NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075994

Metagenome / Metatranscriptome Family F075994

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075994
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 55 residues
Representative Sequence MKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER
Number of Associated Samples 51
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.42 %
% of genes near scaffold ends (potentially truncated) 30.51 %
% of genes from short scaffolds (< 2000 bps) 82.20 %
Associated GOLD sequencing projects 37
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (51.695 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge
(52.542 % of family members)
Environment Ontology (ENVO) Unclassified
(98.305 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(56.780 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 67.27%    β-sheet: 0.00%    Coil/Unstructured: 32.73%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF01402RHH_1 17.80
PF01476LysM 16.95
PF00176SNF2-rel_dom 16.10
PF04851ResIII 5.93
PF00271Helicase_C 5.93
PF00959Phage_lysozyme 2.54
PF09588YqaJ 2.54
PF12850Metallophos_2 1.69
PF12841YvrJ 1.69
PF16677GP3_package 0.85
PF13479AAA_24 0.85



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.02 %
UnclassifiedrootN/A38.98 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2209111016|draft_c1025962Not Available514Open in IMG/M
2209111016|draft_c1123632Not Available572Open in IMG/M
2209111016|draft_c361135Not Available516Open in IMG/M
2209111016|draft_c741040Not Available549Open in IMG/M
2209111016|draft_c796998Not Available529Open in IMG/M
2209111016|draft_c933145Not Available537Open in IMG/M
2209111016|draft_c950982Not Available532Open in IMG/M
2209111018|Meso_c1006739All Organisms → cellular organisms → Bacteria → Terrabacteria group539Open in IMG/M
2209111018|Meso_c1013724Not Available549Open in IMG/M
3300000494|AAW_1007479All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300000510|Foulum_1000942All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300000510|Foulum_1002976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium1209Open in IMG/M
3300000510|Foulum_1030179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1306Open in IMG/M
3300001975|Draft_10863492Not Available534Open in IMG/M
3300001975|Draft_11006739All Organisms → cellular organisms → Bacteria → Terrabacteria group543Open in IMG/M
3300001975|Draft_11013724Not Available553Open in IMG/M
3300002163|JGI24707J26582_10031484All Organisms → Viruses → Predicted Viral2241Open in IMG/M
3300002163|JGI24707J26582_10049950All Organisms → cellular organisms → Bacteria1550Open in IMG/M
3300002163|JGI24707J26582_10090831Not Available946Open in IMG/M
3300002163|JGI24707J26582_10124915Not Available737Open in IMG/M
3300002163|JGI24707J26582_10147283Not Available651Open in IMG/M
3300002163|JGI24707J26582_10166183Not Available596Open in IMG/M
3300002163|JGI24707J26582_10197308Not Available526Open in IMG/M
3300002164|JGI24708J26588_10039333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1900Open in IMG/M
3300002167|JGI24714J26587_10020456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales2494Open in IMG/M
3300002174|JGI24710J26742_10082622All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300002174|JGI24710J26742_10085711All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300002376|JGI24505J29691_1005758All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300002376|JGI24505J29691_1007506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1328Open in IMG/M
3300002378|JGI24502J29692_10028328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2061Open in IMG/M
3300002378|JGI24502J29692_10080082Not Available591Open in IMG/M
3300002378|JGI24502J29692_10109300Not Available744Open in IMG/M
3300002378|JGI24502J29692_10176115Not Available564Open in IMG/M
3300002392|JGI24503J29689_10030945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1242Open in IMG/M
3300002392|JGI24503J29689_10067437All Organisms → Viruses → Predicted Viral2762Open in IMG/M
3300002406|JGI24499J29688_1006627Not Available542Open in IMG/M
3300002406|JGI24499J29688_1053981All Organisms → cellular organisms → Bacteria → Terrabacteria group629Open in IMG/M
3300002837|bg3kmer60_1038755All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300002837|bg3kmer60_1039761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1164Open in IMG/M
3300002837|bg3kmer60_1112330Not Available502Open in IMG/M
3300002898|draft_10275591All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300002898|draft_10348331All Organisms → cellular organisms → Bacteria → Terrabacteria group723Open in IMG/M
3300002898|draft_10386899Not Available662Open in IMG/M
3300002898|draft_10392428All Organisms → cellular organisms → Bacteria → Terrabacteria group655Open in IMG/M
3300002898|draft_10451976Not Available583Open in IMG/M
3300003306|Ga0004534J46558_1015716Not Available634Open in IMG/M
3300005835|Ga0078910_127002All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300006674|Ga0101770_1070023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1752Open in IMG/M
3300006801|Ga0079223_10690588Not Available646Open in IMG/M
3300006840|Ga0101790_103838All Organisms → Viruses → Predicted Viral1175Open in IMG/M
3300009095|Ga0079224_105058278Not Available510Open in IMG/M
3300009653|Ga0116169_1012318All Organisms → cellular organisms → Bacteria4217Open in IMG/M
3300009653|Ga0116169_1129966Not Available879Open in IMG/M
3300009653|Ga0116169_1229999All Organisms → cellular organisms → Bacteria → Terrabacteria group614Open in IMG/M
3300009654|Ga0116167_1016421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes3837Open in IMG/M
3300009654|Ga0116167_1052238All Organisms → cellular organisms → Bacteria1675Open in IMG/M
3300009654|Ga0116167_1082209All Organisms → cellular organisms → Bacteria → Terrabacteria group1224Open in IMG/M
3300009654|Ga0116167_1153742All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300009654|Ga0116167_1155458All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300009654|Ga0116167_1244574Not Available582Open in IMG/M
3300009655|Ga0116190_1195467Not Available692Open in IMG/M
3300009655|Ga0116190_1256729Not Available577Open in IMG/M
3300009655|Ga0116190_1308904Not Available511Open in IMG/M
3300009657|Ga0116179_1011038All Organisms → cellular organisms → Bacteria5226Open in IMG/M
3300009657|Ga0116179_1047801All Organisms → cellular organisms → Bacteria1814Open in IMG/M
3300009657|Ga0116179_1063251All Organisms → Viruses → Predicted Viral1487Open in IMG/M
3300009657|Ga0116179_1224482Not Available627Open in IMG/M
3300009657|Ga0116179_1253985Not Available579Open in IMG/M
3300009658|Ga0116188_1114480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1051Open in IMG/M
3300009663|Ga0116181_1062893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium1610Open in IMG/M
3300009663|Ga0116181_1069248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1504Open in IMG/M
3300009663|Ga0116181_1142071Not Available930Open in IMG/M
3300009668|Ga0116180_1037534All Organisms → cellular organisms → Bacteria2463Open in IMG/M
3300009711|Ga0116166_1127768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes983Open in IMG/M
3300009711|Ga0116166_1202538Not Available725Open in IMG/M
3300009712|Ga0116165_1073160All Organisms → Viruses → Predicted Viral1332Open in IMG/M
3300009712|Ga0116165_1285324Not Available533Open in IMG/M
3300009712|Ga0116165_1298412Not Available518Open in IMG/M
3300009761|Ga0116168_1027115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1880Open in IMG/M
3300010311|Ga0116254_1012514All Organisms → Viruses → Predicted Viral4634Open in IMG/M
3300010327|Ga0116246_10247366All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300010338|Ga0116245_10183939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1152Open in IMG/M
3300010340|Ga0116250_10466635All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300010340|Ga0116250_10632512Not Available592Open in IMG/M
3300019218|Ga0179954_1232706All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300019227|Ga0179956_1190823Not Available504Open in IMG/M
3300019243|Ga0179953_1183474All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300019243|Ga0179953_1242974Not Available568Open in IMG/M
3300019243|Ga0179953_1309671Not Available502Open in IMG/M
3300025471|Ga0209508_1010118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes3631Open in IMG/M
3300025471|Ga0209508_1020044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1980Open in IMG/M
3300025471|Ga0209508_1025069All Organisms → cellular organisms → Bacteria1633Open in IMG/M
3300025589|Ga0209409_1011663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes3747Open in IMG/M
3300025589|Ga0209409_1015495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2993Open in IMG/M
3300025589|Ga0209409_1016122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2902Open in IMG/M
3300025589|Ga0209409_1043074All Organisms → Viruses → Predicted Viral1371Open in IMG/M
3300025589|Ga0209409_1062135All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300025589|Ga0209409_1078909All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300025605|Ga0209720_1026913Not Available2224Open in IMG/M
3300025609|Ga0209608_1023227All Organisms → Viruses → Predicted Viral2114Open in IMG/M
3300025613|Ga0208461_1007734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes6357Open in IMG/M
3300025613|Ga0208461_1077060Not Available970Open in IMG/M
3300025618|Ga0208693_1014723All Organisms → cellular organisms → Bacteria3617Open in IMG/M
3300025618|Ga0208693_1033975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1950Open in IMG/M
3300025618|Ga0208693_1064531All Organisms → cellular organisms → Bacteria → Terrabacteria group1179Open in IMG/M
3300025618|Ga0208693_1072553Not Available1072Open in IMG/M
3300025618|Ga0208693_1143846Not Available612Open in IMG/M
3300025631|Ga0209204_1056718All Organisms → Viruses → Predicted Viral1260Open in IMG/M
3300025638|Ga0208198_1010908All Organisms → cellular organisms → Bacteria4620Open in IMG/M
3300025638|Ga0208198_1040248All Organisms → Viruses → Predicted Viral1754Open in IMG/M
3300025657|Ga0208823_1082331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1048Open in IMG/M
3300025657|Ga0208823_1131106Not Available721Open in IMG/M
3300025683|Ga0208564_1084911All Organisms → Viruses → Predicted Viral1070Open in IMG/M
3300027510|Ga0209537_1000764All Organisms → cellular organisms → Bacteria38696Open in IMG/M
3300027510|Ga0209537_1027785All Organisms → cellular organisms → Bacteria2282Open in IMG/M
3300027510|Ga0209537_1041247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1573Open in IMG/M
3300028603|Ga0265293_10003930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes26929Open in IMG/M
3300029822|Ga0134854_1068575Not Available693Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge52.54%
Biogas FermentantionEngineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion21.19%
Solid Waste From BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor7.63%
Biogas FermenterEngineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter4.24%
Biogas FermenterEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter2.54%
Anaerobic DigesterEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester2.54%
Biogas ReactorEngineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor2.54%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil1.69%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate0.85%
Anaerobic DigesterEngineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Anaerobic Digester0.85%
Fermentation Pit MudEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud0.85%
Anaerobic ReactorEngineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Anaerobic Reactor0.85%
Food WasteEngineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Food Waste0.85%
Biogas ReactorEngineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Biogas Reactor0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2209111016Thermophilic bioreactor microbial communities at WVSU, USAEngineeredOpen in IMG/M
2209111018Mesophilic bioreactor microbial communities at Bielefeld, GermanyEngineeredOpen in IMG/M
3300000494Anaerobic digester microbial communities from Northern Denmark, sample from West Aalborg sludgeEngineeredOpen in IMG/M
3300000510Anaerobic digester microbial communities from Northern Denmark, sample from Foulum manureEngineeredOpen in IMG/M
3300001975Biogas fermenter microbial communities from the University of Hamburg, GermanyEngineeredOpen in IMG/M
3300002163Biogas fermentation microbial communities from Germany - Plant 1 DNA1EngineeredOpen in IMG/M
3300002164Biogas fermentation microbial communities from Germany - Plant 1 DNA2EngineeredOpen in IMG/M
3300002167Biogas fermentation microbial communities from Germany - Plant 4 DNA2EngineeredOpen in IMG/M
3300002174Biogas fermentation microbial communities from Germany - Plant 2 DNA2EngineeredOpen in IMG/M
3300002376Biogas fermentation microbial communities from Germany - Plant 4 RNA2 (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300002378Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300002392Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300002406Biogas fermentation microbial communities from Germany - Plant 1 RNA2 (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300002837Biogas reactor microbial communities from SLU, Sweden, that are enriched on cellulose - Sample No3 60kmerEngineeredOpen in IMG/M
3300002898Metagenome Biopara biogasfermenter May 2013 pooledEngineeredOpen in IMG/M
3300003306Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300005835Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 1 to 3 kb readsEngineeredOpen in IMG/M
3300006674Anaerobic microbial community collected from a biogas reactor in Fredrikstad, Norway. Combined Assembly of Gp0117115, Gp0124038EngineeredOpen in IMG/M
3300006801Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011EnvironmentalOpen in IMG/M
3300006840Anaerobic bioreactor microbial communities from Canach, LuxembourgEngineeredOpen in IMG/M
3300009095Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015EnvironmentalOpen in IMG/M
3300009653Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaGEngineeredOpen in IMG/M
3300009654Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaGEngineeredOpen in IMG/M
3300009655Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaGEngineeredOpen in IMG/M
3300009657Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaGEngineeredOpen in IMG/M
3300009658Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaGEngineeredOpen in IMG/M
3300009663Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaGEngineeredOpen in IMG/M
3300009668Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaGEngineeredOpen in IMG/M
3300009711Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaGEngineeredOpen in IMG/M
3300009712Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaGEngineeredOpen in IMG/M
3300009761Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaGEngineeredOpen in IMG/M
3300010311AD_JPTRcaEngineeredOpen in IMG/M
3300010327AD_CNMVcaEngineeredOpen in IMG/M
3300010338AD_JPMRcaEngineeredOpen in IMG/M
3300010340AD_USOAcaEngineeredOpen in IMG/M
3300019218Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR3_MetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300019227Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR3_MetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300019243Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR2_MetaT (Metagenome Metatranscriptome)EngineeredOpen in IMG/M
3300025471Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025589Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025605Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025609Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025613Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025618Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025631Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025638Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025657Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025683Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)EngineeredOpen in IMG/M
3300027510Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)EngineeredOpen in IMG/M
3300028603Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138REngineeredOpen in IMG/M
3300029822Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-TEngineeredOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
draft_102596212209111016Solid Waste From BioreactorCIIRDERRDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER
draft_112363212209111016Solid Waste From BioreactorMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKEGEENDASMDRR
draft_36113522209111016Solid Waste From BioreactorMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKESEENDASMDRR
draft_74104022209111016Solid Waste From BioreactorMRLPKARITLDLDHDLLKWVMRKVQETKKSRNEVIGQIIRLAKESEENEASMDER
draft_79699812209111016Solid Waste From BioreactorMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEAPMDER
draft_93314532209111016Solid Waste From BioreactorRSIIRDERRDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER
draft_95098232209111016Solid Waste From BioreactorTRITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER
Meso_100673912209111018Solid Waste From BioreactorRDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER
Meso_101372412209111018Solid Waste From BioreactorLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKEGEENEASTDER
AAW_100747923300000494Anaerobic DigesterMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
Foulum_100094243300000510Anaerobic DigesterMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQCIRLAKESEENDAPMDKR*
Foulum_100297623300000510Anaerobic DigesterMKLPKVRITLDLEHELFEWIMRKVEKTGNSRNGVIGEIIQKAMEGEENEKKLDKR*
Foulum_103017923300000510Anaerobic DigesterMKLPKVRITLDLEHELFEWIMRKVEKTGRSRNGVIGEIIQKVMEGEENEKKLAER*
Draft_1086349213300001975Biogas FermenterMRLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKEGEENEASTDER*
Draft_1100673913300001975Biogas FermenterQRDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
Draft_1101372413300001975Biogas FermenterLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKEGEENEASTDER*
JGI24707J26582_1003148423300002163Biogas FermentantionMKLPKVRITLDLEHELFKWIMRKVEKTGSSRNAVIGEIIQKAMEGEENEKKLDKR*
JGI24707J26582_1004995053300002163Biogas FermentantionMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQCIRLAKEGEENDAPMDKR*
JGI24707J26582_1009083123300002163Biogas FermentantionMKLPKARITLDLDHDLLEWVMRRVQETKNSRNEVIGQIIRLAKEREENEASERLD*
JGI24707J26582_1012491533300002163Biogas FermentantionEGRDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQCIRLAKENEDNQVSMDER
JGI24707J26582_1014728323300002163Biogas FermentantionMKLPKARITLDLDHDLLEWIMRKVQETKKSRNEVIGQMIKLAKENEDNQVSMDE
JGI24707J26582_1016618323300002163Biogas FermentantionMKLPKARITLDLDHDLLEWVMKKVQETKKSRNEVIGQIIRLAKEGEENDESMDER*
JGI24707J26582_1019730823300002163Biogas FermentantionMKLPKARITLDLDHDLLEWIMRRVQETKNSRNEVIGQIIRLAKESEENEASMDER*
JGI24708J26588_1003933353300002164Biogas FermentantionMKLPKVRITLDLEHELFEWIMRKVEKTGSSRNAVIGEIIQKAMEGEENEKKLDKR*
JGI24714J26587_1002045673300002167Biogas FermentantionSCIIGGEGRDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEIIGQCIRLAKESEENDAPMDKR*
JGI24710J26742_1008262243300002174Biogas FermentantionMRLPKARITLDLEQELLEWIMRKVEKTGSSRNGVIGQIIRLAKESEENVKKER*
JGI24710J26742_1008571143300002174Biogas FermentantionMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEXIGQCIRLAKEXEENDAPMDKR*
JGI24505J29691_100575813300002376Biogas FermentantionKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQCIRLAKESEENDAPMDKR*
JGI24505J29691_100750613300002376Biogas FermentantionERRDTMRLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER
JGI24502J29692_1002832813300002378Biogas FermentantionDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
JGI24502J29692_1008008213300002378Biogas FermentantionMKLPXAXITLDLDHDLLEWIMRKVQETKKSRNEVIGQMIKLAKENEDNQVSMDER*
JGI24502J29692_1010930013300002378Biogas FermentantionITLDLDHDLLEWVMRRVQETKNSRNEVIGQIIRLAKEREENEASERLD*
JGI24502J29692_1017611513300002378Biogas FermentantionKLPKARITLDLEHELLEWIMRKVKKTGSSRNEVIGQIIRLAKESEENEASMDER*
JGI24503J29689_1003094513300002392Biogas FermentantionTLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
JGI24503J29689_1006743713300002392Biogas FermentantionLPKARITLDLDHDLLEWVMRKVQETKXSRNEVIGRIIRLAKESEENEA*
JGI24499J29688_100662713300002406Biogas FermentantionARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
JGI24499J29688_105398113300002406Biogas FermentantionMKLPKARITLDLEHELLEWIMRKAKKTGSSRNGVIGEIIRKAMEGEANGKKLDKR*
bg3kmer60_103875523300002837Biogas ReactorMKLPKARITLDLDHDLLEWIMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
bg3kmer60_103976133300002837Biogas ReactorMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGRIIRLAKESEENEA*
bg3kmer60_111233023300002837Biogas ReactorMKLPKARITLDLEHELLEWIMRKVEKTGSSRNGVIGKIIRKAMEGEENEKKLDKR*
draft_1027559133300002898Biogas FermenterMKLPKARITLDLEHELLEWIMRKAEKTGSSRNGVIGEIIRKAKEGEANEKKLDKR*
draft_1034833113300002898Biogas FermenterIIRDERRDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGRIIRLAKESEENEA*
draft_1038689913300002898Biogas FermenterMKLPKARITLDLDHDLLEWIMRKVQETKNSRNEVIGQIIRLAKESEENDAPMDKR*
draft_1039242813300002898Biogas FermenterMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIKLAKESEENEASVDER*
draft_1045197613300002898Biogas FermenterMKLPKARITLDLDHDLLEWIMRKVQETKKSRNEVIGQMIKLAKENEDNQVSMDER*
Ga0004534J46558_101571613300003306Biogas FermentantionDTMKLPKARITLDLDHDLLEWVMRRVQETKNSRNEVIGQIIRLAKEREENEASERLD*
Ga0078910_12700243300005835Biogas ReactorMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEIIGQCIRLAKEGEENDAPMDKR*
Ga0101770_107002323300006674Food WasteMKLPKARITLDLDHDLLEWIMRKVQETKKSRNEVIGQIIRLAKESEENEA*
Ga0079223_1069058813300006801Agricultural SoilMKLPKARITLDLDHDLLEWIMRKVQETKNSRNKVIGQIIRLAKESEENEASERLD*
Ga0101790_10383813300006840Anaerobic ReactorMKLPKARITLDLDHDLLEWIMRRVQETKNSRNEVIGQIIRLAKESEENEASERSERLD*
Ga0079224_10505827823300009095Agricultural SoilMKLPKARITLDLDHDLLEWVMRKVQETKTSRNEIIGQCIRLAKESEENDASMDER*
Ga0116169_101231863300009653Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMVKVQETKKSRNEVIGQIIRLAKESEENEASMDER*
Ga0116169_112996623300009653Anaerobic Digestor SludgeMKLPKVRITLDLEHKLFEWIMRKVEKTGSSRNAVIGEIIQKAMEGEENEKKLDKG*
Ga0116169_122999913300009653Anaerobic Digestor SludgeRITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
Ga0116167_101642123300009654Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVKETGSSRNGVIGEIIRLAKEGEENDAPMDGR*
Ga0116167_105223823300009654Anaerobic Digestor SludgeMKLPKARITLDLEHELLEWIMRKAEKTGSSRNGVIGEIIRKAMEGEANEKKLDKR*
Ga0116167_108220913300009654Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVEKTGSSRNAVIGEIIQKAMEGEENEKKLAER*
Ga0116167_115374233300009654Anaerobic Digestor SludgeMRDERRDTMKLPKARITLDLDHDLLEWVMRKVQETKNSRNAIIGQIIRLAKEGEENDAPMDER*
Ga0116167_115545823300009654Anaerobic Digestor SludgeMRDERRDTMKLPKARITLDLDHDLLEWIMRRVQETKNSRNEVIGQIIRLAKESEENEASMDER*
Ga0116167_124457423300009654Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQCIRLAKEGEENDAPMDER*
Ga0116190_119546723300009655Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWIMRKVQETKNSRNEVIGQIIRLAKESEENEASMDKR*
Ga0116190_125672913300009655Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWIMRKVQETKNSRNEVIGQIIRLAKESEENE
Ga0116190_130890413300009655Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVEKTGSSRNGVIGEIIQKAMEGEENEKKLAER*
Ga0116179_101103843300009657Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVEKTGNSRNGVIGEIIQKAMEDEKERK*
Ga0116179_104780143300009657Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVKETGSSRNGVIGEIIRLAKEGEENDASMDGR*
Ga0116179_106325113300009657Anaerobic Digestor SludgeMKLPKVRITLDLDHDLFLWVMMKVQETKKSRNKVIGQIIRLAKDGKENETSTDER*
Ga0116179_122448223300009657Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGRIIRLAKES
Ga0116179_125398513300009657Anaerobic Digestor SludgeMTLDLDHDLFLWVMMKVQETKKSRNEVIGQFIRLAKEGEENDASMDGR*LRQLF
Ga0116188_111448013300009658Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWVMRKVQETKNSRNEVIGQIIRLAKESEENEA*
Ga0116181_106289323300009663Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKESEENDASMDER*
Ga0116181_106924823300009663Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKRREETWEKERGND*
Ga0116181_114207113300009663Anaerobic Digestor SludgeMKLPKIRMTLDLDHDLFLWVMMKVQETKKSRNEVIGQFIRLAKEGKENETSTDER*
Ga0116180_103753443300009668Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGRIIRLAKESEENEASMDER*
Ga0116166_112776813300009711Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVKETGSSRNSVIGEIIRLAKEGEENDAPMDGR*
Ga0116166_120253813300009711Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVEKTGSSRNAVIGEIIQKAMEGEENEKKLAE*
Ga0116165_107316013300009712Anaerobic Digestor SludgeKGGDTMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKESEENEA*
Ga0116165_128532413300009712Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVEKTGSSRNAVIGEIIQKAMEGEENEKKLA
Ga0116165_129841223300009712Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQCIRLAKEGEENDAPMDEL*
Ga0116168_102711523300009761Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKESEENEA*
Ga0116254_101251433300010311Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWVMRKVEKTGSSRNGVIGEIIQKAMEGEENEKKLAER*
Ga0116246_1024736613300010327Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEEN
Ga0116245_1018393923300010338Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWIMKKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
Ga0116250_1046663533300010340Anaerobic Digestor SludgeQSCIMRGERRDTMKLPKARITLDLDHDLLEWVMRKVQETKTSRNEVIGQCIRLAKESEENEASMDER*
Ga0116250_1063251213300010340Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKES
Ga0179954_123270643300019218Anaerobic Digestor SludgeRITLDLEHELFEWIMRKVKETGSSRNSVIGEIIRLAKEGEENDAPMDER
Ga0179956_119082333300019227Anaerobic Digestor SludgeKLPKVRITLDLEHELFEWVMRKVEKTGSSRNGVIGEIIQKAMEGEENEKKLAER
Ga0179953_118347413300019243Anaerobic Digestor SludgeLPKARITLDLDHDLLEWVMRKVQETKNSRNAIIGQIIRLAKEGEENDAPMDER
Ga0179953_124297413300019243Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVEKTGSSRNAVIGEIIQKAMEGEENEKKLAER
Ga0179953_130967133300019243Anaerobic Digestor SludgeDTMKLPKARITLDLDHDLLEWIMKKVQETKNSRNEVIGQIIRLAKESEENEASMDER
Ga0209508_101011823300025471Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER
Ga0209508_102004433300025471Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKESEENEA
Ga0209508_102506943300025471Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMVKVQETKKSRNEVIGQIIRLAKESEENEASMDER
Ga0209409_101166323300025589Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWIMKKVQETKNSRNEVIGQIIRLAKESEENEASMDER
Ga0209409_101549573300025589Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWIMRRVQETKNSRNEVIGQIIRLAKESEENEASMDER
Ga0209409_101612253300025589Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEA
Ga0209409_104307413300025589Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVKETGSSRNGVIGEIIRLAKEGEENDAPMDGR
Ga0209409_106213513300025589Anaerobic Digestor SludgeMKLPKARITLDLEHELLEWIMRKAEKTGSSRNGVIGEIIRKAMEGEANEKKLDKR
Ga0209409_107890923300025589Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQCIRLAKEGEENDAPMDER
Ga0209720_102691323300025605Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNAIIGQIIRLAKEGEENDAPMDER
Ga0209608_102322743300025609Anaerobic Digestor SludgeMKLPKARITLDLEHELLEWIMRKAEKTGSSRNGVIGEIIRKAKEGEANEKKLDKR
Ga0208461_100773493300025613Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWVMRKVEKTGSSRNGVIGEIIQKAMEGEENEKKLAER
Ga0208461_107706033300025613Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWIMRKVQETKNSRNEVIGQIIRLAKESEENEASMDKR
Ga0208693_101472333300025618Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGRIIRLAKESEENEASMDER
Ga0208693_103397523300025618Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGRIIRLAKESEENEA
Ga0208693_106453123300025618Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKRREETWEKERGND
Ga0208693_107255323300025618Anaerobic Digestor SludgeMKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENETSMDER
Ga0208693_114384623300025618Anaerobic Digestor SludgeMKLPKVRITLDLDHDLFLWVMMKVQETKKSRNKVIGQIIRLAKDGKENETSTDER
Ga0209204_105671823300025631Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWIMRKVKETGSSRNSVIGEIIRLAKEGEENDAPMDGR
Ga0208198_101090893300025638Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWVMRKVEKTGSSRNGVIGEIIQKAMEGEENEKKLA
Ga0208198_104024823300025638Anaerobic Digestor SludgeMKLPKVRITLDLEHELFEWVMRKVQETKNSRNEVIGQIIRLAKESEENEA
Ga0208823_108233113300025657Anaerobic Digestor SludgeRDTMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQIIRLAKESEENDASMDER
Ga0208823_113110623300025657Anaerobic Digestor SludgeMKLPKIRMTLDLDHDLFLWVMMKVQETKKSRNEVIGQFIRLAKEGKENETSTDER
Ga0208564_108491123300025683Anaerobic Digestor SludgeMKIPKIRMTLDLDHDLFLWVMMKVQETKKSRNEVIGQFIRLAKEGKENETSTDER
Ga0209537_1000764293300027510Biogas FermentantionMRLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER
Ga0209537_102778553300027510Biogas FermentantionMKLPKARITLDLDHDLLEWVMRKVQETKKSRNEVIGQMIKLAKENEDNQVSMDER
Ga0209537_104124723300027510Biogas FermentantionMKLPKVRITLDLEHELFEWIMRKVEKTGSSRNAVIGEIIQKAMEGEENEKKLDKR
Ga0265293_10003930103300028603Landfill LeachateMKLPKARITLDLEHELLEWIMRKVEKTGSSRNGVIGEIIQKAMEGEENEKKLDKR
Ga0134854_106857513300029822Fermentation Pit MudMKLPKARITLDLDHDLLEWIMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.