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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F076498 |
| Family Type | Metagenome |
| Number of Sequences | 118 |
| Average Sequence Length | 50 residues |
| Representative Sequence | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEH |
| Number of Associated Samples | 110 |
| Number of Associated Scaffolds | 118 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 33.33 % |
| % of genes near scaffold ends (potentially truncated) | 11.86 % |
| % of genes from short scaffolds (< 2000 bps) | 11.86 % |
| Associated GOLD sequencing projects | 105 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (93.220 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (17.797 % of family members) |
| Environment Ontology (ENVO) | Unclassified (76.271 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (88.983 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 21.15% β-sheet: 25.00% Coil/Unstructured: 53.85% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 118 Family Scaffolds |
|---|---|---|
| PF11753 | DUF3310 | 57.63 |
| PF13759 | 2OG-FeII_Oxy_5 | 29.66 |
| PF00565 | SNase | 0.85 |
| PF06945 | DUF1289 | 0.85 |
| PF12838 | Fer4_7 | 0.85 |
| COG ID | Name | Functional Category | % Frequency in 118 Family Scaffolds |
|---|---|---|---|
| COG3313 | Predicted Fe-S protein YdhL, DUF1289 family | General function prediction only [R] | 0.85 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 93.22 % |
| All Organisms | root | All Organisms | 6.78 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300002754|JGI24928J39210_1014982 | Not Available | 566 | Open in IMG/M |
| 3300005837|Ga0078893_10191961 | All Organisms → Viruses → Predicted Viral | 1468 | Open in IMG/M |
| 3300006166|Ga0066836_10303541 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M | 957 | Open in IMG/M |
| 3300007276|Ga0070747_1055182 | All Organisms → Viruses → Predicted Viral | 1517 | Open in IMG/M |
| 3300010153|Ga0098059_1414091 | Not Available | 508 | Open in IMG/M |
| 3300020388|Ga0211678_10186454 | Not Available | 875 | Open in IMG/M |
| 3300021375|Ga0213869_10197025 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp. | 910 | Open in IMG/M |
| 3300021375|Ga0213869_10470775 | Not Available | 502 | Open in IMG/M |
| (restricted) 3300024062|Ga0255039_10170067 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M | 901 | Open in IMG/M |
| 3300025099|Ga0208669_1056124 | Not Available | 888 | Open in IMG/M |
| 3300025832|Ga0209307_1098946 | Not Available | 938 | Open in IMG/M |
| 3300025874|Ga0209533_1150410 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M | 1046 | Open in IMG/M |
| 3300027186|Ga0208797_1026358 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M | 767 | Open in IMG/M |
| 3300028136|Ga0228608_1079285 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → unclassified Maricaulis → Maricaulis sp. | 932 | Open in IMG/M |
| 3300029448|Ga0183755_1022710 | Not Available | 2024 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 17.80% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 13.56% |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 12.71% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 9.32% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 7.63% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 7.63% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 5.93% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 5.08% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 3.39% |
| Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 3.39% |
| Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 3.39% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 2.54% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 1.69% |
| Marine | Environmental → Aquatic → Marine → Inlet → Unclassified → Marine | 1.69% |
| Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.85% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.85% |
| Marine Surface Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water | 0.85% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 0.85% |
| Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 0.85% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000150 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 48 08/11/10 120m | Environmental | Open in IMG/M |
| 3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
| 3300001589 | Marine viral communities from the Pacific Ocean - LP-40 | Environmental | Open in IMG/M |
| 3300002754 | Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_35 | Environmental | Open in IMG/M |
| 3300003500 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA | Environmental | Open in IMG/M |
| 3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
| 3300005837 | Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18 | Environmental | Open in IMG/M |
| 3300006164 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA | Environmental | Open in IMG/M |
| 3300006166 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 | Environmental | Open in IMG/M |
| 3300006928 | Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG | Environmental | Open in IMG/M |
| 3300006947 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA | Environmental | Open in IMG/M |
| 3300007276 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 | Environmental | Open in IMG/M |
| 3300007552 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571 | Environmental | Open in IMG/M |
| 3300007655 | Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579 | Environmental | Open in IMG/M |
| 3300007692 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743 | Environmental | Open in IMG/M |
| 3300007708 | Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 | Environmental | Open in IMG/M |
| 3300007715 | Estuarine microbial communities from the Columbia River estuary - metaG S.751 | Environmental | Open in IMG/M |
| 3300007718 | Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3 | Environmental | Open in IMG/M |
| 3300009003 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725 | Environmental | Open in IMG/M |
| 3300009024 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 | Environmental | Open in IMG/M |
| 3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
| 3300009172 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 | Environmental | Open in IMG/M |
| 3300009409 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 | Environmental | Open in IMG/M |
| 3300009426 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 | Environmental | Open in IMG/M |
| 3300009435 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 | Environmental | Open in IMG/M |
| 3300009496 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 | Environmental | Open in IMG/M |
| 3300009498 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 | Environmental | Open in IMG/M |
| 3300009507 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 | Environmental | Open in IMG/M |
| 3300009705 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 | Environmental | Open in IMG/M |
| 3300010149 | Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG | Environmental | Open in IMG/M |
| 3300010153 | Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG | Environmental | Open in IMG/M |
| 3300010883 | western Arctic Ocean co-assembly | Environmental | Open in IMG/M |
| 3300011258 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate | Environmental | Open in IMG/M |
| 3300017709 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27 | Environmental | Open in IMG/M |
| 3300017710 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28 | Environmental | Open in IMG/M |
| 3300017713 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 | Environmental | Open in IMG/M |
| 3300017739 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 | Environmental | Open in IMG/M |
| 3300017741 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19 | Environmental | Open in IMG/M |
| 3300017744 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23 | Environmental | Open in IMG/M |
| 3300017746 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 | Environmental | Open in IMG/M |
| 3300017752 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22 | Environmental | Open in IMG/M |
| 3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
| 3300017759 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 | Environmental | Open in IMG/M |
| 3300017767 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20 | Environmental | Open in IMG/M |
| 3300017779 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16 | Environmental | Open in IMG/M |
| 3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
| 3300017783 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10 | Environmental | Open in IMG/M |
| 3300017786 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18 | Environmental | Open in IMG/M |
| 3300020182 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2 | Environmental | Open in IMG/M |
| 3300020253 | Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX555982-ERR598945) | Environmental | Open in IMG/M |
| 3300020372 | Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090) | Environmental | Open in IMG/M |
| 3300020388 | Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064) | Environmental | Open in IMG/M |
| 3300020425 | Marine microbial communities from Tara Oceans - TARA_B100001765 (ERX556083-ERR598964) | Environmental | Open in IMG/M |
| 3300020438 | Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942) | Environmental | Open in IMG/M |
| 3300021068 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015 | Environmental | Open in IMG/M |
| 3300021085 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 | Environmental | Open in IMG/M |
| 3300021371 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497 | Environmental | Open in IMG/M |
| 3300021375 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132 | Environmental | Open in IMG/M |
| 3300021378 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131 | Environmental | Open in IMG/M |
| 3300021958 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D | Environmental | Open in IMG/M |
| 3300024062 (restricted) | Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1 | Environmental | Open in IMG/M |
| 3300024316 | Seawater microbial communities from Monterey Bay, California, United States - 66D | Environmental | Open in IMG/M |
| 3300024327 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_120_MG | Environmental | Open in IMG/M |
| 3300025099 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
| 3300025508 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025577 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes) | Environmental | Open in IMG/M |
| 3300025592 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025623 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025637 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes) | Environmental | Open in IMG/M |
| 3300025652 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes) | Environmental | Open in IMG/M |
| 3300025666 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes) | Environmental | Open in IMG/M |
| 3300025667 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025676 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025699 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes) | Environmental | Open in IMG/M |
| 3300025722 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025809 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes) | Environmental | Open in IMG/M |
| 3300025822 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes) | Environmental | Open in IMG/M |
| 3300025832 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes) | Environmental | Open in IMG/M |
| 3300025849 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes) | Environmental | Open in IMG/M |
| 3300025860 | Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes) | Environmental | Open in IMG/M |
| 3300025874 | Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes) | Environmental | Open in IMG/M |
| 3300025876 | Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes) | Environmental | Open in IMG/M |
| 3300025881 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes) | Environmental | Open in IMG/M |
| 3300025887 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027159 | Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573 (SPAdes) | Environmental | Open in IMG/M |
| 3300027186 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 (SPAdes) | Environmental | Open in IMG/M |
| 3300027206 | Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02 (SPAdes) | Environmental | Open in IMG/M |
| 3300027406 | Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_07_M0_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300027702 | Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - DCM_A/KNORR_S2/LV (SPAdes) | Environmental | Open in IMG/M |
| 3300027780 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes) | Environmental | Open in IMG/M |
| 3300027788 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes) | Environmental | Open in IMG/M |
| 3300027813 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes) | Environmental | Open in IMG/M |
| 3300027827 | Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes) | Environmental | Open in IMG/M |
| 3300027839 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes) | Environmental | Open in IMG/M |
| 3300028136 | Seawater microbial communities from Monterey Bay, California, United States - 9D | Environmental | Open in IMG/M |
| 3300028194 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m | Environmental | Open in IMG/M |
| 3300028195 | Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_200 | Environmental | Open in IMG/M |
| 3300028197 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m | Environmental | Open in IMG/M |
| 3300028287 | Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m | Environmental | Open in IMG/M |
| 3300028391 | Seawater microbial communities from Monterey Bay, California, United States - 24D | Environmental | Open in IMG/M |
| 3300029448 | Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082 | Environmental | Open in IMG/M |
| 3300031519 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2 | Environmental | Open in IMG/M |
| 3300031644 | Marine microbial communities from water near the shore, Antarctic Ocean - #5 | Environmental | Open in IMG/M |
| 3300031687 | Marine microbial communities from water near the shore, Antarctic Ocean - #125 | Environmental | Open in IMG/M |
| 3300031688 | Marine microbial communities from water near the shore, Antarctic Ocean - #177 | Environmental | Open in IMG/M |
| 3300031773 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915 | Environmental | Open in IMG/M |
| 3300031775 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315 | Environmental | Open in IMG/M |
| 3300031851 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515 | Environmental | Open in IMG/M |
| 3300032032 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| SI48aug10_120mDRAFT_10339351 | 3300000150 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYKGKTVHEIDV |
| JGI24006J15134_101221683 | 3300001450 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSKMTYDMWLRNYKGRTVKDIDVNEHTKWS |
| JGI24005J15628_100673551 | 3300001589 | Marine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYK |
| JGI24005J15628_101789731 | 3300001589 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSKMTYDMWLRNYKGRTVKDIDVNEHTKW |
| JGI24928J39210_10149823 | 3300002754 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYKGKT |
| JGI26242J51144_10547501 | 3300003500 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYK |
| Ga0055584_1015489982 | 3300004097 | Pelagic Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFSYNDWLVKYKGKTVHEIDV |
| Ga0078893_101919613 | 3300005837 | Marine Surface Water | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLVR |
| Ga0075441_102795442 | 3300006164 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSRITYNDWLVRYKDRTVQSIDVNEHTKWAREYQ |
| Ga0066836_103035414 | 3300006166 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFSYNDWLVKYKGKTVHEIDVIEHSKWSKQY |
| Ga0098041_12841923 | 3300006928 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLVRYKGKTVHEIDVNEH |
| Ga0075444_101497253 | 3300006947 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSRITYNDWLVRYKDRTVQSIDVNEHTKWAREYQAWRV |
| Ga0070747_10551827 | 3300007276 | Aqueous | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKE |
| Ga0102818_10978921 | 3300007552 | Estuarine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEIDVNEHTKW |
| Ga0102825_11210021 | 3300007655 | Estuarine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDW |
| Ga0102823_10363731 | 3300007692 | Estuarine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEIDVNEHTKWA |
| Ga0102859_10863404 | 3300007708 | Estuarine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKT |
| Ga0102827_11356001 | 3300007715 | Estuarine | MYKQISENEFNKLLNSYEQGGTYQKKKSRITYNDWLVKYKGKTVHEIDVNEHTKWSKEYQ |
| Ga0102852_10178795 | 3300007718 | Estuarine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLIRYKGKTVHEIDVNEHTKWAKEY |
| Ga0102813_11302611 | 3300009003 | Estuarine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDW |
| Ga0102811_10923345 | 3300009024 | Estuarine | MYKQISENEFNKLLSSYEQGGTYQKKKSSITYNDWLVR |
| Ga0115566_107421603 | 3300009071 | Pelagic Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVRYKGKTV |
| Ga0114995_102884181 | 3300009172 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSKMTYDMWLRNYKGRTVKDID |
| Ga0114993_108399811 | 3300009409 | Marine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWL |
| Ga0114993_111024993 | 3300009409 | Marine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTV |
| Ga0115547_101539610 | 3300009426 | Pelagic Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEIDVNE |
| Ga0115546_10540086 | 3300009435 | Pelagic Marine | MYKQISENEFNELLNSYEQGGTYQKKKSNFTYNDWLVRYKGKTVHEIDVNEHTKWSKEY |
| Ga0115570_101021956 | 3300009496 | Pelagic Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEIDVNEHTKWSK |
| Ga0115568_103762801 | 3300009498 | Pelagic Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEIDVNEHTKW |
| Ga0115572_105449362 | 3300009507 | Pelagic Marine | MYKQISEDEFNKLLNSYEQGGTYQKKKSTFTYNDWLIKYKGKTVHEIDVIEHSKWSKQYQ |
| Ga0115000_107347642 | 3300009705 | Marine | MYKQINENEFNKLLNSYEQGGTYQKKKSKMTYDMWLRNYKGRTVKDIDVNEHTKW |
| Ga0098049_10818553 | 3300010149 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFSYNDWLV |
| Ga0098059_13139441 | 3300010153 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSFTYNDWLIKYKGKTVHEIDV |
| Ga0098059_14140913 | 3300010153 | Marine | MYKQISENKFNKLLDSYEQGGTYQKKKSSFTYNDWLVRYKGKTVHEIDVNEHTKW |
| Ga0133547_114882573 | 3300010883 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLMRYKGKTVHEIDVNEHTKWAKEYQ |
| Ga0151677_11284663 | 3300011258 | Marine | MYKQISENEFNKLLNSHEQGGTYQKKKSSITYNDWLVKDKGKTVKEIDVNEHTKWSKKFQAWRVR |
| Ga0181387_11033033 | 3300017709 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEIDVNEHTKWSK |
| Ga0181403_10559771 | 3300017710 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSNFTYNDWL |
| Ga0181391_11114571 | 3300017713 | Seawater | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEID |
| Ga0181433_11074503 | 3300017739 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEH |
| Ga0181421_11331141 | 3300017741 | Seawater | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNE |
| Ga0181397_11388761 | 3300017744 | Seawater | MYKQISEDEFNKLLNSYEQGGTYQKKKSTFTYNDWLIKYKGKTVHEIDVIEH |
| Ga0181389_11137263 | 3300017746 | Seawater | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTKWAKE |
| Ga0181400_11272023 | 3300017752 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSNFTYNDWLVRYKGKTVHEIDVNEHTKWSKE |
| Ga0181407_11489903 | 3300017753 | Seawater | MYKQISENEFNKLLNEYQQGGTYQKKESMIAKDKM |
| Ga0181414_10728381 | 3300017759 | Seawater | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEH |
| Ga0181406_11174724 | 3300017767 | Seawater | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYKGKTVHEIDVI |
| Ga0181395_10102897 | 3300017779 | Seawater | MYKQISENEFNKLLNEYQQGGTYQKKESMIAKDKMKFTYDLWLQKYKGKTVHDITVEEH |
| Ga0181380_12502142 | 3300017782 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSRITYNDWLVKYKG |
| Ga0181379_12745093 | 3300017783 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSNFTYNDWLV |
| Ga0181424_100533997 | 3300017786 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVK |
| Ga0206129_101804671 | 3300020182 | Seawater | MYKQISENEFNKLLSSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEIDVNEHTKWSKEYQ |
| Ga0211685_10284422 | 3300020253 | Marine | MYKQISKNEFNKLLDSYEQGGTYQKKKSKMTYDMWLQR |
| Ga0211683_101121192 | 3300020372 | Marine | MYKQISKNEFNKLLDSYEQGGTYQKKKSKMTYDMWLRNYKGRTVKDIDVNEHTKWSRD |
| Ga0211678_101864541 | 3300020388 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLVRYKGKTV |
| Ga0211678_101907881 | 3300020388 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYKGKTVHEIDVIEHSK |
| Ga0211549_104261001 | 3300020425 | Marine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTKWAKEFQ |
| Ga0211576_104147302 | 3300020438 | Marine | MYKQISEDEFNKLLNSYEQGGTYQKKKSTFTYNDWLIKY |
| Ga0206684_10940581 | 3300021068 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSSFTYNDWLIKYKGKTV |
| Ga0206677_102408024 | 3300021085 | Seawater | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLI |
| Ga0213863_101907924 | 3300021371 | Seawater | MYKQISENEFNKLLDSYEQGGTYQKKKSSFSYNDWLVKYKGKTVHEIDVNEHSKW |
| Ga0213869_101970253 | 3300021375 | Seawater | MYKQISEDEFNKLLNSYEQGGTYQKKKSTFTYNDWLIKYK |
| Ga0213869_104707753 | 3300021375 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSEVTYNDWLMKYKGKTVHEID |
| Ga0213861_101890081 | 3300021378 | Seawater | MYKQISENEFNKLLSSYEQGGTYQKKKSSITYNDWL |
| Ga0222718_102699542 | 3300021958 | Estuarine Water | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYKGKTVHEIDVIEHSKWSTQYQSWKSG |
| (restricted) Ga0255039_101700671 | 3300024062 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSRITYNDWLVKYKGKTVHEIDVNEH |
| Ga0228654_10507602 | 3300024316 | Seawater | MYKQISEDEFNKLLNSYEQGGTYQKKKSTFTYNDWLIKYKGKTVHEIDVIEHSKWSKQYQSWKIVN |
| (restricted) Ga0233434_10453041 | 3300024327 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTKWAKEF |
| Ga0208669_10561241 | 3300025099 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSFSYNDWLVKYKGKTVHEIDVIEHSKW |
| Ga0209337_11879972 | 3300025168 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSKMTYNDWLVRYKDKTVHDITVEEHAKWSR |
| Ga0208148_10874103 | 3300025508 | Aqueous | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTKWAK |
| Ga0209304_11210791 | 3300025577 | Pelagic Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTKWSREFQ |
| Ga0209658_11271891 | 3300025592 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGK |
| Ga0209041_11146021 | 3300025623 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKT |
| Ga0209197_10615541 | 3300025637 | Pelagic Marine | MYKQISENEFNKLLSSYEQGGTYQKKKSSITYNDWLVRYKGKTVH |
| Ga0208134_10592701 | 3300025652 | Aqueous | MYKQISENEFNKLLNSYEQGGTYQKKKSRITYNDWLVKYKGKT |
| Ga0209601_10454936 | 3300025666 | Pelagic Marine | MYKQISENEFNKLLSSYEQGGTYQKKKSSITYNDWLVRYK |
| Ga0209043_11485771 | 3300025667 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEID |
| Ga0209657_10396458 | 3300025676 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTKWA |
| Ga0209715_10181881 | 3300025699 | Pelagic Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFSYNDWLVKYKGKTVHEIDVIEHSK |
| Ga0209660_11971423 | 3300025722 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSRITYNDWLVKYKGKTV |
| Ga0209199_12874073 | 3300025809 | Pelagic Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVRYKGK |
| Ga0209714_10582765 | 3300025822 | Pelagic Marine | MYKQISENEFNKLLSSYEQGGTYQKKKSSITYNDWLV |
| Ga0209307_10989461 | 3300025832 | Pelagic Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFSYNDWLVKYKGKTVHEIDVIEHSKW |
| Ga0209603_13098121 | 3300025849 | Pelagic Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLVRYKGKT |
| Ga0209119_13339103 | 3300025860 | Pelagic Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSEVTYNDWLMKYKGKTV |
| Ga0209533_11504104 | 3300025874 | Pelagic Marine | MYKQISEKQFNKLLDSYEQGGTYQKKKSSFSYNDWLVKYKGK |
| Ga0209223_101157326 | 3300025876 | Pelagic Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVRYKGKTVKQID |
| Ga0209309_102231341 | 3300025881 | Pelagic Marine | MYKQISENEFNKLLSSYEQGGTYQKKKSSITYNDWLVRYKGKTVHEIDVNEHTKWSK |
| Ga0208544_100872391 | 3300025887 | Aqueous | MYKQISENEFNKLLDSYEQGGTYQKKKSSFSYNDWLVKYKGKTVHEIDVIEHSKWSKQ |
| Ga0208020_10422161 | 3300027159 | Estuarine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTKWAKEFQSWRVG |
| Ga0208797_10263581 | 3300027186 | Estuarine | MYKQISENEFNKLLSSYEQGGTYQKKKSSITYNGWLVRYKGKTVHEIDVNEHTKWSKEYQ |
| Ga0208023_10226521 | 3300027206 | Estuarine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTKWAKEFQAWRV |
| Ga0208965_10476741 | 3300027406 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSNFTYNDWLVRYKGKTVH |
| Ga0209036_11759471 | 3300027702 | Marine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTK |
| Ga0209502_103680371 | 3300027780 | Marine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHT |
| Ga0209711_104170181 | 3300027788 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTK |
| Ga0209090_104424791 | 3300027813 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEID |
| Ga0209035_103042121 | 3300027827 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNDWLI |
| Ga0209403_103029971 | 3300027839 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSKMTYDMWLRNYKGRTVKDIDVNEHTKWSRE |
| Ga0228608_10792851 | 3300028136 | Seawater | MYKQISEDEFNKLLNSYEQGGTYQKKKSTFTYNDWLIKYKGKTVHEIDVIEHSKWSKQY |
| Ga0257106_11622763 | 3300028194 | Marine | QINENEFNKLLNSYEQGGTYQKKKSSITYNDWLVKYKGKTVKEIDVNEHTNWAKEFQAWRVGNIEKV |
| Ga0257125_11607171 | 3300028195 | Marine | MYKQISENEFNKLLNSYEQGGTYQKKKSSFTYNDWLIKYKGKTVHEIDVIEHSKWSTQYQSWKSGNIEKL |
| Ga0257110_11444441 | 3300028197 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSRITYNDWLVRYKGRTVKDIEVNEHTKWSREFQSWRVGNIEKV |
| Ga0257126_11286131 | 3300028287 | Marine | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLVRYKG |
| Ga0233394_10484644 | 3300028391 | Seawater | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYKGKTVH |
| Ga0183755_10227107 | 3300029448 | Marine | MYKQISENKFNKLLDSYEQGGTYQKKKSSFTYNDWLV |
| Ga0307488_101383551 | 3300031519 | Sackhole Brine | MYKQISENEFNKLLDSYEQGGTYQKKKSNFTYNDWLVRYKGKTVHEIDVNEHTKWSKEYQ |
| Ga0307488_103582061 | 3300031519 | Sackhole Brine | MYKQISENEFNKLLDSYEQGGTYQKKKSSITYNDWL |
| Ga0307488_103642651 | 3300031519 | Sackhole Brine | MYKQINENEFNKLLNSYEQGGTYQKKKSSITYNDWLV |
| Ga0307488_103728181 | 3300031519 | Sackhole Brine | MYKQISENEFNKLLDSYEQGGTYQKKKSNFTYNDW |
| Ga0308001_101130233 | 3300031644 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSRITYNDWLVRYKDKTVHDITVEEHAKWSREFQSWRVG |
| Ga0308008_10844411 | 3300031687 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSRITYNDWLVRYKDKTVHDITV |
| Ga0308011_101702491 | 3300031688 | Marine | MYKQINENEFNKLLDSYEQGGTYQKKKSRITYNDWLVRYKDRTVQSIDVNEHTKWSKE |
| Ga0315332_104285764 | 3300031773 | Seawater | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYKGKTVHEIDVIEHSKWS |
| Ga0315326_106746991 | 3300031775 | Seawater | MYKQISEDEFNKLLNSYEQGGTYQKKKSTFTYNDWLIKYKGKTVHEIDVIEHSKWSKQYQSWKIG |
| Ga0315320_102713561 | 3300031851 | Seawater | MYKQISENEFNKLLNSYEQGGTYQKKKSSITYNGWLV |
| Ga0315327_101072721 | 3300032032 | Seawater | MYKQISENEFNKLLDSYEQGGTYQKKKSSFTYNDWLIKYKGKTVHEI |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |