Metagenome / Metatranscriptome Family F075003

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075003
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	102 residues
Representative Sequence	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Number of Associated Samples	106
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.83 %
% of genes near scaffold ends (potentially truncated)	34.45 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.235 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.605 % of family members)
Environment Ontology (ENVO)	Unclassified (45.378 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.185 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.70% β-sheet: 0.00% Coil/Unstructured: 40.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.44.1.1: Ammonium transporter	d1u7ga_	1u7g	0.599
c.93.1.0: automated matches	d5kc8a_	5kc8	0.59345
a.195.1.1: YutG-like	d1y9ia_	1y9i	0.59084
c.93.1.1: L-arabinose binding protein-like	d3hsya_	3hsy	0.58688
a.111.1.3: Chloroperoxidase	d1vnsa_	1vns	0.58303

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04952	AstE_AspA	52.94
PF01546	Peptidase_M20	3.36
PF02633	Creatininase	1.68
PF08352	oligo_HPY	1.68
PF02617	ClpS	0.84
PF07687	M20_dimer	0.84
PF02668	TauD	0.84
PF05977	MFS_3	0.84
PF01738	DLH	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	1.68
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.23 %
Unclassified	root	N/A	11.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.42 %
Unclassified	root	N/A	11.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	15.13 %
Unclassified	root	N/A	11.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.52 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.81 %
Unclassified	root	N/A	11.76 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	2.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.68 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.84 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.81 %
Unclassified	root	N/A	11.76 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	2.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.68 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.84 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.81 %
Unclassified	root	N/A	11.76 %
Reyranella massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	2.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.68 %
Ramlibacter humi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter humi	0.84 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01CTPCK	Not Available	653	Open in IMG/M
3300003321\|soilH1_10159678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1366	Open in IMG/M
3300004114\|Ga0062593_100207955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1567	Open in IMG/M
3300004463\|Ga0063356_104120594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	625	Open in IMG/M
3300004480\|Ga0062592_100405622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1086	Open in IMG/M
3300005093\|Ga0062594_100068855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1935	Open in IMG/M
3300005327\|Ga0070658_11233372	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300005329\|Ga0070683_100122110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2461	Open in IMG/M
3300005333\|Ga0070677_10853914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300005340\|Ga0070689_100383741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1185	Open in IMG/M
3300005340\|Ga0070689_100798117	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300005353\|Ga0070669_101039678	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005356\|Ga0070674_100995001	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005364\|Ga0070673_100979786	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005365\|Ga0070688_100198920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1401	Open in IMG/M
3300005437\|Ga0070710_10671937	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300005439\|Ga0070711_102020845	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300005441\|Ga0070700_100179603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1472	Open in IMG/M
3300005456\|Ga0070678_101336490	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300005515\|Ga0077122_10603896	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300005530\|Ga0070679_100286861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1598	Open in IMG/M
3300005531\|Ga0070738_10000440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	120085	Open in IMG/M
3300005535\|Ga0070684_100301035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1471	Open in IMG/M
3300005544\|Ga0070686_101752088	Not Available	528	Open in IMG/M
3300005548\|Ga0070665_100050234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4185	Open in IMG/M
3300005563\|Ga0068855_102535903	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300005578\|Ga0068854_101772850	Not Available	566	Open in IMG/M
3300005614\|Ga0068856_100314552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1583	Open in IMG/M
3300005614\|Ga0068856_101750361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300005617\|Ga0068859_100921025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	958	Open in IMG/M
3300005712\|Ga0070764_10762597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300005842\|Ga0068858_101393662	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300005844\|Ga0068862_102070682	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300006058\|Ga0075432_10178935	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300006237\|Ga0097621_100754427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300008886\|Ga0115930_1000799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	31762	Open in IMG/M
3300009094\|Ga0111539_10252508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2053	Open in IMG/M
3300009101\|Ga0105247_10655217	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300009156\|Ga0111538_10968955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300009156\|Ga0111538_11911502	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300009156\|Ga0111538_12613597	Not Available	633	Open in IMG/M
3300009177\|Ga0105248_12978949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300009545\|Ga0105237_10965603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300009551\|Ga0105238_10231503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	1824	Open in IMG/M
3300009551\|Ga0105238_12437147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300009840\|Ga0126313_11068556	Not Available	663	Open in IMG/M
3300010371\|Ga0134125_10167361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2449	Open in IMG/M
3300010371\|Ga0134125_10494218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1355	Open in IMG/M
3300010396\|Ga0134126_12641719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300010397\|Ga0134124_12314639	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300010401\|Ga0134121_12400486	Not Available	568	Open in IMG/M
3300010403\|Ga0134123_11073876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	826	Open in IMG/M
3300011418\|Ga0153954_1135074	Not Available	613	Open in IMG/M
3300012469\|Ga0150984_100775586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter humi	953	Open in IMG/M
3300012955\|Ga0164298_11268175	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300012957\|Ga0164303_10875876	Not Available	626	Open in IMG/M
3300012984\|Ga0164309_10644467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	833	Open in IMG/M
3300012986\|Ga0164304_11338681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300012988\|Ga0164306_10589152	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300013102\|Ga0157371_10813549	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300013104\|Ga0157370_10964954	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300013307\|Ga0157372_10081515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	3662	Open in IMG/M
3300013307\|Ga0157372_10463715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1476	Open in IMG/M
3300014969\|Ga0157376_12361588	Not Available	571	Open in IMG/M
3300015371\|Ga0132258_10759154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2443	Open in IMG/M
3300015371\|Ga0132258_10813463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2356	Open in IMG/M
3300015374\|Ga0132255_103681143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300020027\|Ga0193752_1099709	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300020034\|Ga0193753_10382988	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300020082\|Ga0206353_10639012	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300021976\|Ga0193742_1064910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1463	Open in IMG/M
3300025302\|Ga0207426_1049282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1261	Open in IMG/M
3300025898\|Ga0207692_10376039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	881	Open in IMG/M
3300025909\|Ga0207705_10547409	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300025912\|Ga0207707_11304360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300025918\|Ga0207662_10547115	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300025921\|Ga0207652_10341627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1351	Open in IMG/M
3300025923\|Ga0207681_10710436	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300025925\|Ga0207650_10227624	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300025932\|Ga0207690_10237410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis	1402	Open in IMG/M
3300025936\|Ga0207670_10083667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2239	Open in IMG/M
3300025936\|Ga0207670_11184939	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300025937\|Ga0207669_11375190	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300025938\|Ga0207704_11562406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300025944\|Ga0207661_10126629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2182	Open in IMG/M
3300025945\|Ga0207679_10754377	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300025949\|Ga0207667_10386573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1425	Open in IMG/M
3300025960\|Ga0207651_10493877	Not Available	1057	Open in IMG/M
3300025981\|Ga0207640_11461090	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300026023\|Ga0207677_11117174	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300026035\|Ga0207703_11385713	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300026041\|Ga0207639_10263828	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300026075\|Ga0207708_10568778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300026088\|Ga0207641_11387584	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300026095\|Ga0207676_11676390	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300026116\|Ga0207674_10040460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4828	Open in IMG/M
3300026121\|Ga0207683_11277621	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300026142\|Ga0207698_12517255	Not Available	525	Open in IMG/M
3300027870\|Ga0209023_10676038	Not Available	597	Open in IMG/M
3300027879\|Ga0209169_10121976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1352	Open in IMG/M
3300027965\|Ga0209062_1001911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	31376	Open in IMG/M
3300031538\|Ga0310888_10886210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300031562\|Ga0310886_11109738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031716\|Ga0310813_10069048	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300031716\|Ga0310813_10337614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1280	Open in IMG/M
3300031716\|Ga0310813_11950627	Not Available	553	Open in IMG/M
3300031847\|Ga0310907_10800616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300031858\|Ga0310892_10139597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1389	Open in IMG/M
3300031908\|Ga0310900_11003403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300031938\|Ga0308175_101824866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300031938\|Ga0308175_102801728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300031939\|Ga0308174_10491231	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300031996\|Ga0308176_10669656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1074	Open in IMG/M
3300032122\|Ga0310895_10275019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	787	Open in IMG/M
3300032144\|Ga0315910_10536166	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300032896\|Ga0335075_11242834	Not Available	642	Open in IMG/M
3300033412\|Ga0310810_10185455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2371	Open in IMG/M
3300033475\|Ga0310811_10547450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1188	Open in IMG/M
3300033475\|Ga0310811_11166987	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.26%
Host-Associated	Host-Associated	47.90%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.42%
Plants	Host-Associated → Plants	46.22%
Aquatic	Environmental → Aquatic	0.84%
Microbial	Host-Associated → Microbial	0.84%
Fungi	Host-Associated → Fungi	0.84%
Solid Waste	Engineered → Solid Waste	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.17%
Roots	Host-Associated → Plants → Roots	1.68%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Bacteria	Host-Associated → Microbial → Bacteria	0.84%
Mycelium	Host-Associated → Fungi → Mycelium	0.84%
Grass	Engineered → Solid Waste → Grass	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.77%
Loam	Environmental → Terrestrial → Soil → Loam	16.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.52%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.68%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.84%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified	0.84%
Endophytes	Host-Associated → Plants → Roots → Endophytes	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.84%
Composting	Engineered → Solid Waste → Grass → Composting	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.84%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.04%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.68%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Micrasterias Crux-Melitensis (Mzch 98) Associated	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Micrasterias Crux-Melitensis (Mzch 98) Associated	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.84%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.84%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.84%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005515	Combined assembly of arab plate scrape MF_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300008886	Microbial communities associated with unicellular green alga Micrasterias crux-melitensis, Germany - (MZCH: 98)	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021976	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1	Environmental	Open in IMG/M
3300025302	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00072160	2170459017	Switchgrass, Maize And Mischanthus Litter	MLRLSIASALLLALSAPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRTICDATCGCVADQAQTQVTPADMYALDEAAAAGRTTETMQKIRGYFPNCAKKAARMP
soilH1_101596781	3300003321	Sugarcane Root And Bulk Soil	MLRLSIASALLLALSVPAWADWTQAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0062593_1002079552	3300004114	Soil	MLRLSIAAALLLALCVPASANWTRAQRAHFLDQCVESCQSTLNLPDAKRRVCDATCGCVADQAETQVTPADMDALDEAAAAGRTTETMQKIRGFFPACARRATRMP*
Ga0063356_1041205942	3300004463	Arabidopsis Thaliana Rhizosphere	MLRLSIAAILLLTPCVPASANWTRAQREHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPAEMYALDEAAAAGRTTETMQKIRGFFPTCAKKSARMP*
Ga0062592_1004056223	3300004480	Soil	LLLTLCAPASANWTRAQREHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPADMDALDEAAAAGRTTETMQKIRGFFPACARRATRMP*
Ga0062594_1000688551	3300005093	Soil	VPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0070658_112333722	3300005327	Corn Rhizosphere	MLRLSIVSALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0070683_1001221102	3300005329	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0070677_108539142	3300005333	Miscanthus Rhizosphere	LRLSIAAALLLALSLPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0070689_1003837411	3300005340	Switchgrass Rhizosphere	MLRLSIAAALLLALSLPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0070689_1007981172	3300005340	Switchgrass Rhizosphere	MLRLSLAILLLLALGTPASANWTRAQRTHFLDQCIASCQATPNMPEARRGVCDKTCSCVADEAETQVTPADMDAIEEAAAAGRTTDAMQKIRSFLPVCARKVMRRENRP*
Ga0070669_1010396781	3300005353	Switchgrass Rhizosphere	MLRLSLAALLLLAGATAASANWTRAQRAHFLGQCVESCQSTLQLPDARRAVCDRTCGCVADQAETQVTPAEMDALDEAAAAGGTTETMQKIRGFFPACA
Ga0070674_1009950011	3300005356	Miscanthus Rhizosphere	MLRLSIAAALLLALSVPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFP
Ga0070673_1009797862	3300005364	Switchgrass Rhizosphere	MLRLSIAAALLLALSVPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQRIRGLF
Ga0070688_1001989203	3300005365	Switchgrass Rhizosphere	MLRLSIAAALLLALSVPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0070710_106719371	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLSIASALLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPGDMYAIDEAAAAGRTTETMQKIRGYFPSCAKKAVRMP*
Ga0070711_1020208451	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKI
Ga0070700_1001796033	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	HFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0070678_1013364902	3300005456	Miscanthus Rhizosphere	MLRLSIASALLLALSAPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQTETQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0077122_106038961	3300005515	Arabidopsis Root	MLRLSIACVLVLAVSLPASANWTRAQRAQFLGQCVESCQSTLNLPDSKRRVCDATCGCVADQAETLVTPADMYALDEAAAAGRTTETMQKI
Ga0070679_1002868612	3300005530	Corn Rhizosphere	MLRLSIASALLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYALDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0070738_1000044052	3300005531	Surface Soil	MLRLSIASALLLMLSMPAWADWTQAQRTHFLGQCIESCQTTLKLPDAKRKICDETCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPSCAKKAVRMP*
Ga0070684_1003010352	3300005535	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPAEMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0070686_1017520882	3300005544	Switchgrass Rhizosphere	MLRLSLAALLLLAAATAASANWTRAQRAHFLGQCVESCQSTLQLPDSRRSVCDRTCGCVADQAETQVTPAEMDALDEAAAAGRTTETM
Ga0070665_1000502342	3300005548	Switchgrass Rhizosphere	MLRLSIASALLLALSLPASADWTQAQRARFLGQCVESCQTTLKLPDSRRRVCDATCGCVADQTETQVTPADMYAIDEAAAAGRTTETMQKIRGYFPGCAKKAIRIP*
Ga0068855_1025359032	3300005563	Corn Rhizosphere	MLRLSIASALLLMLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0068854_1017728501	3300005578	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIDEAAATGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0068856_1003145523	3300005614	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAARMP*
Ga0068856_1017503611	3300005614	Corn Rhizosphere	AQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIVEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0068859_1009210251	3300005617	Switchgrass Rhizosphere	RAHFLAQCVESCQTTLKLPEDRRAVCDRTCGCVADQAETQVTPDDMYAFDEAVAAGRTTETMQKIRGFFPTCAKKSARMP*
Ga0070764_107625972	3300005712	Soil	MLRLSIASALLLALSVPASADWTQAQRTRFLGQCVESCQSTLRLPDSKLKVCNETCGCVADQAETTVTPADMYAIDEAAAAGQTTEAMQKIRGYFPGCAKKSIRIP*
Ga0068858_1013936621	3300005842	Switchgrass Rhizosphere	MLRLSLAALLLLALGMPAAANWTRAQRTHFLDQCIASCQSTPNLPEARRGVCDKTCSCVADEAETQVTPADMDAIEEAAAAGRTTDAMQKIRSFLPVCARKVMRRENRP*
Ga0068862_1020706821	3300005844	Switchgrass Rhizosphere	MLRLSLAALLLLAAATAASANWTRAQRAHFLGQCVESCQSTLQLPDSRRSVCDRTCGCVADQAETQVTPAEMDAHDEAAAAGRATETMQKIRGFFPACA
Ga0075432_101789351	3300006058	Populus Rhizosphere	MLRLSIAAILLLTPCVPASANWTRAQREHFLGQCVESCQSTLHLPDSRRRVCDATCGCVADQAETQVTPAEMYALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0097621_1007544272	3300006237	Miscanthus Rhizosphere	MLRLSIAAALLLALCVPASANWTRAQRAHFLDQCVESCQSTLNLPDAKRRVCDATCGCVADQAETQVTPADMDALDEAAAAGRTTETMQKIRGYFPACAKRATRMP*
Ga0115930_10007995	3300008886	Micrasterias Crux-Melitensis (Mzch 98) Associated	MLRLAIASLLLPALSLPASANWTRAQREQFLGQCVESCQSTLKLPDSKRRVCDATCGCVADQAETQVTPADMYALDEAAAAGRTTETMQKIRGFFPACAKRAARMP*
Ga0111539_102525084	3300009094	Populus Rhizosphere	MLRLSIAAALLLALSVPASANWTRAQREHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPAEMYALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0105247_106552171	3300009101	Switchgrass Rhizosphere	MQRLLAVVLLVALSSPASANWTRAQRAQFLSECVESCQSTLKLPDSKLGRCNATCGCVADQTETTVTPAEMDAVDEAAAAGRTTETMQKIRGFFPACAKRAVRIP*
Ga0111538_109689552	3300009156	Populus Rhizosphere	MPRLSIASALLLLALAVPASANWTRAQRAHFLDQCIASCRSTADLPEARRGVCEPTCGCVADEAETQVTPADMDAIDEAAAAGRTTEAMQKIRSFLPVCARKMIRRENRP*
Ga0111538_119115021	3300009156	Populus Rhizosphere	MLRLSIAAALLLALSLPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKI
Ga0111538_126135972	3300009156	Populus Rhizosphere	MLRLSIAAILLLTPCVPASANWTRAQREHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPAEMYALDVAFTAARTTETMQKIRGFFPACAKRATRIP*
Ga0105248_129789492	3300009177	Switchgrass Rhizosphere	AFGLPASANWTRAQRAQFLGQCVESCQSTLNLTDSKRRVCDATCGCVADQAETLVTPADMYALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0105237_109656032	3300009545	Corn Rhizosphere	LLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0105238_102315031	3300009551	Corn Rhizosphere	AQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0105238_124371472	3300009551	Corn Rhizosphere	TLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0126313_110685562	3300009840	Serpentine Soil	MLRLLAAVLVVALSSPASADWTRAQRAHFLGQCVESCRSTAKLPESKLGLCDSTCGCVADQTETTVTPAEIDAVDEAAAAGRTTEAMLKIRSYFPGCARKAVRMP*
Ga0134125_101673613	3300010371	Terrestrial Soil	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0134125_104942182	3300010371	Terrestrial Soil	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPGDMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0134126_126417191	3300010396	Terrestrial Soil	LLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0134124_123146392	3300010397	Terrestrial Soil	VAAVWHQRTHFLDQCIASCQSTPNLPEARRGVCDKTCSCVADEAETQVTPADMDAIEEAAAVGRTTEAMQKIRSFLPVCARKVMRRENRP*
Ga0134121_124004862	3300010401	Terrestrial Soil	MLRLSLAALLLVVLGLPASANWTRAQRTHFLDQCIASCQAAPNLPEARRSVCDKTCSCVADEAETQVTPADMDAIEEAAAAGRTTDAMQKIRSFLPVCARKVMRRENRP*
Ga0134123_110738762	3300010403	Terrestrial Soil	MLRLSLAALLLLALGMPAAANWTRAQRTHFLDQCIASCQSTPNLPEARRGVCDKTCSCVADEAETQVTPADMDAIEAAAAAGRTTDAMQKIRSFLPVCARKVMRRENRP*
Ga0153954_11350742	3300011418	Attine Ant Fungus Gardens	MLRLSIASALLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDSKRRICDATCGCVADQAQTQVTPGDMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0150984_1007755862	3300012469	Avena Fatua Rhizosphere	MLRLSIACVLVLAFSLPASANWTRAQRAQFLGQCVESCQSTLKLPEARRGVCDATCGCVADQAETQVTPADMYALDEAAAAGRTTETMQKI
Ga0164298_112681751	3300012955	Soil	MLRLSIASALLLALSVPAWADWTQAQRTPFLGQCVESCQDPLTLPASTRQLCDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0164303_108758761	3300012957	Soil	MLRLSIASALLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYALDEAAAAGRTTETMQKIRGYFPNCAKKAARMP*
Ga0164309_106444672	3300012984	Soil	MLRLSIASALLLTLGVPAWADWTQAQRTHFLGQCVESCQDTLKLPDSKRQICDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRSYFPNCAKKAARMP*
Ga0164304_113386812	3300012986	Soil	MLRLSIASALLLALSLPASADWTQAQRTHFLGQCVESCQDTLKLPDAKRTICDATCGCVADQAQTQVTPADMYALDEAAAAGRTTETMQKIRGYFPNCAKKAARMP*
Ga0164306_105891521	3300012988	Soil	MLRLSIASALLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDTTCGCVADQAQTTVTPGDMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAARMP*
Ga0157371_108135492	3300013102	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAVAAGRTTETMQKIRGYFPNCAKKAARMP*
Ga0157370_109649542	3300013104	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWSRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0157372_100815151	3300013307	Corn Rhizosphere	RAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0157372_104637151	3300013307	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRTICDATCGCVADQAQTQVTPADMYALDEAAAAGRTTET
Ga0157376_123615881	3300014969	Miscanthus Rhizosphere	MLRLSLAALLLLATAASASANWTRAQRTHFLGQCVESCQSTLKLPDSNRAVCDRTCGCVADQAETQVTPADMDAIEEAAAAGRTTDAMQKIRSFLPVCARKV
Ga0132258_107591544	3300015371	Arabidopsis Rhizosphere	MLRLSIAAILLLTPCVPASANWTRAQREHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPAEMYALDEAAAAGRTTETMQKIRGFFPACAKKSARMP*
Ga0132258_108134632	3300015371	Arabidopsis Rhizosphere	MLRLSIVSALLLTLSVPASADWTRAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0132255_1036811432	3300015374	Arabidopsis Rhizosphere	TLSVPASADWTRAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP*
Ga0193752_10997092	3300020027	Soil	MLRLLFAVLLIALSSPAAADWTRAQRAHFLGQCVESCRSTAKLPESKLGLCDSTCGCVADQTETTVTPAEIDAVDEAAAAGRTTEAMLKIRSYFPACAKKAVRIP
Ga0193753_103829881	3300020034	Soil	MLRLLFAVLLIALSSPAAADWTRAQRAHFLGQCVESCRSTAKLPESKLGLCDSTCGCVADQTETTVTPAEIDAVDEAAAAGRTTEAMLKIRSYFPAC
Ga0206353_106390122	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0193742_10649102	3300021976	Soil	MLRLSSASALILALSAPAYADWTRAQRAHFLDQCVESCRAALKLPDSKRRVCDATCGCVADQTETQVTPDDIYAIDEAAAAGRTTEAMQKIRGYFPGCAKKAVKFP
Ga0207426_10492823	3300025302	Arabidopsis Rhizosphere	MLRLSIACVLVLAVSLPASANWTRAQRAQFLGQCVESCQSTLNLPDSKRRVCDATCGCVADQAETLVTPADMYALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0207692_103760392	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLRLSIASALLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0207705_105474091	3300025909	Corn Rhizosphere	MLRLSIVSALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAARMP
Ga0207707_113043602	3300025912	Corn Rhizosphere	PASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0207662_105471152	3300025918	Switchgrass Rhizosphere	MLRLSIAAALLLALSLPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0207652_103416272	3300025921	Corn Rhizosphere	MLRLSIASALLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYALDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0207681_107104362	3300025923	Switchgrass Rhizosphere	MLRLSIAAALLLALCVPASANWTRAQRAHFLDQCVESCQSTLNLPDAKRRVCDATCGCVADQAETQVTPADMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0207650_102276242	3300025925	Switchgrass Rhizosphere	MLRLSLAILLLLALGTPASANWTRAQRTHFLDQCIASCQATPNMPEARRGVCDKTCSCVADEAETQVTPADMDAIEEAAAAGCTTDAMQKIRSFLPVCARKVMRRENRP
Ga0207690_102374102	3300025932	Corn Rhizosphere	MLRLSIASALLLALSVPAWADWTQAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPADMYALDEAAAAGRTTETMQKIRSYFPNCAKKAARMP
Ga0207670_100836673	3300025936	Switchgrass Rhizosphere	MLRLSIAAALLLALSLPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGAMDALDEASAAARTTETMQKIRGFFPACAKKSARMP
Ga0207670_111849392	3300025936	Switchgrass Rhizosphere	MLRLSLAILLLLALGTPASANWTRAQRTHFLDQCIASCQATPNMPEARRGVCDKTCSCVADEAETQVTPADMDAIEEAAAAGRTTDAMQKIRSFLPVCARKVMRRENRP
Ga0207669_113751901	3300025937	Miscanthus Rhizosphere	MLRLSIAAALLLALSVPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSA
Ga0207704_115624061	3300025938	Miscanthus Rhizosphere	ASANWTRAQRAHFLDQCVESCQSTLNLPDAKRRVCDATCGCVADQAETQVTPADMDALDESAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0207661_101266292	3300025944	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAARMP
Ga0207679_107543771	3300025945	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPAEMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0207667_103865732	3300025949	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPGDMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0207651_104938771	3300025960	Switchgrass Rhizosphere	MLRLSIAAALLLALSVPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTET
Ga0207640_114610902	3300025981	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAATGRTTETMQKIRGYFPNCAKKAVRMP
Ga0207677_111171742	3300026023	Miscanthus Rhizosphere	MLRLSIASALLLALSLPASADWTQAQRARFLGQCVESCQTTLKLPDSRRRVCDATCGCVADQTETQVTPADMYAIDEAAAAGRTTETMQKIRGYFPGCAKKAIRIP
Ga0207703_113857131	3300026035	Switchgrass Rhizosphere	MLRLSLAALLLLALGMPAAANWTRAQRTHFLDQCIASCQSTPNLPEARRGVCDKTCSCVADEAETQVTPADMDAIEEAAAAGRTTDAMQKIRSFLPVCARKVMRRENRP
Ga0207639_102638281	3300026041	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLRLPDAKRKICDATCGCVADQAQTTVTPGDMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0207708_105687783	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0207641_113875842	3300026088	Switchgrass Rhizosphere	MLRLSLAAVLLFALGSPASANWTRAQRANFLSQCVESCQSTLKLPDSQLGKCNATCGCVADQTETTVTPAEIDAVDEAAAAGRTTEAMLKIRSYFPG
Ga0207676_116763901	3300026095	Switchgrass Rhizosphere	MLRLSIAAALLLALSLPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETM
Ga0207674_100404606	3300026116	Corn Rhizosphere	MLRLSIASALLLTLSVPASADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTQVTPAEMYAIDEAAAAGSTAETMQKIRGYFPNCAKKAVRMP
Ga0207683_112776211	3300026121	Miscanthus Rhizosphere	MLRLSIAAALLLALSVPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0207698_125172552	3300026142	Corn Rhizosphere	MLRLSLAALLLLATAASASANWTRAQRTHFLGQCVESCQSTLKLPDSNRAVCDRTCGCVADQAETQVTPADMDAVEEAAAAGRTTETMQ
Ga0209023_106760381	3300027870	Freshwater And Sediment	MPRLLAAVLLVALSSPASANWTRAQRALFLSQCVESCQSTLKLPESKLGACNATCGCVADQTETTVTPAEMDAVEEAAAAGRTTETMQRIRSYFPSCAKKAVRIP
Ga0209169_101219764	3300027879	Soil	MLRLSIASALLLALSVPASADWTQAQRTRFLGQCVESCQSTLRLPDSKLKVCNETCGCVADQAETTVTPADMYAIDEAAAAGQTTEAMQKIRGYFPGCAKKSIRIP
Ga0209062_100191117	3300027965	Surface Soil	MLRLSIASALLLMLSMPAWADWTQAQRTHFLGQCIESCQTTLKLPDAKRKICDETCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPSCAKKAVRMP
Ga0310888_108862101	3300031538	Soil	LSIAAALLLALSVPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0310886_111097382	3300031562	Soil	TRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0310813_100690483	3300031716	Soil	MLRLSLAILLLLALGTPASANWTRAQRTHFLDQCIASCQATPNMPEARRGVCDKTCSCVADQAETQVTPADMDAIEEAAAAGRTTDAMQKIRSFLPVCARKVMRRENRP
Ga0310813_103376142	3300031716	Soil	MLRLSIAAILLLTPCVPASANWTRAQREHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPAEMYALDEAAAAGRTTETMQKIRGFFPTCAKKSARMP
Ga0310813_119506271	3300031716	Soil	MLRLPFAVILLLALSLPASANWTRAQRAHFLAQCVESCQTTLKLPEDRRAVCDRTCGCVADQAETQVTPDDMYAFDEAVAAGRTTETMQKIRGFFPACARRAFRIP
Ga0310907_108006162	3300031847	Soil	NWTRAQREHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPAEMYALDEAAAAGRTTETMQKIRGFFPTCAKKSARMP
Ga0310892_101395973	3300031858	Soil	LLLALSLPASANWTRAQRAHYLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0310900_110034032	3300031908	Soil	PMLRLSIAAALLLALSLPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDALDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0308175_1018248661	3300031938	Soil	GRGPLLKSDPMLRLSIAAVLLLAFSLPASANWTRAQREHFLGQCVESCQSTLKLPESKQSVCNATCGCVADQAETQVTPADMYAVDEAAAAGRTTETMQKIRGFFPACAKKAGRMP
Ga0308175_1028017282	3300031938	Soil	SADWTRAQRNHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0308174_104912311	3300031939	Soil	MLRLSIASALLLALSVPAWADWTQAQRNHFIGQCVESCQDTLKPPDAKRKICDATCGCVADQAQTTVTPGDMYALDEAAAVGRTTETMQKIRGYFPGCAKKAVRMP
Ga0308176_106696562	3300031996	Soil	MLRLSIASALLLALSVPASADWTQAQRNHFIGQCVESCQDTLKPPDAKRKICDATCGCVADQAQTTVTPADMYALDEAAAAGRTTETMQKIRGYFPGCAKKAVRMP
Ga0310895_102750192	3300032122	Soil	MLRLSIAAALLLALSLPASANWTRAQRAHFLGQCVESCQSTLNLPDSRRRVCDATCGCVADQAETQVTPGDMDAHDEAAAAGRTTETMQKIRGFFPACAKKSARMP
Ga0315910_105361662	3300032144	Soil	MLRLSLAALLLLALGAPASANWTRAQRTHFLDQCIASCQATPNLPEARRGVCDKTCSCVADEAETQVTPADMDAIEEAAAAGRTTDAMQKIRSFLPVCARKVMRRENRP
Ga0335075_112428342	3300032896	Soil	MLRLPLATLLLLATAAPASANWTRAQRTHFLDQCVASCQSAPGVAEPRREMCDKTCGCVADEAETQITPTDMYAIEEAAAAGRTTEAMQRIQGFLPVCARKVMRRQNRP
Ga0310810_101854552	3300033412	Soil	MLRLSIAAALLLALCVPASANWTRAQRAHFLDQCVESCQSTLNLPDAKRRVCDATCGCVADQAETQVTPADMDALDEAAAAGRTTETMQKIRGYFPACAKRATRMP
Ga0310811_105474502	3300033475	Soil	MLRLSIVSALLLTLSVPASADWTRAQRTHFLGQCVESCQDTLKLPDAKRKICDATCGCVADQAQTTVTPADMYAIDEAAAAGRTTETMQKIRGYFPNCAKKAVRMP
Ga0310811_111669871	3300033475	Soil	MLRLSIASVLLLALSLPAAADWTQAQRARFLGQCVESCQTTLRLPDDKRRVCDATCGCVADQTETQVTPADMYAIDEAAAAGRSTETMQKIRGYFPGCAKKAARMP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075003

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences