Metagenome / Metatranscriptome Family F073995

Basic Information
Family ID	F073995
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	61 residues
Representative Sequence	MVKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRVG
Number of Associated Samples	98
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.87 %
% of genes near scaffold ends (potentially truncated)	18.33 %
% of genes from short scaffolds (< 2000 bps)	84.17 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.500 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.64% β-sheet: 0.00% Coil/Unstructured: 36.36%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00296	Bac_luciferase	26.67
PF00583	Acetyltransf_1	2.50
PF13607	Succ_CoA_lig	2.50
PF12840	HTH_20	1.67
PF11706	zf-CGNR	1.67
PF13473	Cupredoxin_1	0.83
PF01476	LysM	0.83
PF00857	Isochorismatase	0.83
PF07883	Cupin_2	0.83
PF03984	DUF346	0.83
PF01872	RibD_C	0.83
PF13683	rve_3	0.83
PF13181	TPR_8	0.83
PF03741	TerC	0.83
PF01594	AI-2E_transport	0.83
PF00248	Aldo_ket_red	0.83
PF00355	Rieske	0.83
PF15428	Imm26	0.83
PF08327	AHSA1	0.83
PF10851	DUF2652	0.83
PF01435	Peptidase_M48	0.83
PF00041	fn3	0.83
PF01243	Putative_PNPOx	0.83
PF04542	Sigma70_r2	0.83
PF01761	DHQ_synthase	0.83
PF10633	NPCBM_assoc	0.83
PF08264	Anticodon_1	0.83
PF00994	MoCF_biosynth	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	26.67
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.83
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.83
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	15.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
Atribacterota	phylum	All Organisms → cellular organisms → Bacteria → Atribacterota	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.00 %
unclassified Atribacterota	no rank	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	5.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.67 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.83 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.83 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.83 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	0.83 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Planctomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomicrobium	0.83 %
unclassified Hydrogenophaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga	0.83 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Hydrogenophaga sp. A37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. A37	0.83 %
Planctomicrobium piriforme	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomicrobium → Planctomicrobium piriforme	0.83 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.83 %
Frankia sp. CgIM4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CgIM4	0.83 %
Hydrogenophaga sp. A37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. A37	0.83 %
Planctomicrobium piriforme	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomicrobium → Planctomicrobium piriforme	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119284610	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300003312\|P12013IDBA_1018170	All Organisms → cellular organisms → Bacteria	2782	Open in IMG/M
3300003465\|P52013CM_1065904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	797	Open in IMG/M
3300004015\|Ga0055462_10235226	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300004070\|Ga0055488_10191992	Not Available	550	Open in IMG/M
3300004480\|Ga0062592_100817876	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300004481\|Ga0069718_15362554	Not Available	950	Open in IMG/M
3300004643\|Ga0062591_100662901	Not Available	936	Open in IMG/M
3300004778\|Ga0062383_10089944	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300004778\|Ga0062383_10184853	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005328\|Ga0070676_10951046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	642	Open in IMG/M
3300005338\|Ga0068868_101533412	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005355\|Ga0070671_101936050	Not Available	524	Open in IMG/M
3300005457\|Ga0070662_100959697	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005466\|Ga0070685_10110537	Not Available	1692	Open in IMG/M
3300005830\|Ga0074473_10442649	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	876	Open in IMG/M
3300005833\|Ga0074472_10127499	Not Available	866	Open in IMG/M
3300005833\|Ga0074472_10469462	All Organisms → cellular organisms → Bacteria	3024	Open in IMG/M
3300005833\|Ga0074472_11280815	All Organisms → cellular organisms → Bacteria	11772	Open in IMG/M
3300005840\|Ga0068870_11210675	Not Available	547	Open in IMG/M
3300006169\|Ga0082029_1558903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2245	Open in IMG/M
3300006574\|Ga0074056_11423683	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300006792\|Ga0075530_1259197	All Organisms → cellular organisms → Bacteria → Terrabacteria group	536	Open in IMG/M
3300006844\|Ga0075428_100664593	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300006894\|Ga0079215_10998855	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300009094\|Ga0111539_11660328	Not Available	741	Open in IMG/M
3300009094\|Ga0111539_11717058	Not Available	728	Open in IMG/M
3300009156\|Ga0111538_11799096	Not Available	771	Open in IMG/M
3300009553\|Ga0105249_10939568	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300010397\|Ga0134124_12149899	Not Available	597	Open in IMG/M
3300010408\|Ga0137020_102944	Not Available	741	Open in IMG/M
3300011119\|Ga0105246_11279082	Not Available	679	Open in IMG/M
3300012201\|Ga0137365_10327043	Not Available	1134	Open in IMG/M
3300012204\|Ga0137374_10599945	Not Available	840	Open in IMG/M
3300012985\|Ga0164308_12084790	Not Available	528	Open in IMG/M
3300012986\|Ga0164304_10468844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	912	Open in IMG/M
3300013296\|Ga0157374_12590446	Not Available	535	Open in IMG/M
3300013297\|Ga0157378_12606872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	558	Open in IMG/M
3300013297\|Ga0157378_13270123	Not Available	503	Open in IMG/M
3300013308\|Ga0157375_11764735	Not Available	733	Open in IMG/M
3300014304\|Ga0075340_1039103	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300014326\|Ga0157380_11759342	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300014745\|Ga0157377_11045143	Not Available	622	Open in IMG/M
3300015191\|Ga0167659_1079897	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300015360\|Ga0163144_11842671	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300015371\|Ga0132258_10623103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2711	Open in IMG/M
3300015371\|Ga0132258_11961110	Not Available	1474	Open in IMG/M
3300017787\|Ga0183260_10571777	Not Available	728	Open in IMG/M
3300017789\|Ga0136617_10466329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300017792\|Ga0163161_11002318	Not Available	713	Open in IMG/M
3300018028\|Ga0184608_10007811	All Organisms → cellular organisms → Bacteria	3548	Open in IMG/M
3300018052\|Ga0184638_1298886	Not Available	545	Open in IMG/M
3300018063\|Ga0184637_10160236	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300018429\|Ga0190272_10574525	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300018429\|Ga0190272_10706613	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300018432\|Ga0190275_10782087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1017	Open in IMG/M
3300018466\|Ga0190268_11857045	Not Available	546	Open in IMG/M
3300018469\|Ga0190270_10247027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1549	Open in IMG/M
3300018469\|Ga0190270_10364418	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300018469\|Ga0190270_12010692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300018469\|Ga0190270_13202039	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300018481\|Ga0190271_10131704	Not Available	2376	Open in IMG/M
3300018481\|Ga0190271_10434338	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300018481\|Ga0190271_13315750	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300020059\|Ga0193745_1016642	Not Available	1599	Open in IMG/M
3300020186\|Ga0163153_10483709	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300021080\|Ga0210382_10000572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	13074	Open in IMG/M
3300021332\|Ga0210339_1436771	Not Available	572	Open in IMG/M
3300022222\|Ga0226658_10549685	Not Available	510	Open in IMG/M
3300022385\|Ga0210376_1067464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300024181\|Ga0247693_1056475	Not Available	574	Open in IMG/M
3300025160\|Ga0209109_10026613	All Organisms → cellular organisms → Bacteria	3120	Open in IMG/M
3300025165\|Ga0209108_10245606	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300025313\|Ga0209431_10490088	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300025908\|Ga0207643_10197295	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomicrobium → Planctomicrobium piriforme	1224	Open in IMG/M
3300025912\|Ga0207707_10519724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CgIM4	1014	Open in IMG/M
3300025947\|Ga0210067_1006653	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300026023\|Ga0207677_10720475	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300026023\|Ga0207677_11354771	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300026116\|Ga0207674_11619573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. A37	616	Open in IMG/M
3300026116\|Ga0207674_11951153	Not Available	553	Open in IMG/M
3300027897\|Ga0209254_10474561	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300028722\|Ga0307319_10064345	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300028755\|Ga0307316_10271896	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300028802\|Ga0307503_10186397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300028803\|Ga0307281_10378931	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300030006\|Ga0299907_11288911	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300030606\|Ga0299906_10551298	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300030606\|Ga0299906_11110639	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300030619\|Ga0268386_10014657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6103	Open in IMG/M
3300030620\|Ga0302046_10115062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2197	Open in IMG/M
3300031170\|Ga0307498_10342406	All Organisms → cellular organisms → Bacteria → Terrabacteria group	572	Open in IMG/M
3300031229\|Ga0299913_10012439	All Organisms → cellular organisms → Bacteria	7626	Open in IMG/M
3300031229\|Ga0299913_10049742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4000	Open in IMG/M
3300031366\|Ga0307506_10207645	Not Available	723	Open in IMG/M
3300031455\|Ga0307505_10552285	Not Available	557	Open in IMG/M
3300031699\|Ga0315535_1313348	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031965\|Ga0326597_10352824	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300031965\|Ga0326597_10473016	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300031965\|Ga0326597_11789459	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300032002\|Ga0307416_103521077	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032164\|Ga0315283_10442902	Not Available	1412	Open in IMG/M
3300032164\|Ga0315283_12444215	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032173\|Ga0315268_10672048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1031	Open in IMG/M
3300032173\|Ga0315268_11907538	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300032173\|Ga0315268_12478413	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300032256\|Ga0315271_11412993	Not Available	600	Open in IMG/M
3300032397\|Ga0315287_12588504	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300033416\|Ga0316622_102200179	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300033521\|Ga0316616_100023938	All Organisms → cellular organisms → Bacteria	4156	Open in IMG/M
3300034155\|Ga0370498_012303	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300034194\|Ga0370499_0031438	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300034195\|Ga0370501_0345615	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300034661\|Ga0314782_022296	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300034690\|Ga0364923_0036593	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.33%
Host-Associated	Host-Associated	21.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.67%
Aquatic	Environmental → Aquatic	26.67%
Plants	Host-Associated → Plants	21.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.83%
Freshwater	Environmental → Aquatic → Freshwater	15.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Sediment	Environmental → Aquatic → Sediment	5.83%
Marine	Environmental → Aquatic → Marine	5.00%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.83%
Lake	Environmental → Aquatic → Freshwater → Lake	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.00%
Loam	Environmental → Terrestrial → Soil → Loam	3.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.50%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.67%
Ice	Environmental → Aquatic → Freshwater → Ice	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.67%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.67%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.50%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.33%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	2.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.50%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.67%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.67%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.83%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	0.83%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003312	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P1 sample	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004015	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006792	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010408	Microbial communities from soil contaminated with neutral mine drainage from mine ?rea in Canaa dos Carajas, Brazil - End of the channel, sample P5-2012	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015191	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-10 : a,b,c samples pooled, hydrological sediment from glacier outflow)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022222	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)	Environmental	Open in IMG/M
3300022385	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S771 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025947	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031699	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1192846102	3300002568	Soil	MLIVARRLGIAFGSFVIAWLAVSLVAGWLFGSGNVLVWVLALLVGAGVREILRRDARTS*
P12013IDBA_10181704	3300003312	Ore Pile And Mine Drainage Contaminated Soil	MFKIARRVGIALGSFVVAWLAVSLVAGWLFGSGNILVWVIAAVVGGAVYLEILRRDRRAG
P52013CM_10659041	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MFRIARRVGIALGSFVIAWLAVSLVARWLFGSGNILVWVIAAVVGAGVYLDILRRDRRIR
Ga0055462_102352261	3300004015	Natural And Restored Wetlands	MFKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDIMRRDRQGRAETDRP*
Ga0055488_101919921	3300004070	Natural And Restored Wetlands	MVRVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDI
Ga0062592_1008178762	3300004480	Soil	MVKVARRVGIAFGSFVIAWFAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDILRRDRRVE
Ga0069718_153625542	3300004481	Sediment	MVRVARRLGVAFGAFVVAWLAVSLVAGWLVGPAAPGRILVWAIAAIVRAGVYLDILQRGCGVA*
Ga0062591_1006629011	3300004643	Soil	MVKVARRVGIAFGSFVIAWLAVSFVAGWLFGSGNILVWVFAAVVGAGVYLDMLRRDGRFG
Ga0062383_100899443	3300004778	Wetland Sediment	MFKIARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRVA
Ga0062383_101848532	3300004778	Wetland Sediment	MPKAARRVGIALGSFVIAWLAVSLVAGWLFGSGTILVWVIAAVVGAGVYLDILRRDRRDT
Ga0070676_109510461	3300005328	Miscanthus Rhizosphere	MMFRFARRVGIAFGSFVIALLAVSLVAGWLFGSGNFLVWVIAAVVGAAVYRDILRRE
Ga0068868_1015334122	3300005338	Miscanthus Rhizosphere	SFVIAWLAVSLVAGWLFGSGNFLVWVIAAVVGAAVYRDILRRERRGTWRGSMQWERP*
Ga0070671_1019360501	3300005355	Switchgrass Rhizosphere	MFKIARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVFAAVVDAAIYLDIMRRDRRVR
Ga0070662_1009596972	3300005457	Corn Rhizosphere	MMFRFARRVGIAFGSFVIAWLAVSLVAGWLFGSGNFLVWVIAAVVGAAVYRDILRRERRGT*
Ga0070685_101105371	3300005466	Switchgrass Rhizosphere	MFKVARRVGIAFGSFVIAWLAVSLVAGWVFGSGNILVWVFAAVVGAGVYLDILRRDRRAA
Ga0074473_104426491	3300005830	Sediment (Intertidal)	MIKFARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDIMRRDRRVV
Ga0074472_101274992	3300005833	Sediment (Intertidal)	MVMFARRLGIAFGAFVIAWLAVSLVAGWLFGSGNILVWVISAVVGAGVYLDILRRDRRDG
Ga0074472_104694624	3300005833	Sediment (Intertidal)	MIKFARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDILRRDRRVA
Ga0074472_112808152	3300005833	Sediment (Intertidal)	MPKAARRVGIALGSFVIAWLAVSLVAGWLFGSGNILTWVIAAVVGAGVYLDILRRDRRDG
Ga0068870_112106752	3300005840	Miscanthus Rhizosphere	MAPWSKSMFMVVRRVGIAIGSFVIAWLAVSFLAGWLFGSGNVLVWVLAAGVGAVVYLELLRRDEGSQGT*
Ga0082029_15589033	3300006169	Termite Nest	MLELTRRVGIAFASFALVWLAVSLAARWLFGSGNVLVWVVAAIVGVIVYLAVAQRERGAHDTR*
Ga0074056_114236831	3300006574	Soil	FGSFVIAWFAILFVAERLFGSGNVLVWVFAAVVGAGAYLGMLRRDRRVG*
Ga0075530_12591972	3300006792	Arctic Peat Soil	MPKLARRVGIAFGSFAVAWLAVSLGAGWLFGSGNILVWVIAAVVGVTVYLVILRRD
Ga0075428_1006645932	3300006844	Populus Rhizosphere	MSDPVLKVARRVGIAIGSFVIAWFAVSFVAKWLFGSGNVLVWVLAAVVGAGVYLDILRRDRHAG*
Ga0079215_109988552	3300006894	Agricultural Soil	MVNVARRVGIVFGSFVIAWLAVSLVAGWLFGSGNILVWVFAAVVAAGVYLEILRRDRRDG
Ga0111539_116603281	3300009094	Populus Rhizosphere	MVRVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNFLTWVIAAVVGAGVYLDILRRDRRTG
Ga0111539_117170582	3300009094	Populus Rhizosphere	MLKTARRVGIALGSFVIAWFAIVNVAVWLFGSANFLAYVLAAVVAVGVYLALLLRDRHVA
Ga0111538_117990961	3300009156	Populus Rhizosphere	MFKTARRVGIALGSFVIAWFAIVNVAVWLFGSANFLAYVFAAVVAVVVYLALLLRDRHVA
Ga0105249_109395681	3300009553	Switchgrass Rhizosphere	MFKVARRVGIAFGSFVIAWLAVSLVAGWVFGSGNILVWVFASVVGAGVYLDILRRDRRA
Ga0134124_121498992	3300010397	Terrestrial Soil	MLMVARRIGIAFGAFVVAWLAASLAAKWLYGSGNVLVWIIAALVGAVVYLEILRRDRRAG
Ga0137020_1029442	3300010408	Soil	VINAARRIGIAFGSFVIAWLAVSLVARWLFGSGNILVWVIAAVVGAGVYLDILRRDRLDR
Ga0105246_112790821	3300011119	Miscanthus Rhizosphere	MFKVARRVGIAFGSFVIAWLAVSLVAGWVFGSGNILVWVFAAVVGAGVYLDILRRDSRAA
Ga0137365_103270432	3300012201	Vadose Zone Soil	MQTLRRLGIALGSFVIAWLAVSLVAGLLFGSSASGNYLVWVTAIVVGALVYLDILRRDRRSV*
Ga0137374_105999452	3300012204	Vadose Zone Soil	MQTLRRLGIALGSLVIAWLAVSLVAGLLFGSSASGNYLVWVTAIVVGALVYLDILRRDRRSV*
Ga0164308_120847901	3300012985	Soil	MLRFARRVGIAFGSFVIAWLAVSLVAGWLFGSANFLVWVIAAVFGAGVYLDILRRDRRVT
Ga0164304_104688442	3300012986	Soil	MLRFARRVGIAFGSFVIAWLAVSLVAGWLFGSANFLVWVIAAVVGAGVYLDILRRDRRVT
Ga0157374_125904462	3300013296	Miscanthus Rhizosphere	MFKIARRVGIAFGSFVIAWLAVSLVAGWLFGFGNILVWVFAAVVGAAVYLEIMRRDRRVR
Ga0157378_126068721	3300013297	Miscanthus Rhizosphere	MFRFARRVGIAFGSFVIAWLAVSLVAGWLFGSGNFLVWVIAAVVGAAVYRDILRRER
Ga0157378_132701231	3300013297	Miscanthus Rhizosphere	MFKIARRVGIAFGSFVIAWLAVSLVAGWLFGFGNILVWVFAAVVGFVAYLYLLWRDRRVG
Ga0157375_117647351	3300013308	Miscanthus Rhizosphere	MLKVARRVWIAFGSFVIAWLAVSLVAGWVFGSGNILVWVFAAVVGAGVYLDILRRDRRAA
Ga0075340_10391032	3300014304	Natural And Restored Wetlands	MVRVARRVRIAFGSFVIAWLAVALVANWLFGSGNFLVWVFAAVVGAGVYVVLLWRDRRDG
Ga0157380_117593422	3300014326	Switchgrass Rhizosphere	MFKIARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDILRRDRRVE
Ga0157377_110451431	3300014745	Miscanthus Rhizosphere	MFKVARRVGIAFGSFVIAWLAVSRVAGWVFGSGNILVWVFAAVVGAGVYLDILRRDRRAA
Ga0167659_10798971	3300015191	Glacier Forefield Soil	LFKIARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVFAAVVGAGVYLDILRRDRRVG
Ga0163144_118426711	3300015360	Freshwater Microbial Mat	MVKVARRVGIAFGSFVLAWLAASLVAGWLFGSGNILVWVFAAVVGAGVYLGILRRDRRVG
Ga0132258_106231032	3300015371	Arabidopsis Rhizosphere	MVKVARRVGIAFGSFVIAWLAVSLVAGWIFGSANFLVWVIAAIVGAAVYLDILRRDRRNG
Ga0132258_119611102	3300015371	Arabidopsis Rhizosphere	MDETTGAMVRDARRLGIALVSFVVAWFAASFVGEWIFGSSNVLAWVLAAVVGAGVYLSLLRRDRRVG*
Ga0183260_105717771	3300017787	Polar Desert Sand	MPTVARRVGIAVGSFILAWLAATFVARWLFGSGNILVWVIAAVVGISAYLALQWREQRVGSAASR
Ga0136617_104663292	3300017789	Polar Desert Sand	MVKVARRLGITFGSFVIAWVALFLLGRWVFGSGNILIWVFAAVVAAVVYLEILRRDRRVG
Ga0163161_110023182	3300017792	Switchgrass Rhizosphere	MFKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNFLVWVIAAVVGAAVYRDILRRERRGT
Ga0184608_100078115	3300018028	Groundwater Sediment	MVKVARRVGIAFGSFVIAWLAVSLVAGWLFGSANFLVWVIAAVVGAGVYLDILRRDRRDG
Ga0184638_12988861	3300018052	Groundwater Sediment	MAKLARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVFAAVVAAGVYLAILRRDRRVG
Ga0184637_101602362	3300018063	Groundwater Sediment	MAKIARRVGIAFGAFVIAWLAASLVAGWLFGSGNILVWVFAAVVGAGVYLEILRRDRRVG
Ga0190272_105745252	3300018429	Soil	VTDMGLAKVARRVGIAFGSFVIAWFAAALVAGWLFGSGNFLVWVIAAAIGAAVYLDILRRDRRVG
Ga0190272_107066131	3300018429	Soil	MAKVARRVGIAFGSFVIAWFAVALVARWLFGSGNFLVWVIAAVIGAAVYLDILRRDRASASASQQKE
Ga0190275_107820872	3300018432	Soil	MLKIARRVGIAFGSFVIAWLAVSLVAVWLFGSANFLVWVIAAIVGAAVYLDIMRRERHGDERPSEGAETS
Ga0190268_118570452	3300018466	Soil	VTDIRLAKVARRVGIAFGSFVIAWFAAALVAGWLFGSGNFLVWVIAAVVGAAVYLDILRRDRRVG
Ga0190270_102470272	3300018469	Soil	VKLARRLGMTFGAFVIAWIALFVLAQWLFGSGNILIWVFAAAFGGLVYVEILRREGRVG
Ga0190270_103644182	3300018469	Soil	LNVKVARRLGITFGAFVIAWIALFVLAQWLFGSGNILIWVFAAVFGALVYLAILRREGRV
Ga0190270_120106922	3300018469	Soil	MVNVARRVGIVFGSFVIACLAVSLVAGWLFGSGNSLVWVFAAVVYLEILRRDR
Ga0190270_132020391	3300018469	Soil	MAKVARRVGIAFGSFVIAWLTAKLAGEWLFGSANFLVWVIAAIVGAGVYLELLRRDRAVS
Ga0190271_101317042	3300018481	Soil	MFIIARRVGIAFGAFVIAWIAATLAGVWLFGSANFLSYVIAALVAIAVYLEIMRRDRREGSG
Ga0190271_104343383	3300018481	Soil	MVLVARRVGITLGSFVIAWLAVSLVAGWLFGSGNILVWVFAAVVAAGVYLEILRRDRRDG
Ga0190271_133157501	3300018481	Soil	VGIAFGSFVIAWLAVSLVAGWIFGSGNILVWVIAAVVGAGVYVAILWRDRRVG
Ga0193745_10166422	3300020059	Soil	MAKLARRIGIAFGAFVIVWLAVALVARWIFGSGNILVWGFAAVVGASVYLEILRRDRRVG
Ga0163153_104837092	3300020186	Freshwater Microbial Mat	MLRSKLRELLSLGVGSLVNVARRVGIALGSFVAAWLAVSLVAGWLFGSGNILVWVIAAAVGAGVYLDVLRRDRRVD
Ga0210382_1000057211	3300021080	Groundwater Sediment	LFKIARRVGIALGSFVIAWLAVSLVAGWLFGSANFLVWVFAAVVGAGVYLDILRRDRRVD
Ga0210339_14367713	3300021332	Estuarine	VGIAFGSFVIAWLLLTVVARWLFGSGNVLVWVLAGIISAGVYVAILWRDRH
Ga0226658_105496851	3300022222	Freshwater Microbial Mat	LVNVARRVGIALGSFVAAWLAVSLVAGWLFGSGNILVWVIAAAVGAGVYLDVLRRDRRVD
Ga0210376_10674643	3300022385	Estuarine	FGSFVIAWLLLTVVARWLFGSGNVLVWVLAGIISAGVYVAILWRDRH
Ga0247693_10564752	3300024181	Soil	LAVGQLMLTVARRVGIALGSFVIAWLAISLVAGWLFGSGNVLVWVLAALVGGGVYLDILRRDQRAG
Ga0209109_100266135	3300025160	Soil	MLKIARRVGIAFGSFVIAWLAVSLVAGRLFGSGNILVWVIAAVVGAGVYLDILRRDRRVG
Ga0209108_102456062	3300025165	Soil	MLKIARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRVG
Ga0209431_104900882	3300025313	Soil	MFKIARRAGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVFAAVVGAGVYLVMLRRDRRVG
Ga0207643_101972953	3300025908	Miscanthus Rhizosphere	MAPWSKSMFMVVRRVGIAIGSFVIAWLAVSFLAGWLFGSGNVLVWVLAAGVGAVVYLELLRRDEGSQGT
Ga0207707_105197242	3300025912	Corn Rhizosphere	MPKVARRVGIAFGSFALAWLAASLVAGWLFGSGNILVWVLAAFVGAIVYLVILRGDQRGG
Ga0210067_10066531	3300025947	Natural And Restored Wetlands	MVRVARRVGIAFGSFVIAWLAVALVANWLFGSGNFLVWVFAAVVGAVVYVVLLWRNRRDG
Ga0207677_107204752	3300026023	Miscanthus Rhizosphere	VFKIARRVGIAFGSFVIAWLAVSLVAGWLFGFGNILVWVFAAVVGAAVYLEIMRRDRRVR
Ga0207677_113547712	3300026023	Miscanthus Rhizosphere	FARRVGIAFGSFVIAWLAVSLVAGWLFGSGNFLVWVIAAVVGAAVYRDILRRERRGTWRGSMQWERP
Ga0207674_116195732	3300026116	Corn Rhizosphere	LFKTARRVGIALGSFVIAWFAIVNVAVWLFGSANFLAYALAAVVGAGVYLDLLRR
Ga0207674_119511532	3300026116	Corn Rhizosphere	MSKTARRVAIAVGSFVIAWLAVDLVAKLLFGSNNILGWVIAAVVGAAVYLEMTRRDRRVS
Ga0209254_104745612	3300027897	Freshwater Lake Sediment	MIKFARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDIMRRDRRVA
Ga0307291_10743091	3300028707	Soil	FAQKEDPRDQSCSGGRLMVKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNFLVWVIAAVVGAGVYLDILRRDRRDG
Ga0307319_100643451	3300028722	Soil	GIAFGSFVIAWLAVSLVAGWLFGSANFLVWVIAAVVGAGVYLDILRRDRRDG
Ga0307316_102718961	3300028755	Soil	MFKIVRRVGIALGSFVIAWFATSLVAGWLFGSANFLVWVIAAVVGAGVYLDILRRDRRVG
Ga0307503_101863972	3300028802	Soil	MAKVARRVGIAFGSFVIAWVAAKLVGEWLFGSANFIVWVIAAIVGAGVYFELMRRDRRVG
Ga0307281_103789312	3300028803	Soil	GRLMVKIARRVGIAFGSFVIAWFAVSLIARWLFGSGNFLVWVFAAVVGAGVYLYILRRDRRVG
Ga0307300_101152252	3300028880	Soil	PPTPPFAQKEDPRDQSCSGGRLMVKVARRVGIAFGSFVIAWLAVSLVAGWLFGSANFLVWVIAAVVGAGVYLDILRRDRRDG
Ga0299907_112889111	3300030006	Soil	MTEDVMLARRVGIAFGSFAIAWLAVSLVAGWLFGSGNILVWAFAAVAGAIAYLAILRRDRRVG
Ga0299906_105512982	3300030606	Soil	MAKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDIMRRDRRVA
Ga0299906_111106391	3300030606	Soil	PTGGRLMVKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRVG
Ga0268386_100146573	3300030619	Soil	MAMVARRVAIAFGAFVVAWLAAALTAIWLFGSGNILVWVIAAVVGVLVYLAILWRDRRVG
Ga0268386_100421407	3300030619	Soil	PHKCCGGSSTKAVVGGRFMAKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLYILRRDRRVG
Ga0302046_101150623	3300030620	Soil	MVKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRVG
Ga0307498_103424061	3300031170	Soil	MARIARRIGVAFGSFVIAWLAVSLVAGWLFGSANVLVWVIAAVVGAGVYLDILRRDRRDG
Ga0299913_100124394	3300031229	Soil	MTRIVRRLGIAVGSFVIAWLVVALLAIWLFGSGNFLVWVLAALVGATVYLVLLRRDGRGG
Ga0299913_100497422	3300031229	Soil	MTNVARYVGITFGSFVVAWLAATLVARWLFGSGNVLVWVIAAFVAAVVFLAILRRDQRVA
Ga0307506_102076451	3300031366	Soil	SMVEMARRVATALGAFVIAWLVVTLVARLLFGSANFLSYVIAAVVGIGVYVVILRRDRPA
Ga0307505_105522851	3300031455	Soil	MFKVARRVGIAFGSFVIAWLAISLVAGWLFGSGNIIVWVVAAVVGAGVYLDIRRRDQRLG
Ga0315535_13133481	3300031699	Salt Marsh Sediment	MVKVARRLGIALGSFVIAWLAVSLVAGWLFGSGNILVWVFAAVVGAGVYLGILRRDRRVA
Ga0315290_106384952	3300031834	Sediment	MQTLRSKFGSCCSGGRFMVKVARRLGIALGSFVIAWLAVSLVARWLFGSGNILVWVIAAVVGAGVYLDILRRDRRVG
Ga0326597_103528242	3300031965	Soil	MVTIVRRVGLAVGAFVIAWLAVSLVAEWLFGSGNILVWVFAAVVGAGVYLDFLRRDRRVG
Ga0326597_104730163	3300031965	Soil	MFKIARRAGIAFGSFVIAWLAVSLVAGWLFGSGNILIWVFAAVVGAGVYLVILRRDRRVG
Ga0326597_117894592	3300031965	Soil	MIKFARRIGIAFGSFVIAWLAVSLLAGWLFGSGNILVWVIAAIVGAGVYLDILRRDRRVA
Ga0307416_1035210772	3300032002	Rhizosphere	MLKVLRRVGIAFGSFVIAWLATSLVAGWLFGSGNILVWVIAALIGAAVYLDIVRRDRRVR
Ga0315292_101716243	3300032143	Sediment	MQTLRSKFGSCCSGGRFMVKVARRLGIALGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRVG
Ga0315283_104429023	3300032164	Sediment	MVKAARRVGIAVGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRVG
Ga0315283_124442152	3300032164	Sediment	ECCSGGRFMVKAARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRDG
Ga0315268_106720482	3300032173	Sediment	MVKVARRLGIALGSFVIAWLAVSLVAGWLFGSGNILVWVIAAAVGAGVYLDILRRDRRVP
Ga0315268_119075382	3300032173	Sediment	CGGRSMVKAVRRVGIAFGSFVIAWLAVSLVARWLFGSGNILVWVIAAVVGAGVYLDILRRDRRDD
Ga0315268_124784132	3300032173	Sediment	MAKVARRLGIAFGSFVIAWLAVSLVARLLFGSGNILVWVFAAVVGAGVYLVILRRDRRVG
Ga0315271_114129931	3300032256	Sediment	MVKVARRLGIALGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGASVYLDIVRRVRRVA
Ga0315287_125885041	3300032397	Sediment	MVKAARRVGIAVGSFVIAWLAVSLVAGWLFGSGNILVWVIAAVVGAGVYLDILRRDRRDG
Ga0316622_1022001793	3300033416	Soil	VGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGVGVYLDILRRERRAT
Ga0316616_1000239384	3300033521	Soil	MVKVVRRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGVGVYLDILRRERRAT
Ga0370498_012303_748_939	3300034155	Untreated Peat Soil	VIPVIRRLGIALGSFIAAWLAVSLVAGVFLGSASVGNWLVWGVAIGIGAFVYRDIIRRDSRRS
Ga0370499_0031438_935_1117	3300034194	Untreated Peat Soil	MFKVARRVGIAFGSFVIAWLAVSLVAGWLFGSGNILVWVIAAIVGAGVYLDIMRRDRRVA
Ga0370501_0345615_199_390	3300034195	Untreated Peat Soil	MVKAARRVGIAFGSFVIAWLAVSLAAGRLFGSGNILVWVIAVVVGAGVYLDILRRDRRGRRDG
Ga0314782_022296_379_561	3300034661	Soil	MSKTARRVGIAFGSFVIAWLAIALVAVWLFGSGNFLVWVFAAVVGAGVYIYLLWRDRRVG
Ga0364923_0036593_523_705	3300034690	Sediment	MVKVARRVGIAVGSFVIAWLAVSLVAGWLFGSGNFLVWVFAAVVGAGVYLDILRRDRRVG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073995

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign