Metagenome / Metatranscriptome Family F077375

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077375
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	44 residues
Representative Sequence	MVGKIARGAYVLVVGTMFVAWVITFNKEAPAKPQTGPQVWYIHS
Number of Associated Samples	103
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.65 %
% of genes near scaffold ends (potentially truncated)	38.46 %
% of genes from short scaffolds (< 2000 bps)	82.91 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.991 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (13.675 % of family members)
Environment Ontology (ENVO)	Unclassified (29.060 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.06% β-sheet: 0.00% Coil/Unstructured: 56.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF02826	2-Hacid_dh_C	20.51
PF00389	2-Hacid_dh	18.80
PF12697	Abhydrolase_6	14.53
PF12146	Hydrolase_4	2.56
PF13414	TPR_11	1.71
PF00486	Trans_reg_C	1.71
PF08386	Abhydrolase_4	1.71
PF13279	4HBT_2	1.71
PF00561	Abhydrolase_1	1.71
PF13361	UvrD_C	1.71
PF03401	TctC	0.85
PF05170	AsmA	0.85
PF07043	DUF1328	0.85
PF13561	adh_short_C2	0.85
PF00884	Sulfatase	0.85
PF13181	TPR_8	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.85
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.99 %
Unclassified	root	N/A	47.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.75 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.66 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.98 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	5.13 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	5.13 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	5.13 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.27 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	2.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.56 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2.56 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	5.13 %
Nordella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella	5.13 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.27 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	2.56 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	2.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
unclassified Nordella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella	5.13 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	5.13 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.27 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	2.56 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	2.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.01 %
Nordella sp. HKS 07	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	5.13 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	5.13 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.27 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	2.56 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	2.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0687740	All Organisms → cellular organisms → Bacteria	3313	Open in IMG/M
3300000787\|JGI11643J11755_11637377	Not Available	544	Open in IMG/M
3300000890\|JGI11643J12802_11015647	Not Available	987	Open in IMG/M
3300000953\|JGI11615J12901_10889881	Not Available	845	Open in IMG/M
3300001431\|F14TB_100062845	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300003324\|soilH2_10160894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1454	Open in IMG/M
3300004020\|Ga0055440_10010130	Not Available	1681	Open in IMG/M
3300004058\|Ga0055498_10005789	Not Available	1443	Open in IMG/M
3300004114\|Ga0062593_100062889	Not Available	2401	Open in IMG/M
3300004114\|Ga0062593_103002755	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300004157\|Ga0062590_100159300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	1562	Open in IMG/M
3300004463\|Ga0063356_103769450	Not Available	653	Open in IMG/M
3300004479\|Ga0062595_100073271	Not Available	1694	Open in IMG/M
3300004479\|Ga0062595_101477941	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300004479\|Ga0062595_101520932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	618	Open in IMG/M
3300004480\|Ga0062592_100399159	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300004643\|Ga0062591_100626295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	957	Open in IMG/M
3300004643\|Ga0062591_101149564	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005146\|Ga0066817_1022796	Not Available	586	Open in IMG/M
3300005161\|Ga0066807_1006027	Not Available	1043	Open in IMG/M
3300005183\|Ga0068993_10091054	Not Available	962	Open in IMG/M
3300005185\|Ga0066811_1021381	Not Available	556	Open in IMG/M
3300005331\|Ga0070670_100017245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6193	Open in IMG/M
3300005332\|Ga0066388_100776509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	1554	Open in IMG/M
3300005332\|Ga0066388_102127327	Not Available	1010	Open in IMG/M
3300005332\|Ga0066388_103938641	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005332\|Ga0066388_105710967	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005367\|Ga0070667_101359849	Not Available	666	Open in IMG/M
3300005441\|Ga0070700_100187315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1444	Open in IMG/M
3300005518\|Ga0070699_102041391	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005529\|Ga0070741_10002895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	44368	Open in IMG/M
3300005543\|Ga0070672_100488690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1064	Open in IMG/M
3300005937\|Ga0081455_10000185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	78750	Open in IMG/M
3300006058\|Ga0075432_10064511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	1308	Open in IMG/M
3300006353\|Ga0075370_10168241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	1288	Open in IMG/M
3300006581\|Ga0074048_13300813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1359	Open in IMG/M
3300006852\|Ga0075433_10697501	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300006904\|Ga0075424_100379329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1507	Open in IMG/M
3300006954\|Ga0079219_10271570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	1026	Open in IMG/M
3300009011\|Ga0105251_10290875	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300009092\|Ga0105250_10107306	All Organisms → cellular organisms → Bacteria → Proteobacteria	1142	Open in IMG/M
3300009156\|Ga0111538_10302882	Not Available	2023	Open in IMG/M
3300010046\|Ga0126384_10953791	Not Available	778	Open in IMG/M
3300010047\|Ga0126382_10005375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5766	Open in IMG/M
3300010362\|Ga0126377_10002409	All Organisms → cellular organisms → Bacteria	12869	Open in IMG/M
3300010362\|Ga0126377_10374325	Not Available	1428	Open in IMG/M
3300010362\|Ga0126377_10873175	Not Available	961	Open in IMG/M
3300010371\|Ga0134125_10074528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3775	Open in IMG/M
3300010371\|Ga0134125_10133805	All Organisms → cellular organisms → Bacteria → Proteobacteria	2760	Open in IMG/M
3300010373\|Ga0134128_10279351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1871	Open in IMG/M
3300010373\|Ga0134128_10761753	Not Available	1074	Open in IMG/M
3300012488\|Ga0157343_1022118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	584	Open in IMG/M
3300012499\|Ga0157350_1026094	Not Available	620	Open in IMG/M
3300012501\|Ga0157351_1000798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1827	Open in IMG/M
3300012507\|Ga0157342_1000244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2998	Open in IMG/M
3300012892\|Ga0157294_10042645	Not Available	999	Open in IMG/M
3300012898\|Ga0157293_10035883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1029	Open in IMG/M
3300012899\|Ga0157299_10062607	Not Available	869	Open in IMG/M
3300012907\|Ga0157283_10019556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1264	Open in IMG/M
3300012916\|Ga0157310_10451673	Not Available	547	Open in IMG/M
3300012960\|Ga0164301_10910186	Not Available	683	Open in IMG/M
3300014308\|Ga0075354_1016038	Not Available	1150	Open in IMG/M
3300014318\|Ga0075351_1011414	Not Available	1271	Open in IMG/M
3300014321\|Ga0075353_1077252	Not Available	741	Open in IMG/M
3300015372\|Ga0132256_100166320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2228	Open in IMG/M
3300015372\|Ga0132256_103160371	Not Available	554	Open in IMG/M
3300015374\|Ga0132255_102183889	Not Available	844	Open in IMG/M
3300017927\|Ga0187824_10076481	Not Available	1057	Open in IMG/M
3300017993\|Ga0187823_10061515	Not Available	1054	Open in IMG/M
3300017994\|Ga0187822_10110390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	849	Open in IMG/M
3300019356\|Ga0173481_10001527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5621	Open in IMG/M
3300019356\|Ga0173481_10002864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4403	Open in IMG/M
3300019362\|Ga0173479_10405575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	659	Open in IMG/M
3300021445\|Ga0182009_10055365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	1693	Open in IMG/M
3300022883\|Ga0247786_1089520	Not Available	657	Open in IMG/M
3300023072\|Ga0247799_1097421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	527	Open in IMG/M
3300023073\|Ga0247744_1032037	Not Available	806	Open in IMG/M
3300025271\|Ga0207666_1007247	Not Available	1456	Open in IMG/M
3300025549\|Ga0210094_1025408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	972	Open in IMG/M
3300025912\|Ga0207707_10794955	Not Available	788	Open in IMG/M
3300025914\|Ga0207671_10134051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1903	Open in IMG/M
3300025917\|Ga0207660_10819604	Not Available	759	Open in IMG/M
3300025919\|Ga0207657_10945606	Not Available	663	Open in IMG/M
3300025921\|Ga0207652_10175346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1925	Open in IMG/M
3300025922\|Ga0207646_10685896	Not Available	916	Open in IMG/M
3300025933\|Ga0207706_11613649	Not Available	525	Open in IMG/M
3300025935\|Ga0207709_11389509	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300025940\|Ga0207691_10453299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1091	Open in IMG/M
3300025941\|Ga0207711_10286792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1517	Open in IMG/M
3300025945\|Ga0207679_10180706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1745	Open in IMG/M
3300025955\|Ga0210071_1016446	Not Available	895	Open in IMG/M
3300026067\|Ga0207678_10652488	Not Available	925	Open in IMG/M
3300026088\|Ga0207641_10658066	Not Available	1029	Open in IMG/M
3300026089\|Ga0207648_10091937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	2653	Open in IMG/M
3300026452\|Ga0256821_1004594	Not Available	1271	Open in IMG/M
3300026718\|Ga0207501_102619	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300026754\|Ga0207631_102790	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026759\|Ga0207527_101098	Not Available	860	Open in IMG/M
3300026770\|Ga0207537_102722	Not Available	641	Open in IMG/M
3300026828\|Ga0207502_102710	Not Available	817	Open in IMG/M
3300026960\|Ga0207582_1007753	Not Available	933	Open in IMG/M
3300027252\|Ga0209973_1022313	Not Available	849	Open in IMG/M
3300027360\|Ga0209969_1075922	Not Available	536	Open in IMG/M
3300027400\|Ga0207560_100689	Not Available	1021	Open in IMG/M
3300027614\|Ga0209970_1015336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1275	Open in IMG/M
3300031538\|Ga0310888_10006227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4264	Open in IMG/M
3300031716\|Ga0310813_10002239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11772	Open in IMG/M
3300031716\|Ga0310813_11353139	Not Available	659	Open in IMG/M
3300031720\|Ga0307469_10033633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3015	Open in IMG/M
3300031740\|Ga0307468_100351824	Not Available	1099	Open in IMG/M
3300032000\|Ga0310903_10100767	Not Available	1228	Open in IMG/M
3300032017\|Ga0310899_10305393	Not Available	739	Open in IMG/M
3300032174\|Ga0307470_11850766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	512	Open in IMG/M
3300033004\|Ga0335084_10081088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3365	Open in IMG/M
3300033412\|Ga0310810_10008013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12118	Open in IMG/M
3300033475\|Ga0310811_10671989	Not Available	1012	Open in IMG/M
3300033513\|Ga0316628_100329377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1912	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.50%
Host-Associated	Host-Associated	25.64%
Engineered	Engineered	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.81%
Plants	Host-Associated → Plants	25.64%
Aquatic	Environmental → Aquatic	7.69%
Solid Waste	Engineered → Solid Waste	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.55%
Marine	Environmental → Aquatic → Marine	4.27%
Freshwater	Environmental → Aquatic → Freshwater	3.42%
Roots	Host-Associated → Plants → Roots	0.85%
Grass	Engineered → Solid Waste → Grass	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.14%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.85%
Composting	Engineered → Solid Waste → Grass → Composting	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	17.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.13%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.85%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	13.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.56%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300026718	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A4-12 (SPAdes)	Environmental	Open in IMG/M
3300026754	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01K3-12 (SPAdes)	Environmental	Open in IMG/M
3300026759	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3w-12 (SPAdes)	Environmental	Open in IMG/M
3300026770	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06K1-12 (SPAdes)	Environmental	Open in IMG/M
3300026828	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A5-12 (SPAdes)	Environmental	Open in IMG/M
3300026960	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027400	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_06877403	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MVGKIARGAYVFVVGTMIVAWVIAFNKEAPASPQTGPQVWYIHS*
JGI11643J11755_116373772	3300000787	Soil	MVGKIARGAYVLVVGTMFVAWVITFNKEAPAKPQTGPQVWYIHS*
JGI11643J12802_110156472	3300000890	Soil	MIGKIARGAYVAVVATMFVAWVVSFNKEVPAQPKPGPQIWYLHS*
JGI11615J12901_108898812	3300000953	Soil	MVEKIARGAYVFVVGTMIIAWVVSFNKETPPGPQTGPQVWYIHS*
F14TB_1000628451	3300001431	Soil	MIGKIARGAYVLVVGTMVVAWAISFNQEAPAKPQPQTGPQIWYI
soilH2_101608942	3300003324	Sugarcane Root And Bulk Soil	MIGKVARGTYVLVVATMFVAWIISFNKEAPAKPQRPGPQVWHIYS*
Ga0055440_100101302	3300004020	Natural And Restored Wetlands	MVGKIARGAYVLVVGTMFVVWAITFNKEAPAKPQTGLQVWYIYS*
Ga0055498_100057893	3300004058	Natural And Restored Wetlands	MVGKIARGAYVLVVGTMFVVWAITFNKEAPAKPLTGPQVWYIHS*
Ga0062593_1000628892	3300004114	Soil	MIGKIARGAYVLVVGTMVVAWVVSFNKEAPAKPQPQTGPQIWYIHS*
Ga0062593_1030027551	3300004114	Soil	AMVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS*
Ga0062590_1001593002	3300004157	Soil	MIGKIARGAYVLVVGTMVVAWVISFNKEAPAKPQPQTGPQIWYIHS*
Ga0063356_1037694502	3300004463	Arabidopsis Thaliana Rhizosphere	MIGKIARGAYVLVVGTMVVAWVVSFNKEAAPKPQTTGPQVWYIHS*
Ga0062595_1000732714	3300004479	Soil	ARGAYVLVVGTMVVAWVVSFNKEAPAKPQPQTGPQIWYIHS*
Ga0062595_1014779413	3300004479	Soil	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS*
Ga0062595_1015209321	3300004479	Soil	MAGKVARGTYLLVVATMIVVWLVTFNKEAPAAPQPEPQVWQIYS*
Ga0062592_1003991593	3300004480	Soil	MIGKIARGAYVFVVGTMIAAWVVSFNKEVPARPQAGPQVWYIHS*
Ga0062591_1006262953	3300004643	Soil	MVGKIARGAYVLVVGTMFVAWVLTFNKEAPAKPQTGPQVWYIHS*
Ga0062591_1011495642	3300004643	Soil	MIGKIARGAYVAVVATMFVAWVVSFNKEVPAQPKPGPQVWYIHS*
Ga0066817_10227962	3300005146	Soil	MVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0066807_10060271	3300005161	Soil	MVGKIARGAYVFVVATMFVAWIISFNKEASATPQTTGPQVWYIH
Ga0068993_100910542	3300005183	Natural And Restored Wetlands	MVGKIARGAYVLVVGTMFVVWAITFNKEAPAKPQTGLQVRYIYS*
Ga0066811_10213811	3300005185	Soil	AAMVGKIARGAYVFVVATMFVAWIISFNKEAPATPQTAGPQVWYIHS*
Ga0070670_1000172457	3300005331	Switchgrass Rhizosphere	MIGKIARGAYVLVVGTMVVAWVVSFNKEAPAKPQPQTGAQIWYIHS*
Ga0066388_1007765093	3300005332	Tropical Forest Soil	MIGKIARGAYVLVVGTMVVTWVVSFNKEVPAKPQTSPQVWYIYS*
Ga0066388_1021273271	3300005332	Tropical Forest Soil	LTKKSGSVAMIGKIARGAYVLAVGTMVVAWVVSFNKEVPAKPQTGPQIWYIYS*
Ga0066388_1039386413	3300005332	Tropical Forest Soil	MIGKIARGAYVLVVGTMVVAWAISFNQEAPAEPQPQTSPQVWYIYS*
Ga0066388_1057109671	3300005332	Tropical Forest Soil	MIGKIARGAYVLVVGTMVVAWAISFNQKAPAEPQPQTSPQVWYIYS*
Ga0070667_1013598492	3300005367	Switchgrass Rhizosphere	KKYGSAAMVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0070700_1001873153	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MVGKIARGAYVFVVGMMIVGWVISFNKEVPARPQTGPQVWYIYS*
Ga0070699_1020413912	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIGKIARGAYVAVVATMFVAWVVSFNKEVPAQPKPGPQVWYIHP*
Ga0070741_100028958	3300005529	Surface Soil	MIGKIARGAYVLIVGTMIVAWVISLQKQVPPEKPKPGPHVWRMYS*
Ga0070672_1004886903	3300005543	Miscanthus Rhizosphere	AAMVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0081455_1000018560	3300005937	Tabebuia Heterophylla Rhizosphere	MIGKIARGAYVLAVGTMVVAWVVSFNKEVPAKPQTGPQIWYIYS*
Ga0075432_100645111	3300006058	Populus Rhizosphere	KKYGSAAMVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS*
Ga0075370_101682411	3300006353	Populus Endosphere	VVGTMVVAWVVSFNKEAPAKPQPQTGPQIWYIHS*
Ga0074048_133008133	3300006581	Soil	MVGKIARGAYVFVVATMFVAWIISFNKEAPATPQTAGPQV
Ga0075433_106975012	3300006852	Populus Rhizosphere	MIGKIARGAYVLVVGTMVVAWVVSFNKEVPAKPQTGPQVWYIHS*
Ga0075424_1003793293	3300006904	Populus Rhizosphere	MIGKIARGAYVLVVGTMVVAWVVSFNKEAPAKPQPQRGAQIWYIHS*
Ga0079219_102715703	3300006954	Agricultural Soil	QVVGKIARGAYVFVVGTMIVAWVIAFNKEAPASPQTGPQVWYIHS*
Ga0105251_102908753	3300009011	Switchgrass Rhizosphere	AAMVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS*
Ga0105250_101073063	3300009092	Switchgrass Rhizosphere	VLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS*
Ga0111538_103028823	3300009156	Populus Rhizosphere	MAGKIARGAYVLVVGTMVVAWVVSFNKEAPAKPRPSPQIWYIHS*
Ga0126384_109537911	3300010046	Tropical Forest Soil	MVGKIARGAYVFVVGTMIVAWVIAFNKEVPASPQTGPQIWYIHS*
Ga0126382_100053756	3300010047	Tropical Forest Soil	MIGKIARGAYVLVVGTMVVTWVVSFNKEVPAKPQTGPQVWYIYS*
Ga0126377_100024097	3300010362	Tropical Forest Soil	MIGKIARGAYVLFVGTMVVAWAISFNKEAPAKPQPQTTPQIWYIYS*
Ga0126377_103743252	3300010362	Tropical Forest Soil	MVGKIARGAYVLVVGTMVVAWAISFNQEAPVEPQPQTSPQVWYIYS*
Ga0126377_108731753	3300010362	Tropical Forest Soil	AMIGKIARGAYVLVVGTMVVTWVVSFNKEVPAKPQTSPQVWYIYS*
Ga0134125_100745284	3300010371	Terrestrial Soil	MIGKIARGAYVLAVSTMVVGWVISFNKEAPAKPQPQTGPQVWYIHS*
Ga0134125_101338051	3300010371	Terrestrial Soil	MAGKVARGTYLLVVATMIVVWLVTFNKEAPAAAPQPEPQVWQIYS*
Ga0134128_102793512	3300010373	Terrestrial Soil	MVGKIARGAYVFVVGMMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0134128_107617531	3300010373	Terrestrial Soil	MVGTVARGTYLLIVATMIVVWLVTFNKEAPAAPQPEPQVWQIYS*
Ga0157343_10221181	3300012488	Arabidopsis Rhizosphere	MVGKIARGAYVFVVGTMIVAWVIAFNKEVPARPQTGPQVWYI
Ga0157350_10260943	3300012499	Unplanted Soil	GSAAMVGKIARGAYVFVVGTMIAAWVISFNKEVPARPQTGPQVWYIYS*
Ga0157351_10007981	3300012501	Unplanted Soil	PHKKYGSAAMVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0157342_10002443	3300012507	Arabidopsis Rhizosphere	MVGKIARGAYIFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0157294_100426451	3300012892	Soil	SKKDGSAAMVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS*
Ga0157293_100358833	3300012898	Soil	RGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0157299_100626072	3300012899	Soil	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQPGPQVSYMYS*
Ga0157283_100195561	3300012907	Soil	KKYGSAAMVGKIARGAYVFVVGMMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0157310_104516731	3300012916	Soil	MIGKIARGAYVLVVGTMVVAWVVSFNKEAPPKPKTTSPQVWYVYS*
Ga0164301_109101861	3300012960	Soil	VFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS*
Ga0075354_10160383	3300014308	Natural And Restored Wetlands	MVGKIARGAYVLVVGPMFVVWAITFNKEAPAKPLTGPQVWYIHS*
Ga0075351_10114142	3300014318	Natural And Restored Wetlands	MIGKIARGAYVLVVGTMFVTWVVTFNKEAPAKPQTGPQVWYIHS*
Ga0075353_10772522	3300014321	Natural And Restored Wetlands	MVGKIARGSYVLVVGTMFVVWAITFNKEAPAKPLTGPQVWYIHS*
Ga0132256_1001663203	3300015372	Arabidopsis Rhizosphere	MVGKIARGAYVLVVGTMVVAWVISVNKEAPANPQQTGPQVSYMYS*
Ga0132256_1031603713	3300015372	Arabidopsis Rhizosphere	MVGKIARGAYVFVVATMFVAWIISFNKEASATPQTTGPQVWYIHS*
Ga0132255_1021838892	3300015374	Arabidopsis Rhizosphere	MIGKIARGAYVLVVGTMFVTWVITFNKEAPAKPQTGPQVWYIHS*
Ga0187824_100764812	3300017927	Freshwater Sediment	MVGKVARGTYLLVVATMIVVWLVTFNKEAPAAAPQPEPQVWQIYS
Ga0187823_100615151	3300017993	Freshwater Sediment	MVGKVARGTYLLVVATMIVVWLVTFNKEAPAAPQPEPQVWQIYS
Ga0187822_101103903	3300017994	Freshwater Sediment	MAGKVARGTYLLVVATMIVVWLVTFNKEAPAAPQPEPQVWQIYS
Ga0173481_100015272	3300019356	Soil	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS
Ga0173481_100028643	3300019356	Soil	MVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS
Ga0173479_104055752	3300019362	Soil	MIGKIARGAYVLVVGTMVVAWVVSFNKEAPAKPQPQTGPQIWYIHS
Ga0182009_100553653	3300021445	Soil	MIGKIARGAYVLVVGTMVVAWVVSFNKEVPAKPQPQTGPQIWYIHS
Ga0247786_10895202	3300022883	Soil	MIGKIARGAYVLVVGTMVVAWVVSFNKEAAPKPQTTGPQVWYIHS
Ga0247799_10974213	3300023072	Soil	AYVLVVGTMVVAWVVSFNKEAAPKPQTTGPQVWYIHS
Ga0247744_10320373	3300023073	Soil	YPHKKYGSAAMVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS
Ga0207666_10072472	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQIGPQVWYIYS
Ga0210094_10254081	3300025549	Natural And Restored Wetlands	MVGKIARGAYVLVVGTMFVVWAITFNKEAPAKPQTGLQVWYIYS
Ga0207707_107949552	3300025912	Corn Rhizosphere	MIGKIARGAYVAVVATMFVAWVVSFNKEVPAQPKPGPQVWYIHS
Ga0207671_101340511	3300025914	Corn Rhizosphere	LTKKYGSAAMVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS
Ga0207660_108196041	3300025917	Corn Rhizosphere	MIGKIARGAYVLVVGTMVVAWVVSFNKEAAPKPQTTGPQV
Ga0207657_109456062	3300025919	Corn Rhizosphere	MVGKIARGAYVLVVGTMFVAWVLTFNKEAPAKPQPQTGPQIWYIHS
Ga0207652_101753464	3300025921	Corn Rhizosphere	YGSAAMVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS
Ga0207646_106858962	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQ
Ga0207706_116136492	3300025933	Corn Rhizosphere	MVGKIARGAYVLVVGTMFVAWVLTFNKEAPAKPQTGPQVWYIHS
Ga0207709_113895091	3300025935	Miscanthus Rhizosphere	AYVLVVGTMFVAWVLTFNKEAPAKPQTGPQVWYIHS
Ga0207691_104532993	3300025940	Miscanthus Rhizosphere	DYPHKKYGSAAMVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS
Ga0207711_102867921	3300025941	Switchgrass Rhizosphere	MIGKIARGAYVLVVGTMVVAWVVSFNKEAPAKPQPQ
Ga0207679_101807063	3300025945	Corn Rhizosphere	MVGKIARGAYVFVVGTMIVAWVIAFNKEAPASPQTGPQVWYIHS
Ga0210071_10164462	3300025955	Natural And Restored Wetlands	MVGKIARGAYVLVVGTMFVVWAITFNKEAPAKPLTGPQVWYIHS
Ga0207678_106524882	3300026067	Corn Rhizosphere	MVGKIARGAYVLVVGTMFVAWVLTFNKEAPAKPQTG
Ga0207641_106580661	3300026088	Switchgrass Rhizosphere	MIGKIARGAYVLVVGTMVVAWVVSFNKEAPAKPQPQTGPQ
Ga0207648_100919374	3300026089	Miscanthus Rhizosphere	AYVFVVGMMIVGWVISFNKEVPARPQTGPQVWYIYS
Ga0256821_10045942	3300026452	Sediment	MVGKIARGAYVLVVGTMFVVWAITFNKEAPAKPQTGLQVWYIHS
Ga0207501_1026191	3300026718	Soil	VGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS
Ga0207631_1027903	3300026754	Soil	YGSAAMVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS
Ga0207527_1010982	3300026759	Soil	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYM
Ga0207537_1027222	3300026770	Soil	MVGKIARGAYVFVVGMMIVAWVISFNKEVPARPQTGPQVWYIYS
Ga0207502_1027101	3300026828	Soil	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQ
Ga0207582_10077533	3300026960	Soil	ARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS
Ga0209973_10223131	3300027252	Arabidopsis Thaliana Rhizosphere	MVGKIARGAYVFVVGTMIVAWVVSFNKEAPARPQTGPQVWYVHS
Ga0209969_10759221	3300027360	Arabidopsis Thaliana Rhizosphere	MIGKIARGAYVAVVATMFVAWVVSFNKEGPAQPKSGPQIWYLHS
Ga0207560_1006891	3300027400	Soil	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSY
Ga0209970_10153362	3300027614	Arabidopsis Thaliana Rhizosphere	MVGKIARGAYVFVVGMMIVGWVISFNKEVPARPQTGPQVWYIYS
Ga0310888_100062276	3300031538	Soil	AYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMYS
Ga0310813_100022396	3300031716	Soil	MVEKIARGAYVFVVGTMIIAWVVSFNKETPPGPQTGPQVWYIHS
Ga0310813_113531392	3300031716	Soil	MVGTVARGTYLLVVATMIVVWLVTFNKEAPAAPQPEPQVWQIYS
Ga0307469_100336332	3300031720	Hardwood Forest Soil	MIGKIARGAYVLVVGTMVVAWAISFNQEAPAKPQPQTGPQIWYIHS
Ga0307468_1003518242	3300031740	Hardwood Forest Soil	MIGKIARGAYVLVVGTMVVAWVISFNREVPAKPQPQTGPQIWYIHS
Ga0310903_101007672	3300032000	Soil	MVGKIARGAYVFVVATMFVAWIISFNKEASATPQTTGPQVWYIHS
Ga0310899_103053931	3300032017	Soil	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPQVSYMY
Ga0307470_118507662	3300032174	Hardwood Forest Soil	MVGKIARGAYVLVVGTMVVAWVISVNKEAPAKPQQTGPHVSYMYS
Ga0335084_100810882	3300033004	Soil	MVGKIARGAYVLVVGTMFVAWVITFNKEAPAKPQTGPQVWYIHS
Ga0310810_100080136	3300033412	Soil	MIGKVARGAYVLVVGTMVVAWVVSFNKEVPAKPQPQTGPQIWYIHS
Ga0310811_106719893	3300033475	Soil	KKYGSAAMVGKIARGAYVFVVGTMIVAWVISFNKEVPARPQTGPQVWYIYS
Ga0316628_1003293773	3300033513	Soil	MIGKIARGAYVLVVTTMFVAWAISFNKPAPAAPEPAPQISYMYS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077375

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences