Metagenome / Metatranscriptome Family F075167

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075167
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	59 residues
Representative Sequence	KPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKAKRKVLLVEPATRTVVGEIGG
Number of Associated Samples	103
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	88.24 %
% of genes from short scaffolds (< 2000 bps)	81.51 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.185 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.244 % of family members)
Environment Ontology (ENVO)	Unclassified (40.336 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.899 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.10% β-sheet: 26.19% Coil/Unstructured: 60.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02875	Mur_ligase_C	10.08
PF08245	Mur_ligase_M	8.40
PF07786	HGSNAT_cat	4.20
PF12344	UvrB	2.52
PF01042	Ribonuc_L-PSP	1.68
PF00106	adh_short	0.84
PF06823	DUF1236	0.84
PF02151	UVR	0.84
PF14693	Ribosomal_TL5_C	0.84
PF02016	Peptidase_S66	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	4.20
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.68
COG1619	Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.18 %
Unclassified	root	N/A	37.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.18 %
Unclassified	root	N/A	37.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.18 %
Unclassified	root	N/A	37.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.66 %
Unclassified	root	N/A	37.82 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.18 %
Unclassified	root	N/A	37.82 %
Hydrogenophilalia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia	8.40 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.68 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	37.82 %
Unclassified	root	N/A	37.82 %
Hydrogenophilales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales	8.40 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.82 %
Hydrogenophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae	8.40 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	5.04 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.36 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.82 %
unclassified Hydrogenophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae	8.40 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	5.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.52 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.82 %
Hydrogenophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	8.40 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	5.04 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.68 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.82 %
Hydrogenophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	8.40 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	3.36 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1.68 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.68 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	1.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100843404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	745	Open in IMG/M
3300000955\|JGI1027J12803_106659839	Not Available	528	Open in IMG/M
3300004633\|Ga0066395_10187758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1074	Open in IMG/M
3300005327\|Ga0070658_11948301	Not Available	507	Open in IMG/M
3300005329\|Ga0070683_102207187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	528	Open in IMG/M
3300005332\|Ga0066388_100311692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2219	Open in IMG/M
3300005335\|Ga0070666_10123314	Not Available	1798	Open in IMG/M
3300005337\|Ga0070682_100244267	Not Available	1290	Open in IMG/M
3300005339\|Ga0070660_100924719	Not Available	736	Open in IMG/M
3300005367\|Ga0070667_100322803	Not Available	1393	Open in IMG/M
3300005406\|Ga0070703_10172808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	829	Open in IMG/M
3300005439\|Ga0070711_102080785	Not Available	500	Open in IMG/M
3300005440\|Ga0070705_101623434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300005441\|Ga0070700_100224213	Not Available	1334	Open in IMG/M
3300005455\|Ga0070663_100674373	Not Available	876	Open in IMG/M
3300005459\|Ga0068867_100285998	Not Available	1354	Open in IMG/M
3300005618\|Ga0068864_100823243	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300005718\|Ga0068866_10455986	Not Available	837	Open in IMG/M
3300005843\|Ga0068860_100974157	Not Available	866	Open in IMG/M
3300006047\|Ga0075024_100861770	Not Available	512	Open in IMG/M
3300006057\|Ga0075026_100077368	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300006175\|Ga0070712_101013505	Not Available	719	Open in IMG/M
3300006237\|Ga0097621_100160074	Not Available	1935	Open in IMG/M
3300006755\|Ga0079222_10666757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	813	Open in IMG/M
3300006871\|Ga0075434_101575658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	665	Open in IMG/M
3300006903\|Ga0075426_11308594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	550	Open in IMG/M
3300006904\|Ga0075424_100251423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1879	Open in IMG/M
3300006954\|Ga0079219_10267298	Not Available	1031	Open in IMG/M
3300009094\|Ga0111539_11895135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	691	Open in IMG/M
3300009098\|Ga0105245_11237585	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300009101\|Ga0105247_10369294	Not Available	1014	Open in IMG/M
3300009101\|Ga0105247_11097034	Not Available	628	Open in IMG/M
3300009176\|Ga0105242_10752545	Not Available	959	Open in IMG/M
3300010043\|Ga0126380_11168648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	661	Open in IMG/M
3300010359\|Ga0126376_11419170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	720	Open in IMG/M
3300010359\|Ga0126376_11752817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	657	Open in IMG/M
3300010359\|Ga0126376_13227468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300010397\|Ga0134124_10498332	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300010400\|Ga0134122_12332735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	581	Open in IMG/M
3300010401\|Ga0134121_12428630	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300010403\|Ga0134123_10975159	Not Available	861	Open in IMG/M
3300012509\|Ga0157334_1061556	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300012907\|Ga0157283_10003694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2235	Open in IMG/M
3300012961\|Ga0164302_10936715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	668	Open in IMG/M
3300012984\|Ga0164309_10432978	Not Available	990	Open in IMG/M
3300012984\|Ga0164309_11722959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	537	Open in IMG/M
3300012986\|Ga0164304_11601122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	542	Open in IMG/M
3300012988\|Ga0164306_10125064	Not Available	1717	Open in IMG/M
3300012989\|Ga0164305_10769650	Not Available	795	Open in IMG/M
3300013297\|Ga0157378_10245667	Not Available	1711	Open in IMG/M
3300013307\|Ga0157372_10961780	Not Available	990	Open in IMG/M
3300013308\|Ga0157375_10264177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1883	Open in IMG/M
3300014325\|Ga0163163_11548407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	724	Open in IMG/M
3300014325\|Ga0163163_11661125	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300014325\|Ga0163163_12635604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	560	Open in IMG/M
3300014326\|Ga0157380_12083621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	630	Open in IMG/M
3300014968\|Ga0157379_11284867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	706	Open in IMG/M
3300014968\|Ga0157379_11317683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	698	Open in IMG/M
3300015371\|Ga0132258_11344563	Not Available	1805	Open in IMG/M
3300015372\|Ga0132256_101565652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	769	Open in IMG/M
3300015372\|Ga0132256_103592928	Not Available	521	Open in IMG/M
3300017944\|Ga0187786_10258918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	693	Open in IMG/M
3300017947\|Ga0187785_10446097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	633	Open in IMG/M
3300017959\|Ga0187779_10001909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	12939	Open in IMG/M
3300017959\|Ga0187779_10442510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	853	Open in IMG/M
3300017959\|Ga0187779_10737184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	668	Open in IMG/M
3300017974\|Ga0187777_10004363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9018	Open in IMG/M
3300017974\|Ga0187777_10030871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3437	Open in IMG/M
3300018029\|Ga0187787_10016587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1926	Open in IMG/M
3300018032\|Ga0187788_10132063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	928	Open in IMG/M
3300021560\|Ga0126371_13146836	Not Available	558	Open in IMG/M
3300021938\|Ga0213847_1009752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	681	Open in IMG/M
3300022886\|Ga0247746_1192666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	532	Open in IMG/M
3300022892\|Ga0247753_1004470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1359	Open in IMG/M
3300022893\|Ga0247787_1005128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1490	Open in IMG/M
3300023073\|Ga0247744_1001817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2371	Open in IMG/M
3300023077\|Ga0247802_1018402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	969	Open in IMG/M
3300023263\|Ga0247800_1000784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4965	Open in IMG/M
3300025321\|Ga0207656_10454959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	647	Open in IMG/M
3300025900\|Ga0207710_10135054	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300025903\|Ga0207680_10697286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	727	Open in IMG/M
3300025918\|Ga0207662_10899181	Not Available	627	Open in IMG/M
3300025919\|Ga0207657_11242305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	565	Open in IMG/M
3300025925\|Ga0207650_10009623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6609	Open in IMG/M
3300025927\|Ga0207687_10316026	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300025934\|Ga0207686_10474714	Not Available	966	Open in IMG/M
3300025965\|Ga0210090_1059369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300026023\|Ga0207677_10098010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2150	Open in IMG/M
3300026088\|Ga0207641_10015999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6141	Open in IMG/M
3300026095\|Ga0207676_11985169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	580	Open in IMG/M
3300026829\|Ga0207580_1006092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	544	Open in IMG/M
3300027462\|Ga0210000_1051429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	662	Open in IMG/M
3300027821\|Ga0209811_10319389	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300028379\|Ga0268266_10627366	Not Available	1033	Open in IMG/M
3300028381\|Ga0268264_10239744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1679	Open in IMG/M
3300031198\|Ga0307500_10258395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Hydrogenophilalia → Hydrogenophilales → Hydrogenophilaceae → unclassified Hydrogenophilaceae → Hydrogenophilaceae bacterium	540	Open in IMG/M
3300031740\|Ga0307468_101164675	Not Available	692	Open in IMG/M
3300031820\|Ga0307473_10735944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	696	Open in IMG/M
3300032013\|Ga0310906_10156311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1336	Open in IMG/M
3300032035\|Ga0310911_10099396	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300032174\|Ga0307470_10870231	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300032180\|Ga0307471_101406180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	858	Open in IMG/M
3300032180\|Ga0307471_104273074	Not Available	504	Open in IMG/M
3300032770\|Ga0335085_10168477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2723	Open in IMG/M
3300032770\|Ga0335085_10610535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1226	Open in IMG/M
3300033158\|Ga0335077_10949065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	862	Open in IMG/M
3300033475\|Ga0310811_10578471	Not Available	1139	Open in IMG/M
3300033551\|Ga0247830_10890878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	709	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.34%
Host-Associated	Host-Associated	38.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Plants	Host-Associated → Plants	38.66%
Aquatic	Environmental → Aquatic	4.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.08%
Roots	Host-Associated → Plants → Roots	4.20%
Sediment	Environmental → Aquatic → Sediment	2.52%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Marine	Environmental → Aquatic → Marine	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.92%
Loam	Environmental → Terrestrial → Soil → Loam	10.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.24%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.68%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.84%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021938	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - EE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026829	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3-11 (SPAdes)	Environmental	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1008434041	3300000955	Soil	SPDQALSGMRPLPESVRSIDGVEHLYYLKAKGKVLLVEPATRTVVGEIES*
JGI1027J12803_1066598392	3300000955	Soil	VADALAPASELSADQALSAMSPLPPAVRHIDGIANLYSIKGKTKVLLVEPATRTVVGEITD*
Ga0066395_101877581	3300004633	Tropical Forest Soil	ADALKPASELSPDQALSGMRPLPESVRSIDGVEHLYYLKAPHKILLVEPATRTVVGEIES
Ga0070658_119483011	3300005327	Corn Rhizosphere	ALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVGQITSPK*
Ga0070683_1022071871	3300005329	Corn Rhizosphere	ALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG*
Ga0066388_1003116921	3300005332	Tropical Forest Soil	ALSGMRPLPESVRSIDGVEHLYYLKAPHKILLVEPATRTVVGEIEP*
Ga0070666_101233141	3300005335	Switchgrass Rhizosphere	PPPAGAEALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVRAQGKVLLVEPAARTVVGQITSQK*
Ga0070682_1002442671	3300005337	Corn Rhizosphere	PTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0070660_1009247191	3300005339	Corn Rhizosphere	PPAGAEALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVRAQGKVLLVEPAARTVVGQITSQK*
Ga0070667_1003228031	3300005367	Switchgrass Rhizosphere	QALNGMHPLPASVRGIDGVTRLYYVRAQGKVLLVEPAARTVVGQITSQK*
Ga0070703_101728082	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	SELSPNQALNGMRPLPESVRGIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS*
Ga0070711_1020807852	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LSPDQALNGMHPLPASVRGIDGVTRFYYVKAQGKVLLVEPAVRTVVAQITPQK*
Ga0070705_1016234341	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PASELSPNQALNGMRPLPESVRGIDGVSRLYYIKARDKVLLIEPNVRTVVGQITAS*
Ga0070700_1002242131	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	KPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK*
Ga0070663_1006743731	3300005455	Corn Rhizosphere	ALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0070681_114872851	3300005458	Corn Rhizosphere	YDAVMAEKSQPVAGADALKPASELSPNQALNGMRPLPESVRGIDGVSRLYYIKARDKVLLIEPNVRTVVGQITAS*
Ga0068867_1002859981	3300005459	Miscanthus Rhizosphere	LNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK*
Ga0068864_1008232431	3300005618	Switchgrass Rhizosphere	DQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG*
Ga0068866_104559861	3300005718	Miscanthus Rhizosphere	DALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK*
Ga0068860_1009741572	3300005843	Switchgrass Rhizosphere	LNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0075024_1008617702	3300006047	Watersheds	LNGMHPLPASVRGIDGVSRLYYVKAQGKVLLVEPAVRTVVEQITSQK*
Ga0075026_1000773685	3300006057	Watersheds	SEPVAGADALKPASELSPDQALNGMRPLPESVRSIDGVERLYYLKAKRKVLLVEPATRTVVGEIKS*
Ga0070712_1010135051	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGAEALKPTSELSTDQTLNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPTVRTVVGQITSQK*
Ga0097621_1001600741	3300006237	Miscanthus Rhizosphere	SPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVGQITSPK*
Ga0075021_110486411	3300006354	Watersheds	WPRMPCNRCCLSAVFSAQPVAGADALKPASELSPDQALNGMHPLPESVRSIDGVTRLYYVKAKGKVLLVEPASRTVVGQITS*
Ga0068871_1006131652	3300006358	Miscanthus Rhizosphere	GMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0074055_105657212	3300006573	Soil	DAVMAESSQPVDGADALKPASELSPDQALNGMRRLPESVRTIDGVERLYYLKAKGKVLLVEPATRTVVGEIKS*
Ga0079222_106667571	3300006755	Agricultural Soil	QALGGMHPLPESVRSIDGVSRLYYVKANGKVFLVEPATRTVVGQITS*
Ga0075434_1015756581	3300006871	Populus Rhizosphere	VAGADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKAMRKVLLVEPATRTVVGEIGG*
Ga0075426_113085942	3300006903	Populus Rhizosphere	SELSPNQALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS*
Ga0075424_1002514233	3300006904	Populus Rhizosphere	YDAVMSDTSQPVAGADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0079219_102672982	3300006954	Agricultural Soil	DALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0111539_118951352	3300009094	Populus Rhizosphere	QALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG*
Ga0105245_112375851	3300009098	Miscanthus Rhizosphere	LKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRTVLLVEPATRTVVGEIGG*
Ga0105247_103692942	3300009101	Switchgrass Rhizosphere	GADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG*
Ga0105247_110970341	3300009101	Switchgrass Rhizosphere	AVMAESSPPPAGAEALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAARTVVGQITSQK*
Ga0105242_107525452	3300009176	Miscanthus Rhizosphere	MSDTSQPVADADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG*
Ga0105242_132719091	3300009176	Miscanthus Rhizosphere	IYDAVMAESSPPPAGAEALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVRAQGKVLLVEPAARTVVGQITSQK*
Ga0126380_111686481	3300010043	Tropical Forest Soil	ASELSPDLALSGMRPLPESVRSIDGVEHLYYLKAKGKVLLVEPATRTVVGEIES*
Ga0126376_114191701	3300010359	Tropical Forest Soil	ADALKPASELSPDQALNGMRPLPESVRSIDGLSRLYYIKANDKVLLIEPNVRTVVGQITPS*
Ga0126376_117528172	3300010359	Tropical Forest Soil	SPDQALNGMRPLPESVRSIDGVEHLYYLKAKGKVLLVEPATRTVVGEIES*
Ga0126376_132274681	3300010359	Tropical Forest Soil	DAVMADKSAPAAGADALKPSSELSPDQALNGMRPLPDSVRDIDGVKGLYYLKAKDKALLIDGPTRTVVAEIKG*
Ga0134124_104983322	3300010397	Terrestrial Soil	ALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRTVLLVEPATRTVVGEIGG*
Ga0134122_123327352	3300010400	Terrestrial Soil	ELSPNQALNGMRPLPESVRSIDGVSRLYYITAKDKVLLIEPNVRTVVGQITAS*
Ga0134121_124286301	3300010401	Terrestrial Soil	LSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0134123_109751592	3300010403	Terrestrial Soil	LKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAARTVVGQITSQK*
Ga0157334_10615562	3300012509	Soil	SQPVAGADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0157283_100036944	3300012907	Soil	ASELSPNQALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS*
Ga0164302_109367151	3300012961	Soil	MADTSQPVAGADALKPASELSPNQALNGMHPLPEGVRGIAGVTRLPYLKATGKVLLVEPATRTVVGQITL*
Ga0164309_104329781	3300012984	Soil	VMAESSPPPAGAEALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK*
Ga0164309_117229591	3300012984	Soil	TSQPVAGADALKPASELSPNQALNGMHPLPEGVRGIDGVTRLHYLKAKGKVLLVEPATRTVVGQITL*
Ga0164304_116011221	3300012986	Soil	IYDAVMSDTSQPVADADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYHLKTKRKVLLVEPATRTVVGEIGG*
Ga0164306_101250641	3300012988	Soil	PTSELSPDQALNGMHPLPASVRGIDGVTRLYYVRAQGKVLLVEPAARTVVGQITSQK*
Ga0164306_103900542	3300012988	Soil	MAESSPPPAGAEALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK*
Ga0164305_107696502	3300012989	Soil	EALKPTSELSPDQALNGMHPLPASVRGIDGVTRFYYVKAQGKVLLVEPAVRTVVAQITPQK*
Ga0157378_102456671	3300013297	Miscanthus Rhizosphere	PPPAGAEALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVGQITSPK*
Ga0157372_109617801	3300013307	Corn Rhizosphere	ALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK
Ga0157375_102641773	3300013308	Miscanthus Rhizosphere	ELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRTVLLVEPATRTVVGEIGG*
Ga0163163_115484071	3300014325	Switchgrass Rhizosphere	KPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRTVLLVEPATRTVVGEIGG*
Ga0163163_116611251	3300014325	Switchgrass Rhizosphere	TSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG*
Ga0163163_126356042	3300014325	Switchgrass Rhizosphere	PVVGADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG*
Ga0157380_120836212	3300014326	Switchgrass Rhizosphere	AVMAEKSQPVVVGADALKPTSELSPNQALNGMRPLPESVRGIDGVSRLYYIKAKEKVLLIEPNVRTVVGQITAS*
Ga0157379_112848671	3300014968	Switchgrass Rhizosphere	DALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG*
Ga0157379_113176832	3300014968	Switchgrass Rhizosphere	LSPNQALNGMRPLPESVRGIDGVSRLYYIKAKEKVLLIEPNVRTVVGQITAS*
Ga0132258_113445631	3300015371	Arabidopsis Rhizosphere	TLKPTSELSPDQALNGMHPLPESVRGIDDVARLYYVKAQGKVLLVEPAVRTVVGQITSQK
Ga0132256_1015656521	3300015372	Arabidopsis Rhizosphere	KPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKAKRKVLLVEPATRTVVGEIGG*
Ga0132256_1035929281	3300015372	Arabidopsis Rhizosphere	TSQPVAGADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG*
Ga0182032_115718392	3300016357	Soil	VMAEKSQVPAGASALKPASELSPDQASSGMHPLPASVRGIDGLQHLYYVKAQGKVLLVEPDVRTVVGEITPGK
Ga0187786_102589182	3300017944	Tropical Peatland	AVMAEKEKPVADADALKPASELSPDQALNGMHPLPESVRGIDGVARLYFVKAKNKVLLVEPATRTVVGQITS
Ga0187785_104460972	3300017947	Tropical Peatland	GADALKPASELSTNQALNGMRPLPESVRGIDGVQRLYYVKAKGKILLIEPATRTVVGEIA
Ga0187779_1000190911	3300017959	Tropical Peatland	MADKSQPVAGADALKPASELSPNQALKGMHPLPESVRGIDGLTRLYFVKAKGRVLLIEPATRTVVGQITG
Ga0187779_104425101	3300017959	Tropical Peatland	GRTRPVAGADALKPSSELSPHQALNGMKPLPEGVRGIDGVSRLYYLKAKGKVLLIEPATRTVVGQITSE
Ga0187779_107371841	3300017959	Tropical Peatland	KSPLVADADSLKPASELSPDQALNGMHPVPESVRSIDGLAHLYYLKGKDRVFLIEPATRTVVDQISL
Ga0187777_1000436311	3300017974	Tropical Peatland	NSRPVAGADALKPSSELSPHQALNGMKPLPEGVRGIDGVSQLYYLKAKGKVLLIEPATRTVVGQITSE
Ga0187777_100308717	3300017974	Tropical Peatland	ADALKPASELSPNQALKGMHPLPESVRGIDGLTRLYFVKAKGKVLLIEPATRTVVGQITG
Ga0187787_100165872	3300018029	Tropical Peatland	VLKPASELSPNQALNGMHPLPESVRSIDGVTQLYYAKAKGKVLLVEPATRTVVGEITS
Ga0187788_101320632	3300018032	Tropical Peatland	DALKPASELSPNQALNGMHPLPESVRGIEGVTRLFYVKAKGKVFLVEPATRTVVDQITS
Ga0126371_131468362	3300021560	Tropical Forest Soil	SELSPDQALNGMHPMPASVRDIDSVTRLYYVKAQGKVLLVEPNVRTVVGEITPGK
Ga0213847_10097522	3300021938	Watersheds	LKPASELSPDQALNGMHPLPASVRDIDGVTRLYYVKAQGKVLLVEPATRTVVGQITS
Ga0247746_11926662	3300022886	Soil	QALNGMRPLPESVRGIDGVSRLYYIKAKEKVLLIEPNVRTVVGQITAS
Ga0247753_10044701	3300022892	Soil	QALNGMRPLPESVRGIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS
Ga0247787_10051281	3300022893	Soil	QALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS
Ga0247744_10018174	3300023073	Soil	DALELASELSPNQALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS
Ga0247802_10184023	3300023077	Soil	ELASELSPNQALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS
Ga0247800_10007841	3300023263	Soil	LASELSPNQALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS
Ga0207656_104549592	3300025321	Corn Rhizosphere	PDQALNGMRPLPESVRGIDGASRLYYIKTKDKVLLIEPNVRTVVGQITAS
Ga0207710_101350541	3300025900	Switchgrass Rhizosphere	QPVVGADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG
Ga0207680_106972861	3300025903	Switchgrass Rhizosphere	SPDQALNGMRPLPESVRGIDGASRLYYIKTKDKVLLIEPNVRTVVGQITAS
Ga0207662_108991811	3300025918	Switchgrass Rhizosphere	NGMHPLPASVRGIDGVTRLYYVRAQGKVLLVEPAARTVVGQITSQK
Ga0207657_112423052	3300025919	Corn Rhizosphere	KSQPVVGADALEPASELSPNQALNGMRPLPESVRGIDGVSRLYYIKAKEKVLLIEPNVRTVVGQITAS
Ga0207652_107903261	3300025921	Corn Rhizosphere	IYDAVMAENSPPSAGADALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK
Ga0207650_100096231	3300025925	Switchgrass Rhizosphere	ADALEPASELSPNQALNGMRPLPESVRGIDGVSRLYYIKAKEKVLLIEPNVRTVVGQITA
Ga0207687_103160262	3300025927	Miscanthus Rhizosphere	VMSDTSQPVADADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG
Ga0207686_104747141	3300025934	Miscanthus Rhizosphere	ALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG
Ga0207689_104510761	3300025942	Miscanthus Rhizosphere	AVMAENSPPSAGADALKPTSELSPDQALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK
Ga0210090_10593691	3300025965	Natural And Restored Wetlands	PNQAFNNMHPLPESVRGIDGASRLYYIKAKDKVLLIEPNVRTVIGQITAT
Ga0207677_100980101	3300026023	Miscanthus Rhizosphere	DTSQPVADADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG
Ga0207641_100159991	3300026088	Switchgrass Rhizosphere	ASELSPNQALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS
Ga0207676_119851691	3300026095	Switchgrass Rhizosphere	QALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG
Ga0207580_10060921	3300026829	Soil	ELSPNQALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS
Ga0210000_10514291	3300027462	Arabidopsis Thaliana Rhizosphere	PNQALNGMRPLPESVRGIDGASRLYYIKAKDKVLLIEPNVRTVVGQITAS
Ga0209074_103400411	3300027787	Agricultural Soil	AVMTEKAPAVAGADTLEPASELSPDQALTGMRPLPASVRGIDGVSRLYYIKARDKVLLIEPNVRTVVGQITAS
Ga0209811_103193892	3300027821	Surface Soil	GADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIG
Ga0268266_106273661	3300028379	Switchgrass Rhizosphere	TSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG
Ga0268264_102397442	3300028381	Switchgrass Rhizosphere	LNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG
Ga0307500_102583952	3300031198	Soil	SPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG
Ga0307468_1011646752	3300031740	Hardwood Forest Soil	PTSELSPDQALNGMHPLPESVRGIDGATRFYYVKAQGKVLLVEPAVRTVVAEITSQK
Ga0307473_107359442	3300031820	Hardwood Forest Soil	QPVAGADALKPTSELSSNQALNGMRPLPESVRSIDGVSRLYYLKAKGKVLLIEPATRTVVGQITS
Ga0310906_101563112	3300032013	Soil	NGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPAIRTVIGEIGG
Ga0310911_100993964	3300032035	Soil	LSPDQALSGMRPLPESVRSIDGVEHLYYLKAPHKILLVEPATRTVVCEIES
Ga0307470_108702311	3300032174	Hardwood Forest Soil	ADALKPTSELSPDQALNGMRPLPESVRSIDGVERLYYLKTKRKVLLVEPATRTVVGEIGG
Ga0307471_1014061802	3300032180	Hardwood Forest Soil	QALNGMRPLPESVRGIDGVSRLYYIKAKDKVLLIEPDVRTVVGQITP
Ga0307471_1042730742	3300032180	Hardwood Forest Soil	ESSQPVDGADALKPASELSPDQALNGMRRLPESVRTIDGVERLYYLKAKGKVLLVEPATRTVVGEIKS
Ga0335085_101684775	3300032770	Soil	VAGADALKPASELSPNQALNGMHPLPESVRGIDGVTRLYYVKAKGKVLLVEPASRTVVGQITS
Ga0335085_106105353	3300032770	Soil	TADKSQPVAGAEALKPASELSPDQALNGMHPLPESVRGIDGVTRLYYVKAKGKVLLVEPAIRTVVGQINS
Ga0335077_109490651	3300033158	Soil	SQPVAGADALKPASELSPNQALKGMHPLPESVRGIDGVTRLYYVKAKGKILLIEPATRTVVGQITG
Ga0310811_105784713	3300033475	Soil	QALNGMHPLPASVRGIDGVTRLYYVKAQGKVLLVEPAVRTVVAQITSQK
Ga0316624_119425672	3300033486	Soil	QIYDAVMADNSQPVAGVDALKPASELSPNQALNGMHPLPESVRSIDGVTRLYYVKAKGKVLLVEPATRTVVEEITS
Ga0247830_108908781	3300033551	Soil	SELSPNQALNGMRPLPESVRSIDGVSRLYYIKAKDKVLLIEPNVRTVVGQITAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075167

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences