NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F075466

Metagenome Family F075466

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075466
Family Type Metagenome
Number of Sequences 119
Average Sequence Length 104 residues
Representative Sequence MNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAECGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN
Number of Associated Samples 66
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 79.83 %
% of genes near scaffold ends (potentially truncated) 31.93 %
% of genes from short scaffolds (< 2000 bps) 91.60 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.143 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment
(22.689 % of family members)
Environment Ontology (ENVO) Unclassified
(27.731 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Sediment (saline)
(35.294 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.06%    β-sheet: 10.45%    Coil/Unstructured: 51.49%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF01381HTH_3 7.56
PF05973Gp49 2.52
PF02696SelO 1.68
PF02661Fic 1.68
PF13560HTH_31 1.68
PF04221RelB 1.68
PF12872OST-HTH 0.84
PF13411MerR_1 0.84
PF01841Transglut_core 0.84
PF01797Y1_Tnp 0.84
PF03747ADP_ribosyl_GH 0.84
PF12844HTH_19 0.84
PF00291PALP 0.84
PF05195AMP_N 0.84
PF00285Citrate_synt 0.84
PF00313CSD 0.84
PF13744HTH_37 0.84
PF03695UPF0149 0.84
PF132794HBT_2 0.84
PF05717TnpB_IS66 0.84
PF05016ParE_toxin 0.84
PF01979Amidohydro_1 0.84
PF00106adh_short 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 2.52
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 2.52
COG0397Protein adenylyltransferase (AMPylase) SelO/YdiU (selenoprotein O)Posttranslational modification, protein turnover, chaperones [O] 1.68
COG3077Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin moduleDefense mechanisms [V] 1.68
COG0006Xaa-Pro aminopeptidaseAmino acid transport and metabolism [E] 0.84
COG0372Citrate synthaseEnergy production and conversion [C] 0.84
COG1397ADP-ribosylglycohydrolasePosttranslational modification, protein turnover, chaperones [O] 0.84
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.84
COG3079Uncharacterized conserved protein YgfB, UPF0149 familyFunction unknown [S] 0.84
COG3436TransposaseMobilome: prophages, transposons [X] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms57.14 %
UnclassifiedrootN/A42.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001372|YBBDRAFT_1069296All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria506Open in IMG/M
3300003991|Ga0055461_10227984All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria509Open in IMG/M
3300004008|Ga0055446_10222098All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria568Open in IMG/M
3300004028|Ga0055447_10217734All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria621Open in IMG/M
3300004051|Ga0055492_10192777All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria501Open in IMG/M
3300004056|Ga0055478_10095260All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria832Open in IMG/M
3300004067|Ga0055485_10117985All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria695Open in IMG/M
3300004075|Ga0055519_10105135All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria632Open in IMG/M
3300004097|Ga0055584_100251486All Organisms → cellular organisms → Bacteria1804Open in IMG/M
3300004150|Ga0055520_10116718Not Available615Open in IMG/M
3300004150|Ga0055520_10125636All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300005588|Ga0070728_10656086Not Available540Open in IMG/M
3300005589|Ga0070729_10113464All Organisms → cellular organisms → Bacteria → Proteobacteria1637Open in IMG/M
3300005589|Ga0070729_10727242Not Available532Open in IMG/M
3300005590|Ga0070727_10079811All Organisms → cellular organisms → Bacteria → Proteobacteria1902Open in IMG/M
3300005600|Ga0070726_10190608Not Available1048Open in IMG/M
3300005601|Ga0070722_10092565All Organisms → cellular organisms → Bacteria → Proteobacteria1148Open in IMG/M
3300005601|Ga0070722_10125760All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp.1007Open in IMG/M
3300005612|Ga0070723_10128219All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300005612|Ga0070723_10388836Not Available674Open in IMG/M
3300005612|Ga0070723_10553746All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria573Open in IMG/M
3300005612|Ga0070723_10593029Not Available555Open in IMG/M
3300005836|Ga0074470_11327856All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1147Open in IMG/M
3300005920|Ga0070725_10143589Not Available1032Open in IMG/M
3300006467|Ga0099972_12485651Not Available993Open in IMG/M
3300006467|Ga0099972_13354855Not Available814Open in IMG/M
3300006467|Ga0099972_13494867All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria723Open in IMG/M
3300009030|Ga0114950_10019685All Organisms → cellular organisms → Bacteria → Proteobacteria5269Open in IMG/M
3300009030|Ga0114950_10074016Not Available2699Open in IMG/M
3300009030|Ga0114950_10977109All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria663Open in IMG/M
3300009033|Ga0102956_1177876All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas703Open in IMG/M
3300009075|Ga0105090_10247179All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300009139|Ga0114949_11703443Not Available504Open in IMG/M
3300009167|Ga0113563_11503612All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium793Open in IMG/M
3300009509|Ga0123573_11327274All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria670Open in IMG/M
3300009509|Ga0123573_11340199Not Available667Open in IMG/M
3300009509|Ga0123573_11649404All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria595Open in IMG/M
3300010392|Ga0118731_100195946Not Available664Open in IMG/M
3300010392|Ga0118731_103857291All Organisms → cellular organisms → Bacteria1640Open in IMG/M
3300010392|Ga0118731_104055261Not Available582Open in IMG/M
3300010392|Ga0118731_104766268All Organisms → cellular organisms → Bacteria → Proteobacteria947Open in IMG/M
3300010392|Ga0118731_106371826Not Available904Open in IMG/M
3300010392|Ga0118731_109821257All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria862Open in IMG/M
3300010392|Ga0118731_110389519All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300010392|Ga0118731_110923275All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1685Open in IMG/M
3300010392|Ga0118731_115024129All Organisms → cellular organisms → Bacteria → Proteobacteria1831Open in IMG/M
3300010412|Ga0136852_10404051Not Available1333Open in IMG/M
3300010412|Ga0136852_10468717All Organisms → cellular organisms → Bacteria → Proteobacteria1223Open in IMG/M
3300010412|Ga0136852_10542998All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300010412|Ga0136852_11141506Not Available740Open in IMG/M
3300010412|Ga0136852_11223579Not Available713Open in IMG/M
3300010412|Ga0136852_11651236All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria606Open in IMG/M
3300010430|Ga0118733_100250917All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium3499Open in IMG/M
3300010430|Ga0118733_101174838Not Available1532Open in IMG/M
3300010430|Ga0118733_101347988All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1423Open in IMG/M
3300010430|Ga0118733_101767977All Organisms → cellular organisms → Bacteria → Proteobacteria1231Open in IMG/M
3300010430|Ga0118733_102717538All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium976Open in IMG/M
3300010430|Ga0118733_104008581Not Available791Open in IMG/M
3300010430|Ga0118733_105856628All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium645Open in IMG/M
3300010430|Ga0118733_106080469Not Available632Open in IMG/M
3300010430|Ga0118733_106459443Not Available612Open in IMG/M
3300010430|Ga0118733_108012180Not Available547Open in IMG/M
3300011118|Ga0114922_11667100All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria511Open in IMG/M
3300011122|Ga0151656_110121Not Available846Open in IMG/M
3300013098|Ga0164320_10247178Not Available841Open in IMG/M
3300013098|Ga0164320_10510345Not Available613Open in IMG/M
3300013101|Ga0164313_10017808All Organisms → cellular organisms → Bacteria → Proteobacteria6074Open in IMG/M
3300013101|Ga0164313_10423940Not Available1110Open in IMG/M
3300014316|Ga0075339_1129661All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria684Open in IMG/M
3300019697|Ga0194007_1011331All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria796Open in IMG/M
3300019743|Ga0193992_1040315Not Available641Open in IMG/M
3300020235|Ga0212228_1132449All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria24961Open in IMG/M
3300020235|Ga0212228_1226571All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1363Open in IMG/M
3300020235|Ga0212228_1328331All Organisms → cellular organisms → Bacteria2869Open in IMG/M
3300021514|Ga0190293_1088005Not Available864Open in IMG/M
3300022308|Ga0224504_10297005All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria670Open in IMG/M
(restricted) 3300023112|Ga0233411_10188318Not Available679Open in IMG/M
(restricted) 3300024062|Ga0255039_10110299All Organisms → cellular organisms → Bacteria → Proteobacteria1104Open in IMG/M
(restricted) 3300024062|Ga0255039_10389652Not Available602Open in IMG/M
(restricted) 3300024338|Ga0255043_10289727Not Available567Open in IMG/M
(restricted) 3300024338|Ga0255043_10296111Not Available561Open in IMG/M
(restricted) 3300024519|Ga0255046_10261566All Organisms → cellular organisms → Bacteria → Proteobacteria801Open in IMG/M
(restricted) 3300024519|Ga0255046_10512952Not Available575Open in IMG/M
(restricted) 3300024528|Ga0255045_10109339Not Available1014Open in IMG/M
(restricted) 3300024528|Ga0255045_10197890Not Available783Open in IMG/M
(restricted) 3300024528|Ga0255045_10467863Not Available522Open in IMG/M
(restricted) 3300024529|Ga0255044_10081139Not Available1147Open in IMG/M
(restricted) 3300024529|Ga0255044_10149926All Organisms → cellular organisms → Bacteria891Open in IMG/M
(restricted) 3300024529|Ga0255044_10181938Not Available819Open in IMG/M
3300025883|Ga0209456_10067894All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300025883|Ga0209456_10109987Not Available1213Open in IMG/M
3300025895|Ga0209567_10188197Not Available971Open in IMG/M
3300027790|Ga0209273_10170654Not Available926Open in IMG/M
3300027828|Ga0209692_10065862All Organisms → cellular organisms → Bacteria → Proteobacteria1865Open in IMG/M
(restricted) 3300027837|Ga0255041_10008273All Organisms → cellular organisms → Bacteria2670Open in IMG/M
(restricted) 3300027837|Ga0255041_10371187Not Available524Open in IMG/M
3300027845|Ga0209271_10047735Not Available1780Open in IMG/M
3300027845|Ga0209271_10079519Not Available1358Open in IMG/M
3300027858|Ga0209013_10094487Not Available1971Open in IMG/M
3300027858|Ga0209013_10363173Not Available812Open in IMG/M
3300027917|Ga0209536_100062094All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4844Open in IMG/M
3300027967|Ga0209272_10128535Not Available900Open in IMG/M
3300027975|Ga0209391_10128892All Organisms → cellular organisms → Bacteria1098Open in IMG/M
(restricted) 3300027997|Ga0255057_10181251All Organisms → cellular organisms → Bacteria1023Open in IMG/M
(restricted) 3300027997|Ga0255057_10334770All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria734Open in IMG/M
3300028598|Ga0265306_10349060All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria800Open in IMG/M
3300031727|Ga0316576_10743395All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium709Open in IMG/M
3300032173|Ga0315268_10092044All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2856Open in IMG/M
3300032231|Ga0316187_10039767All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3789Open in IMG/M
3300032231|Ga0316187_10686559All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria759Open in IMG/M
3300032257|Ga0316205_10164898All Organisms → cellular organisms → Bacteria → Proteobacteria856Open in IMG/M
3300032260|Ga0316192_10245108All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1239Open in IMG/M
3300032260|Ga0316192_11059211All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium542Open in IMG/M
3300032262|Ga0316194_10141658All Organisms → cellular organisms → Bacteria → Proteobacteria1548Open in IMG/M
3300032272|Ga0316189_10571537Not Available867Open in IMG/M
3300032272|Ga0316189_10835658Not Available700Open in IMG/M
3300032276|Ga0316188_10194575All Organisms → cellular organisms → Bacteria → Proteobacteria1023Open in IMG/M
3300033429|Ga0316193_11415248All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria552Open in IMG/M
3300033481|Ga0316600_10984844Not Available597Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment22.69%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater11.76%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine10.08%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands7.56%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment7.56%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow5.88%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface4.20%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.36%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment3.36%
SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Sediment2.52%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.68%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment1.68%
MarineEnvironmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine1.68%
SeawaterEnvironmental → Aquatic → Marine → Gulf → Unclassified → Seawater1.68%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.84%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.84%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.84%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.84%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.84%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.84%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine0.84%
Hydrothermal Vent Microbial MatEnvironmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Vent Microbial Mat0.84%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.84%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment0.84%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.84%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.84%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.84%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.84%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001372YB-Back-sedEnvironmentalOpen in IMG/M
3300003991Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004008Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordB_D2EnvironmentalOpen in IMG/M
3300004028Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordC_D2EnvironmentalOpen in IMG/M
3300004051Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004056Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D1EnvironmentalOpen in IMG/M
3300004067Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004075Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004150Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005588Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1EnvironmentalOpen in IMG/M
3300005589Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2EnvironmentalOpen in IMG/M
3300005590Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2EnvironmentalOpen in IMG/M
3300005600Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1EnvironmentalOpen in IMG/M
3300005601Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1EnvironmentalOpen in IMG/M
3300005612Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2EnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005920Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2EnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300009030Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N075 metaGEnvironmentalOpen in IMG/M
3300009033Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MGEnvironmentalOpen in IMG/M
3300009075Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009139Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaGEnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010412Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300011122Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, totalEnvironmentalOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300014316Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1EnvironmentalOpen in IMG/M
3300019697Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_3-4_MGEnvironmentalOpen in IMG/M
3300019743Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_3-4_MGEnvironmentalOpen in IMG/M
3300020235Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N075EnvironmentalOpen in IMG/M
3300021514Hydrothermal vent microbial mat bacterial communities from Southern Trench, Guaymas Basin, Mexico - 4869-30-0-1_MGEnvironmentalOpen in IMG/M
3300022308Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24EnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300024338 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_9EnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300024528 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23EnvironmentalOpen in IMG/M
3300024529 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21EnvironmentalOpen in IMG/M
3300025883Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11 (SPAdes)EnvironmentalOpen in IMG/M
3300025895Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027790Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes)EnvironmentalOpen in IMG/M
3300027828Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027837 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3EnvironmentalOpen in IMG/M
3300027845Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027858Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027967Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027975Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027997 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_6EnvironmentalOpen in IMG/M
3300028598Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300031727Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5Host-AssociatedOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032231Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1EnvironmentalOpen in IMG/M
3300032257Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyriteEnvironmentalOpen in IMG/M
3300032260Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrowEnvironmentalOpen in IMG/M
3300032262Coastal sediment microbial communities from Maine, United States - Cross River sediment 1EnvironmentalOpen in IMG/M
3300032272Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrowEnvironmentalOpen in IMG/M
3300032276Coastal sediment microbial communities from Maine, United States - Phippsburg worm burrow 1EnvironmentalOpen in IMG/M
3300033429Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2EnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
YBBDRAFT_106929613300001372Marine EstuarineIIRFDQLEGNRVSWCLTPDEAVGQTISLNLIDLAECGAPLAALGIRALWKLCVDGLIYNALEQANGIQEAVSKRLAAAPLPTLIERVPEGATIN*
Ga0055461_1022798413300003991Natural And Restored WetlandsMSDERVLCSHVLTIRFDQLEDNRVNWYVVPDDKIGQTGGLSLIDLAECRAPLAAMGIRALWKICVDGLVYHALEQANDIQVEVGRRLATG
Ga0055446_1022209813300004008Natural And Restored WetlandsMSDERVLCSHFLNIRFDQLEDNRVNWYVEPDDKVGQSGGLSLIDLAECKAPLAAMGVRALWKMCVDGLVYHALEQANDIQVEVGRRLGVGPVEALMDLEHEGMTIN*
Ga0055447_1021773423300004028Natural And Restored WetlandsMSDERVLCSHFLTIRFDQLEDNRVNWYVEPDDKVGQSGGLSLIDLAECKAPLAAMGVRALWKICVDGLVYHALEQANDIQVEVGRRLGVGPVEALMDLEHEGMTIN*
Ga0055492_1019277713300004051Natural And Restored WetlandsMSEEKVLCSHELVIRFDQLEGNRVNWYVLPDDTIRETIELSLIDLAECNAPLAALGIRALWKLCRDGLVFHALEQANDLQVEVGKRLVAGPVEALMDLAP
Ga0055478_1009526013300004056Natural And Restored WetlandsMSDEKVMCSHVLTIRFDQLEDNRVNWYVEPDDKIGQAGGLSLIDLAECRAPLAAMGIRALWKICVDGLVYHALEQANDIQVEVGRRLATEPAEAPLELVPEGVTIN*
Ga0055485_1011798513300004067Natural And Restored WetlandsMSDERVLCSHVLTIRFDQLEDNRVNWYVEPDDRIGQTGDLSLIDLAECRAPLAAMGIRALWKICVDGLVYHALEQANDIQVEVGRRLATG
Ga0055519_1010513513300004075Natural And Restored WetlandsMSDERVLCSHVLTIRFDQLEDNRVNWYVVPDDRIGQTGGLSLIDLAECRAPLAAMGIRALWKICVDGLVYHALEQANDIQVEVGRRLATGPAEAALELVP
Ga0055584_10025148623300004097Pelagic MarineMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLRARDLSLIDLAERGTPLSALGIRALWKLCVDGLVFNSLEQADSIRSEVGKRQVSGPPLIDSEVVPEGVSIN*
Ga0055520_1011671813300004150Natural And Restored WetlandsMSDERVLCSHVLTIRFDQLEENRINWYVQPDEQVRATLPLSLIDLAECDAPLAAMGIHALWKLCVDGLVFNALEQANGIQAAVGKRLSAIET
Ga0055520_1012563613300004150Natural And Restored WetlandsKVLCSHELVIRFDQLEDNRVNWYVVPDEKIRQTQSLSLIDLAESGAPLAAMGIRALWKLCRDGLVYNALEQANDTRVEVNRRLATGPVEALMELAPEGVTIN*
Ga0070728_1065608613300005588Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAECGAPLSALAIRALWKMCIDGLVFNSLEQANSINVDIRKRLVAGPVVAELDLAPEGVTIN*
Ga0070729_1011346413300005589Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINVDIRKRLVAGPVVAELDLGPGGVTIN*
Ga0070729_1072724223300005589Marine SedimentMSEERVVCSHHLSIRFDQLEGNRVNWYVEPDDEILNTQGLSLIDLAEYGAPLAALGIRALWKLCMDGLVFNSLEQANSIQSEVSKRLVS
Ga0070727_1007981123300005590Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINVDIRKRLVAGPVVAELDLAPEGVTIN*
Ga0070726_1019060813300005600Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDNVWETQSLSLIELAECGAPLSALAIRALWKLCMDGLVFNSLEQANSINFDVSKRLLSGPVVAESDLAPEGVTIN*
Ga0070722_1009256513300005601Marine SedimentMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLKAHGLSLIDLAECGAPLAALGIRALWKLCMDGLVFNALEQANSIQSEVGKRLVSGPPLIDSEVVPEGVSIN*
Ga0070722_1012576013300005601Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN*
Ga0070723_1012821913300005612Marine SedimentMSEENVLCSHELVIRFDQLENNQVTWYVLPDEKVLETRSLSLIDLAECGAPLAALGIRALWKLCVDGLVYNSLEQANSIQMEVGKRLVSGPVEAPLEFDTTSKNGRSSLRSRIFLVI*
Ga0070723_1038883613300005612Marine SedimentMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLRTRDLSLIDLAERGTPLSALGIRALWKLCMDGLVFNSLEQANSIQSEVGKRLVSGPPLVEPEVVPEGVSIN*
Ga0070723_1055374613300005612Marine SedimentMSEEKVLCSHELVIRFDQLENNQVNWYVLPDEKVLNTQSLSLIDLAECRAPLSAMGIRALWKLCADGLVYNSLEQASSIQSEVGKRLVSG
Ga0070723_1059302913300005612Marine SedimentTMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLKAHGLSLIDLAECGAPLAALGIRALWKLCMDGLVFNALEQANSIQSEVGKRLVSGPPLIDSEVVPEGVSIN*
Ga0074470_1132785633300005836Sediment (Intertidal)MSEENVLATYELIIRFDQLEGNQVNWYLAPDEAVGQTISLNLIDLAECGAPLAALGIRALWKLCVDGLIYNALEQANGIQEAVSKRLAAAPLPTLIERVPEGATIN*
Ga0070725_1014358923300005920Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN*
Ga0099972_1248565123300006467MarineDQLEGNRVNWYVEPDDEVLRAQGLSLIDLAECGAPLPALGIRALWKLCMDGLIFHSLEEANSINKEVSKRLLSGPVQAQLDLAPEGATIN*
Ga0099972_1335485523300006467MarineMSEERVVCSHHLSIRFDQLEGNRVNWYVEPDDEILNTQGLSLIDLAEYGAPLAALGIRALWKLCMDGLVFNSLEQANSIQSEVSKRLVSGPPLVEPEVVP
Ga0099972_1349486713300006467MarineMSEENVLCSHELVIRFDQLENNQVTWYVLPDEKVLETRSLSLIDLAECGAPLAALGIRALWKLCVDGLVYNSLEQANSIQSEVGKRQVSGPVVAPLDLAPEGVTIN*
Ga0114950_1001968573300009030Deep SubsurfaceMSNDKVLCSHELTIRFDQIEDNQVQWRVIPDADVLETVERSLIDLAECGVPLSLMGIRALTKLCQDGLVFNALEQAHSIKLEVAKRQVAGPVHADLDLIPEGVTIN*
Ga0114950_1007401623300009030Deep SubsurfaceMSNEKVLCSNVLTIRFDQLEDNKVNWYLEPDDGIFETQNLSLIDMAERGAPLSAIAIRVLWKLCFDGLVFNSLEQADSIRYEVCKRIAAGRVHADPDLVPEGVTIN*
Ga0114950_1097710913300009030Deep SubsurfaceMSNEKVLCSHELTIRFDQLEDNRVNWYITPDDDVWKTQGLSLIGLAECGAPLSALGIRALWKLCKDGLVYNSLEQADSIKSEVSKRLVSNPDSTALEALPEGVTIN*
Ga0102956_117787623300009033SoilMSDERVLCSHVLTIRFDQLEGNRVNWYIEPDEPIWQTRSLSLIDLAECEAPLAALGIRALWKLCADGLVYHALEQANGIQVEVGKRLA
Ga0105090_1024717913300009075Freshwater SedimentMSAERVLCSHHLVIRFDQLEDNCVNWYVTPDEKVWETRSLSLIDLAECGAPLAALAIRALWKLCLDGLIHNALEQANEINAEVGKRLASGPVEALLDLAPEGATIN*
Ga0114949_1170344313300009139Deep SubsurfacePGRADLNFRLQGALKSAAKRRNTMSEDKVLWFHELTIRFDQIEDNQVQWRVIPDADVLETVERSLIDLAECGAPLSLMGIRALTKLCQDGLVFNALEQAHSIKLEVAKRLVAGPVHADLDLIPEGVTIN*
Ga0113563_1150361213300009167Freshwater WetlandsMSEEKVLCSHQLVIRFDQLQGNSVNWYVTPDEAVGNTQSLSLVDLAECGAPLAAMGIRALWKLCLDGLIFNALEQANSIQVEVGKRLVAGPVQASLDLAPEGVTIN*
Ga0123573_1132727423300009509Mangrove SedimentMSDETVLCSHVLTIRFDQLEDNRVNWYVTLDEPLRKTRALSLFELAECGAPLAALGIRALWKLCTDGLVYNALEQANDTQVEVNRRLAIGPVEAPLDLLPEGATIN*
Ga0123573_1134019913300009509Mangrove SedimentVSEEKVLCSHQLVIRFDQHEGNRVTWYVTPDEAVCQTQTLSLIDLAECGAPLAAMGIRALWKLCADGLVFNALEQANDVQVEVGKRVATTPAELSLELAPDSVMIN*
Ga0123573_1164940413300009509Mangrove SedimentMSDDKVLCSHTLTIRFDQLEDNRVNWYLEPDDQTLSTGTWSLIDLAECGAPLAVMGIRALWKLCADGLVYNALEQANETLGEVSRRLATEPGEDLALLVPRSQTIN*
Ga0118731_10019594623300010392MarineVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKLCMDGLVFNSLEQANSINFDVSKRLVSGPVVAESDLAPEGVTIN*
Ga0118731_10385729123300010392MarineMSEEKVLCSHELVIRFDQLENNQVNWYVLPDEKVLNTQSLSLIDLAECRAPLAAMGIRALWKLCADGLVYNSLEQASSIQSEVGKRLVSGPVEAPLELAPEGVTIN*
Ga0118731_10405526113300010392MarineTMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN*
Ga0118731_10476626813300010392MarineNTMSEERVVCSHHLSIRFDQLEGNRVNWYVEPDDEVLRAQGLSLIDLAECGAPLSALGIRALWKLCMDGLVFNSLEQANSIQSEVGKRLVSGPPLVEPEVVPEGVSIN*
Ga0118731_10637182623300010392MarineMSEERVICSHHLSVRFEQLEGNRVNWYVEPDDEVLKAYGLSLIDLAERGAPLSALGIRALWKLCIDGLVFNALEQANSIQSEVSKRLVSGPPLIDSEVVPEGVSIN*
Ga0118731_10982125713300010392MarineMSNEKVLCSHELVVRFDQHEGNRVTWYITPDEEVSETLSLSLIDLAECGAPLAALGIRALWKLCMDGLIYNSLEQANDINFEVAKRLESGRVKAPLDLLPESVTIN*
Ga0118731_11038951913300010392MarineMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLRTRDLSLIDLAERGTPLSALGIRALWKLCADGLVFNSLEQANSIQSEVSKRLVSGPPLIDSEVVPEGVSIN*
Ga0118731_11092327533300010392MarineLSTSLQGVFKMLLKRRNTMSEEKVLCSNFLTIRFDQLEDNRITWYVTPDERVANSETLSLIDLAECGAPLSAIGIRALWKLCIDGLVFNSLEQANSIQVEVGKRIALGPVDEILEQVPEGALIN*
Ga0118731_11502412943300010392MarineMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAECGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVSGPAVAELDLAPEGVTIN*
Ga0136852_1040405113300010412Mangrove SedimentMSDEEVLCCHVLTIRFDQLEDNRVNWYVTLDEPLRKTGALSLFELAESGAPLAALGIRALWKLCADGLVYNALEQANDTQVEVNK
Ga0136852_1046871723300010412Mangrove SedimentMSDERILCSHVLTIRIDQLEGNRVNWYIEPDEPIWETRSLSLIDLAECQAPLAALGIRALWKLCADGLVYHALEEANGIQVEVGKRLAAGPHEVDGDWEDLLGAPEGAALN*
Ga0136852_1054299823300010412Mangrove SedimentLQGVLLNAAKEEKTMSDETVLCSHVLTIRFDQLEDNRVNWYVTLDEPLRKTGALSLFELAECGAPLAALGIRALWKLCADGLVYNALEQANDTQVEVNKRLVSGPVEAPLGLLPEGATIN
Ga0136852_1114150613300010412Mangrove SedimentLQGALQSAAKEEKAMSDEEVLSSHHLTIRFDQLEGNRVKWYVEPDQRVADSQALSLLDLAECGAPLAALGIRALWKLCIDGLIFNALEQANDMQVEVDKRLAAGPIESSLQLAPAGVTIN
Ga0136852_1122357913300010412Mangrove SedimentMNDEEVLCSHQLVIRFDQHEGNRVTWYVTPDEAVCQTQSLSLIDLAECGAPLAAMGIRALWKLCADGLVYNALEQANDVQVEVGKRLHGGQSAALMDLEPESLAIN*
Ga0136852_1165123613300010412Mangrove SedimentMSDDKVLCSHTLTIRFDQLEDNRVNWYLEPDDQTLSTRTWSLIDLAECGAPLAVMGIRALWKLCADGLVYNALEQANETLGEVSRRLATEPGEDRALLVPSSQTIN*
Ga0118733_10025091743300010430Marine SedimentMSEEKVLCSNFLTIRFDQLEDNRITWYVTPDENVANSETLSLIDLAECGAPLSAIGIRALWKLCIDGLVFNSLEQANSIQVEVGKRIALGPVDEILEQVPEGALIN*
Ga0118733_10117483833300010430Marine SedimentRFEQLEGNRVNWYVEPDDEVLKAYGLSLIDLAERGAPLSALGIRALWKLCIDGLVFNALEQANSIQSEVSKRLVSGPPLIDSEVVPEGVSIN*
Ga0118733_10134798813300010430Marine SedimentMSEEKVLCSNVLTIRFDQLEDNRVNWYVEADDAIRETQSLSLIDLAECGAPLSALGIRALWKLCIDGLVFNALEQANSINFDVSKRLVSGPVVAELDLAPEGVTIN*
Ga0118733_10176797713300010430Marine SedimentMSEERAICSHHLSIRFEQLEGNRINWYVEPDDEVLRARDLSLIDLAECGAPLSALGIRALWKLCVDGLVFNSLEQANSINFEVKKRIALGPGQAKLDLVPEGVTIN*
Ga0118733_10271753823300010430Marine SedimentMSEEKVLCSNFLTIRFDQLEDNRITWYVTPDERVANSETLSLIDLAECGAPLSAIGIRALWKLCIDGLVFNSLEQANSIQVEVGKRIALGPVD
Ga0118733_10400858123300010430Marine SedimentDQLENNQVSWSVLPDEKILETRSLSLIDLAECGAPLAAMGIRALWKLCVDGLVYNSLEQANSIQSEVGKRQVSGPVVAPLDLTPEGATIN*
Ga0118733_10585662813300010430Marine SedimentKALKRRNTMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDNVWETQSLSLIELAECGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVSGPAVAELDLAPEGVTIN*
Ga0118733_10608046923300010430Marine SedimentMSEERVICSHHLSIRFEQLEGNRVNWYVEPDDEVLKAMGLSLIDLAERGAPLSALGIRALWKLCTDGLVFNALEQANSIQSEVSKRLVSGP
Ga0118733_10645944313300010430Marine SedimentKALKRRNTMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN*
Ga0118733_10801218023300010430Marine SedimentFDQLEDNRVNWYVNPDDKVWDTQELSLVDLAECGAPLAAMGIRALWKLCVDGLVYNSLEQANSIQVEVGRRLTIDPAEAMLDQVPEGVTVN*
Ga0114922_1166710013300011118Deep SubsurfaceLCSHELVIRFDQLENNQVSWSVLPDEKVLETRSLSLIDLAECGAPLTALGIRALWKLCVDGLVYHSLEQASSIRSEVGKRQVSGPVVAPLDLAPEGVTIN*
Ga0151656_11012113300011122MarineMNDDKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAGGGSPLSALAIRALWQMCLDGLVFDSLEQANSINFDVSKRFVAGPVVAELDLAPEGVTIN*
Ga0164320_1024717813300013098Marine SedimentMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLRARSLSLIDLAERGTPLSALGIRALWKLCADGLVFNALEQADSIRSEVGKRQVSGPPLIDSEVVPEGVSIN*
Ga0164320_1051034523300013098Marine SedimentIRFDQMEGNRVNWYVEPDDEVLETQTSSLIDLAERGAPLSALGIRALWKLCMDGLVFNSLEQANSINVEVHKRIATGPVHAELDLVPEGVTIN*
Ga0164313_1001780843300013101Marine SedimentMNDEKVLCSNTLTIRFDQLEDNRVNWYVEPDDKVFETQALSLIELAECGAPLSSLGIRALWKLCMDGLVFNALEQANSINFDVSKRLVAGPVVAELELAPEGVTIN*
Ga0164313_1042394023300013101Marine SedimentMNDEKVLCSNTLTIRFDQLEDNRVNWYVEPDDKVFESQALSLIELAECGAPLSALGIRALWKLCMDGLVFNALEQANSINSDVSKRLVAGPVVAELDLAPEGATIN*
Ga0075339_112966113300014316Natural And Restored WetlandsMSEEKVLCSHELVIRFDQLEDNRVNWYVVPDEKIRQTRSLSLIDLAESGAPLAAMGIRALWKLCRDGLVYNALEQANDTQVEVNRRLATGPVEALMELAPEGVTIN*
Ga0194007_101133123300019697SedimentMSDEKVLCSHVLTIRFDQLEDNRVNWYIQPDETVRQVLSLSLIDLAESGAPLAAMGIRALWKLCRDGLVYNALEQANDTQVEVSKRLAVGPVEALMDLTPESLAIN
Ga0193992_104031513300019743SedimentMSDERVLCSHVLTIRFDQLEGNRVNWYIEPDEQVHTTQTLSLIDLAECGAPLAAMGIRALWKLCADGLVYNALEQANDVQVEVGKRLAAGPMEAPLELAPEGATIN
Ga0212228_1132449283300020235SedimentMSNEKVLCSNVLTIRFDQLEDNKVNWYLEPDDGIFETQNLSLIDMAERGAPLSAIAIRVLWKLCFDGLVFNSLEQADSIRYEVCKRIAAGRVHADLDLVPEGVTIN
Ga0212228_122657123300020235SedimentMSEDKVLCSHELTIRFDQFEDNQVQWRVIPDADVLETVERSLIDLAECGAPLSLMGIRALTKLCQDGLVFNALDQAHWIKLEVAKRQVAGPVYAELDLMPEGVTIN
Ga0212228_132833123300020235SedimentMSNDKVLCSHELTIRFDQIEDNQVQWRVIPDADVLETVERSLIDLAECGVPLSLMGIRALTKLCQDGLVFNALEQAHSIKLEVAKRQVAGPVHADLDLIPEGVTIN
Ga0190293_108800513300021514Hydrothermal Vent Microbial MatMNDEKVLCSNTLTIRFDQLEDNRVNWYVEPDDNVFENQALSLIELAECEAPLSALGIRALWKLCMDGLVFNALEQANSINFDVSKRLVAGPVVAELELAPEGATIN
Ga0224504_1029700523300022308SedimentMSEEKVLCSHELVIRFEQLEGNRITWYIEPDKKICDTQELSLVDLVECGAPLAAIGIRALWKLCADGLIYSSLEQANSIQSDVIKRLDSDPVEKLMDAIPEGATIN
(restricted) Ga0233411_1018831813300023112SeawaterMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAECGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN
(restricted) Ga0255039_1011029913300024062SeawaterMSEEKVLCSNVLTIRFDQLEDNRVNWYLEPDDNVLETQALSLVDLAERGAPLSALGIRALWKLCIDGLVFNSLEQANSINVDVHKRIATGPVQ
(restricted) Ga0255039_1038965213300024062SeawaterMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVSGPVVAELDLAPEGVTIN
(restricted) Ga0255043_1028972723300024338SeawaterMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVSGPVVAELDLAPEGVTIN
(restricted) Ga0255043_1029611123300024338SeawaterMSEERVVCSHHLTIRFDQLEGNRVNWYVEPDDEVLRARDLSLIDLAERGTPLSALGIRALWKLCVDGLVFNSLEQADSIRSEVGKRQVSGPPLIDSEVVPEGVSIN
(restricted) Ga0255046_1026156613300024519SeawaterMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVSGPVVAELDTAPEGVTIN
(restricted) Ga0255046_1051295213300024519SeawaterMSEERVVCSHHLTIRFDQLEGNRVNWYVEPDDEVLRARDLSLIDLAERGIPLSALGIRALWKLCIDGLVFNSLEQANSIQSEVGKRLVSGPPLIDSEAVPEGVSIN
(restricted) Ga0255045_1010933923300024528SeawaterMSEEKVLCSNVLTIRFDQLEDNRVNWYLEPDDNVLETQALSLVDLAESGAPLSALGIRALWKLCIDGLVFNSLEQANSINVDVHKRIATGPVQAELDLVPEGVTIN
(restricted) Ga0255045_1019789013300024528SeawaterMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLRARDLSLIDLAERGTPLSALGIRALWKLCIDGLVFNSLEQADSIRSEVGKRQVSGPPLIDSEVVPEGVSIN
(restricted) Ga0255045_1046786313300024528SeawaterMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVS
(restricted) Ga0255044_1008113923300024529SeawaterMSEEKVLCSNVLTIRFDQLEGNRVNWYVEPDDVVLETQTSSLIDLAERGAPLSALGIRALWKLCVDGLVFNSLEQANSINVEVHKRIAQGPVHADLDLVPEGVTIN
(restricted) Ga0255044_1014992613300024529SeawaterEGNRVNWYVEPDDEVLRARDLSLIDLAERGTPLSALGIRALWKLCVDGLVFNSLEQADSIRSEVGKRQVSGPPLIDSEVVPEGVSIN
(restricted) Ga0255044_1018193813300024529SeawaterMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAECGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN
Ga0209456_1006789433300025883Pelagic MarineMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLNTQGLSLIDLAECGAPLAALGIRALWKLCMDGLVFNALEQANSIQSEVSKRLISGPPLIDSEVVPEGVSIN
Ga0209456_1010998723300025883Pelagic MarineMNDEKVLCSNVLTIRFEQLEDNRVNWYVEPDDKVWETQSLSLIELAECGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVSGPVVAELDLAPEGVTIN
Ga0209567_1018819713300025895Pelagic MarineMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDNVWETQSLSLIELAESGAPLSALAIRALWKLCMDGLVFNSLEQANSINFDVSKRLVSGPVVAEQIRIGTVEPSWTNTKVE
Ga0209273_1017065423300027790Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLLSGPVVAESDLAPEGVTIN
Ga0209692_1006586233300027828Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINVDIRKRLVAGPVVAELDLAPEGVTIN
(restricted) Ga0255041_1000827313300027837SeawaterNVLTIRFDQLEDNRVNWYLEPDDNVLETQALSLVDLAESGAPLSALGIRALWKLCIDGLVFNSLEQANSINVDVHKRIATGPVQAELDLVPEGVTIN
(restricted) Ga0255041_1037118723300027837SeawaterMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAECGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVSGPVVAESDLAPEGVTIN
Ga0209271_1004773523300027845Marine SedimentMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDDEVLKAHGLSLIDLAECGAPLAALGIRALWKLCMDGLVFNALEQANSIQSEVGKRLVSGPPLIDSEVVPEGVSIN
Ga0209271_1007951933300027845Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAECGAPLSALAIRVLWKLCMDGLVFNSLEQANSINFDVSKRLVSGPVVAELDLAPEGVTIN
Ga0209013_1009448733300027858MarineMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETRSLSLIELAECGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVSGPVVAELDLAPEGVTIN
Ga0209013_1036317323300027858MarineMSEERVVCSHHLSIRFDQLEGNRVNWYVEPDDEVLRDRGLSLIDLAERGAPLSALGIRALLKLCIDGLVFNSLEQANSIQSEVGKRLVSGPPLIDSEVVPEGVSIN
Ga0209536_10006209443300027917Marine SedimentMSEEKVLCSHELVIRFDQLEGNRVNWYVLPDDTIRETIELSLIDLAECNAPLAALGIRALWKLCRDGLVFHALEQANDLQVEVGKRLVAGPVEALMDLAPSEGVTIN
Ga0209272_1012853513300027967Marine SedimentMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKMCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN
Ga0209391_1012889213300027975Freshwater SedimentMSAERVLCSHHLVIRFDQLEDNCVNWYVTPDEKVWETRSLSLIDLAECGAPLAALAIRALWKLCLDGLIHNALEQANEINAEVGKRLASGPVEALLDLAPEGATIN
(restricted) Ga0255057_1018125123300027997SeawaterMSEERVICSNELTIRFDQLEDNRVNWYIVPDDAILETQELSLIDLAECGAPLSALGIRALWKLCMDGLVFNSLEQANSIRFEVCKRLAVGPAPAELETVPEGVSIN
(restricted) Ga0255057_1033477023300027997SeawaterMSEEKVLCSHELVIRFDQLENNQVNWYVIPDEKVLKTQSQSLIDLAECGAPLAAMGIKALWKLCADGLVYNSLEQANSIQMEVGKRLVSGPVEAPLELAPEGVTIN
Ga0265306_1034906023300028598SedimentMSNEKVLCSHELVIRFDQHADNRVSWHVIPDEEVQNSQDLSLTDLAECNAPLAALGIRALWKLCMDGLIFNSLEQANSIQVDVERRIASRPVSEVRELPPEGVTIN
Ga0316576_1074339513300031727RhizosphereMSDDKVLSSHVLTIRFDQLEGNRVNWYLQPDEQVLNTRSLSLIDLAECGAPLAALGIRALWKLCEDGLVFNSLEQANDIQVEVSKRLVSESVQAPLDLVPENATIN
Ga0315268_1009204453300032173SedimentMSEENVLGSYELVIRFDQLENNMVNWYIRPDETLEKTISLSLIDLAERGAPLAAMGIRALWKLCRDGLIYHALEQANDINVEVGKRQVGGPVTALLDRAPEGVTIN
Ga0316187_1003976743300032231Worm BurrowMSEERVVCSHHLSIRFEQLEGNRVNWYVEPDVEVLSARDLSLIDLAERGTPLSALGIRALWKLCVDGLVFNSLEQADSIRSEVGKRQVSGPPLIDSEVVPEGVSIN
Ga0316187_1068655923300032231Worm BurrowMSEEKVICSHELVIRFDQLEGNRVNWYVKPDEKIRETQSLSLIDLAECNAPLAAIGIRALWKLCRDGLIFSALEQANDTQVEVGRRLASGPVEALMDLAPQDVTIN
Ga0316205_1016489823300032257Microbial MatMSKDKVLCSHELIVQIDQLEGNRVNWRVIPDEDVWNTHSLSLIDLAESGAPLSAMGIRALWKLCLDGLIYNSLEQANSIQADVDRRMAAPASHAALEVPPDGATIN
Ga0316192_1024510833300032260Worm BurrowMSEERVVCSHNLSIRFEQLEGNRVNWYVEPDDEVLRARDLSLIDLAERGTPLSALGIRALWKLCVDGLVFNSLEQADSIRSEVGKRQVSGPPLIDSEVVPEGVSIN
Ga0316192_1105921113300032260Worm BurrowIRFDQLEDNRVNWYVEPDDKVWETQSLSLIELAESGAPLSALAIRALWKLCIDGLVFNSLEQANSINFDVSQRLVAGPVVAELDLAPEGVTIN
Ga0316194_1014165833300032262SedimentMSEEKVLCSHELVIRFEQLEGNRITWYIEPDKKVCDTQGLSLVDLAECGAPLAAIGIRALWKLCADGLIYSSLEQANSIQSDVIKRLDSDPVEKLMDAIPEGATIN
Ga0316189_1057153713300032272Worm BurrowMSEEKILCSNYLTIRLDQLEGNRVNWYLIPDEKVKQTESLSLIDLAECGAPLSAMAIRALWKLCADGLVYNSLEQANSIETEIGKRLASDSYDNAQSGALEGVTIN
Ga0316189_1083565813300032272Worm BurrowMNDEKVLCSNVLTIRFDQLEDNRVNWYVEPDEIVWETRSLSLIELAECGARLSALAIRALWKLCIDGLVFNSLEQANSINFDVSKRLVAGPVVAELDLAPEGVTIN
Ga0316188_1019457523300032276Worm BurrowMSEEKVLCSHELVIRFDQLEGNRVNWYVVPDEKIRQSQSLSLIDLAESGAPLAAMGIRALWKLCRDGLVYNALEQANDTQVEVNRRLATGPVEALMELAPGGVTIN
Ga0316193_1141524813300033429SedimentMSEEKVLCSHELVIRFDQLEGNRVNWYVVPDEKIRQSQSLSLIDLAESGAPLAAMGIRALWKLCRDGLIYNALEQANDTQVEVNRRLATGPVEALMDLAPEGVTIN
Ga0316600_1098484423300033481SoilMSDEEVLCSHELVIRFDQHQGNRVTWYVTPDEEVGHTESLSLIDLAECGAPLSALGIRALWKLCVDGLVYNSLEQANSIQSEVGKRMARPVPGVELELPPDGVTIN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.