Metagenome / Metatranscriptome Family F074965

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074965
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	62 residues
Representative Sequence	MFVGYEGYIAVAICLFCTWLGYTQGKRNGIENALDGMIELKLLKVLNNGEIVAGSNLKTK
Number of Associated Samples	87
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.83 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	64.71 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (49.580 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (37.815 % of family members)
Environment Ontology (ENVO)	Unclassified (62.185 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.160 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.91% β-sheet: 6.82% Coil/Unstructured: 52.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF05257	CHAP	18.49
PF11750	DUF3307	13.45
PF02622	DUF179	4.20
PF14743	DNA_ligase_OB_2	1.68
PF00848	Ring_hydroxyl_A	1.68
PF00793	DAHP_synth_1	1.68
PF00478	IMPDH	0.84
PF00268	Ribonuc_red_sm	0.84
PF01764	Lipase_3	0.84
PF00924	MS_channel	0.84
PF02348	CTP_transf_3	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	4.20
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	3.36
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	0.84
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.84
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.42 %
Unclassified	root	N/A	49.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
cellular organisms	root	All Organisms → cellular organisms	42.02 %
Viruses	superkingdom	All Organisms → Viruses	8.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.72 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	27.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.36 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.68 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	25.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.52 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.68 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.68 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	25.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.72 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.84 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	25.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.72 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	1.68 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.68 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.84 %
Pelagophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	25.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.72 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	1.68 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1.68 %
Candidatus Endolissoclinum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum	0.84 %
Pelagomonadales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	25.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.72 %
Vellamovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Vellamovirus	1.68 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	1.68 %
unclassified Candidatus Endolissoclinum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum	0.84 %
Pelagomonas	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.58 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	25.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.72 %
Vellamovirus rhodeisland44	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Vellamovirus → Vellamovirus rhodeisland44	1.68 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1.68 %
Candidatus Endolissoclinum sp. TMED37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	0.84 %
Pelagomonas calceolata	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876004\|none_p0235199	Not Available	520	Open in IMG/M
3300001460\|JGI24003J15210_10003733	Not Available	6598	Open in IMG/M
3300001472\|JGI24004J15324_10008737	All Organisms → cellular organisms → Bacteria	3729	Open in IMG/M
3300001949\|GOS2238_1018586	Not Available	1548	Open in IMG/M
3300003346\|JGI26081J50195_1033791	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1086	Open in IMG/M
3300005837\|Ga0078893_11682554	Not Available	2847	Open in IMG/M
3300005837\|Ga0078893_13561142	Not Available	651	Open in IMG/M
3300006345\|Ga0099693_1002329	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1844	Open in IMG/M
3300006735\|Ga0098038_1195220	Not Available	657	Open in IMG/M
3300006925\|Ga0098050_1015785	All Organisms → Viruses → Predicted Viral	2146	Open in IMG/M
3300008964\|Ga0102889_1093534	Not Available	894	Open in IMG/M
3300009428\|Ga0114915_1010363	All Organisms → cellular organisms → Bacteria	3568	Open in IMG/M
3300009447\|Ga0115560_1339307	Not Available	570	Open in IMG/M
3300009550\|Ga0115013_10152921	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1353	Open in IMG/M
3300009550\|Ga0115013_10334157	Not Available	948	Open in IMG/M
3300010149\|Ga0098049_1120433	Not Available	816	Open in IMG/M
3300012920\|Ga0160423_10001100	Not Available	22562	Open in IMG/M
3300012920\|Ga0160423_10003080	Not Available	13897	Open in IMG/M
3300012920\|Ga0160423_10512888	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	815	Open in IMG/M
3300012920\|Ga0160423_10538132	Not Available	793	Open in IMG/M
3300012928\|Ga0163110_10439730	Not Available	984	Open in IMG/M
3300012928\|Ga0163110_10683176	Not Available	799	Open in IMG/M
3300012952\|Ga0163180_10003114	Not Available	9216	Open in IMG/M
3300012952\|Ga0163180_10228195	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300012952\|Ga0163180_11737799	Not Available	529	Open in IMG/M
3300012952\|Ga0163180_11941165	Not Available	501	Open in IMG/M
3300012953\|Ga0163179_10039496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3212	Open in IMG/M
3300012953\|Ga0163179_10047319	All Organisms → cellular organisms → Bacteria	2951	Open in IMG/M
3300012953\|Ga0163179_10107040	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2031	Open in IMG/M
3300012953\|Ga0163179_10230627	All Organisms → Viruses → Predicted Viral	1433	Open in IMG/M
3300012954\|Ga0163111_10034271	All Organisms → cellular organisms → Bacteria	3838	Open in IMG/M
3300012954\|Ga0163111_10040049	All Organisms → cellular organisms → Bacteria	3591	Open in IMG/M
3300012954\|Ga0163111_10311355	Not Available	1402	Open in IMG/M
3300017709\|Ga0181387_1066625	Not Available	723	Open in IMG/M
3300017710\|Ga0181403_1134158	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	516	Open in IMG/M
3300017738\|Ga0181428_1007681	Not Available	2453	Open in IMG/M
3300017741\|Ga0181421_1140478	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	625	Open in IMG/M
3300017743\|Ga0181402_1051974	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1104	Open in IMG/M
3300017744\|Ga0181397_1031800	All Organisms → Viruses → Predicted Viral	1514	Open in IMG/M
3300017745\|Ga0181427_1082834	Not Available	786	Open in IMG/M
3300017753\|Ga0181407_1049671	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1099	Open in IMG/M
3300017773\|Ga0181386_1153834	Not Available	702	Open in IMG/M
3300017776\|Ga0181394_1046657	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1468	Open in IMG/M
3300017818\|Ga0181565_10032867	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Vellamovirus → Vellamovirus rhodeisland44	3810	Open in IMG/M
3300017818\|Ga0181565_10671633	Not Available	659	Open in IMG/M
3300017949\|Ga0181584_10010260	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Vellamovirus → Vellamovirus rhodeisland44	6951	Open in IMG/M
3300017950\|Ga0181607_10184079	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1240	Open in IMG/M
3300017956\|Ga0181580_10229436	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1290	Open in IMG/M
3300017957\|Ga0181571_10044884	All Organisms → cellular organisms → Bacteria	3101	Open in IMG/M
3300017957\|Ga0181571_10249783	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1132	Open in IMG/M
3300017957\|Ga0181571_10544995	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	705	Open in IMG/M
3300018041\|Ga0181601_10130153	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1573	Open in IMG/M
3300018418\|Ga0181567_10076791	Not Available	2331	Open in IMG/M
3300019267\|Ga0182069_1289146	Not Available	1169	Open in IMG/M
3300019459\|Ga0181562_10000071	All Organisms → cellular organisms → Bacteria	67625	Open in IMG/M
3300020247\|Ga0211654_1032647	Not Available	813	Open in IMG/M
3300020247\|Ga0211654_1057007	Not Available	590	Open in IMG/M
3300020264\|Ga0211526_1001417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	4327	Open in IMG/M
3300020269\|Ga0211484_1070065	Not Available	628	Open in IMG/M
3300020274\|Ga0211658_1047916	Not Available	899	Open in IMG/M
3300020281\|Ga0211483_10102886	Not Available	942	Open in IMG/M
3300020281\|Ga0211483_10212255	Not Available	643	Open in IMG/M
3300020282\|Ga0211667_1039181	All Organisms → Viruses → Predicted Viral	1206	Open in IMG/M
3300020292\|Ga0211663_1063720	Not Available	542	Open in IMG/M
3300020347\|Ga0211504_1032914	Not Available	1303	Open in IMG/M
3300020377\|Ga0211647_10080855	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	1140	Open in IMG/M
3300020379\|Ga0211652_10003368	Not Available	4995	Open in IMG/M
3300020379\|Ga0211652_10008684	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	3084	Open in IMG/M
3300020379\|Ga0211652_10019112	All Organisms → Viruses → Predicted Viral	2053	Open in IMG/M
3300020387\|Ga0211590_10216657	Not Available	598	Open in IMG/M
3300020400\|Ga0211636_10021878	Not Available	2914	Open in IMG/M
3300020408\|Ga0211651_10120040	Not Available	1070	Open in IMG/M
3300020409\|Ga0211472_10029210	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2141	Open in IMG/M
3300020413\|Ga0211516_10004324	All Organisms → cellular organisms → Bacteria	9694	Open in IMG/M
3300020419\|Ga0211512_10031452	All Organisms → cellular organisms → Bacteria → FCB group	2631	Open in IMG/M
3300020420\|Ga0211580_10320013	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300020431\|Ga0211554_10167231	Not Available	1075	Open in IMG/M
3300020436\|Ga0211708_10032916	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1977	Open in IMG/M
3300020436\|Ga0211708_10060339	All Organisms → Viruses → Predicted Viral	1464	Open in IMG/M
3300020436\|Ga0211708_10194752	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	813	Open in IMG/M
3300020436\|Ga0211708_10390435	Not Available	570	Open in IMG/M
3300020438\|Ga0211576_10008144	All Organisms → cellular organisms → Bacteria	6785	Open in IMG/M
3300020438\|Ga0211576_10024645	Not Available	3606	Open in IMG/M
3300020438\|Ga0211576_10417665	Not Available	684	Open in IMG/M
3300020442\|Ga0211559_10252372	Not Available	827	Open in IMG/M
3300020446\|Ga0211574_10027940	All Organisms → Viruses → Predicted Viral	2616	Open in IMG/M
3300020448\|Ga0211638_10028638	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300020450\|Ga0211641_10315858	Not Available	761	Open in IMG/M
3300020451\|Ga0211473_10001181	Not Available	13461	Open in IMG/M
3300020451\|Ga0211473_10452754	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	655	Open in IMG/M
3300020452\|Ga0211545_10000454	All Organisms → cellular organisms → Bacteria	27591	Open in IMG/M
3300020455\|Ga0211664_10002998	Not Available	10386	Open in IMG/M
3300020463\|Ga0211676_10004919	Not Available	12466	Open in IMG/M
3300020463\|Ga0211676_10016190	Not Available	6099	Open in IMG/M
3300020463\|Ga0211676_10083902	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	2141	Open in IMG/M
3300020463\|Ga0211676_10296406	Not Available	924	Open in IMG/M
3300020469\|Ga0211577_10046289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3200	Open in IMG/M
3300020469\|Ga0211577_10116931	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1830	Open in IMG/M
3300020474\|Ga0211547_10320631	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	785	Open in IMG/M
3300021368\|Ga0213860_10036338	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2082	Open in IMG/M
3300021959\|Ga0222716_10059437	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2684	Open in IMG/M
3300022187\|Ga0196899_1201587	Not Available	527	Open in IMG/M
3300022921\|Ga0255765_1183003	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	949	Open in IMG/M
3300023173\|Ga0255776_10184096	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1301	Open in IMG/M
3300025083\|Ga0208791_1084083	Not Available	512	Open in IMG/M
3300025085\|Ga0208792_1013600	All Organisms → Viruses → Predicted Viral	1794	Open in IMG/M
3300025098\|Ga0208434_1043214	Not Available	1011	Open in IMG/M
3300025102\|Ga0208666_1128261	Not Available	592	Open in IMG/M
3300025120\|Ga0209535_1007321	Not Available	6546	Open in IMG/M
3300025120\|Ga0209535_1049176	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1812	Open in IMG/M
3300025276\|Ga0208814_1011717	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	3116	Open in IMG/M
3300025704\|Ga0209602_1243695	Not Available	504	Open in IMG/M
3300025769\|Ga0208767_1235304	Not Available	585	Open in IMG/M
3300025853\|Ga0208645_1165626	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	822	Open in IMG/M
3300025870\|Ga0209666_1085329	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1578	Open in IMG/M
3300028095\|Ga0247563_1043311	Not Available	920	Open in IMG/M
3300028280\|Ga0228646_1018122	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1749	Open in IMG/M
3300029319\|Ga0183748_1094687	Not Available	700	Open in IMG/M
3300031785\|Ga0310343_11298432	Not Available	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	38.66%
Oceanic	Environmental → Aquatic → Marine → Oceanic	29.41%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.13%
Strait	Environmental → Aquatic → Marine → Strait	8.40%
Coastal	Environmental → Aquatic → Marine → Coastal	6.72%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	38.66%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	21.01%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	11.76%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	8.40%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.40%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.68%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.68%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	37.82%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	11.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	11.76%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.40%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	7.56%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.72%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.52%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.52%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.68%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	1.68%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.68%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.68%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.84%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.84%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.84%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.84%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876004	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-0p1-ETM-15m	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001949	Marine microbial communities from Panama City, Panama - GS022	Environmental	Open in IMG/M
3300003346	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006345	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075m	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019267	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071402VT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020247	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962)	Environmental	Open in IMG/M
3300020264	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158)	Environmental	Open in IMG/M
3300020269	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)	Environmental	Open in IMG/M
3300020274	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)	Environmental	Open in IMG/M
3300020281	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116)	Environmental	Open in IMG/M
3300020282	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX556074-ERR599169)	Environmental	Open in IMG/M
3300020292	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555930-ERR599113)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020387	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556119-ERR599023)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020408	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300028095	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 11R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028280	Seawater microbial communities from Monterey Bay, California, United States - 58D	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
none_02351991	2236876004	Marine Estuarine	TYRQTEESAMLVGYEGYIAVAICLFCTWLGYTQGKRNGIESALDGMIKLKLLKVLDNGRIIAGTNLDTK
JGI24003J15210_1000373311	3300001460	Marine	MFTGYEGHIAVAICLFCTWLGYTQGKRNGIENALDGMIKLKLLKILNNGEIVAGSDLKKDPFK*
JGI24004J15324_100087376	3300001472	Marine	MFVGYEPYIATAICLFCTWLGYTHGKRNGIENALEGMISMKLLQVLPNGEIVAGTKLNINKDSG*
GOS2238_10185865	3300001949	Marine	MFAGYEAYIAVALCLLCTWLGYRQGRINGIESTLDSMIELKMLKVLNNGEIVAGS
JGI26081J50195_10337912	3300003346	Marine	MLAGYEPYVATAICLFCTWLGYTRGKRSGIESAVDGMISIGMLKVLDNGEIVAGAKLTKK
Ga0078893_116825545	3300005837	Marine Surface Water	MFVGYEGYVAVAICLFCTWLGYNHGRKNGIEIAVNGMVNLNLIKVLENGDIVAGSQLKQQKDNG*
Ga0078893_135611421	3300005837	Marine Surface Water	MLTGYESYIAVAICLFCTWLGYRQGKRNGIECTVDSMVELKLLKILNNGDIVAGSNLKENPYKTK*
Ga0099693_10023292	3300006345	Marine	MFVGYEGYIAIAICLFCTWLGYTQGRRNGIESAIEGMINLKLLRVLNNGEIVAGSNLKENPYKTK*
Ga0098038_11952202	3300006735	Marine	MFVGYEGNIAVTICLFCTWLGYTQGKRQGIEKALEGMITMKLLRVNLNGEIVAGSELKQDR*
Ga0098050_10157852	3300006925	Marine	MLAGYEPYVATAICLFCTWLGYTQGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0102889_10935342	3300008964	Estuarine	MLAGYEPYVATAICLFCTWLGYTRGKRSGIESAVDGMINIGMLKVLDNGEIVAGAKLTKK
Ga0114915_10103633	3300009428	Deep Ocean	MFVGYEPYISTAICLFCTWLGYTHGKRNGIEGALEGMINMKLLQVEPDTGEIVAGSNLKTNRK*
Ga0115560_13393071	3300009447	Pelagic Marine	TAICLFCTWLGYTKGKRSGIESALDGMISIGMLKVLDNGEIVAGAKLTKK*
Ga0115013_101529212	3300009550	Marine	MFVGYEGYIAVAICLFCTWLGYTQGKRNGIENALDGMIELKLLKVLNNGEIVAGSNLKTK
Ga0115013_103341571	3300009550	Marine	MFVGYEPYIATAICLFCTWLGYTHGKRNGIENALEGMITMKLLQVLPNGEIVAGSKLNTNKDSG*
Ga0098049_11204332	3300010149	Marine	MYINDRESAMFVGYESYIAVVICLFCTWLGYTQGKRQGIEKALEGMITMKLLRVKPNGEIVAGSELSQN*
Ga0160423_1000110046	3300012920	Surface Seawater	MFVGYEGYIAVAICLFCTWLGYTQGRRNGIESAIEGMINLKLLRVLKNGEIVAGSKLQHKK*
Ga0160423_1000308014	3300012920	Surface Seawater	MFVGYEGYIAVAICLFCTWLGYTQGRRNGIESAIEGMIHMKLLRVLDNGEIVAGSKLQQK
Ga0160423_105128881	3300012920	Surface Seawater	MFVGYEGYIAVAICLFCTWLGYTQGRRNGIECAVEGMIDLKLLKILDNGDIVAGSQLKQQQKDNG*
Ga0160423_105381322	3300012920	Surface Seawater	MFVGYEEYVAVIICLFCTWLGYNHGRRNGIEVAVNGMVNLNLIKVLENGDIVAGSQLKQQKDNG*
Ga0163110_104397303	3300012928	Surface Seawater	MFVGYEEYVAVAICLFCTWLGYNHGRRNGIEIAVNGMVNLNLIKVLENGDIVAGSQLKQQKDNG*
Ga0163110_106831761	3300012928	Surface Seawater	MFVGYESYIAVTICLFCTWLGYIHGKRQGIEKALEGMLKMKLLRVNLNGEIVAGSELKQDR*
Ga0163180_1000311420	3300012952	Seawater	MFAGYESYIAVALCLFCTWLGYRQGKRNGIESTLDSMIELKMLKVLNNGEIVAGSKLKENPFKK*
Ga0163180_102281953	3300012952	Seawater	MFVGYESYIAVAICLFCTWLGYTQGKRQGIEKALEGMLKMKLLRVNLNGEIVAGSELKQDR*
Ga0163180_117377992	3300012952	Seawater	MLIGYEGYIAVAICLFCTWLGYIQGRRTGIEVAVNGMINLRILEVLDNGELVAGSQLNVNAKNRKFEKN*
Ga0163180_119411651	3300012952	Seawater	MFVGYEGYIAVAICLFCTWLGYTQGRRNGIECAVESMINLKLLKVLNNGDIVAGSQLKQQQKDNG*
Ga0163179_100394962	3300012953	Seawater	MLIGYEGYIAVAICLFCTWLGYMHGRRTGIEVAVNGMINLRILEVLDNGELVAGSQLNVNAKNRKFEKN*
Ga0163179_100473198	3300012953	Seawater	EGYLAVAICLFCTWLGYKQGKRNGIECTVDSMVELKLLKILNNGEIVAGSKLKENPFK*
Ga0163179_101070402	3300012953	Seawater	MFIGYEGYIAVAICLFCTWLGYTQGKRNGIENALDGMIRLKLLKILNNGEIVAGSDLKQDPFK*
Ga0163179_102306272	3300012953	Seawater	MLTGYEGYLAVAICLFCTWLGYKQGKRNGIECTVDSMVELKLLKILNNGEIVAGSKLKENPFK*
Ga0163111_100342717	3300012954	Surface Seawater	MFVGYEPYIAVAICLFCTWLGYINGKRNGIENALEGMITMKLLQVLPNGEIVAGSKLNTKKDSG*
Ga0163111_100400498	3300012954	Surface Seawater	MFVGYEGYIAVAICLFCTWLGYTHGKRQGIEKALEGMLKMKLLRVNLNGEIVAGSELKQDT*
Ga0163111_103113552	3300012954	Surface Seawater	MFVGYEPYIATAICLFCTWLGYTHGKRNGIENALEGMITMKLLQVLPNGEIVAGSKLNTKKDSG*
Ga0181387_10666252	3300017709	Seawater	MFVGYEPYIATAICLICTWLGYTHGKRNGIENALEGMISMKLLQVEPNGEIVAGSNLKTK
Ga0181403_11341581	3300017710	Seawater	GYIAVAICLFCTWLGYTQGKRNGIENTLDGMVELKLLKVLNNGEIVAGSNLKTK
Ga0181428_10076813	3300017738	Seawater	MFVGYEGYIAVAICLFCTWLGYTQGKRNGIENTLDGMVELKLLKVLNNGEIVAGSN
Ga0181421_11404781	3300017741	Seawater	YIAVAICLFCTWLGYTQGKRNGIENTLDGMVELKLLKVLNNGEIVAGSNLKTK
Ga0181402_10519741	3300017743	Seawater	TEESAMLVGYEGYIAVAICLFCTWLGYTQGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0181397_10318004	3300017744	Seawater	ELAMFVGYEGYIAVAICLFCTWLGYTQGKRNGIENTLDGMVELKLLKVLNNGEIVAGSNLKTK
Ga0181427_10828342	3300017745	Seawater	MFVGYEPYIATAICLFCTWLGYTYGKRNGIENALEGMITMKLLQVLPNGEIVAGPKLNTN
Ga0181407_10496713	3300017753	Seawater	AMFVGYEGYIAVAICLFCTWLGYTQGKRNGIENTLDGMVELKLLKVLNNGEIVAGSNLKT
Ga0181386_11538342	3300017773	Seawater	MFVGYESYIAVVICLFCTWLGYTHGKRQGIEKALEGMITMKLLRVKPNGEIVAGSELNQN
Ga0181394_10466571	3300017776	Seawater	MLAGYEPYVATAICLFCTWLGYTKGKRSGIESALDGMINIGMLKVLDNGEIVAGAKLTKK
Ga0181565_100328672	3300017818	Salt Marsh	MFVGYEPYIAVAICLFCTWLGYTQGKRNGIESTLDGMIRLKLLKVLDNGEIVAGSDLKQK
Ga0181565_106716332	3300017818	Salt Marsh	MFAGYEGYIAVAICLFCTWLGYMQGKRSGIESAIEGMVALKLLKILPNGRIIAGPNLETK
Ga0181584_1001026012	3300017949	Salt Marsh	MFAGYEGYVAVAICLFCTWLGYMKGKRSGIENAIEGMVAMKLLKVLPDGRIVAGSNLEAK
Ga0181607_101840791	3300017950	Salt Marsh	INILYYTYRQTEESAMLVGYEGYIAVAICLFCTWLGYTQGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0181580_102294363	3300017956	Salt Marsh	SAMFVGYEPYIAVVICLFCTWLGYMQGKRNGIEKALDALISLRLLRVLDNGEIVAGSELQKK
Ga0181571_100448844	3300017957	Salt Marsh	MFAGYEGYIAVAICLFCTCLGYMQGKRSGIESAIEGMVALKLLKILPNGRIIAGPNLETK
Ga0181571_102497832	3300017957	Salt Marsh	MFVGYEPYIAVVICLFCTWLGYTQGKRNGIESTLDGMIRLKLLKVLDNGEIVAGSDLKQK
Ga0181571_105449952	3300017957	Salt Marsh	PYIAVVICLFCTWLGYMQGKRNGIEKALDALISLRLLRVLDNGEIVAGSELQKK
Ga0181601_101301532	3300018041	Salt Marsh	MLVGYEGYIAVAICLFCTWLGYTHGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0181567_100767912	3300018418	Salt Marsh	MFAGYEGYIAVAICLFCTWLGYMQGKRSGIESAIEGMVALKLLKILPNGRIIAGSNLETK
Ga0182069_12891462	3300019267	Salt Marsh	MFVGYEPYIAVVICLFCTWLGYMQGKRNGIEKALDALISLRLLRVLDNGEIVAGSELQKK
Ga0181562_1000007158	3300019459	Salt Marsh	MLVGYEGYIAVAICLFCTWLGYTQGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0211654_10326471	3300020247	Marine	VGYESYIAIIICLFCTWLGYTHGKRQGIEKALEGMITMKLLRVKPNGEIVAGSDLNQN
Ga0211654_10570072	3300020247	Marine	MFVGYEPYIATAICLFCTWLGYIHGKRNGIENALEGMITMKLLQVLPNGEIVAGP
Ga0211526_10014171	3300020264	Marine	MFVGYEEYVAVAICLFCTWLGYNYGRRNGIEIAVNGMVNLNLIKVLENGDIVAGSQLKQQKDNG
Ga0211484_10700652	3300020269	Marine	MFVGYEGYVAVAICLFCTWLGYNHGRKNGIEIAVNGMVNLNLIKVLENGDIVAGSQLKQQKDNG
Ga0211658_10479162	3300020274	Marine	MFVGYEPYIATAICLFCTWLGYTHGKRNGIENALEGMITMKLLQVLPNGEIVAG
Ga0211483_101028862	3300020281	Marine	MFVGYESYIAVAICLFCTWLGYTQGKRNGIEKALEGMIQMKLLRVNLNGEIVAGSELKQD
Ga0211483_102122551	3300020281	Marine	MFAGYEPYIAVALCLLCTWLGYRQGKMNGIESTLDSMIELKLLKVLNNGEIVAGSKLKQNPYSXKDIDKNFPIR
Ga0211667_10391812	3300020282	Marine	MFAGYEGHIAVAICLFCTWLGYRQGKMNGIASTLDSMIELKLLKILNNGEIVAGPKLKQNSD
Ga0211663_10637202	3300020292	Marine	MFVGYEGYIAVTICLFCTWLGYTQGKRQGIEKALEGMITMKLLRVNLNGEIVAGSEL
Ga0211504_10329142	3300020347	Marine	MLVGYEGYIAVAICLFCTWLGYTQGKRNGIERALDGMIKLKLLKVLDNGRIIAGTNLDTK
Ga0211647_100808551	3300020377	Marine	MFVGYEGYIAVAICLFCTWLGYTHGKRQGIEKALEGMLKMKLLRVNLNGEIVAGSELKQD
Ga0211652_100033687	3300020379	Marine	MFVGYESYIAIIICLFCTWLGYTHGKRQGIEKALEGMITMKLLRVKPNGEIVAGSDLNQN
Ga0211652_100086847	3300020379	Marine	MFVGYEPYIAVAICLFCTWLGYINGKRNGIENALEGMITMKLLQVLPNGEIVAGSKLNTKKDSG
Ga0211652_100191123	3300020379	Marine	MFVGYEPYIATAICLFCTWLGYIHGKRNGIENALEGMITMKLLQVLPNGEIVAGPKLNTNKDSG
Ga0211590_102166571	3300020387	Marine	MFVGYESYIAVAICLFCTWLGYTQGKRNGIEKALEGMIQMKLLRVNLNGEIVAGSE
Ga0211636_100218786	3300020400	Marine	MFAGYEPYIAVALCLLCTWLGYRQGKMNGIESTLDSMVELKLLKVLNNGEIVAGPKLKQNPYN
Ga0211651_101200402	3300020408	Marine	MFVGYEEYVAVIICLFCTWLGYNHGRRNGIEVAVNGMVNLNLIKVLENGDIVAGSQLKQQKDNG
Ga0211472_100292105	3300020409	Marine	MFAGYEPYIAVALCLLCTWLGYRQGKMNGIESTLDSMIELKLLKVLNNGEIVAGSKLKQNPYS
Ga0211516_1000432422	3300020413	Marine	MFVGYESYIAVAICLFCTWLGYTQGKRNGIEKALEGMINLKLLRVNLKGEIVAGTDLKQK
Ga0211512_100314523	3300020419	Marine	MFVGYESYIAVAICLFCTWLGYIQGKRNGIEKALEGMIKMKLLRVNLKGEIVAGSELNQN
Ga0211580_103200132	3300020420	Marine	MFAGYEPYIAVILCLFCTYLGYLQGRKNGIETAIDGLVQMNLLKILNNGEVVAGSDLKQNPYT
Ga0211554_101672312	3300020431	Marine	MFVGYESYIAVVICLFCTWLGYTQGKRQGIEKALEGMITMKLLRVKPNGEIVAGSELNQN
Ga0211708_100329162	3300020436	Marine	MFAGYEAYIAVALCLLCTWLGYRQGRINGIESTLDSMIELKMLKVLNNGEIVAGSKLKQNPYN
Ga0211708_100603393	3300020436	Marine	MFVGYEGYVAVAICLFCTWLAYNHGRRNGIEVAVNGMVNLNLIKVLDNGDIVAGSQLKQQKDNG
Ga0211708_101947522	3300020436	Marine	MLIGYEGYIAVAICLFCTWLGYIQGRRTGIEVAVNGMINLKILEVLDNGELVAGSKLNENTTNRKFEKN
Ga0211708_103904351	3300020436	Marine	MFVGYEGYIAVAICLFCTWLGYTQGRRNGIESAIEGMINLKLLRVLKNGEIVAGSKLEQK
Ga0211576_100081449	3300020438	Marine	MLIGYEGYIAVAICLFCTWLGYIQGRRTGIEVAVNGMINLKILEVLENGELVAGSKLNGNTTNRKFEKN
Ga0211576_100246451	3300020438	Marine	MFVGYEPYIATAICLFCTWLGYTYGKRNGIENALEGMITMKLLQVLPNGEIVAGPKLNTNKDSG
Ga0211576_104176652	3300020438	Marine	MFVGYESYIAVTICLFCTWLGYTHGKRQGIEKALEGMITMKLLRVKPNGEIVAGSELNQN
Ga0211559_102523722	3300020442	Marine	MFVGYEEYVAVAICLFCTWLGYNHGRRNGIEIAVNGMVNLNLIKVLENGDIVAGSQLKQQKDNG
Ga0211574_100279402	3300020446	Marine	MFVGYEGYIAVAICLFCTWLGYTQGKRQGIEKALEGMITMKLLRVNLNGEIVAGSELKQD
Ga0211638_100286382	3300020448	Marine	MFVGYESYIAVAICLFCTWLGYTQGKRNGIEKALEGMIKLKLLRVNLKGEIVAGSELNQN
Ga0211641_103158582	3300020450	Marine	MFVGYEGYIAVALCLFCTWLGYTQGRRNGIESAIEGMIHMKLLRVLDNGEIVAGSKLQQK
Ga0211473_1000118122	3300020451	Marine	MLIGYEGYIAVAICLFCTWLGYMHGRRTGIEVAVNGMINLRILEVLDNGELVAGSQLNVNAKNRKFDKN
Ga0211473_104527542	3300020451	Marine	LTGYESYIAVAICLFCTWLGYRQGKRNGIECTVDSMVELKLLKILNNGDIVAGSNLKENPYKTK
Ga0211545_1000045436	3300020452	Marine	MLIGYEGYIAVAICLFCTWLGYIQGRRTGIEVAVNGMINLRILEVLDNGELVAGSQLNVNAKNRKFEKN
Ga0211664_1000299815	3300020455	Marine	MFVGYEGYIAVTICLFCTWLGYTQGKRQGIEKALEGMITMKLLRVNLNGEIVAGSELKQD
Ga0211676_1000491912	3300020463	Marine	MFVGYESYIAVTICLFCTWLGYTHGKRQGIEKALEGMIIMKLLRVKPNGEIVAGSELNQN
Ga0211676_1001619011	3300020463	Marine	MFVGYEPYIATAICLFCTWLGYTHGKRSGIENALEGMITMKLLQVEPNGEIVAGCNLKTK
Ga0211676_100839026	3300020463	Marine	MFVGYESYIAVAICLFCTWLGYTHGKRQGIEKALEGMIIMKLLRVKPNGEIVAGSELNQN
Ga0211676_102964062	3300020463	Marine	MFAGYEGYIAVAICLFCTWLGYRQGKRSGIECTLDSMVELKLLKILNNGEIVAGPDLKENPYK
Ga0211577_100462895	3300020469	Marine	MYINDKESAMFVGYEPYIATAICLICTWLGYTHGKRNGIENALEGMISMKLLQVEPNGEIVAGSNLKTK
Ga0211577_101169314	3300020469	Marine	MFVGYEGYIAVAICLFCTWLGYTQGKRNGIENTLDGMVELKLLKVLNNGEIVAGSNLKTK
Ga0211547_103206311	3300020474	Marine	MLIGYEGYIAVAICLFCTWLGYIQGRRTGIEVAVNGMINLRILEVLDNGELVAGSQLNVNAKNRKFDKN
Ga0213860_100363382	3300021368	Seawater	MFAGYEGYIAVTITLLCTYLGYWHGKRTGIERALEGMVSLKLLRILDNGEIVAGSELKHK
Ga0222716_100594373	3300021959	Estuarine Water	MLVGYEGYIAVAICLFCTWLGYTQGKRNGIESALDGMIKLKLLKVLDNGRIIAGTNLDTK
Ga0196899_12015872	3300022187	Aqueous	MLVGYEGYIAVAICLFCTWLGYTQGKRNGIESALDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0255765_11830031	3300022921	Salt Marsh	HLSINILYYTYRQTEESAMLVGYEGYIAVAICLFCTWLGYTHGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0255776_101840963	3300023173	Salt Marsh	ESAMFVGYEPYIAVVICLFCTWLGYMQGKRNGIEKALDALISLRLLRVLDNGEIVAGSELQKK
Ga0208791_10840831	3300025083	Marine	MLAGYEPYVATAICLFCTWLGFTKGKRSGIESALDGMISIGMLKVLDNGEIVAGSKLTKK
Ga0208792_10136001	3300025085	Marine	AICLFCTWLGYTQGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0208434_10432141	3300025098	Marine	MYINDRESAMFVGYESYIAVVICLFCTWLGYTQGKRQGIEKALEGMITMKLLRVKPNGEIVAGSELSQN
Ga0208666_11282611	3300025102	Marine	YEGYIAVTICLFCTWLGYTQGKRQGIEKALEGMITMKLLRVNLNGEIVAGSELKQDR
Ga0209535_10073219	3300025120	Marine	MFTGYEGHIAVAICLFCTWLGYTQGKRNGIENALDGMIKLKLLKILNNGEIVAGSDLKKDPFK
Ga0209535_10491762	3300025120	Marine	MFVGYEPYIATAICLFCTWLGYTHGKRNGIENALEGMISMKLLQVLPNGEIVAGTKLNINKDSG
Ga0208814_10117174	3300025276	Deep Ocean	MFVGYEPYISTAICLFCTWLGYTHGKRNGIEGALEGMINMKLLQVEPDTGEIVAGSNLKTNRK
Ga0209602_12436952	3300025704	Pelagic Marine	MLAGYEPYVATAICLFCTWLGYTKGKRSGIESALDGMISIGMLKVLDNGEIVAGAKLTKK
Ga0208767_12353041	3300025769	Aqueous	KESAMLVGYEGYIAVAICLFCTWLGYTQGKRNGIESALDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0208645_11656262	3300025853	Aqueous	YTYRQTKESAMLVGYEGYIAVAICLFCTWLGYTQGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0209666_10853295	3300025870	Marine	QTEESAMLVGYEGYIAVAICLFCTWLGYTQGKRNGIESALDGMIKLKLLKVLDNGRIIAGTNLDTK
Ga0247563_10433111	3300028095	Seawater	MLVCYEVYIAVAICLFCTWLGYTQGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0228646_10181221	3300028280	Seawater	TYRQTEESAMLVGYEGYIAVAICLFCTWLGYTQGKRNGIESTLDGMIKLKLLKVLDNGRIVAGTNLDTK
Ga0183748_10946872	3300029319	Marine	MFVGYEGYIAVIICLFCTWLGYIQGKRNGIETAIEGMINLKLLRVLKNGEIVAGSNLQQK
Ga0310343_112984321	3300031785	Seawater	MFSGYESYIAVALCLLCTWLGYRQGKLNGIESTIDSMIELKMLKVLNNGEIVAGSKLKQNPYN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074965

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences