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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F075178 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 119 |
| Average Sequence Length | 61 residues |
| Representative Sequence | MTDYNIGPGVQQAMADAGDEPRSDEQFIILEPGHKISQTFGRDAVYWYYEEDNATRRVPF |
| Number of Associated Samples | 80 |
| Number of Associated Scaffolds | 119 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 69.75 % |
| % of genes near scaffold ends (potentially truncated) | 22.69 % |
| % of genes from short scaffolds (< 2000 bps) | 71.43 % |
| Associated GOLD sequencing projects | 73 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.81 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (75.630 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.328 % of family members) |
| Environment Ontology (ENVO) | Unclassified (36.134 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (55.462 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 7.95% β-sheet: 26.14% Coil/Unstructured: 65.91% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.81 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 119 Family Scaffolds |
|---|---|---|
| PF01391 | Collagen | 1.68 |
| PF01510 | Amidase_2 | 1.68 |
| PF14659 | Phage_int_SAM_3 | 1.68 |
| PF06737 | Transglycosylas | 0.84 |
| PF00589 | Phage_integrase | 0.84 |
| PF05065 | Phage_capsid | 0.84 |
| PF11752 | DUF3309 | 0.84 |
| PF08774 | VRR_NUC | 0.84 |
| PF04233 | Phage_Mu_F | 0.84 |
| PF01507 | PAPS_reduct | 0.84 |
| PF00847 | AP2 | 0.84 |
| PF14216 | DUF4326 | 0.84 |
| PF07508 | Recombinase | 0.84 |
| PF00041 | fn3 | 0.84 |
| PF00145 | DNA_methylase | 0.84 |
| PF01541 | GIY-YIG | 0.84 |
| PF13481 | AAA_25 | 0.84 |
| COG ID | Name | Functional Category | % Frequency in 119 Family Scaffolds |
|---|---|---|---|
| COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 0.84 |
| COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 0.84 |
| COG4653 | Predicted phage phi-C31 gp36 major capsid-like protein | Mobilome: prophages, transposons [X] | 0.84 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 75.63 % |
| All Organisms | root | All Organisms | 24.37 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 19.33% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 16.81% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 10.08% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 5.04% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 5.04% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.20% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.20% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.20% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 3.36% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.52% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.52% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.52% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.52% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 1.68% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.68% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.68% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.68% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.84% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 0.84% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.84% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.84% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.84% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.84% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.84% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.84% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.84% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.84% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.84% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.84% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.84% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
| 2170459003 | Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm | Environmental | Open in IMG/M |
| 2199352025 | Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL | Environmental | Open in IMG/M |
| 3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000550 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly | Environmental | Open in IMG/M |
| 3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300002899 | Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607) | Environmental | Open in IMG/M |
| 3300004281 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
| 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006577 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009157 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 | Environmental | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
| 3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
| 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026694 | Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized - NN611 (SPAdes) | Environmental | Open in IMG/M |
| 3300027646 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes) | Environmental | Open in IMG/M |
| 3300027675 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027821 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
| 3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
| 3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031981 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25 | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| SwRhRL2b_0530.00001210 | 2162886007 | Switchgrass Rhizosphere | MTDYTIGVGVAQAIADAGDEPRSDEQYVIFDEGHKISQTYGRDAIYWYVEEDNAVRRVPF |
| E4A_08430760 | 2170459003 | Grass Soil | RFGPGVAQAMADHGDEPRSDENFIVLREGDKISQTFGRDAQYFWMERDNVVQRSPF |
| deepsgr_01586050 | 2199352025 | Soil | MADFNVGPGVAQAIADNNDEARSDEQFIILADGDKVSQTFARDAIYYWIERDNSVKRSPF |
| ICChiseqgaiiDRAFT_22070303 | 3300000033 | Soil | MTDSYVIGPGVAQAIADHGDEPRSDEQYVILEPGEKISQTFARDAVYYWIERDNAVKRLPF* |
| INPhiseqgaiiFebDRAFT_1057755632 | 3300000364 | Soil | MADYVIGPGVAQAISDSGDEPRSDEQFIILEPGHKISQTFGRDAVYWYYEEDNATRRLPF |
| F24TB_101241582 | 3300000550 | Soil | MTDFVVGPGVAQAIAESGDEARSDEQFVIVEPGHKVSQTFGRDAIYYWLEEDNSTRRVPF |
| F14TC_1002965063 | 3300000559 | Soil | MTDFVVGPGVAQAIAESGDEARSDEQFVIVEPGHKVSQTFGRDAIYYWIERDNSVKRSPF |
| F14TC_1012168283 | 3300000559 | Soil | MTDWVIGPGVWQAMADAGDEPRSHEMYIVTEEGHKVSQTIGRDAIYYWVQEDNRTSRTPFR* |
| JGI1027J12803_1084695861 | 3300000955 | Soil | VIGPGVAQAISDSGDEPRSDEQFIILEPGHKISQTFGRDAVYWYYEEDNATRRLPF* |
| F14TB_1021205151 | 3300001431 | Soil | MTDFVVGPGVAQAIAESGDEARSDEQFVIVEPGHKVSQTFGRDAIYYWLEEDNATRRVPF |
| C688J35102_1202948852 | 3300002568 | Soil | MSDWNIGVGVQQAISDAGDEPRSDEQYIVLEPGHKISQTFGRDAVYLYYEEDNATRRNPFR* |
| JGIcombinedJ43975_100054288 | 3300002899 | Soil | MTDFSIGPGVLEAITAANDEPRSDEQYVILDEGHKVSQTFARDAVYYWLEEDNAVRRTPF |
| Ga0066397_100089514 | 3300004281 | Tropical Forest Soil | NSDLPALKEDEVTDYNIGPGVQQAMTDAGDEPRSDEQYIILDPGHKISQTFGRDSVYWYFEEDSAVRRISFPG* |
| Ga0066397_100096161 | 3300004281 | Tropical Forest Soil | RREGACGQAMTYVIGPGVQQAIADAGDEARSDEIAVVTDDEGWKITQTYARDGIYYWLREDNAVRRVPF* |
| Ga0063356_10002423310 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MTEYVIGPGVAQAILDAGDEPRSDEQYVILDPGHKVSQTFGRDGIYWWYEEDNATRRVAF |
| Ga0066395_1000618511 | 3300004633 | Tropical Forest Soil | MTDYNIGPGVQQAMTEAGDEPRSDEQFIILDAGHKISQTFGRDAVYWYYEEDNATRRVPF |
| Ga0066395_100135422 | 3300004633 | Tropical Forest Soil | MTDYNIGPGVQQAMADAGDEPRSDEQFIILEPGHKISQTFGRDAVYWYYEEDNATRRVPF |
| Ga0066395_100198864 | 3300004633 | Tropical Forest Soil | MNTEDTYSIGPGVQQAMADHGDVPRSDEQFVILREGHQISMTFGRDSLYFWLQEDNATRRVPFR* |
| Ga0066395_100501403 | 3300004633 | Tropical Forest Soil | MTDDQHPYSIGIGVQQAMADAGDEPRSDEQFIILLDGHQVSQTFGRDAVYYWLEEDNATKRLPFR* |
| Ga0066395_103850482 | 3300004633 | Tropical Forest Soil | PQMVGDEYVVGPGVLQAMESAGDEPRSDEQFIISIPGHQVSQTFGRDAVYYYYEEDNRTQRLPFR* |
| Ga0066395_108937342 | 3300004633 | Tropical Forest Soil | MDVVYNIGPGVQQAMTDANDEPRSDEQFVILEPGHKISQTFGRDAVYWYY |
| Ga0065704_104574872 | 3300005289 | Switchgrass Rhizosphere | MPSTIYTIGPGVAQAIADSGDEPRSDEQFVILEPGHKVSQTFGRDGVYYYYEEDNATRRVAF* |
| Ga0065704_106540792 | 3300005289 | Switchgrass Rhizosphere | MTDSYVIGPGVAQAISDQGDEPRSDEQYIILEPGEKISQTFARDAIYYWIERDNAVKRLPF* |
| Ga0065705_106913521 | 3300005294 | Switchgrass Rhizosphere | TTMTDSYVIGPGVAQAISDQGDEPRSDEQYIILEPGEKISQTFARDAIYYWIERDNAVKRLPF* |
| Ga0066388_1084149382 | 3300005332 | Tropical Forest Soil | MTEYVIGPGVQNSILEHNDEARSDEQYVVLEPGEKISQTFARDAVYYWLERDNAVRRCPF |
| Ga0070668_1002539971 | 3300005347 | Switchgrass Rhizosphere | CAEGRLVMADYVIGPGVAQAIADNNDEPRSDEQFVILEPGHKVSQTFARDAIYWYYEEDNATRRVSF* |
| Ga0070674_1021698982 | 3300005356 | Miscanthus Rhizosphere | MTDFVVGPGIEQALAEHDDEARSDEQFVILREGEKVSQTFGTLGIYYWMEHDNVVKMSPF |
| Ga0070710_106653672 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MAEFSIGPGVAQAIADNGDEPRSDEQFVILRDGDKISQTFGRDRIYYWIERDNAVRMSPF |
| Ga0070711_1015629162 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MTDDGYSIGPGVQQAMVDAGDEPRSDEQFIILREGHQVSQTFGRDAVYYWVQEDNATRRVPFR* |
| Ga0073909_102976031 | 3300005526 | Surface Soil | MADYVIGPGVAQSIADHQDEPRSDEQFIILEPGEKVSQTIARDAIYYWLERDNATRRVAF |
| Ga0070684_10002276616 | 3300005535 | Corn Rhizosphere | MTDYSIGPGVAQAISDSADEARSDEQYIVLEEGHKISQTFARDAVYYWLQEDNAVRRCPF |
| Ga0066905_1000003149 | 3300005713 | Tropical Forest Soil | VTDYNIGPGVQQAMTDAGDEPRSDEQYIILDPGHKISQTFGRDSVYWYFEEDSAVRRISFPG* |
| Ga0066905_1001291263 | 3300005713 | Tropical Forest Soil | MTYVIGPGVQQAIADAGDEARSDEIAVVTDDEGWKITQTYARDGIYYWLREDNAVRRVPF |
| Ga0068861_10000009122 | 3300005719 | Switchgrass Rhizosphere | MADYVIGPGVAQAIADAGDEPRSDEQFIILQEGRKVSQTFARDAVYYWLQEDNRTNRVPFR* |
| Ga0066903_10000007024 | 3300005764 | Tropical Forest Soil | MDVVYNIGPGVQQAMTDANDEPRSDEQFVILEPGHKISQTFGRDAVYWYYEEDNATRRLPF* |
| Ga0066903_1003914597 | 3300005764 | Tropical Forest Soil | MSDYVIGPGVAEAIAAAGDEARSDEQFVILEEGHKISQTFGRDAVYYYIEEDNRTNRLPFR* |
| Ga0066903_1029637113 | 3300005764 | Tropical Forest Soil | MSEYVIGPGVQQAMADAGDEPRSDEQYIIGTPGHKISQTFGRDAQYFWLEEDNAVRRAPF |
| Ga0066903_1054346461 | 3300005764 | Tropical Forest Soil | MTTDDTTYSIGPGVQQAMADAGDEPRSDEQFIILREGHQISQTFGRDAVYYYVEEDNATRRCPFR |
| Ga0081455_1001782915 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MTDYTVGPGVAQAISDNGDEARSDEQYVILEPGEKVSQTFARDGIYYWIERDNAVRRVPF |
| Ga0070712_1004022143 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTDDGYSIGPGVQQAMVDAGDEPRSDEQFIILREGDKVSQTFGRDFIYYWMERDNAVKMSPF* |
| Ga0070712_1005437923 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | WPTWSASVADYSIGPGVAQAIADNADEPRGDEQFVILREGDKVSQTFARDAIYYWYESENAVKRTPF* |
| Ga0074050_100791203 | 3300006577 | Soil | LGADLVVTDFNVGPGVQQALADNGDEARSDEQFVILLDGDKVSQTFGRDAIYYWIERDNSVKRSPF* |
| Ga0075433_114942972 | 3300006852 | Populus Rhizosphere | MTDYVIGPGVAQAISDNGDEPRSDEQFVILEPGHKISQTFARDAVYWYYEEDNATRRVVF |
| Ga0075425_10000422631 | 3300006854 | Populus Rhizosphere | MDYNIGPGVAQAIADNGDEPRSDEQFVILEPGHKVSQTFARDAIYWYYEEDNATRRVVF* |
| Ga0075425_1000590701 | 3300006854 | Populus Rhizosphere | MTDYVIGPGVAQAISDNGDEPRSDEQFVILEPGHKVSQTFARDAIYWYYEEDNATRRVVF |
| Ga0075425_1011305192 | 3300006854 | Populus Rhizosphere | MADYSVGPGVAQAISDSGDEARSDEQYIVLEEGHKISQTFARDAVYYWLQEDNAVRRCPF |
| Ga0075425_1030268651 | 3300006854 | Populus Rhizosphere | MTDYVIGPGVAQAISDNGDEPRSDEQFVILEPGHKVSQTFARDAIYWYYEED |
| Ga0075434_1009097883 | 3300006871 | Populus Rhizosphere | MTDYVIGPGVAQAISDNGDEPRSDEQFVILEPGLKISQTFARDAVYWYYEEDNATRRVVF |
| Ga0075435_1009003072 | 3300007076 | Populus Rhizosphere | MTDYVIGPGVAQAISDNGDEPRSDEQFVILEEGHKVSQTFGRDAVYYWLQEDNRTNRVPFR* |
| Ga0075435_1012832683 | 3300007076 | Populus Rhizosphere | MSDYVIGPGVAQAIADAGDEPRSDEQFVILEEGHKVSQTFGRDAVYYWLQEDN |
| Ga0111539_100589771 | 3300009094 | Populus Rhizosphere | MPDWNVGPGVAQAIADNGDEARSDEQFVLLTNGDKVSQTFARDAIYYWLERDNAVRRSPF |
| Ga0111539_121490653 | 3300009094 | Populus Rhizosphere | MTDSYVIGPGVAQAISDYGDEPRSDEQYMILEPGEKISQTFARDAIYYWIERDNAVKRLPF* |
| Ga0111539_132952142 | 3300009094 | Populus Rhizosphere | VSDWNVGPGVRIAMEDAGDEARSDEQFILLAEGDKISQTFGRDAIYYWYERDNLVKRSPF |
| Ga0111538_108675413 | 3300009156 | Populus Rhizosphere | VTDYAIGPGVAQAISDYGDEPRSDEQYMILEPGEKISQTFARDAIYYWIERDNAVKRLPF |
| Ga0105092_107010652 | 3300009157 | Freshwater Sediment | MSEYTVGPGVAEAIAAAGDEARSDEQYVILEQGHKVSQTFARDAIYYYLEEDNAVRRCPF |
| Ga0105249_127684032 | 3300009553 | Switchgrass Rhizosphere | VTEYVIGPGVAQAISDSNDEARSDEQYVILEPGEKISQTFARDAVYYWIEKDNAVRRCPF |
| Ga0126374_101989832 | 3300009792 | Tropical Forest Soil | VSEYSIGPGVLQAMADAGDEPRSDEQYVILAEGHKISQTFGRDALYYWLEEDNAVRRAPF |
| Ga0126382_101223891 | 3300010047 | Tropical Forest Soil | MTDYSIGPGVQQAMTDAGDEPRSDEQYIILDPGHKISQTFGRDSVYWYFEEDSAVRRISF |
| Ga0126382_101421542 | 3300010047 | Tropical Forest Soil | MDFTIGPGVAQAMADAGDEPRSDEIYIVNVDGAKVSQTFGRHAVYYWLEEDNAVRRVPF* |
| Ga0126370_100406367 | 3300010358 | Tropical Forest Soil | MSDYSIGPGVQAAMDAAGDEPRSDEQFVILEEGHKISQTFGRDGVYYWLQEDNATRRVPFQ* |
| Ga0126370_118386062 | 3300010358 | Tropical Forest Soil | MAYNIGPGVQQAMADAGDEPRSDEQFLILDEGHKVIQTFGRDGVYYWIEEDNRTSRVPFR |
| Ga0126376_102514354 | 3300010359 | Tropical Forest Soil | YDVYRAPRRTVLTMTDYSIGPGVQQAMTEAGDEPRSDEQFIILDAGRKISQTFGRDAIYWYYEEDNAVRRLPF* |
| Ga0126376_106949092 | 3300010359 | Tropical Forest Soil | VTDTEYSIGPGVQQAIADAGDEPRSDEQFIILREGHQVSQTFGRDAVYYYIQEDNSTRRVPF* |
| Ga0126372_107652362 | 3300010360 | Tropical Forest Soil | MADYVIGPGVAEAIAAAGDEARSDEQFVILEEGHKISQTFGRDAVYYYIEEDNRTNRLPFR* |
| Ga0126377_1001180011 | 3300010362 | Tropical Forest Soil | MTDFNVGPGVQQAMADNGDEPRSDELYVITTEGHKISETYSTGGLYLYYEEDNRVARCPFR* |
| Ga0126377_102112662 | 3300010362 | Tropical Forest Soil | MTEMTFNVGPGVLQAMQDNGDEPRSDELYVITTEGHKVSETYSTGGIYLYYEEDNRTARCPFR* |
| Ga0126377_126344951 | 3300010362 | Tropical Forest Soil | MTEYTIGPGVAQAIADNQDEARSDEQYVILEPGEKISQTFARDGVYYWIEKDNAVRRLPF |
| Ga0126379_1000052633 | 3300010366 | Tropical Forest Soil | MTEYVIGPGVQQAMADAGDEPRSDEQYIIATDGHKISQTFGRDALYYWLEEDNAVRRAPF |
| Ga0126379_100092877 | 3300010366 | Tropical Forest Soil | MDVSYSIGPGVQQAMADAGDVPRSDEQFIILEPGHKVSQTFGRDAVYYWLEEDNATRRCPF* |
| Ga0126379_100368702 | 3300010366 | Tropical Forest Soil | MEQNEAGFVVGPGVAQAMADAGDEPRSDEMYLVLEDGRKISQTFGRAAVYYWLEEDNAVRRVPFE* |
| Ga0126379_100496422 | 3300010366 | Tropical Forest Soil | MSDYNIGPGVQAAMDANSDEPRSDEQFIILEEGHKISQTFGRDAVYYWLQEDNATQRVPFR* |
| Ga0126379_110550802 | 3300010366 | Tropical Forest Soil | MSDVPYSIGPGVQQAMVEAGDEPRSDEQYIILRAGHQISQTFGRDATYYWLEEDNAVNRVPFQR* |
| Ga0126381_1010108304 | 3300010376 | Tropical Forest Soil | ARQSHSGTRGDTIMTDYNVRPGVAQAIADAGDEQRSDEQYIILDEDNKISRTFGRDAIYYYYEADNATRRTPF* |
| Ga0126383_107513592 | 3300010398 | Tropical Forest Soil | MTDGYVIGPGVSEAIAAAGDEPRSDEQYIVLTPGHQISMTFGRDAIYYYYAEDNAVRRVPF* |
| Ga0126383_118655702 | 3300010398 | Tropical Forest Soil | MTDYNIGPGVLAAMTEAQDEPRSDEQFIILDAGHKISQTFGRDAVYWYYEEDNATRRVPFPG* |
| Ga0137382_102198114 | 3300012200 | Vadose Zone Soil | MTDYVIGPGVADAIAQNGDEPRSDEQFVILEEGHKVSQTFARDAVYYWLQEDNRTQRVPFR* |
| Ga0137399_105529602 | 3300012203 | Vadose Zone Soil | MTEFSAGPGIAQAVADAGDELRSDEQYVVLDEGHKISQTYGRDAIYWYYEEDNAIRRVPF |
| Ga0150984_1036487192 | 3300012469 | Avena Fatua Rhizosphere | LMSEYVIGPGVAQAIVDAGDEPRSDEQYIIMAEGHKISQTFGRDAQYFWLEEDNAVRRAPF* |
| Ga0126375_100013457 | 3300012948 | Tropical Forest Soil | MAYNIGPGVQQAMADAGDEPRSDEQFVILDEGHKVSQTFGRDGVYYWIEEDNRTSRVPFR |
| Ga0126375_103430092 | 3300012948 | Tropical Forest Soil | MTDYSIGPGVLAAMTEAQDEPRSDEQFIILDAGHKISQTFGRDAVYWYYEEDNATHRVPFPG* |
| Ga0126369_102101252 | 3300012971 | Tropical Forest Soil | MSDYSIGPGVQQAMADAGDDPRSDEQFVILEEGHKVSQTFGRDAVYYWIEEDNRTNRVPFR* |
| Ga0126369_120766472 | 3300012971 | Tropical Forest Soil | MTDTESTYSIGPGVQTMMASYGDVPRSDEQFIILRNGHQISQTFGRDAMYFWLQEDNATRRVPFR* |
| Ga0157371_101609956 | 3300013102 | Corn Rhizosphere | MTDYSVGPGVQQAMADHGDEPRSDEQFIILVDGDKISQTFGRDATYYWMERDNAVKRSPF |
| Ga0157375_121656061 | 3300013308 | Miscanthus Rhizosphere | VPDWNVGPGVAQAIADNGDEARSDEQFVLLTNGDKVSQTFARDAIYYWLERDNAVRRSPF |
| Ga0157377_103903012 | 3300014745 | Miscanthus Rhizosphere | MTEYAIGPGVQNAIAENGDEPRSDEQYVILDDGHKVSQTFGRDAIYYWIQEDNAVCRSPF |
| Ga0132258_1001264515 | 3300015371 | Arabidopsis Rhizosphere | VSDYVIGPGVAQAMTDSGDEPRSDEQFVILEEGHKISRTYGRDAIYTYYEEDNAVKRLPFR* |
| Ga0132258_103189283 | 3300015371 | Arabidopsis Rhizosphere | MADWSIGPGVAQAIADNSDEARSDEQFIILEPGHKISQTFARDAIYWYYEEDNAVRRVPF |
| Ga0132258_119367103 | 3300015371 | Arabidopsis Rhizosphere | MAEYVIGPGVAQAIADAGDEPRSDEQFIILEPGHKVSQTIGRDALYYYVEEDNRTNRLPFR* |
| Ga0132257_1000782472 | 3300015373 | Arabidopsis Rhizosphere | MDVTYNIGPGVQQAMADAGDEPRSDEQFVILEPGHKVSQTFGRDAVYYYIEEDNATRRCPF* |
| Ga0132257_1046097182 | 3300015373 | Arabidopsis Rhizosphere | METVYSIGPGVAAVMADAGDEPRSDEQFIILEPGHKVSQTIGRDALYYYVEEDNRTNRLPFR* |
| Ga0132255_1040571662 | 3300015374 | Arabidopsis Rhizosphere | MTDFSIGPGVAQAIADHNDEPRSDEQFIILEPGEKVSQTIARDGIYYWLERDNATRRGAF |
| Ga0182036_106782191 | 3300016270 | Soil | PAAQRAGADVSEFSVGPGVQQAMADHGDEPRSDEQFIILREGHKVSMTFSKGGVYYYYEEDNRTQRCPF |
| Ga0182041_109104013 | 3300016294 | Soil | DQQPAAQRAGADVTEFSVGPGVQQAMADNGDEPRSDEQFIILREGHKVSMTFSTGGVYYYYEEDNRTQRCPF |
| Ga0210397_100010881 | 3300021403 | Soil | MTMTEYSVGPGVQAAMDEAGDEPRSDEQFVILTEGHKVSMTYGRDAVYYWYEEDNRTNRLPFG |
| Ga0207688_108216312 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MTEYAIGPGVQNAIAENGDEPRSDEQYVILDDGHKVSQTFGRDAIYYWIQEDNAVRRSPF |
| Ga0207645_101275143 | 3300025907 | Miscanthus Rhizosphere | MTEYVIGPGVAQAISDSNDEARSDEQYVILEPGEKISQTFARDAVYYWIEKDNAVRRCPF |
| Ga0207693_103632633 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MTDDGYSIGPGVQQAMVDAGDEPRSDEQFIILREGDKVSQTFGRDFIYYWMERDNAVKMSPF |
| Ga0207662_1000269211 | 3300025918 | Switchgrass Rhizosphere | MADYVIGPGVAQAISDNGDEARSDEQYVILEPGEKISQTFARDAVYYWIEKDNAVRRCPF |
| Ga0207681_110205841 | 3300025923 | Switchgrass Rhizosphere | MADYVIGPGVAQAIADNNDEPRSDEQFVILEPGHKVSQTFARDAIYWYYEEDNATRRVSF |
| Ga0207659_100251101 | 3300025926 | Miscanthus Rhizosphere | IGPGVQNAIAENGDEPRSDEQYVILDDGHKVSQTFGRDAIYYWIQEDNAVRRSPF |
| Ga0207704_106198283 | 3300025938 | Miscanthus Rhizosphere | MAEYSIGPGVQQAIADNGDEPRSDEQFIILTPGDKVSQTFARDAVYYWIERDNATRRNPF |
| Ga0207667_118335092 | 3300025949 | Corn Rhizosphere | DPVSDYSVGPGVAQSIADHGDEPRSDEQYVILVDGHKVSQTFARDAIYYWIEEDNAVRRSPF |
| Ga0208346_10000211 | 3300026694 | Soil | MSDYIIGPGVAQAIADAGDEPRSDEQYVILEEGHKVSQTFARDAIYYWLQEDNAVRRSPF |
| Ga0209466_10460033 | 3300027646 | Tropical Forest Soil | NSDLPALKEDEVTDYNIGPGVQQAMTDAGDEPRSDEQYIILDPGHKISQTFGRDSVYWYFEEDSAVRRISFPG |
| Ga0209077_100003554 | 3300027675 | Freshwater Sediment | MTDYTIGPGVQQAMIDAGDEPRSDEQYVVLEPGHKVSQTFARDAIYYWIEEDNAVRRAPF |
| Ga0209811_1000012324 | 3300027821 | Surface Soil | MAEWVIGPGVLAAMQDAGDEPRSDEQFVILDEGHKVSQTFGRDAVYWWIQEDNATRRVPF |
| Ga0209811_100014335 | 3300027821 | Surface Soil | MSDYSIGPGVAQAIADNGDEPRSDEQFIILREGDKVSQTFGRDFIYYWMERDNDVKMSPF |
| Ga0209811_100604631 | 3300027821 | Surface Soil | MPDFNVGPGVAQAIADNGDEARSDEQFIILADGDKVSQTFARDAIYYWI |
| Ga0209465_100525733 | 3300027874 | Tropical Forest Soil | MTDDQHPYSIGIGVQQAMADAGDEPRSDEQFIILLDGHQVSQTFGRDAVYYWLEEDNATKRLPFR |
| Ga0209465_100947832 | 3300027874 | Tropical Forest Soil | MNTEDTYSIGPGVQQAMADHGDVPRSDEQFVILREGHQISMTFGRDSLYFWLQEDNATRRVPFR |
| Ga0209465_102530083 | 3300027874 | Tropical Forest Soil | PGVLAAMQEADDEPRSDEQYVILTPGQQISQTFGRDAVYYWLEEDGAVRRVPF |
| Ga0209465_106105331 | 3300027874 | Tropical Forest Soil | MDVVYNIGPGVQQAMTDANDEPRSDEQFVILEPGHKISQTFGRDAVYWYYE |
| Ga0318541_103297663 | 3300031545 | Soil | VSEFSVGPGVQQAMADNGDEPRSDEQFIILREGHKVSMTFSTGGVYYYYEEDNRTQRCPF |
| Ga0318528_104125862 | 3300031561 | Soil | VTEFSVGPGVQQAMADNGDEPRSDEQFIILREGHKVSMTFSTGGVYYYYEEDNRTQRCPF |
| Ga0306925_118693301 | 3300031890 | Soil | QISAVMTDSGEFVVGPGVLQAMEDAGDEPRSDEQFIVMAPGHQVSQTFGRDAVYYYYEEDNRTQRLPFR |
| Ga0318531_105838082 | 3300031981 | Soil | AGADVTEFSVGPGVQQAMADNGDEPRSDEQFIILREGHKVSMTFSTGGVYYYYEEDNRTQRCPF |
| Ga0306924_107416023 | 3300032076 | Soil | MTDYVIGPGVQQAMADAGDEPRSDEQFMILREGHQVSQTFGRDAIYYWLEEDNAVRRCPF |
| Ga0306920_1002686162 | 3300032261 | Soil | VSEFSVGPGVQQAMADHGDEPRSDEQFIILREGHKVSMTFSTGGVYYYYEEDNRTQRCPF |
| Ga0318519_109213531 | 3300033290 | Soil | VTEFSVGPGVQQAMADNGDEPRSDEQFIILREGHKVSMTFSTGGVYYYYEEDN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |