYADLIHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQAKVKLGSIQFHPW
Ga0210383_100409671	3300021407	Soil	LLDVANRLYPTLNSTLAQYAGLIHSNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNLKARLGRHHFLPW
Ga0210383_100664561	3300021407	Soil	GPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAVTQVERKLGSIQFHPW
Ga0210383_102460963	3300021407	Soil	ASNRLDAATRSTLLQYADLIHRNGGGSSDPGLGALQLFQNNVITQSRLFSYIDIYFGLAALGVVALISIAITRIRPRLGSIHFHPW
Ga0210383_109878202	3300021407	Soil	LDPTVRLTLAQYAGLIHRNGGGGSNPSLGALQLFQNSVITQSRLLSYVDNYFGLAVLAAVALLIIAVSQIRSKLGPHHFLPW
Ga0210383_114086302	3300021407	Soil	DATTRSTLTQYADLIHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQVKVKRGSIHFHPW
Ga0210394_102251691	3300021420	Soil	STLAQYADLIHRNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNIKARLARHHFLPW
Ga0210384_103951901	3300021432	Soil	TGATVLFDHRMTLHSSRLLDVANRLDPTLNSTLAQYAGLIHRNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNIKARLARHHFLPW
Ga0210391_103560223	3300021433	Soil	HSSRLLDVSNRLDATTRSTLAQYADLIHRNGGATSVPALGALQLFQNNVITQSRLLSYIDIYFGLATLGVVALISIAVTKAKPKLGQHHFHPW
Ga0210392_106152231	3300021475	Soil	FDRRMTLHSSRLLDISNRLDATTRSTLAQYADLIHRSGGASSDPALGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQIRSKTGPHHFLPW
Ga0210398_115452112	3300021477	Soil	NSVPGAGALQLFQGNVITQARLFSYIDVSFGLAVIGVVALISIAVSRIKIKGGPIHFHPW
Ga0210409_108169451	3300021559	Soil	AQYAGLIHSNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNLKARLGRHHFLPW
Ga0224572_10585211	3300024225	Rhizosphere	LHSSRLLDVSNRLDATTRSTLAQYADLIHRNGGPGSVPALGALQLFQNNVITQSRLFSYIDIYFGLATLGVIALISITFTRVKSKLDSIHFHPW
Ga0208935_10005311	3300025414	Peatland	PSQGALQLFQNNVITQSRLFSYIDIYFGLAMLGLVAVISIAVTQVERKLGPRHFLPW
Ga0207664_119446451	3300025929	Agricultural Soil	TVHSTLGTYSNLIHRNGGGRANPALGALQLFQNNVIIQSRLLSYIDIYVGLAVLGALGLIVLAFTKFKNRLGPHSFHLW
Ga0257154_10225131	3300026467	Soil	TAATVMFDRRMTLHSSRLLDVSNRLDATTRSTLAQYAELIHRNGGATSVPAQGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQAKVKLGSIHFHPW
Ga0209529_10740462	3300027334	Forest Soil	RRMTLHSSRLLDVSNRLDATTRSTLAQYADLIHRNGGATSVPALGALQLFQNNVITQSRLLSYIDIYFGLATLGVVALISIAVTKAKPKLGQHHFHPW
Ga0209525_10060156	3300027575	Forest Soil	HSSRLLDVSNRLDATTSSTLTQYANLIHRNGGGSSNPGLGALQLFQNNVITQSRLFSYIDIYFGLAMLGILALISIAISRVKTKRGPIHFHPW
Ga0209420_10728781	3300027648	Forest Soil	PTSDPNLGALQLFQNNVVTQSRLFSYIDVYFGLATLGVVALISIAITRIKLKRGPIHFHP
Ga0209009_10752122	3300027667	Forest Soil	SSDPALGALQLFQNNVITQSRLFSYIDIYFGLAALGVVALISIAVTQIRSKTGPHHFLPW
Ga0209447_100223043	3300027701	Bog Forest Soil	ATTRSTLTQYADLIHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAVTQTERKLGPRHFLPW
Ga0209248_101400381	3300027729	Bog Forest Soil	QYANLIHHHGRANSVPAAGALQLFQNNVITQARLFSYIDVSFGLAVIGVVALISLAVSRIKVKRGPIHFHPW
Ga0209773_104674241	3300027829	Bog Forest Soil	DATTRSTLAQYADLIHRNGGATSDPTLGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAVTRIKLKRVPTHFHPW
Ga0209274_104207011	3300027853	Soil	NLIHRNGGGSSDPALGALQLFQNDVITQSRLLSYIDIYYGLALLAVVALLSLAFTQIKSKLGPTHFHPW
Ga0209169_101403751	3300027879	Soil	ASSDPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAISRVKPKIGAHHFLL
Ga0209275_100015277	3300027884	Soil	SSRLLDVSNRLDATTRSTLTQYADLIHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQVKVKRGSIHFHPW
Ga0209275_101462141	3300027884	Soil	GASSDPALGALQLFQNNVITQSRLFSYIDVYFGLATLGVVALVSIAITRVKPKPGPHHFHPW
Ga0209275_101779602	3300027884	Soil	SDPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISIAISRVKPKIGAHHFLLW
Ga0209624_106696541	3300027895	Forest Soil	PTTTTTLAQYANLIHRHGRPNSVPGAGALQLFQGNVVTQARLFSYIDVSFGLAVIGVVALISIAVSRIKIKGGPIHFHPW
Ga0209006_105662912	3300027908	Forest Soil	NVGATSDPAQGALQLFQNDVITQGRLFSYIDIYFGLATLGVVALISIAVTRIKLKRGPTHFHPW
Ga0209006_111603261	3300027908	Forest Soil	VLFDRRMTLHSSRLLDVSNRLDATTRSTLTQYADLIHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQVKVKRGSIHFHPW
Ga0302234_102519022	3300028773	Palsa	VSNRLDPTTTTTLAQYANLIHRHGRPNSVPGAGALQLFQGNVITQARLFSYIDVSFGLAVIGVVALISIAVSRIKIKGGPIHFHPW
Ga0302229_103406362	3300028879	Palsa	HRNGGAGSDPVLGALQLFQNNVITQSRLLSYIDIYFGLAVLAAVALISLAVTQIKTKVGPTHFHPW
Ga0308309_114343401	3300028906	Soil	SNRLDATTRSTLAQYADLIHRNGGATSVPALGALQLFQNNVITQSRLLSYIDISFGLATLGVVVLISVAVTKTKLKLGRHHFHPW
Ga0302304_100916051	3300029993	Palsa	GSDPVLGALQLFQNNVITQSRLLSYIDIYFGLAVLAAVALISLAVTQIKTKVGPTHFHPW
Ga0302184_101087511	3300030490	Palsa	LDVTTRSTLAQYANLIHRNGGAGSDPVLGALQLFQNNVITQSRLLSYIDIYFGLAVLAAVALISLAVTQIKTKVGPTHFHPW
Ga0265753_11239501	3300030862	Soil	NGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNIKARLARHHFLPW
Ga0265770_10794691	3300030878	Soil	LNDTTRSTLEQYAALIHRNGGGSSDPGLGALQLFQNNVITQSRLLSYIDIYFGLAVLAAVALVNIAIFFAFSNRGRAPQQTG
Ga0170824_1160593721	3300031231	Forest Soil	NGGGGANPALGALQLFQNNVIIQSRLLSYIDIYVGLAVLGALGLIVLAFTKFKNRLGPHSFHLW
Ga0302324_1012040713	3300031236	Palsa	SSRLLDVSNRLDATTRSTLAQYADLIHRNGGATSVPALGALQLFQNNVITQSRLLSYIDIYFGLATLGVVALISIAVTKAKPKLGQHHFHPW
Ga0302320_119592981	3300031524	Bog	HRNGGGSSDPALGALQLFQASVITQSRLLSYIDIYFGLAAIALLALILLVIVRIKPKAGPHHFLSW
Ga0310686_1036936361	3300031708	Soil	ARYLQSLDDITRTTLAQYANLIHHNGGATSVPALGALQLFQNNVITQSRLLSYIDIYFGLAVLAVLALISLAVTQTRPKPDPHHFHRW
Ga0310686_1063651361	3300031708	Soil	GSSNPALGALQLFQNNVITQSRLFSYIDIYFGLAMLGVVALISITFTRVKSKLDSIHFHP
Ga0310686_1107311402	3300031708	Soil	SNRLDATTRSTLAQYADLIHRNGGSSDPTLGALQLFQNNVITQSRLLSYIDIYFGLAVLGVVALISIAFTRIRHKLSPHRFHPW
Ga0310686_1145010911	3300031708	Soil	HRNGGASSDPALGALQLFQNNAITQSRLFSYIDIYFGLATLGVVAFISIAISRIKPKPDRHHFLPW
Ga0265314_105057542	3300031711	Rhizosphere	MTFHSSRILDVAHRLDPTVRSTLAQYAELIHRNGGGSSDPALGALQIFQGNVITQSRLLSYIDIYFGLAAVALLALILLVIGRIKPKAGPHHFLPR
Ga0307476_109354191	3300031715	Hardwood Forest Soil	YAELIHRNGGAGSDPALGALQLFQNNVITQSRLFSYIDIYFGLAALGVVALISIAITQIRSKTGAHHFLPW
Ga0307474_106583911	3300031718	Hardwood Forest Soil	HSNGGGGSNPSLGALQLFQNQVITQSRLLSYVDNYFGLALLAAVALIIIAFSNLKARLGRHHFLPW
Ga0307474_107726402	3300031718	Hardwood Forest Soil	RMTLHSSRLLDISNRLDATTRSTLAQYAALIHRNGGPSSDPALGALQLFQNNVITQSRLFSYIDVYFGLATLGVVALVSIAITRIKPKPGPHHFHPW
Ga0307477_102461901	3300031753	Hardwood Forest Soil	PSSDPALGALQLFQNNVITQSRLFSYIDVYFGLATLGVVALVSIAITRIKPKPGPHHFHP
Ga0307478_100153601	3300031823	Hardwood Forest Soil	GNTFGVTAATVMFDRRMTLHSSRLLDVSNRLDTTTRSTLMQYADLIHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLATLGVVALISIAITQVKVKRGSIHFHPW
Ga0307478_100847004	3300031823	Hardwood Forest Soil	IHRNGGATSVPALGALQLFQNNVITQSRLLAYIDVSFGLATLGVIALISIAVTKIEPKLGQHHFHPW
Ga0302315_103004541	3300031837	Palsa	NGGAGSDPVLGALQLFQNNVITQSRLLSYIDIYFGLAVLAAVALISLAVTQIKTKVGPTHFHPW
Ga0307479_103329891	3300031962	Hardwood Forest Soil	TLAQYAGLIHRNGGGGSNPSLGALQLFQNDVITQSRLLSYVDNYFGLAVLAAVALFIIAVSNLKSKLGPHHFLPW
Ga0307479_105849902	3300031962	Hardwood Forest Soil	LAQYAGLIHRNGGGGSNPSLGALQLFQNDVITQSRLLSYVDNYFGLALLAAVALFIIAVSNLKSKLGPHHFLPW
Ga0307479_111062521	3300031962	Hardwood Forest Soil	GLIHRNGGGGSNPSLGALQLFQNDVITQSRLLSYVDNYFGLAVLAAVALFIIAVSNIKSKLGPHHFLPW
Ga0307471_1028337241	3300032180	Hardwood Forest Soil	GSNPSLGALQLFQNDVITQSRLLSYVDNYFGLALLAAVALFIIAVSNLKSKLGPHHFLPW
Ga0307472_1001839741	3300032205	Hardwood Forest Soil	GLIHRNGGGGSNPSLGALQLFQSDVITQSRLLSYVDNYFGLAVLAAVALFIIAVSNLKSKLGPHHFLPW
Ga0335074_106198521	3300032895	Soil	HSSRLLDIANRLDATTRSTLAQYALMIHRNAGAGSDPTLGALQLFQANVITQSRLLSYIDVYFGLVVLAVVALISLAVGRARAKPGRHHHFLPW
Ga0335072_107968021	3300032898	Soil	GGATSNPALGALQLFQANVITQSRLFSYIDIYFGLAMLGVVALISIGITRSKFKRSPFHHFHPW
Ga0335072_111919801	3300032898	Soil	RNVGTASNPFLGALQLFENNVITQSRVLSYSDIYFGLAMLGVVALVVVGFTSVKQKTAPIHFHLW
Ga0334854_090387_20_325	3300033829	Soil	MFDRRMTLHSSRLLDVSNRLDATTRSTLAQYADLIHRNGGATSVPALGALQLFQNNVITQSRLLSYIDVSFGLATLGVIALISIAVTTIDPKLGQHHFHPW
Ga0370515_0134914_846_1058	3300034163	Untreated Peat Soil	ADLIHRNGGPGSVPGLGALQLFQNNVITQSRLFSYIDIYFGLAVLGVVALISIAITQAKVKLGSIHFHPW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077523

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences