Metagenome / Metatranscriptome Family F077261

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077261
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	68 residues
Representative Sequence	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGFRW
Number of Associated Samples	73
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.22 %
% of genes near scaffold ends (potentially truncated)	18.80 %
% of genes from short scaffolds (< 2000 bps)	70.94 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (44.444 % of family members)
Environment Ontology (ENVO)	Unclassified (45.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.162 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.40% β-sheet: 18.56% Coil/Unstructured: 68.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00145	DNA_methylase	8.62
PF13438	DUF4113	4.31
PF09996	DUF2237	2.59
PF10592	AIPR	2.59
PF01555	N6_N4_Mtase	1.72
PF04542	Sigma70_r2	1.72
PF13646	HEAT_2	1.72
PF04664	OGFr_N	1.72
PF04191	PEMT	1.72
PF01807	zf-CHC2	1.72
PF01844	HNH	0.86
PF01380	SIS	0.86
PF01878	EVE	0.86
PF05930	Phage_AlpA	0.86
PF09019	EcoRII-C	0.86
PF02976	MutH	0.86
PF00589	Phage_integrase	0.86
PF10593	Z1	0.86
PF02086	MethyltransfD12	0.86
PF12705	PDDEXK_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	8.62
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	1.72
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.72
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.72
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.72
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.72
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.72
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.86
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.86
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.86
COG3066	DNA mismatch repair protein MutH	Replication, recombination and repair [L]	0.86
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.86
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	31.62 %
Viruses	superkingdom	All Organisms → Viruses	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.71 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	5.13 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.71 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.71 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
SAR86 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	5.13 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.71 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	1.71 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	1.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.85 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	2.56 %
Candidatus Methylopumilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus	1.71 %
SAR86 cluster bacterium SAR86B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	1.71 %
Colwellia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia	1.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.85 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	2.56 %
Candidatus Methylopumilus universalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus → Candidatus Methylopumilus universalis	1.71 %
SAR86 cluster bacterium SAR86B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	1.71 %
Colwellia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia	1.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Balneicellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Balneicellaceae	0.85 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	2.56 %
Candidatus Methylopumilus universalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus → Candidatus Methylopumilus universalis	1.71 %
SAR86 cluster bacterium SAR86B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	1.71 %
Colwellia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia	1.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Balneicella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Balneicellaceae → Balneicella	0.85 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	2.56 %
Candidatus Methylopumilus universalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus → Candidatus Methylopumilus universalis	1.71 %
SAR86 cluster bacterium SAR86B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	1.71 %
Colwellia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia	1.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.71 %
Balneicella halophila	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Balneicellaceae → Balneicella → Balneicella halophila	0.85 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000973\|BBAY93_10102202	Not Available	729	Open in IMG/M
3300001348\|JGI20154J14316_10051965	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300001351\|JGI20153J14318_10142193	Not Available	592	Open in IMG/M
3300001939\|GOS2225_1012387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia	943	Open in IMG/M
3300001939\|GOS2225_1012387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia	943	Open in IMG/M
3300001939\|GOS2225_1018863	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Balneicellaceae → Balneicella → Balneicella halophila	969	Open in IMG/M
3300001950\|GOS2227_1043664	Not Available	1235	Open in IMG/M
3300001966\|GOS2245_1094141	Not Available	944	Open in IMG/M
3300003474\|NAP4_1044395	Not Available	866	Open in IMG/M
3300003477\|nap3_10124589	Not Available	620	Open in IMG/M
3300005510\|Ga0066825_10207294	Not Available	722	Open in IMG/M
3300005837\|Ga0078893_10211068	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300006027\|Ga0075462_10223661	Not Available	562	Open in IMG/M
3300006615\|Ga0101438_116485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	4950	Open in IMG/M
3300006621\|Ga0101441_113176	All Organisms → cellular organisms → Bacteria	3136	Open in IMG/M
3300006622\|Ga0101442_115036	All Organisms → cellular organisms → Bacteria	3782	Open in IMG/M
3300006793\|Ga0098055_1278750	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006867\|Ga0075476_10316549	Not Available	545	Open in IMG/M
3300007236\|Ga0075463_10276381	Not Available	539	Open in IMG/M
3300008012\|Ga0075480_10150346	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300009001\|Ga0102963_1276794	Not Available	662	Open in IMG/M
3300009076\|Ga0115550_1075037	Not Available	1304	Open in IMG/M
3300009076\|Ga0115550_1177721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	728	Open in IMG/M
3300009495\|Ga0115571_1321144	Not Available	614	Open in IMG/M
3300012936\|Ga0163109_10929046	Not Available	636	Open in IMG/M
3300016791\|Ga0182095_1878644	Not Available	509	Open in IMG/M
3300017818\|Ga0181565_10316585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	1044	Open in IMG/M
3300017824\|Ga0181552_10221495	Not Available	966	Open in IMG/M
3300017824\|Ga0181552_10225363	Not Available	955	Open in IMG/M
3300017824\|Ga0181552_10389746	Not Available	669	Open in IMG/M
3300017824\|Ga0181552_10433439	Not Available	625	Open in IMG/M
3300017824\|Ga0181552_10439762	Not Available	620	Open in IMG/M
3300017950\|Ga0181607_10093199	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300017950\|Ga0181607_10325953	Not Available	856	Open in IMG/M
3300017950\|Ga0181607_10436706	Not Available	708	Open in IMG/M
3300017950\|Ga0181607_10724673	Not Available	515	Open in IMG/M
3300017952\|Ga0181583_10703137	Not Available	600	Open in IMG/M
3300017956\|Ga0181580_10274960	Not Available	1155	Open in IMG/M
3300017956\|Ga0181580_10300121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	1094	Open in IMG/M
3300017956\|Ga0181580_10931251	Not Available	541	Open in IMG/M
3300017956\|Ga0181580_10971478	Not Available	527	Open in IMG/M
3300017962\|Ga0181581_10341586	Not Available	953	Open in IMG/M
3300017969\|Ga0181585_10219909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus → Candidatus Methylopumilus universalis	1353	Open in IMG/M
3300017969\|Ga0181585_10307161	Not Available	1103	Open in IMG/M
3300017969\|Ga0181585_10452699	Not Available	868	Open in IMG/M
3300017985\|Ga0181576_10280836	Not Available	1065	Open in IMG/M
3300018036\|Ga0181600_10055881	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300018036\|Ga0181600_10186283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86B	1120	Open in IMG/M
3300018036\|Ga0181600_10521456	Not Available	562	Open in IMG/M
3300018041\|Ga0181601_10085685	Not Available	2083	Open in IMG/M
3300018041\|Ga0181601_10102027	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300018041\|Ga0181601_10671231	Not Available	525	Open in IMG/M
3300018048\|Ga0181606_10099543	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300018048\|Ga0181606_10255715	Not Available	988	Open in IMG/M
3300018049\|Ga0181572_10427458	Not Available	824	Open in IMG/M
3300018417\|Ga0181558_10295880	Not Available	886	Open in IMG/M
3300018421\|Ga0181592_10447454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	903	Open in IMG/M
3300018426\|Ga0181566_10413376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	958	Open in IMG/M
3300018428\|Ga0181568_10246007	Not Available	1470	Open in IMG/M
3300018428\|Ga0181568_10322083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → Candidatus Methylopumilus → Candidatus Methylopumilus universalis	1257	Open in IMG/M
3300018428\|Ga0181568_10977663	Not Available	645	Open in IMG/M
3300018876\|Ga0181564_10106386	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300019459\|Ga0181562_10296779	Not Available	806	Open in IMG/M
3300019459\|Ga0181562_10336686	Not Available	741	Open in IMG/M
3300020051\|Ga0181555_1244404	Not Available	658	Open in IMG/M
3300020165\|Ga0206125_10036372	All Organisms → Viruses → Predicted Viral	2583	Open in IMG/M
3300020166\|Ga0206128_1014872	All Organisms → Viruses → Predicted Viral	4693	Open in IMG/M
3300020166\|Ga0206128_1125566	Not Available	1069	Open in IMG/M
3300020173\|Ga0181602_10044632	Not Available	2455	Open in IMG/M
3300020175\|Ga0206124_10257990	Not Available	674	Open in IMG/M
3300020178\|Ga0181599_1219963	Not Available	749	Open in IMG/M
3300020185\|Ga0206131_10026247	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4559	Open in IMG/M
3300020191\|Ga0181604_10011336	All Organisms → cellular organisms → Bacteria	6505	Open in IMG/M
3300020191\|Ga0181604_10206731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	948	Open in IMG/M
3300020191\|Ga0181604_10272842	Not Available	781	Open in IMG/M
3300020379\|Ga0211652_10047916	Not Available	1281	Open in IMG/M
3300020421\|Ga0211653_10070579	Not Available	1565	Open in IMG/M
3300020431\|Ga0211554_10026223	Not Available	3415	Open in IMG/M
3300020452\|Ga0211545_10011748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4581	Open in IMG/M
3300020469\|Ga0211577_10792115	Not Available	547	Open in IMG/M
3300021373\|Ga0213865_10008448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5987	Open in IMG/M
3300021373\|Ga0213865_10022788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3535	Open in IMG/M
3300021373\|Ga0213865_10151269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1189	Open in IMG/M
3300021373\|Ga0213865_10164011	Not Available	1128	Open in IMG/M
3300021373\|Ga0213865_10327817	Not Available	703	Open in IMG/M
3300021373\|Ga0213865_10380979	Not Available	632	Open in IMG/M
3300021378\|Ga0213861_10330709	Not Available	772	Open in IMG/M
3300021389\|Ga0213868_10725383	Not Available	504	Open in IMG/M
3300021958\|Ga0222718_10084681	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300021964\|Ga0222719_10110803	Not Available	1992	Open in IMG/M
3300022927\|Ga0255769_10176466	Not Available	970	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10022924	All Organisms → cellular organisms → Bacteria	4488	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10259521	Not Available	826	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10272079	Not Available	798	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10284912	Not Available	772	Open in IMG/M
3300023273\|Ga0255763_1033071	All Organisms → cellular organisms → Bacteria	2822	Open in IMG/M
3300025621\|Ga0209504_1020573	All Organisms → cellular organisms → Bacteria	2532	Open in IMG/M
3300025621\|Ga0209504_1167624	Not Available	510	Open in IMG/M
3300025860\|Ga0209119_1261648	Not Available	634	Open in IMG/M
3300025874\|Ga0209533_1061475	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300025897\|Ga0209425_10253064	Not Available	907	Open in IMG/M
3300028287\|Ga0257126_1019228	All Organisms → cellular organisms → Bacteria	3337	Open in IMG/M
3300031774\|Ga0315331_10239611	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1343	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.15%
Algae	Host-Associated → Algae	0.85%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.29%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.85%
Green Algae	Host-Associated → Algae → Green Algae	0.85%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	49.57%
Coastal	Environmental → Aquatic → Marine → Coastal	15.38%
Pelagic	Environmental → Aquatic → Marine → Pelagic	11.11%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.98%
Inlet	Environmental → Aquatic → Marine → Inlet	5.13%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.27%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.85%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.85%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	44.44%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.38%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.98%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	3.42%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.85%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.85%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	44.44%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	7.69%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	5.98%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	5.13%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	5.13%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.27%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.27%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.27%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.27%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	3.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.56%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.71%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	1.71%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.85%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.85%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.85%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.85%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.85%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300001778	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3g	Environmental	Open in IMG/M
3300001939	Marine microbial communities from Block Island, New York, USA - GS009	Environmental	Open in IMG/M
3300001940	Marine microbial communities from Bay of Fundy, Nova Scotia, Canada - GS006	Environmental	Open in IMG/M
3300001950	Marine microbial communities from Delaware Bay, New Jersey, USA - GS011	Environmental	Open in IMG/M
3300001966	Marine microbial communities from Roca Redonda, Equador - GS030	Environmental	Open in IMG/M
3300003474	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4	Environmental	Open in IMG/M
3300003477	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3	Environmental	Open in IMG/M
3300005510	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006615	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ04 time point	Environmental	Open in IMG/M
3300006621	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ07 time point	Environmental	Open in IMG/M
3300006622	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ08 time point	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300025621	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY93_101022023	3300000973	Macroalgal Surface	MKNRIFPPNKKIFPKKICPKHLKTLIPCIEQNPQGCITPHPNPGVHVIYMCPDCWEDRQDLKKKSGFRW*
JGI20154J14316_100519652	3300001348	Pelagic Marine	MKNRIFPPNKKIFPKKICPKHLKTLIPCIEKNFQGCITPHPNPGVHVTYMCPDCWEDRKELKKKSGFRW*
JGI20153J14318_101421931	3300001351	Pelagic Marine	QQLKELKMKNRIFPPNKKIFPKKICPKHLKTLIPCIEKNFQGCITPHPNPGVHVTYMCPDCWEDRKELKKKSGFRW*
ACM18_10861452	3300001778	Marine Plankton	KHNKEVIPCIQENFQGCITPHPNPGVHIIHMCPDCWQEWQEEKRKSPYRY*
GOS2225_10123873	3300001939	Marine	MKNRIFPPKKDLYPNGICPKHLKKLIPCIEEDFYGCVIPYPHPGVHVIYMCPDCWKKRQEMRGLGGTYEK*
GOS2225_10123874	3300001939	Marine	MKNRILPPKKDLYPNGICPKHLKAPIPCILQNFQGRDIKPDLEPGVRVIYMCPDCWKNFQERMKRKIVPPIR
GOS2225_10188632	3300001939	Marine	MKNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVVYMCPNCWEDWQERKKKPGFRW*
GOS2222_10151325	3300001940	Marine	TVQTGVCPKHLKESIPCIQKNFQGCITPHPNPGVHVVYMCPDCWEDRQKLKKKSGFRW*
GOS2227_10436641	3300001950	Marine	MTNKIFRPKKDYYPNGICPKHLKKLIPCIEKNFQGCITPHPNPGMHVIYMCPDCWADRQELKKKSPYRW*
GOS2245_10941413	3300001966	Marine	MRNRIFPPNKKIFPKKICPKYLKTLIPCIEKNPQGCITPHPNPGVHVIYMCPDCWRGRQELKKKSPYRW*
NAP4_10443952	3300003474	Estuarine	MRNRIFPPNKKIFPKKICSKHLKTLIPCIEKNPQGCITPHPNPGVHVIYMCPDCWRDRQELKKKSPYRW*
nap3_101245891	3300003477	Estuarine	MKNRIFPPNKKIFPKKICPKHLKTLILCIEKNPQGCITPHPNPGVHVVYMCPNCWEDWQERKKKSGFRW*
Ga0066825_102072942	3300005510	Marine	LVSKVLKLLVVVKMANKIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW*
Ga0078893_102110684	3300005837	Marine Surface Water	MKNRIFPLEKYLYPNGICSKHLKKVIPYIQKNFQGCITPHPNPGVHVVYMCPDCWEERQEKKKKSGFRW*
Ga0075462_102236612	3300006027	Aqueous	MRNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVIYMCPDCWRDRQELKKKSPYRR*
Ga0101438_1164859	3300006615	Marine Surface Water	MKNRIFPPKKDLYPDGICPKHLKKLIPCIVQNFQGCISPHPNPGVHVIYKCPDCWNNLQEVRRGKSVPPIR*
Ga0101441_1131768	3300006621	Marine Surface Water	MKNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVVYMCPNCWEDWQERKKKSGFRW*
Ga0101442_1150363	3300006622	Marine Surface Water	MRNRILPPNKKIFPKKICPKHLKTLIPCIEQNPQGCITPHPNPGVHVIYMCPDCWEDRQDLKKKSGFRW*
Ga0098055_12787503	3300006793	Marine	MKNRIFPLEKYLYPNGICSKHLKKVIPYIQKNFQGCITPHANPGVHVVYMCPDCWEERQEKKNKSGFRW*
Ga0075476_103165491	3300006867	Aqueous	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW*
Ga0075476_103471602	3300006867	Aqueous	MKNKTYTLQTGVCPKHLKESIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQKLKKKSGFRW*
Ga0075463_102763811	3300007236	Aqueous	VKMANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW*
Ga0075480_101503463	3300008012	Aqueous	MRNRILPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVVWMCPVCWEDWQERKRK
Ga0102963_12767942	3300009001	Pond Water	MANKIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPNCWEDRQELKKKSGFRW*
Ga0115550_10750373	3300009076	Pelagic Marine	MKNKIFPLEKYLYPSGICSKHLKKVIPCIEKNFQGCITPHPNPGVHVVYMCPDCWESRQELKKKSGFRW*
Ga0115550_11777212	3300009076	Pelagic Marine	MKNSIFPPERYLYPNGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWKERQEMKRKSRYRW*
Ga0115565_104908201	3300009467	Pelagic Marine	EVVIMKNKTYTLQTGVCPKHLKESIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQKLKKKSGFRW*
Ga0115571_13211442	3300009495	Pelagic Marine	MKNRIFPLERYLYPNGICPKHLKKVIPCIEKNFQGCITPHPNPGVHVVYTCPDCWEDRQELKNKSGFRW*
Ga0163109_109290461	3300012936	Surface Seawater	MKNRIFPLERYLYPNGICSKHLKKVIPCIEKNFQGCITPHPNPGVHVVYMCPDCWEDRQDLKKKSGFRW*
Ga0182095_18786441	3300016791	Salt Marsh	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGFRW
Ga0181565_103165854	3300017818	Salt Marsh	LYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0181552_102214953	3300017824	Salt Marsh	MVKMANRIHPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0181552_102253632	3300017824	Salt Marsh	MTNKIYPPEKYLYPKGICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGYRWXYEL
Ga0181552_103897461	3300017824	Salt Marsh	MKNRIFPLERYLYPNGICPKHLKKVIPCIERNPQGCITPHPNPGVHVIYMCPNCWEDRQELKKRSPYRW
Ga0181552_104334392	3300017824	Salt Marsh	MKNRIFPPNQKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVIYMCPDCWRDRQELKKKSPYRW
Ga0181552_104397622	3300017824	Salt Marsh	MKNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVVYMCPNCWEDWQERKKKSGFRW
Ga0181607_100931994	3300017950	Salt Marsh	MVEKMRNKIFPPEKYLYPKGVCPKHLKKLIPCIQQNFQGCITPHLNPGVHVVYMCPDCWEDRQKLKNKSGFRW
Ga0181607_103259532	3300017950	Salt Marsh	MKNKIYPPEKYLYPKGICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQKLKKKSGYRW
Ga0181607_104367062	3300017950	Salt Marsh	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPECWEDRQELKKKSGFRW
Ga0181607_107246731	3300017950	Salt Marsh	LYPKGICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGYRW
Ga0181583_107031372	3300017952	Salt Marsh	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWRDRQELKKKSPYRW
Ga0181580_102749602	3300017956	Salt Marsh	VKNKIYPPEKYLYPKRICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQKLKKKSGYRW
Ga0181580_103001213	3300017956	Salt Marsh	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0181580_109312512	3300017956	Salt Marsh	MANRIYPPEKYLYPKGVCPKHLKKLIPCIQQNFQGCITPHLNPGVHVVYMCPDCWEDRQKLKN
Ga0181580_109714782	3300017956	Salt Marsh	MKNRIFPLERYLYPNDICSKHLKKVIPCIEKNFQGCITPHPNPGVHVVYMCPDCWKDRQELKKKYGFRW
Ga0181581_103415861	3300017962	Salt Marsh	MKNRIFPLERYLYPNGICPKHLKKVIPCIEKNFQGCITPHPNPGVHVVYMCPDCWENRQKLKKKSGFRW
Ga0181581_104912021	3300017962	Salt Marsh	KHLKKVIPCIEKNFQGCITPHPNPGVHVVYMCADCWEDRQELKKKSGFRW
Ga0181585_102199094	3300017969	Salt Marsh	MTNKIYPPEKYLYPNGICSKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGYRW
Ga0181585_103071612	3300017969	Salt Marsh	MKNRIFPLERYLYPNDICSKHLKKVIPCIEKNFQGCITPHPNPGVHVVYMCPDCWKDRQELKKKSGFRW
Ga0181585_104526992	3300017969	Salt Marsh	MKNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVIYMCPDCWRDRQELKKKSPYRW
Ga0181576_102808364	3300017985	Salt Marsh	MKNKIYPPEKYLYPKRICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWKERQELKKKSGYRW
Ga0181600_100558818	3300018036	Salt Marsh	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQESKKKSGFRW
Ga0181600_101862831	3300018036	Salt Marsh	VVKMKNRTFPPNKKILPKKICSKHLKALIPCIQRNPQGCITPHPNPGVHVIYMCPDCWEDQQELKKKSLYRW
Ga0181600_105214561	3300018036	Salt Marsh	MANRIHPPEKYLYPKGICPKHLKKLIPCIEMNFQGCITPHPNPGVHVVYMCPNCWEDRQELK
Ga0181601_100856852	3300018041	Salt Marsh	MKNRTFPPNKKILPKKICSKHLKALIPCIQRNPQGCITPHPNPGVHVIYMCPDCWEDQQELKKKSLYRW
Ga0181601_101020272	3300018041	Salt Marsh	MANRIYPPEKYLYPKGICPKHLKKFIPCIEKNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGFRW
Ga0181601_106712313	3300018041	Salt Marsh	MTNKIYPPEKYLYPKGICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQ
Ga0181606_100995434	3300018048	Salt Marsh	MKNRIFPLEKYLYPNGICSKHLKKLIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQQLKNKSGFRW
Ga0181606_102557152	3300018048	Salt Marsh	MKNKIYPPEKYLYPKRICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGYRW
Ga0181572_104274582	3300018049	Salt Marsh	VKNKIYPPEKYLYPKRICPKHLKKIIPCIQQNFQGCITPHPNPGVQVVYMCPDCWEDRQELKKKSGYRW
Ga0181572_104383521	3300018049	Salt Marsh	GICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0181558_102958802	3300018417	Salt Marsh	MRNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVIYMCPDCWRDRQELKKKSPYRW
Ga0181592_104474544	3300018421	Salt Marsh	MTNKIYPPEKYLYPKGICPKHLKKIIPCIQQNFQGCIEPHPNPGVHVVMMCPSCWQEWQEEKRKSPYRW
Ga0181566_104133764	3300018426	Salt Marsh	MKNRTFPPNKKILPKKICSKHLKALIPCIERNPQGCITPHPNPGVHVIYMCPDCWEDQQ
Ga0181566_105175924	3300018426	Salt Marsh	KHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGYRW
Ga0181568_102460071	3300018428	Salt Marsh	PNTLNNKVLRFQKVVKMKNKIYPPEKYLYPKRICPKHLKKIIPCIQKNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSGYRW
Ga0181568_103220834	3300018428	Salt Marsh	VKNKIYPPEKYLYPKGICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWKERQELKK
Ga0181568_109776632	3300018428	Salt Marsh	MKNRIFPPERYLYPNGICPKHLKKVIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0181564_101063861	3300018876	Salt Marsh	MKNKIYPPEKYLYPKGICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWKERQELKKKSG
Ga0181564_105228182	3300018876	Salt Marsh	ICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKIGYRW
Ga0181562_102967792	3300019459	Salt Marsh	MRNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVVYMCPNCWEDWQERKKKSGFRW
Ga0181562_103366861	3300019459	Salt Marsh	VVKMKNRIFPLEKYLYPNGICPKHLKKVIPCIERNPQGCITPHPNPGVHVIYMCPDCWRDRQELKKKSPYRW
Ga0181555_12444042	3300020051	Salt Marsh	MRNRIFPPNKKLFPKKICPKHLKTLIPCIERNPQGCITPHPNPGVHVIFMCPDCWEDRQELKKKSPYRW
Ga0206125_100363724	3300020165	Seawater	MRDRIFPPNKKIFPKKICPKHLKTLIPCIKKNPQGCITPHPNPEVHVIYMCPDCWRDRQELKKKSPYRW
Ga0206125_100590083	3300020165	Seawater	MKNKTYILQTGVCPKHLKESIPCIQQNFQGCITPHPNPGVHVIYMCPDCWEDRQKLKKKSGFRW
Ga0206128_10148729	3300020166	Seawater	MKNKIFPLEKYLYPSGICSKHLKKVIPCIEKNFQGCITPHPNPGVHVVYMCPDCWESRQELKKKSGFRW
Ga0206128_11255662	3300020166	Seawater	MKNRIFPPEKYLYPKGICPKHLKKLIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQELKNKSGFRW
Ga0181602_100446324	3300020173	Salt Marsh	LVSKVLELLVVVKMANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPECWEDRQELKKKSGFRW
Ga0206124_102579902	3300020175	Seawater	MANRIYPPEKYLYPKGICSKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPNCWEDRQELKKKSGFRW
Ga0181599_12199632	3300020178	Salt Marsh	MANRIHPPEKYLYPKGICPKHLKKLIPCIEMNFQGCITPHPNPGVHVVYMCPNCWEDRQELKKKSGFRW
Ga0206131_100262474	3300020185	Seawater	MKNRIFPLEKYLYPNGICSKHLKKVIPYIQKNFQGCITPHPNPGVHVVYMCPDCWEERQEKKKKSGFRW
Ga0206131_100342651	3300020185	Seawater	MKNKICKLHLKKLIPCIQENFQGCIVPHPNPGTHVVYMCPVCWKEWQERKRKSPYRW
Ga0181605_101855324	3300020188	Salt Marsh	CPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0181604_100113361	3300020191	Salt Marsh	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQESKKKS
Ga0181604_102067312	3300020191	Salt Marsh	MANRICPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPECWEDRQELKKKSGFRW
Ga0181604_102728423	3300020191	Salt Marsh	LIVVIKMANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0211652_100479164	3300020379	Marine	MRNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVIYMRLDCWRDRQELKKKSPYRW
Ga0211653_100705793	3300020421	Marine	MRNRIFPPNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVIYMCLDCWRDRQELKKKSPYRW
Ga0211554_100262235	3300020431	Marine	MKNRIFPRERYLYPNGICPKHLKKVIPCIQKNFQGCITPHPNPGLHVVYMCPDCWEDRQELKKKSGFRW
Ga0211545_100117486	3300020452	Marine	MKNRIFPLNKKIFPKKICPKHLKTLIPCIEKNPQGCITPHPNPGVHVVYMCPDCWEDRQELKKKSPYRW
Ga0211577_107921153	3300020469	Marine	MKNRIFPLERYLYPNGICPKHLKKAIPCIEKNFQGCITPHPNPGVHVVYMCADCWEDQQELKKKSGYR
Ga0213865_100084483	3300021373	Seawater	MTNKIYPPEKYLYPNGICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWKDRQELKKKSGYRW
Ga0213865_100227883	3300021373	Seawater	MKNRIFPPKKDLYPNGICSKHLKAPIPCILQNFQGRDIKPYLKPGVRVIYMCPDCWKNFQNRMKKKIVPPIRKTVT
Ga0213865_101512691	3300021373	Seawater	MKNRIFPLEKYLYPNGICSKHLKKVIPCIQKNFQGCITPHPNPGVHVVYMCPDCWEERQEKKKKSGFRW
Ga0213865_101640113	3300021373	Seawater	MTNRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0213865_103278171	3300021373	Seawater	VEKMKNRTFPPNKKILPKKICSKHLKALIPCIQRNPQGCITPHPNPGVHVIYMCPDCWEDQQELKKKSLYRW
Ga0213865_103809793	3300021373	Seawater	MTNKIYPPEKYLYPKGICPKHLKKIIPCIQQNFQGCITPHPNPGVHVVYMCPDCWEDRQELKKKTGYRW
Ga0213861_103307093	3300021378	Seawater	MKNRIFPLERYLYPNGICSKHLKKVIPCIEKNFQGCISPHPNPGVHVIYMCPDCWEDRQELKKKSGFRW
Ga0213868_105558182	3300021389	Seawater	MKNKTYTLQTGVCPKHLKESIPCIQKNFQGCITPHPNPGVHVVYMCPDCWEDRQKLKKKSGFRW
Ga0213868_107253831	3300021389	Seawater	MKNRIFPPKKDLYPNGNCPKHLKAPIPCILQNFQGRDIKPCLEPWVRVIYMCPDCWKNFQERMKRKIVPPIRKA
Ga0222718_100846812	3300021958	Estuarine Water	MANKIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPNCWEDRQELKKKSGFRW
Ga0222719_101108033	3300021964	Estuarine Water	MKNRILPPNKKIFPKKICPKHLKTLIPCIEQNPQGCITPHPNPGVHVVYMCPDCWRDRQELKKKSAYRW
Ga0255769_101764662	3300022927	Salt Marsh	LIKVLKLKMVEKMRNKIFPPEKYLYPKGVCPKHLKKLIPCIQQNFQGCITPHLNPGVHVVYMCPDCWEDRQKLKNKSGFRW
(restricted) Ga0233432_100229244	3300023109	Seawater	MTNKILPPEKYLYPKGICPKHLKKIIPCIQQNFQGCITPHPNPGMHVVYMCPDCWKDRQELKKKSGYRW
(restricted) Ga0233432_102595211	3300023109	Seawater	LRLKKVVKMKNSIFPPERYLYPNGICPKHLKKLIPCIEKNFQGCITPHLNPGMHVIYMCPDCWKERQEMKRKSRYRW
(restricted) Ga0233432_102720792	3300023109	Seawater	MANRIFRPEKDYYPNGICPRHLKKLIPCIEKNFQGCITPHPNPGMHVIYMCPDCWEDRQELKKKSGFRSXYEI
(restricted) Ga0233432_102849123	3300023109	Seawater	MKNRIFPPEKYLYPKGICPKHLNKLIPCIEKNFQGCITPHPNPGVHVIYMCPNCWEDRQELKKKSGFRW
Ga0255763_10330719	3300023273	Salt Marsh	LIVVVKMANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWEDRQESKKKSGFRW
(restricted) Ga0233444_103502262	3300024264	Seawater	GICPKHLKKIIPCIQQNFQGCITPHPNPGMHVVYMCPDCWKDRQELKKKSGYRW
Ga0209504_10205734	3300025621	Pelagic Marine	MKNRIFPPNKKIFPKKICPKHLKTLIPCIEKNFQGCITPHPNPGVHVTYMCPDCWEDRKELKKKSGFRW
Ga0209504_11676242	3300025621	Pelagic Marine	VKMKNSIFPPERYLYPNGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWKERQEMKRKSRYRW
Ga0209119_12616482	3300025860	Pelagic Marine	QQLKELKMKNRIFPPNKKIFPKKICPKHLKTLIPCIEKNFQGCITPHPNPGVHVTYMCPDCWEDRKELKKKSGFRW
Ga0209533_10614752	3300025874	Pelagic Marine	MKNSIFPPERYLYPNGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVIYMCPDCWKERQEMKRKSRYRW
Ga0209425_102530642	3300025897	Pelagic Marine	MANRIYPPEKYLYPKGICPKHLKKLIPCIEKNFQGCITPHPNPGVHVVYTCPDCWEDRQELKNKSGFRW
Ga0209425_104108871	3300025897	Pelagic Marine	MKNKTYTLQTGVCPKHLKESIPCIQQNFQGCITPHPNPGVHVVYMCPDCWRDRQELKKKSPYRW
Ga0257126_10192285	3300028287	Marine	MKNKTFPLEKYLYPNGICSKHLKKVIPCIQKNFQGCITPHPNPGVHVAYMCPDCWEDRQELKKKSGFRW
Ga0315331_102396113	3300031774	Seawater	MVNKIFPPKKDLYPNGICPKHLKKLIPCIEKNPQGCITPHPNPGVHVVYMCPNCWEDWQERKKKSGFRW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters