NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F076493

Metagenome / Metatranscriptome Family F076493

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F076493
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 108 residues
Representative Sequence MTIKAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRSPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHLRAAEVMRELGWDATD
Number of Associated Samples 67
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 19.13 %
% of genes near scaffold ends (potentially truncated) 65.25 %
% of genes from short scaffolds (< 2000 bps) 95.76 %
Associated GOLD sequencing projects 61
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (80.508 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(48.305 % of family members)
Environment Ontology (ENVO) Unclassified
(45.763 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.051 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.
1OpTDRAFT_10128541
2GOS2217_100015042
3GOS2217_100361993
4JGI24540J26637_102045461
5Ga0066831_101924472
6Ga0066844_100756391
7Ga0066834_103034561
8Ga0070743_101232481
9Ga0075443_100609622
10Ga0075443_103783761
11Ga0105016_12395701
12Ga0105019_11906821
13Ga0105742_10193942
14Ga0110928_11642151
15Ga0115651_13199001
16Ga0115651_13823151
17Ga0115651_13888921
18Ga0115651_14410791
19Ga0115650_12386852
20Ga0115650_13055201
21Ga0102811_11139651
22Ga0102815_103443111
23Ga0114995_103966341
24Ga0114996_107573071
25Ga0115005_109030721
26Ga0115005_110108741
27Ga0115005_112692601
28Ga0115008_108924212
29Ga0115008_109610351
30Ga0115008_109893892
31Ga0115004_104617791
32Ga0115004_104745911
33Ga0115006_111727431
34Ga0115013_100207644
35Ga0115013_101248762
36Ga0115013_103948772
37Ga0115013_104974421
38Ga0115013_107571991
39Ga0115011_103695551
40Ga0115011_104142671
41Ga0115011_105571943
42Ga0115011_108993391
43Ga0115011_109464031
44Ga0115011_110654181
45Ga0115011_112656421
46Ga0115011_112797321
47Ga0115011_116734141
48Ga0115002_107612022
49Ga0115002_111924631
50Ga0115001_103385531
51Ga0115001_105491011
52Ga0115001_106367071
53Ga0115001_107334851
54Ga0115012_101781803
55Ga0115012_102892471
56Ga0115012_105758251
57Ga0115012_105942901
58Ga0115012_106482831
59Ga0115012_107533561
60Ga0115012_107881481
61Ga0115012_108598271
62Ga0115012_118789621
63Ga0115012_121098042
64Ga0160423_107605301
65Ga0163110_105812011
66Ga0163110_108928082
67Ga0163109_107857421
68Ga0163109_109383821
69Ga0163180_104815072
70Ga0163180_109614991
71Ga0163180_109965861
72Ga0163179_101236442
73Ga0163179_102046951
74Ga0163179_113692622
75Ga0163179_114255111
76Ga0163179_117791211
77Ga0163179_117894761
78Ga0163111_107923191
79Ga0163111_126281511
80Ga0129327_102878481
81Ga0180433_106545652
82Ga0193370_1008841
83Ga0193294_10303761
84Ga0194029_10899491
85Ga0211505_11220992
86Ga0211699_102147331
87Ga0211622_102815661
88Ga0211708_102855981
89Ga0211695_103640671
90Ga0211642_103422161
91Ga0211643_106432521
92Ga0211547_103292361
93Ga0226832_104872882
94Ga0233410_100320371
95Ga0255045_101178491
96Ga0255044_101980511
97Ga0255044_104979531
98Ga0208275_10938331
99Ga0207987_10302701
100Ga0208897_10763681
101Ga0209279_100866091
102Ga0209503_101636751
103Ga0209713_107160581
104Ga0209713_107956951
105Ga0209404_103302561
106Ga0209404_107954061
107Ga0233414_101429371
108Ga0308023_10494701
109Ga0302137_12269181
110Ga0302116_11316591
111Ga0307999_11563561
112Ga0302138_102589241
113Ga0308008_10886031
114Ga0310343_100208863
115Ga0315330_104668011
116Ga0310342_1021567681
117Ga0310342_1023359371
118Ga0310342_1035456921
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.28%    β-sheet: 0.00%    Coil/Unstructured: 56.72%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100MTIKAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRSPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHLRAAEVMRELGWDATDSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
19.5%80.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Water Bodies
Freshwater
Marine
Seawater
Seawater
Surface Seawater
Seawater
Marine
Freshwater To Marine Saline Gradient
Estuary Water
Seawater
Estuarine
Marine
Marine
Estuarine
Freshwater And Marine
Hydrothermal Vent Fluids
Seawater
Hypersaline Lake Sediment
48.3%3.4%7.6%5.9%6.8%11.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
OpTDRAFT_101285413300000864Freshwater And MarineSVTTDPGLIFHWKFPRCFSEELRWLATYVALSRPPSLAQLISVGLPDKLRNIIEAGPPEGILSRFDDMFKEKEEATHLRAAEVMRELGWDATD*
GOS2217_1000150423300001973MarineDTWYTIQVQRRQLPMTIKTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATLLKAAEVMRELGWDATD
GOS2217_1003619933300001973MarineVQVQRRQLPMTITTASTLHTLQGVTAEPGLIFHWKFPNNYPEEQRCLATYVALSRPPSLAQLISVGMPEELRKMIEGGPPPGILSRFDDMFAEKEEATRIKAAEVMHELGWTAGD*
JGI24540J26637_1020454613300002153MarinePMTIKKASTLYTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPVDLRDIIEGGPPEGIISKFDGLFGEIEEATHLRAAEVMRELGWSAAA*
Ga0066831_1019244723300005516MarineVLVEIAQTATSAQDVLQSSRSSPAAVDVEDPGSDTWYKIQVQRQQLPMTIKTASTIHTLQGVTTEPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGMPDELRNIVEAGPPKGILSRFHDMFNEKEDATHIRAAEVMRELGWDATD*
Ga0066844_1007563913300005567MarineIFHWKFPRFFSEELRWLATYVTLSRPPSLAQLISIGLPDELRNMIEDGPPEGILSRFNDMFKEKEDTTHIRAAEVMRELGWDATD*
Ga0066834_1030345613300005596MarineQNSKHNPCVARRDSSSWPHFHWKSPHILSEELRWLATYVVLSRPPSLAQLISVGLPDDLRNIIQGGPPEGILSRFNDMFKEKEDATHIRVAEVMRELGWDATD*
Ga0070743_1012324813300005941EstuarineSYTIRVQRRQLPMTIKAASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDAFRNIIEGGPPEGILSRFNDMFKDKEEATHLRAAEVMRELGWNATD*
Ga0075443_1006096223300006165MarineLKVQRRQLPMTIKKASTLYTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGMPSDLRNIIEGGPPAGIISKFDDLFGEIEKATHLRAAQVMRDLGWFAAS*
Ga0075443_1037837613300006165MarinePGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPGDLRDIIEGGPPEGIISKFDDLFGEIEEATHLRAAEVMRELGWSAAA*
Ga0105016_123957013300007512MarinePMTIKTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRKIIEGGPPQGILSRFDDMFKEKEEATHIRATEVMRELGWDAID*
Ga0105019_119068213300007513MarineLPITVKKASTLHTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPVDLRDIIEGGPPEGIISKFDDLFREVEEATHLRAAEVMRELGWSAAT*
Ga0105742_101939423300007957Estuary WaterVEVPHPNNPESTLTLRIQRRQVPMTIKTASTLHTLQGVTASPGLIFHWKFPRSMSAELRWLASYVALSRPESLAQLISIGPLDKLREIIEGGPPDGILTRFNDMFRELELATHVRAAEVMRELGWHDDA*
Ga0110928_116421513300008510Water BodiesVADPTPGSDRVYELRVQRRQLPMTIKAASTLHTLQGATASPGLIFHWRFPRFFSEELRWLATYVALSRPPSLAQLISIGLPLSLRGIIESGPPAGVLSRYAAMFSETEETTHARARCLLEELGWAAEGT*
Ga0115651_131990013300008952MarineLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPADLRDIIEGGPPEGIISKFDDLFHDIEVATHLRAAEVMRELGWSAAA*
Ga0115651_138231513300008952MarineTASTLHTLQGVTASPGLIFHWRFSRRIDKEVRWLATYVALSRPPSLAQLISIGLPANMRSIIEEGPPDGILTRFGDMFHEIEEATHLRAVEVLRELCW*
Ga0115651_138889213300008952MarineLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPADLRDIIEGGPPEGIISKFDDYFRDIEASTHLRAAEVVRELGWSAAT*
Ga0115651_144107913300008952MarineKVQRRQLPITVKKASTLHTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPVDLRDIIEGGPPEGIISKFDDLFRDIEVATHLRAAEVMRELGWSAAA*
Ga0115650_123868523300008954MarineMTIKTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFEEKEGATHIRAAEVMRELGWDATD*
Ga0115650_130552013300008954MarineQVQRRQLPMTIKTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRKIIEGGPPQGILSRFDDMFKEKEEATHIRATEVMRELGWDAID*
Ga0102811_111396513300009024EstuarineMTIKTASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRKIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATD*
Ga0102815_1034431113300009080EstuarineASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDAFRNIIEGGPPEGILSRFNDMFKDKEEATHLRAAEVMRELGWNATD*
Ga0114995_1039663413300009172MarineMTIKTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFEEKERATHIRAAEVMRELGWDATD*
Ga0114996_1075730713300009173MarinePVPGEANQYQLRVQRRQLPMTIRTASTIHTLQGATAHPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDDLRNIIEGGPPEGILSKFKDMFKEKEDVTHRRAAEVMRELGWDVTD*
Ga0115005_1090307213300009432MarineMTIKTASTIHTLQGVTTNPGLIFHWKSPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIESGPPEGILSRFNDMFKEKEEATHITAAEVMRELGWDVPSD*
Ga0115005_1101087413300009432MarineIKTPSTINTLEGVTTDPGFIFHRKLLRFFSEELWWLATYVALSRPPSLAQLISVGLPGELRNIVEAGPPEGILSRFDDMFKEKEEATHIRAADVMRELGWDGSD*
Ga0115005_1126926013300009432MarinePGSDTWYTLQVQIRQVPMTIKTASTINTLQSVTTDPGLIFHWKSPRFFSEELRWLATYVSLSRPPSLAQLISVGMPDDLRQIIESGPPEGILSRFNDMFKEKEEATHIRAAEVMRELGWDATD*
Ga0115008_1089242123300009436MarineVTTDPGLIFHWKFPRFFSSELRWLATYVALSRPPSLAQLISVGVPDELRSIIEAGPPEGILSRFDDMFKEKEEATHIRAAEVMRELGWDATD*
Ga0115008_1096103513300009436MarineLIFHWKYPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRSIIESGPPEGILSRFEDMFKEKEEATHIKAAEILRELGWDRTPRLVAGYLL*
Ga0115008_1098938923300009436MarineMTIETASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFEEKEGATHIRAAEVMRELGWDAID*
Ga0115004_1046177913300009526MarineQDPGSDTWYTIQVQRRQLPITIEAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFEEKEAATHIRAAEVMRELGWDATD*
Ga0115004_1047459113300009526MarineMPIKKASTLYTLQGVTATPGLIFHWKFPRFFSAEMRWLATYVALSRSESLAQLISVGIPADLRDIIEGGPPEGIISKFNDLFQEIEAATHLRAAEVMRELGWSAAT*
Ga0115006_1117274313300009544MarineQLPMTIKKASTLNTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPVDLRDIIEGGPPEGIISKFDDLFGEIEKATHLRAAEIMRELGWSAAA*
Ga0115013_1002076443300009550MarineIFHWKFPRFFSAELRWLATYVALSRPPSLKQLISVGLPDDIEALIQGGPPEGILSKFHDMFKEKELDTHEKALELMRQLGWNIEA*
Ga0115013_1012487623300009550MarineMTIKTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRSPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHLKAAEVMRELGWDATD*
Ga0115013_1039487723300009550MarineLATYVALSRPPSLKQLISVDLPDDIEALIQGGPPEGILSRFDDMFKEKELDTHEKALELMRQLGWNMEA*
Ga0115013_1049744213300009550MarineMVEVDDPESNASYTLRIQRKQLPLTIKTASTLNTLQGVTAEPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGMPDNLRNIIEGGPPEGILSRFNDMFKEKEDATHLRAAEVMRELGWDATD*
Ga0115013_1075719913300009550MarineQLPMTIKTASTIHTLQGTTAEPGIIFHWKFPRFFSAELRWLATYVALSRPPSLKQLISVDLPDDIEALIQGGPPEGILSRFDDMFKEKELDTHEKALELMRRLGWNMEA*
Ga0115011_1036955513300009593MarineTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRSPSLAQLISVGLPDNMRNIIEGGPPEGILSRFNDMFKEKEEATHLKAAEVMRELGWDATD*
Ga0115011_1041426713300009593MarineMTIHTLQGTTAEPGIIFHWKFPRFFSAELRWLATYDALSRPPSLKQFMSVDLPDDIKEPIQGGPPEGILSRFDDMFREKKLDTHEKALEIMQQLGWDMEE*
Ga0115011_1055719433300009593MarineFSAELRWLATYVALSRPPSLKQLISVDLPDDIEALIQGGPPEGILSRFDDMFKEKELDTHEKALELMRQLGWNMEA*
Ga0115011_1089933913300009593MarineVYLLRVKREQLPATIRTASTIHTLQGTTTAPGMIFHWKFPRFFSEELRWLATYVALSRPPSLQQLISVGMPIELRAIIEGGPPEGILTRFGDMFHEKEELTHRKAAEILAKLGWNWDD*
Ga0115011_1094640313300009593MarineMTIKTASTINTLRGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFKDMFQEKEEATHTKAAEVMRELGWAATD*
Ga0115011_1106541813300009593MarineMTIKTATTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRKIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATD*
Ga0115011_1126564213300009593MarineVKREQLPATIRTASTIHTLQGTTTAPGLIFHWKFPRFFSEELRWLATYVALSRPPSLQQLISVGMPIELRAIIEGGPPEGILTRFKDMFDEKEQFTHRKAEELLSKLGWDWAD*
Ga0115011_1127973213300009593MarineSRSFSMEIEHPSGGGDVSYSLRAQRRQLPLTIRATSTLHTLQGVTAEPGLIFHWKFPRFFSEETRWLAIYVALSRPPSFGQLISIGLPTGLRDIIEGGPPEGILTRFDAMFHELEVSTHLRAALIMAEMNW*
Ga0115011_1167341413300009593MarineMIFHWKYPRFFSEELRWLATYVALSRPPSLAQLISIGMPAELRKIIEGGPPPGILTRFEDMFDEIEQLTKSAADELLARLGWDWPDA*
Ga0115002_1076120223300009706MarineVEVEDTASSARYDLKVQRRQLPITIKKASTLNTLQGITATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPSDLRDIIEGGPPEGIISKFEDLFSDIEKATHLRAAEV
Ga0115002_1119246313300009706MarineMTIKTASTLNTLQGVTAEPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGMPLELKEIIEGGPPQGIISKFGDMFQETEDATHIRAAEVMKELGWDASDL*
Ga0115001_1033855313300009785MarineLPMTIKKASTLYTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPGDLRDIVEGGPPEGIISKFDDLFGEIEEATHLRAAEVMRELGWSAAA*
Ga0115001_1054910113300009785MarineMTMKTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFEEKERATHIRAAEVMRELGWDATD*
Ga0115001_1063670713300009785MarineIKKASTLYTLQGVTATPGLIFHWKFPRFFSAEMRWLATYVALSRPESLAQLISVGIPGDLRDIIKGGPPEGIISKFDDLFGEIEEATHLRAVEVMRELGWSAAA*
Ga0115001_1073348513300009785MarineTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRKIIEGGPPEGILSRFNDMFKEKEEATHIRAAEVMRELGWDATD*
Ga0115012_1017818033300009790MarineMTIKTASTISTLQGVTTDPGLIFHWKFPRFFAEELRWLATYVALARPPSLAQLISVGLPDELRNIIEGGPPDGILSRFNDMFKEKEEATHLRGAEVLRELGWDATD*
Ga0115012_1028924713300009790MarineLARRSFSVEVQDPMTDSTYTIQVQRVQLPMTIKTASTIHTLQGTTAEPGIIFHWKFPRFFSAELRWLATYVALSRPPSLKQLISVDLPDDIEKLIEGGPPSGILSRFDDMFREKELDTHKKALEIMRQLGWDWEE*
Ga0115012_1057582513300009790MarineEPGIIFHWKFPRFFSAELRWLATYAALSRPPSLKQFMSVDLPDDIKEPIQGRPPEGILSRFDDMFREKKLDTHEKALEIMQQLGWDMEE*
Ga0115012_1059429013300009790MarinePGLIFHWKFPRFFSEELRWLATYVALSRPPSLKQLISVEMPEGLRKIIEGGPPDGILTRFADMFDEKEQFTHRKAQEVLAKLGWEMGD*
Ga0115012_1064828313300009790MarineFHWKFPRFFSAELRWLATYVALSRPPSLKQLISVDLPDDIEALIQGGPPEGILSRFDDMFKEKELDTHEKALELMRQLGWNIEA*
Ga0115012_1075335613300009790MarineMMIRTASTINTLQGVTTNPGLIFHWKFPRFFSAELRWLATYVALSRPPSLAQLISVGLPDNLRNIIEGGPPEGILSRFCDMFKEKEDATHIRAAEVMRELGWDTTD*
Ga0115012_1078814813300009790MarineMVEVEDPESNACYTLRIQRKQLPLTIKTASTLNTLQGVTAEPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGMPDELRNIIEGGPPEGILSRYNDMFKEKEDATHLRAAEVMRELGWDATD*
Ga0115012_1085982713300009790MarineMTIKAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRSPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHLRAAEVMRELGWDATD*
Ga0115012_1187896213300009790MarineVELQLSRGSFTVEVEDAASGVRYDLKVQRRQLPMTIKKASTLYTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPGDLRDIIEGGPPEGIISKFDDLFGEIEEATHLRAAEVMRELGWSAAA*
Ga0115012_1210980423300009790MarineTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHLRAAEVLRDLGWDATD*
Ga0160423_1076053013300012920Surface SeawaterTASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELREIIEAGPPEGILSRFNDMFEEKEKATHRRAAKVMRELGWDATG*
Ga0163110_1058120113300012928Surface SeawaterIFHWKFPRFFSAELRWLATYAALSRPPSLKQFMSVDLPDDIKEPIQGRPPEGILSRFDDMFREKKLDTHKKALEIMQQLGWDMKE*
Ga0163110_1089280823300012928Surface SeawaterMTIKAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRSPSLAQLISVGLPDELRNIIEAGPPEGTLSRFDDMFKEKAPATHTRAAEVMRELSWDATD*
Ga0163109_1078574213300012936Surface SeawaterLATYAALSRPPSLKQFMSVDLPDDIKEPIQGRPPEGILSRFDDMFREKKLDTHEKALEIMQQLGWEMKE*
Ga0163109_1093838213300012936Surface SeawaterTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHLKAAEVMRELGWDATD*
Ga0163180_1048150723300012952SeawaterVPATIRTASTIHTLQGTTTAPGLIFHWKFPRFFSEELRWLATYVALSRPPSLQQLISVGMPIELRAIIEGGPPEGILTRFKDMFHEKEEFTHRKAAEMLVKLGWNWDD*
Ga0163180_1096149913300012952SeawaterVEVPDPDDPAFQFKLRVQRRQLPMTIKTASTLHTLQGVTASPGLIFHWKFPRLMSAELRWLATYVALSRPESLAQLISIGPLGNLRDTIESGPPDGILTRFNDMFQELELATHLRAAEVMQELGWNAAA*
Ga0163180_1099658613300012952SeawaterMTIKSASTLHTLQGTTTEPGLIFHWRFPRFFSEELRWLATYVALSRPPSFKQLISIGIPDSLRDIIEGGPPEGILSRFAAMFNEVEQETRLRASELLARLGWTEEYA*
Ga0163179_1012364423300012953SeawaterLIFHWKFPCFFSEELRWLATYVALSRPPSLAQLISVGLPDELKNIIEGGPPEGILSRFNDMFKEKEDATHIRAAEVMRELGWDTTD*
Ga0163179_1020469513300012953SeawaterVEPQLSRRSFPVEVQDPGSDTWYTIQVQRRQLPTTIKAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDQLRDIIEGGPPEGILSRFNDMFKEKEEATLLRAAEVMRELGWDATD*
Ga0163179_1136926223300012953SeawaterMTIRTASTIHTLQGVTASPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGIPKDLRSIIENGPPESILSRFNDMYKKKEEATHIRAVEVIRLGLSQS*
Ga0163179_1142551113300012953SeawaterMTIKAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEGGPPEGILSKFNDMFKEKEEATLLKAAEVMRELGWNATD*
Ga0163179_1177912113300012953SeawaterTIKAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRSIIESGPPEGILSRFNNMFKDKEEATHIKAADVLRELGWDATD*
Ga0163179_1178947613300012953SeawaterIGCIAVEPQLSRGAFKVEVPDPGSDRVYELRVQRRQLPITIKAASTLHTLQGWEPGLIFHWRFPRFFSEELRWLATYVALSRPPSLKQLISIGIPASLRDIIDNGPPNGILSRFGAMFDDTEKATHLAASELLARLGWA*
Ga0163111_1079231913300012954Surface SeawaterVQRRQLPMTIKTASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVTLSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFDEKEKATHIKAAEVMRELGWNATD*
Ga0163111_1262815113300012954Surface SeawaterFTRFFSEELRWLALSRPPSLAQLISVGLPDELRSIIESGPPEGILSRFEDMFKEKEEATHIKAAEIMRELGWDRIPPSYGWLFVVVVSWL*
Ga0129327_1028784813300013010Freshwater To Marine Saline GradientMTIKTASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWGATD*
Ga0180433_1065456523300018080Hypersaline Lake SedimentGTLHTLQGTETDPGLILHWRFPRFFSEELRWLATYVALSWPPSLKQLISIGIPDTLRDIIESGPPDGILSRFAAMFSDLEGETRLRASALLARLGWAEGGA
Ga0193370_10088413300018510MarineRVQRRQLPMTIKTASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRKIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATD
Ga0193294_103037613300018691MarineDTWYTIQVQRRQLPMTIKAASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRKIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATD
Ga0194029_108994913300019751FreshwaterTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATD
Ga0211505_112209923300020352MarineAQRSQRSFLVEVKDPGSENVYLLRVKREQLPATIRTASTIHTLQGTTTAPGLIFHWKFPRFFSEELRWLATYVALSRPPSLQQLISVGMPIELRAIIEGGPPEGILTRFKDMFYEKEEFTHRKAAEILVKLGWNWDD
Ga0211699_1021473313300020410MarineMTIKIASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELREIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATD
Ga0211622_1028156613300020430MarineMTIHTLQGTTAEPGIIFHWKFPRFFSAELRWLATYAALSRPPSLKQFMSVDLPDDIKEPIQGRPPEGILSRFDDMFREKKLDTHEKALEIM
Ga0211708_1028559813300020436MarineLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHLRAAEVMRELGWDATD
Ga0211695_1036406713300020441MarineMTIHILQGTTAEPGIIFHWKFPRFFSAELRWLATYVALSRPPSLKQLISVDLPDDIEALIQGGPPEGILSRFDDMFKEKELDTHEKALELMRQLGWNMEA
Ga0211642_1034221613300020449MarineQDPSGNCAYTIQVQRRQLPMTIKTASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRGIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATG
Ga0211643_1064325213300020457MarinePVEVEVQDPSGNCAYTIQVQRRQLPMTIKTASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRGLIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATD
Ga0211547_1032923613300020474MarineMTIHTLQGTTAEPGIIFHWKFPRFFSAELRWLATYAALSRPPSLKQFMSVDLPDDIKEPIQGGPPEGILSRFDDMFREKKLDTHEKALEIMQQLGWDMEE
Ga0226832_1048728823300021791Hydrothermal Vent FluidsHWKYPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPEGILSRFNDMFKEKEEATHIRAAEVMRELGWDATD
(restricted) Ga0233410_1003203713300023276SeawaterRQLPMTIKAASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDAFRNIIEGGPPEGILSRFNDMFKDKEEATHLRAAEVMRELGWNATD
(restricted) Ga0255045_1011784913300024528SeawaterIFPWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDAFRNIIEGGPPEGILSRFNDMFKDKEEATHLRAAEVMRELGWNATD
(restricted) Ga0255044_1019805113300024529SeawaterYPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDAFRNIIEGGPPEGILSRFNDMFKDKEEATHLRAAEVMRELGWNATD
(restricted) Ga0255044_1049795313300024529SeawaterTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDALRNIIEGGPPEGILSRFNDMFKDKEEATHLRAAEVMRELGWDVTD
Ga0208275_109383313300026182MarineVLVEIAQTATSAQDVLQSSRSSPAAVDVEDPGSDTWYKIQVQRQQLPMTIKTASTIHTLQGVTTEPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGMPDELRNIVEAGPPKGILSRFHDMFNEKEDATHIRAAEVMRELGWDATD
Ga0207987_103027013300026190MarineTLEVQDPGSDNVYTLRVQRRQLPMTIKTASTIHTLQGVTAYPGLIFHWKYPRFFSEELRWLATYVTLSRPPSLAQLISIGLPDELRNMIEDGPPEGILSRFNDMFKEKEDTTHIRAAEVMRELGWDATD
Ga0208897_107636813300027571EstuarineSYTIRVQRRQLPMTIKAASTIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDAFRNIIEGGPPEGILSRFNDMFKDKEEATHLRAAEVMRELGWNATD
Ga0209279_1008660913300027771MarinePIVVQDPGSDACYTLQVQRRQLPMTIRTASTINTLQGVTAKPGLIFHWKFPRFFSPELRWLATYVALSRPPSLAQLISVGLPANFRDIIEGGPPEGILSRYCDMFKEKEDATHIRAAEVMRELGWDATG
Ga0209503_1016367513300027859MarineDAWYEIQVQRRQLPMTIRTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRNIIEAGPPPGILSRFDDMFKEKEEATHIRAAQLMRELAWDATD
Ga0209713_1071605813300027883MarineIQPTYFVPASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDALRNIIEGGPPEGILSRFNDMFKEKEEATHLRAAEVMRELGWDATD
Ga0209713_1079569513300027883MarineQRRQLPMTIKTASTINTLQGVTTDPGLIFHWKFPRFFSAELRWLATYVALSRPPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHIRATEVMRELGWDATD
Ga0209404_1033025613300027906MarineNRCACTFPIQLQRAQLPMTIHTLQGTTAEPGIIFHWKFPRFFSAELRWLATYDALSRPPSLKQFMSVDLPDDIKEPIQGGPPEGILSRFDDMFREKKLDTHEKALEIMQQLGWDMEE
Ga0209404_1079540613300027906MarineSFPVEVQDPGSDTWYTIQVQRRQLPMTIKTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELKNIIEGGPPEGILSRFNDMFKEKEDATHIRAAEVMRELGWDTTD
(restricted) Ga0233414_1014293713300028045SeawaterIHTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDALRNIIEGGPPEGILSRFNDMFKDKEEATHLRAAEVMRELGWDVTD
Ga0308023_104947013300031167MarineEVVDTASSARYDLKVQRRQLPMTIKKASTLNTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPVDLRDIIEGGPPEGIISKFDDLFGEIEKATHLRAAEVMRELGWSAAA
Ga0302137_122691813300031588MarineKVQRRQLPMTIKKASTLYTLQGVTATPGLIFHWKFPRFFSAEMRWLATYVALSRPESLAQLISVGIPGDLRDIVEGGPPEGIISKFDDLFGEIEEATHLRAAEVMRELGWSAAA
Ga0302116_113165913300031597MarineIKKASTLYTLQGVTATPGLIFHWKFPRFFSAELRWLATYVALSRPESLAQLISVGIPGDLRDIVEGGPPEGIISKFDDLFGEIEEATHLRAVEVMRELGWSAAA
Ga0307999_115635613300031608MarineEVQDPGSDTWYTIQVQRRQLPMTIKAASTIHTLQGVTTDPGLIFHWKFPRFFSQELRWLATYVALSRPPSLAQLISVGLPDELRNIIEGGPPEGILSRFNDMFKEKEEATHLKAAEVMRELGWDATD
Ga0302138_1025892413300031637MarinePGLIFHWKFPRFFSAEMRWLATYVALSRPESLAQLISVGIPGDLRDIVEGGPPEGIISKFDDLFGEIEEATHLRAAEVMRELGWSAAA
Ga0308008_108860313300031687MarineYDLKVQRRQLPMTIKKASTLYTLQGVTATPGLIFHWKFPRFFNAELRWLATYVALSRPESLAQLISVGMPRDLRNIIEGGPPEGIISKFDDLFGEIEEATHLRARQVMRDLGWSAAA
Ga0310343_1002088633300031785SeawaterMTIHTLQGTTAEPGIIFHWKFPRFFSAELRWLATYAALSRPPSLKQFMSVDLPDDIKEPIQGRPPEGILSRFDDMFREKKLDTHEKALEIMQQLGWDMKE
Ga0315330_1046680113300032047SeawaterTASTINTLQGVTTDPGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRGIIEAGPPEGILSRFNDMFEEKEKATHIRAAEVMRELGWDATD
Ga0310342_10215676813300032820SeawaterGLIFHWRFPRFFSGELRWLATYVALSRPPSFKQLISIGLHGSLRGIIEGGPPDGILSRFAAMFNDVEKETHLRASELLARLGWAEDSA
Ga0310342_10233593713300032820SeawaterGLIFHWKFPRFFSEELRWLATYVALSRPPSLAQLISVGLPDELRKIIEGGPPQGILSRFDDMFKEKEEATHIRAAEVMRELGWDATD
Ga0310342_10354569213300032820SeawaterAVEPQLSRGAFKVEVPDPGSDRMYELRVQRRQVPMTIKSASTLHTLQGTTAEPGLRFHWRFPRFFSEELRWLATYVALSRPPSFKQLISVGAPGSLRDIIEGGPPDGILSRFAAMFNDVEEETRLRASELLARLGWAQDCA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.