Metagenome / Metatranscriptome Family F075150

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075150
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	76 residues
Representative Sequence	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Number of Associated Samples	96
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.63 %
% of genes near scaffold ends (potentially truncated)	43.70 %
% of genes from short scaffolds (< 2000 bps)	74.79 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.471 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (55.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.47% β-sheet: 0.00% Coil/Unstructured: 35.53%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04392	ABC_sub_bind	5.88
PF00775	Dioxygenase_C	3.36
PF09361	Phasin_2	2.52
PF00144	Beta-lactamase	1.68
PF08388	GIIM	0.84
PF07885	Ion_trans_2	0.84
PF04072	LCM	0.84
PF00248	Aldo_ket_red	0.84
PF01161	PBP	0.84
PF06897	DUF1269	0.84
PF13560	HTH_31	0.84
PF01547	SBP_bac_1	0.84
PF01965	DJ-1_PfpI	0.84
PF13358	DDE_3	0.84
PF00753	Lactamase_B	0.84
PF01699	Na_Ca_ex	0.84
PF07883	Cupin_2	0.84
PF06863	DUF1254	0.84
PF03988	DUF347	0.84
PF13924	Lipocalin_5	0.84
PF01464	SLT	0.84
PF13495	Phage_int_SAM_4	0.84
PF12071	DUF3551	0.84
PF13191	AAA_16	0.84
PF08238	Sel1	0.84
PF00106	adh_short	0.84
PF00891	Methyltransf_2	0.84
PF06055	ExoD	0.84
PF00496	SBP_bac_5	0.84
PF13458	Peripla_BP_6	0.84
PF13432	TPR_16	0.84
PF05088	Bac_GDH	0.84
PF00232	Glyco_hydro_1	0.84
PF13493	DUF4118	0.84
PF00365	PFK	0.84
PF05721	PhyH	0.84
PF03060	NMO	0.84
PF00027	cNMP_binding	0.84
PF16868	NMT1_3	0.84
PF02371	Transposase_20	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.88
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.36
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.68
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.68
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.68
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	0.84
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.84
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.84
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.84
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	0.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.84
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.84
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.84
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.84
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.84
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.84
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.84
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.47 %
Unclassified	root	N/A	23.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.47 %
Unclassified	root	N/A	23.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.47 %
Unclassified	root	N/A	23.53 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.91 %
Unclassified	root	N/A	23.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.50 %
Unclassified	root	N/A	23.53 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.84 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	52.10 %
Unclassified	root	N/A	23.53 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.68 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.84 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	49.58 %
Unclassified	root	N/A	23.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.84 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	47.06 %
Unclassified	root	N/A	23.53 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	19.33 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	0.84 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.84 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.84 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.84 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.84 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	15.97 %
Bradyrhizobium sp. JYMT SZCCT0180	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	1.68 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.84 %
unclassified Deinococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → unclassified Deinococcus	0.84 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.84 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	0.84 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.84 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.84 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.84 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	15.97 %
Bradyrhizobium sp. JYMT SZCCT0180	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	1.68 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Deinococcus sp. KNUC1210	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → unclassified Deinococcus → Deinococcus sp. KNUC1210	0.84 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.84 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.84 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	0.84 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.84 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.84 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.84 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908044\|A5_c1_ConsensusfromContig13264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1079	Open in IMG/M
3300000732\|JGI12023J11887_1001979	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300000901\|JGI12192J12874_100753	Not Available	849	Open in IMG/M
3300000907\|JGI11871J12876_104887	Not Available	533	Open in IMG/M
3300001181\|JGI12663J13571_104372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	524	Open in IMG/M
3300002914\|JGI25617J43924_10208644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	650	Open in IMG/M
3300005554\|Ga0066661_10457274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	778	Open in IMG/M
3300005557\|Ga0066704_10089912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	2002	Open in IMG/M
3300005569\|Ga0066705_10145013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1454	Open in IMG/M
3300006047\|Ga0075024_100297216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	790	Open in IMG/M
3300006175\|Ga0070712_101912633	Not Available	519	Open in IMG/M
3300006797\|Ga0066659_10055256	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300007265\|Ga0099794_10253986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300007265\|Ga0099794_10686712	Not Available	545	Open in IMG/M
3300009029\|Ga0066793_10425367	Not Available	762	Open in IMG/M
3300009088\|Ga0099830_11110426	Not Available	656	Open in IMG/M
3300009143\|Ga0099792_10344666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	897	Open in IMG/M
3300009650\|Ga0105857_1286362	Not Available	503	Open in IMG/M
3300010876\|Ga0126361_10218987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	775	Open in IMG/M
3300011269\|Ga0137392_10989195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	691	Open in IMG/M
3300011270\|Ga0137391_10548287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	974	Open in IMG/M
3300011271\|Ga0137393_10043986	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300011271\|Ga0137393_10765300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	826	Open in IMG/M
3300012096\|Ga0137389_11704125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	526	Open in IMG/M
3300012199\|Ga0137383_10520133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	871	Open in IMG/M
3300012200\|Ga0137382_10149779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1581	Open in IMG/M
3300012202\|Ga0137363_10778458	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300012209\|Ga0137379_10061357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	3619	Open in IMG/M
3300012210\|Ga0137378_10570826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1040	Open in IMG/M
3300012211\|Ga0137377_10010160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7864	Open in IMG/M
3300012211\|Ga0137377_10440309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1242	Open in IMG/M
3300012285\|Ga0137370_10497817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	746	Open in IMG/M
3300012349\|Ga0137387_10325704	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300012357\|Ga0137384_10068611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2944	Open in IMG/M
3300012357\|Ga0137384_10153156	All Organisms → cellular organisms → Bacteria → Proteobacteria	1930	Open in IMG/M
3300012357\|Ga0137384_10155260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1915	Open in IMG/M
3300012357\|Ga0137384_10296715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1344	Open in IMG/M
3300012685\|Ga0137397_10478972	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300012922\|Ga0137394_10589294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	941	Open in IMG/M
3300012925\|Ga0137419_10240429	Not Available	1360	Open in IMG/M
3300012927\|Ga0137416_10045647	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300012929\|Ga0137404_10003668	All Organisms → cellular organisms → Bacteria → Proteobacteria	10218	Open in IMG/M
3300012930\|Ga0137407_12115499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	537	Open in IMG/M
3300012944\|Ga0137410_10107748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2075	Open in IMG/M
3300012944\|Ga0137410_11029295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	702	Open in IMG/M
3300015051\|Ga0137414_1110661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6329	Open in IMG/M
3300015052\|Ga0137411_1060927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300015052\|Ga0137411_1364367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2720	Open in IMG/M
3300015053\|Ga0137405_1283564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1806	Open in IMG/M
3300015054\|Ga0137420_1074875	Not Available	624	Open in IMG/M
3300015241\|Ga0137418_10020528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6105	Open in IMG/M
3300015241\|Ga0137418_10599015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	865	Open in IMG/M
3300015245\|Ga0137409_11095504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	635	Open in IMG/M
3300015264\|Ga0137403_10107668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2790	Open in IMG/M
3300018027\|Ga0184605_10316847	Not Available	705	Open in IMG/M
3300018053\|Ga0184626_10447402	Not Available	509	Open in IMG/M
3300018071\|Ga0184618_10010183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2812	Open in IMG/M
3300018071\|Ga0184618_10097868	Not Available	1146	Open in IMG/M
3300019789\|Ga0137408_1145257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1152	Open in IMG/M
3300019789\|Ga0137408_1148432	Not Available	1650	Open in IMG/M
3300019789\|Ga0137408_1363854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2520	Open in IMG/M
3300019868\|Ga0193720_1058451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	536	Open in IMG/M
3300019875\|Ga0193701_1108820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	508	Open in IMG/M
3300019878\|Ga0193715_1020293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1443	Open in IMG/M
3300019879\|Ga0193723_1007315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3649	Open in IMG/M
3300019879\|Ga0193723_1019285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2099	Open in IMG/M
3300019882\|Ga0193713_1000707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11160	Open in IMG/M
3300019883\|Ga0193725_1043902	Not Available	1159	Open in IMG/M
3300019885\|Ga0193747_1102921	Not Available	690	Open in IMG/M
3300019886\|Ga0193727_1001068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11212	Open in IMG/M
3300019886\|Ga0193727_1002394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7885	Open in IMG/M
3300019886\|Ga0193727_1011650	All Organisms → cellular organisms → Bacteria → Proteobacteria	3355	Open in IMG/M
3300019886\|Ga0193727_1013722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3046	Open in IMG/M
3300019998\|Ga0193710_1031822	Not Available	532	Open in IMG/M
3300020018\|Ga0193721_1010658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2411	Open in IMG/M
3300020018\|Ga0193721_1024738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	1589	Open in IMG/M
3300020022\|Ga0193733_1002726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5144	Open in IMG/M
3300020022\|Ga0193733_1019424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1916	Open in IMG/M
3300020170\|Ga0179594_10157948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	840	Open in IMG/M
3300021080\|Ga0210382_10391990	Not Available	614	Open in IMG/M
3300021086\|Ga0179596_10271843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	840	Open in IMG/M
3300021344\|Ga0193719_10083186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1391	Open in IMG/M
3300022694\|Ga0222623_10410354	Not Available	514	Open in IMG/M
3300023058\|Ga0193714_1038047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	703	Open in IMG/M
3300024330\|Ga0137417_1275284	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300024330\|Ga0137417_1332628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1870	Open in IMG/M
3300025898\|Ga0207692_10781893	Not Available	623	Open in IMG/M
3300026304\|Ga0209240_1013155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3150	Open in IMG/M
3300026340\|Ga0257162_1006953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1296	Open in IMG/M
3300026490\|Ga0257153_1098916	Not Available	579	Open in IMG/M
3300026551\|Ga0209648_10083201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2665	Open in IMG/M
3300026557\|Ga0179587_10940548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	569	Open in IMG/M
3300027176\|Ga0208992_1043232	Not Available	612	Open in IMG/M
3300027181\|Ga0208997_1028071	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300027383\|Ga0209213_1026767	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300027388\|Ga0208995_1015450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1308	Open in IMG/M
3300027388\|Ga0208995_1089229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	537	Open in IMG/M
3300027480\|Ga0208993_1018570	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300027562\|Ga0209735_1014029	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300027633\|Ga0208988_1027230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1473	Open in IMG/M
3300027663\|Ga0208990_1101066	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300027669\|Ga0208981_1008925	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300027669\|Ga0208981_1015068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1964	Open in IMG/M
3300027671\|Ga0209588_1113448	Not Available	870	Open in IMG/M
3300027674\|Ga0209118_1048966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1253	Open in IMG/M
3300027862\|Ga0209701_10351553	Not Available	834	Open in IMG/M
3300028710\|Ga0307322_10159839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	603	Open in IMG/M
3300028768\|Ga0307280_10414638	Not Available	504	Open in IMG/M
3300028878\|Ga0307278_10070610	Not Available	1575	Open in IMG/M
3300028881\|Ga0307277_10076256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	1397	Open in IMG/M
3300028881\|Ga0307277_10206584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	861	Open in IMG/M
3300028884\|Ga0307308_10012370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3818	Open in IMG/M
3300031094\|Ga0308199_1111514	Not Available	614	Open in IMG/M
3300031231\|Ga0170824_117606466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031456\|Ga0307513_10767208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	670	Open in IMG/M
3300031708\|Ga0310686_109171770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → unclassified Deinococcus → Deinococcus sp. KNUC1210	2177	Open in IMG/M
3300032180\|Ga0307471_103217072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	579	Open in IMG/M
3300034644\|Ga0370548_078385	Not Available	637	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.28%
Aquatic	Environmental → Aquatic	5.88%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.28%
Sediment	Environmental → Aquatic → Sediment	5.04%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.47%
Loam	Environmental → Terrestrial → Soil → Loam	15.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	66.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.84%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.84%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.84%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300000732	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2	Environmental	Open in IMG/M
3300000901	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2	Environmental	Open in IMG/M
3300000907	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1	Environmental	Open in IMG/M
3300001181	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019998	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_c1_00348080	2124908044	Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCSVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNG
JGI12023J11887_10019792	3300000732	Forest Soil	LKAATNLNVVQPKLFQASRQDDRHFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL*
JGI12192J12874_1007532	3300000901	Forest Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL*
JGI11871J12876_1048872	3300000907	Forest Soil	LKAATNLNVVQPKLFQASRQDDRRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHHLNGRTSAQR
JGI12663J13571_1043721	3300001181	Forest Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLS
JGI25617J43924_102086441	3300002914	Grasslands Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL*
Ga0066661_104572741	3300005554	Soil	LEHHSANQFLKAATKPQCCSPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL*
Ga0066704_100899124	3300005557	Soil	LEHYSANQFLKAATKPQCCSPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELWTVLSATTMFADKPHSL*
Ga0066705_101450132	3300005569	Soil	CDFKELGGKTVTFDNFCAISRTTPLEHYSANQFLKAATNLNVVHRNCFKLLVKMITASDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL*
Ga0075024_1002972162	3300006047	Watersheds	ATALEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCSVSVIQILDDADAAFRILGAGLRTVLSVTTTFADKPHRLNG*
Ga0070712_1019126331	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PCDFKELGGKTVTFGNFCAISLATALENHRANQFLKAATLSQATRQDDPCFFDCTVSDIQILDDADVAFRISGAELRTVLSATTMLADKPHRQLGADGQTLLDSVENDPMQTS*
Ga0066659_100552561	3300006797	Soil	LEHHSANQFLKAATKPQCCSPKLFQASRQDDHRFSDRTVSVIQILDDADSAFRILGAELWTVLSATTMFADKPHSL*
Ga0099794_102539862	3300007265	Vadose Zone Soil	ATALEHHSANQFLKAATNLNFVQPKLFQASRQDDLRFSDCTVSVIQILDNADAAFSILGAELRIVLSATTMFADKPHRLKGRTN*
Ga0099794_106867122	3300007265	Vadose Zone Soil	VRRCKTVTFDNFCAISLTTPLEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL*
Ga0066793_104253671	3300009029	Prmafrost Soil	MEHHRANQFLKTATNLDFVQPKLFQAIRQDGHCFADCTVFVIQILDDADVVFRISDAELRTVLPATTMLAGKPHRLNGRTIAQRFSALALFGHRGAIR*
Ga0099830_111104262	3300009088	Vadose Zone Soil	LKAATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL*
Ga0099792_103446661	3300009143	Vadose Zone Soil	AATNLNFVQPKLFQASRQDDHRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL*
Ga0105857_12863621	3300009650	Permafrost Soil	LEHHSANQFLKAATNLNVVQPKLFQASRRDDLRFSDRSVSVIQILDDADAALRILGAGLRTVLSVTTMFADKAH
Ga0126361_102189871	3300010876	Boreal Forest Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDVDAAFRILGAELRTVLSVTTMFADKPHSL*
Ga0137392_109891951	3300011269	Vadose Zone Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAEWRTVLSATTMFADKPHSL*
Ga0137391_105482872	3300011270	Vadose Zone Soil	LKAATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELWTVLSATTMYADKPHRL*
Ga0137393_100439861	3300011271	Vadose Zone Soil	LEHHSANNQFLKAATNLNVVQSKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFTDKPHRLNG*
Ga0137393_107653001	3300011271	Vadose Zone Soil	LKAATNLNFVQPKLFQASRQDDLRFSDCTVSVIQILGNTDAALSILGAELRIVLSATTMFADKPHRLNGRTN*
Ga0137389_117041251	3300012096	Vadose Zone Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQHDHRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADK
Ga0137383_105201332	3300012199	Vadose Zone Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRSSDCTVSVIQILDDADAAFCILGAELRTVLSATTMYADKPHRL*
Ga0137382_101497791	3300012200	Vadose Zone Soil	LEHPSAIQFLKAATNLNVVQPKLFQASRQHDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMYAD
Ga0137363_107784581	3300012202	Vadose Zone Soil	LNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPRRL*
Ga0137379_100613578	3300012209	Vadose Zone Soil	AIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSIIQILDDADAASRILGAELRTVLSATTMFADKPHSL*
Ga0137378_105708262	3300012210	Vadose Zone Soil	AIQLLKAATNLNVVQPKLFQASRQDDHRSSDCTVSVIQILDDADAAFCILGAELRTVLSATTMYADKPHRL*
Ga0137377_100101601	3300012211	Vadose Zone Soil	LEHHSANQFLKAATKPQCCSPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELWTVLSATTMFADKPHSL*
Ga0137377_104403093	3300012211	Vadose Zone Soil	IQLLKAATNLNVVQPKLFQASRQDDHRSSDCTVSVIQILDDADAAFCILGAELRTVLSATTMYADKPHRL*
Ga0137370_104978171	3300012285	Vadose Zone Soil	SAIQFLKAATNLNVVQPKLFRASRQDDHRSSDCTVSVIQILDDADAAFCILGAELRTVLSATTMYADKPHRL*
Ga0137387_103257041	3300012349	Vadose Zone Soil	ALRQPWSIIARTNFLKAATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL*
Ga0137384_100686114	3300012357	Vadose Zone Soil	LQNGHVRQLLRDQPYDTLEHHSAIQLLKAATNLNVVQPKLFQASRQDDHRSSDCTVSVIQILDDADAAFCILGAELRTVLSATTMYADKPHRL*
Ga0137384_101531563	3300012357	Vadose Zone Soil	ATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL*
Ga0137384_101552603	3300012357	Vadose Zone Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDFRFSDCTVSVIQILDDADAAFRILGAGLRAVLSVTTMFADKPHRLNGRTSA*
Ga0137384_102967152	3300012357	Vadose Zone Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSVTTMFADKPHRLNGRTSA*
Ga0137397_104789723	3300012685	Vadose Zone Soil	AATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL*
Ga0137394_105892942	3300012922	Vadose Zone Soil	CKTVTFDNFCAISLTTPLEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL*
Ga0137419_102404292	3300012925	Vadose Zone Soil	NLNFVQPKLFQASRQDDLRFSYCRVSVIQILDNADRAFRVLGAELRTVLSATTMFADKPHSL*
Ga0137416_100456473	3300012927	Vadose Zone Soil	FLKAATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDAEGAFRILGAELRTVLSATTMYADKPHRL*
Ga0137404_1000366820	3300012929	Vadose Zone Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSAITMFADKPHSL*
Ga0137407_121154992	3300012930	Vadose Zone Soil	VTALEYHSAIQFLKARNKPNVVPPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKP
Ga0137410_101077481	3300012944	Vadose Zone Soil	FLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFGIFGSELRTVLSATTMFADKPHSL*
Ga0137410_110292951	3300012944	Vadose Zone Soil	LKAATNLNFVQPKLFQASRQDDLRFSDCTVSVIQILDNADAAFSILGAELRIVLSATTMFADKPHRLKGRTN*
Ga0137414_11106615	3300015051	Vadose Zone Soil	LKAATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMYADKPHRL*
Ga0137411_10609271	3300015052	Vadose Zone Soil	LKAATNLNVVQSKLFQASRQDDLRFSDCSVFVIQIPDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRMCAAISCFDDLA
Ga0137411_13643675	3300015052	Vadose Zone Soil	LKAATNLNVVQPKLFQASRQDDRRFSDCTVSIIQILDDADAAFRILGAELRTVLSATTMYADKPHRL*
Ga0137405_12835641	3300015053	Vadose Zone Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQHDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL*
Ga0137420_10748751	3300015054	Vadose Zone Soil	LEHHSANNQFLKAATNLNVVQSKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRNARSDFVF*
Ga0137418_100205281	3300015241	Vadose Zone Soil	LKAATNLNVVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL*
Ga0137418_105990151	3300015241	Vadose Zone Soil	LKAATNLNVVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTM
Ga0137409_110955041	3300015245	Vadose Zone Soil	LEHHSANQFLKAATNLNFVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL*
Ga0137403_101076681	3300015264	Vadose Zone Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL*
Ga0184605_103168471	3300018027	Groundwater Sediment	MGFQRVRRCKTVTFDNFCAISLATALEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0184626_104474021	3300018053	Groundwater Sediment	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRMCASDFVF
Ga0184618_100101833	3300018071	Groundwater Sediment	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDAASRILGAELRTVLSATTMFADKPHRL
Ga0184618_100978682	3300018071	Groundwater Sediment	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0137408_11452571	3300019789	Vadose Zone Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQHDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL
Ga0137408_11484321	3300019789	Vadose Zone Soil	LEHHSANQFLKAATNLNGVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRNARSDFVF
Ga0137408_13638547	3300019789	Vadose Zone Soil	LEHHGAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSAITMFADKPHSL
Ga0193720_10584511	3300019868	Soil	LATALEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0193701_11088201	3300019875	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTV
Ga0193715_10202931	3300019878	Soil	RHPLEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELPTVLSATTMFADKPHRL
Ga0193723_10073151	3300019879	Soil	HSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELPTVLSATTMFADKPHRL
Ga0193723_10192852	3300019879	Soil	LTTPLEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL
Ga0193713_10007071	3300019882	Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNG
Ga0193725_10439021	3300019883	Soil	LEHHSANQFLKAATNLNFVQPKLFQASRQDDLRFSYCRVSVIQILHNADAAFRILGAGLRTVLSVTTMFADKPHRLNGRNARSDFVF
Ga0193747_11029211	3300019885	Soil	FCAISLTTPLEHHSAIQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0193727_100106817	3300019886	Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLPTVLSVTTMFADKPHRLNGRMCASDFVF
Ga0193727_10023946	3300019886	Soil	LKAATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0193727_10116502	3300019886	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0193727_10137224	3300019886	Soil	QFLKAATNLNFVQPKLFQASRQDDLRFSYCRVSVIQILHNADAAFRILGAGLRTVLSVTTMFADKPHRLNGRNARSDFVF
Ga0193710_10318222	3300019998	Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRM
Ga0193721_10106581	3300020018	Soil	ALRHPLEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELPTVLSATTMFADKPHRL
Ga0193721_10247381	3300020018	Soil	MGFQRVRRCKTVTFDNFCAISLATALEHHGANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0193721_10932321	3300020018	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADGAFRILGAGLRTV
Ga0193733_100272614	3300020022	Soil	AIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELPTVLSATTMFADKPHRL
Ga0193733_10194244	3300020022	Soil	CSISLATALEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0179594_101579481	3300020170	Vadose Zone Soil	LKAATNLNFVQPKLFQASRQDDLRFSDCTVSVIQILDNADAAFSILGAELRIVLSATTMFADKPHRLKGRTN
Ga0210382_103919901	3300021080	Groundwater Sediment	LKAATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTTMYADKPHRL
Ga0179596_102718431	3300021086	Vadose Zone Soil	LKAATNLNFVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL
Ga0193719_100831861	3300021344	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL
Ga0222623_104103542	3300022694	Groundwater Sediment	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL
Ga0193714_10380471	3300023058	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0137417_12752841	3300024330	Vadose Zone Soil	LEHHSANNQFLKAATNLNVVQSKLFQASRQDDLRFSDCTVSVIQILDDADAAFAFRILGAGLRTVLSVTTM
Ga0137417_13326284	3300024330	Vadose Zone Soil	LKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0207692_107818932	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	HRANQFLKAATLSQATRQDDPCFFDCTVSDIQILDDADVAFRISGAELRTVLSATTMLADKPHRQR
Ga0209240_10131556	3300026304	Grasslands Soil	LEHHSAIQFLKAATNLNFVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0257162_10069531	3300026340	Soil	LKAATNLNFVQSKLSQATRQDDHCFSDCTVSVIQILDDADVAFGISGAELRTVLSAITMLAEAAPPQRTN
Ga0257153_10989161	3300026490	Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFA
Ga0209648_100832011	3300026551	Grasslands Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDRRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0179587_109405481	3300026557	Vadose Zone Soil	LQTVTFDNFCAISLATALKHHSANQFLRAATNLNVVQPKLLQASRQDDHRFSDCTVSVIQILDDADRAFRILGAELRTVLSATTMFADKPHRL
Ga0208992_10432321	3300027176	Forest Soil	LKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0208997_10280712	3300027181	Forest Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMYADKPHRL
Ga0209213_10267671	3300027383	Forest Soil	ATNLNVVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL
Ga0208995_10154502	3300027388	Forest Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTT
Ga0208995_10892291	3300027388	Forest Soil	LKAATNLNVVQPKLFQATRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTT
Ga0208993_10185702	3300027480	Forest Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0209735_10140292	3300027562	Forest Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRMRAA
Ga0208988_10272301	3300027633	Forest Soil	ATALEHHSANQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0208990_11010661	3300027663	Forest Soil	LTTPLEHHSAIQFLKAATNLNVVQPKLFQASRQHDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL
Ga0208981_10089251	3300027669	Forest Soil	LKAATNLNVVQPKLFQATRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMF
Ga0208981_10150683	3300027669	Forest Soil	LKAATNLNVVQPKLFQASRQDDRRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTMYADKPHRL
Ga0209588_11134482	3300027671	Vadose Zone Soil	VTFDNFCAISLTTPLEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL
Ga0209118_10489663	3300027674	Forest Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTM
Ga0209701_103515532	3300027862	Vadose Zone Soil	LKAATNLNVVQPKLFQATRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRR
Ga0307322_101598391	3300028710	Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0307280_104146381	3300028768	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKSHRLNGRTSA
Ga0307278_100706101	3300028878	Soil	LFDNFCAISLTTALEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL
Ga0307277_100762562	3300028881	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAGLRTVLSVTTMFADKPHRLNGRTSA
Ga0307277_102065841	3300028881	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQHDHRFSDCTVSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0307308_100123703	3300028884	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTVSVIQILDDADGAFRILGAELRTVLSATTTYADKPHRH
Ga0308199_11115141	3300031094	Soil	LEHHSAIQFLKAATNLNVVQPKLFQASRQDDHRFSDCTLSVIQILDDADAAFRILGAELRTVLSATTMFADKPHSL
Ga0170824_1176064661	3300031231	Forest Soil	LKAATNLNFVQPKLFQTSRQDDLRLSDCTVSIQILDDADVAFRISGAELRTVLSATTMLADRPHRLNVFSRSC
Ga0307513_107672081	3300031456	Ectomycorrhiza	LEHHSAIQFLKAATNLNVVQPKLFQATRQDDLRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL
Ga0310686_1091717702	3300031708	Soil	LKAATNLNFVQPKPFQATRQDDLRFSDCTVSVIQILDDADVAFRISGAECGPFYSATMLADRPHRLNVLTILPPVTALAVG
Ga0307471_1032170721	3300032180	Hardwood Forest Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAAFRILGAELRTVLSTTTMFADKPHSL
Ga0370548_078385_312_542	3300034644	Soil	LEHHSANQFLKAATNLNVVQPKLFQASRQDDLRFSDCTVSVIQILDDADAASRILGAELRTVLSATTMFADKPHSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075150

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences