Metagenome Family F073960

Basic Information
Family ID	F073960
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	72 residues
Representative Sequence	MDDAHALPTDLAECQQLLLAAFQRAAELSRVLDETAASYEELQATHQAALEELSTLKRWIYGRRTEKLV
Number of Associated Samples	109
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.833 % of family members)
Environment Ontology (ENVO)	Unclassified (24.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.79% β-sheet: 0.00% Coil/Unstructured: 40.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05717	TnpB_IS66	94.17
PF13518	HTH_28	1.67
PF04230	PS_pyruv_trans	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3436	Transposase	Mobilome: prophages, transposons [X]	94.17

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.17%
Host-Associated	Host-Associated	15.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.17%
Aquatic	Environmental → Aquatic	30.00%
Plants	Host-Associated → Plants	15.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.17%
Freshwater	Environmental → Aquatic → Freshwater	14.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.33%
Peat	Environmental → Terrestrial → Peat	10.00%
Sediment	Environmental → Aquatic → Sediment	8.33%
Marine	Environmental → Aquatic → Marine	5.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.00%
Lake	Environmental → Aquatic → Freshwater → Lake	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.50%
Loam	Environmental → Terrestrial → Soil → Loam	2.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.67%
Ice	Environmental → Aquatic → Freshwater → Ice	1.67%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.67%
Sand	Environmental → Terrestrial → Soil → Sand	1.67%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.83%
Coastal	Environmental → Aquatic → Marine → Coastal	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Gulf	Environmental → Aquatic → Marine → Gulf	0.83%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.67%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.67%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	1.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.83%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	0.83%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	0.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	10.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.33%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.67%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine	1.67%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.67%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.83%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.83%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	0.83%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000119	Marine microbial communities from chronically polluted sediments in Antarctica -King George Island site S1 sample ANT 01_9.5m	Environmental	Open in IMG/M
3300000132	Marine microbial communities from chronically polluted sediments in Antarctica - King George Island site S2 sample ANT 05_23.45m	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009083	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009448	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek Source	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015063	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3b, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300025718	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027872 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028156	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_50m	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028598	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)	Environmental	Open in IMG/M
3300028651	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032272	Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrow	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
KGI_S1_ANT01_95mDRAFT_101232931	3300000119	Marine	MDNAHVLPDDLEQCQQRLLASIKQAAELERVLDETAASHEELKAAHQATIVELN
KGI_S2_ANT05_2345mDRAFT_10658542	3300000132	Marine	MDDAQQLPNDLVECQQLLLAAFKQASELERVLDETAASHEELIEKHEATVDELNALKRWI
INPhiseqgaiiFebDRAFT_1015464453	3300000364	Soil	MDDDHALPTDLAECQQLLLAAIQRAEELSRVLDETAASYDELQATHLVALEELS
INPhiseqgaiiFebDRAFT_1015466791	3300000364	Soil	MDDDKALPNDLAKCHQLLLAAFNQATELERVLDETAAAYESLQATHQAALEELS
JGI1027J11758_121223051	3300000789	Soil	MDDDKALPNDLAKCHQLLLAAFNQATELERVLDETAAAYESLQATHQAALEELSALK
JGI1027J12803_1013006686	3300000955	Soil	MDDDKALPNDLAKCHQLLLAAFNQATELERVLDETAAAYESLQATHQAALEELSALKRWIYGRRTEK
JGI1027J12803_1025579363	3300000955	Soil	MDDARALPDDLNECHQLLLAAFREASELERVLNETAASYESLQATHQAALEELSALKRWIYGRRTEKIVEGDGQGHLFEI
JGI10216J12902_1117236352	3300000956	Soil	MDDDNALPNDLAECQRLLLAAFQRAAELSRVLDETAASYGELQTTHQAALDELSALKRWIYGRRTEKLVEGEGQRHLFDLESSSTSSP
C688J18823_104916853	3300001686	Soil	MGVMDDAHALPNDLNKCHQLLLAAFKHASELERVLDETAASYESLQAMHQATLEELSALKRWIYGRRTEKI
Ga0062387_1008669842	3300004091	Bog Forest Soil	MDDAHALPSDLAECQQLLLAAFQRAAELSRVLDETAASYEELQATHQAALEELSTLKRWIYGRRT
Ga0062593_1002057211	3300004114	Soil	MDDDKALPNDLAECHQLLLAAFREASELERVLDETAASYESLQATHQAALEELSALKRWIYGRRTGKIVEGDGQ
Ga0062593_1033929432	3300004114	Soil	MDDDNALPTDLAECQQLLLAAFQRAAELSRALDETAASYEELQATHQAALEELSALKRWIYGRRTEK
Ga0055489_101432641	3300004145	Natural And Restored Wetlands	MGVMDDDNALPTDLAECHQLLLAAFQQAAELSRVLEETAASYEELQATHQAALEELSALK
Ga0062590_1028308432	3300004157	Soil	MDDAHALPNDLDKCHQLLLVAFKQASELERVLDETAASYESLQVTHQAALEELSALKRWIYGRRTEKIVEGEGQCH
Ga0063356_1030906251	3300004463	Arabidopsis Thaliana Rhizosphere	MDDDNALPNDLAECQRLLLAAFQRAAELSRVLDETAASYGELQTTHQAALDELSALKRWIYGRRTEKLVEGAGQRHLFELESSHNGSAA*
Ga0062592_1001486873	3300004480	Soil	MDDDKALPNDLAECHQLLLAAFREASELERVLDETAASYESLQATHQAALEELSALKRWIYGRRTEKIVEGDGQQHLFELEHCSTTAAPLERRQELSR
Ga0062591_1025482361	3300004643	Soil	MDDAHALPNDLDKCHQLLLVAFKQASELERVLDETAASYESLQVTHQAALEELSAL
Ga0066679_102735003	3300005176	Soil	MDDAHALPNDLIECHQLLLAAFREASELERVLDETAASYESLQATHQAALEELSALKRWIYGR
Ga0070665_1022993552	3300005548	Switchgrass Rhizosphere	MDDAPALPDDLDKCHQLLLAAFKQATELERVLEKTAVSYEELQKTHQAALEEL
Ga0066905_1003493951	3300005713	Tropical Forest Soil	MDDAQALPDDLDKCHELLLAAFKQATELERVLDETAASYESLQAAHQAALEELSALKRWIYGRRTEKLVEGLGQGHL
Ga0075024_1007307712	3300006047	Watersheds	MVVMDDGRPLPNDLGECRRLLLAALRRAEELSRVLDETAASYDELQATHQAALEELSALKRWIYGRRTEKIVE
Ga0075018_106208592	3300006172	Watersheds	MDDNNTLPTDLAECQQLLLAAFQRADELSRVLDETAASYEELQATHQAALEELSALKRWIYGRRTEKLVEGEGQRHLFDLEPSTTTAQP
Ga0075021_110929152	3300006354	Watersheds	MDDAHALPNDLAECQRLLVAAFQRAAELSRVLEETAASYGELQATHQAALEELS
Ga0075428_1013531783	3300006844	Populus Rhizosphere	MDDDNALPNDLAECQRLLLAAFQRAAELSRVLDETAASYGELQTTHQAALDELSALKRWIYGRRTEK
Ga0073928_109310162	3300006893	Iron-Sulfur Acid Spring	MDDAHTLPTDLAECQRLLVAAFQRAAELSRVLEATAASYGELQTTHQAALAELSALKRWIYGRRTEKLIEG
Ga0079216_106650723	3300006918	Agricultural Soil	MDDAHALPADLDKCHQLLLAAFKQATELERVLDETAASYEALQAAHQVALEELSALKRWIYGRRTEKIVEGEGQGHLFDLE
Ga0099795_103225673	3300007788	Vadose Zone Soil	MDDGRPLPNDLGECHQILLAALLRAEELSRVLDETAASYDELQATHQAALEELSALKRW
Ga0105047_104899802	3300009083	Freshwater	MVVMDDGRPLPNDLGECRQLLLAALRRAEELSRVLDETAASYEELQATHQVALDELSALK
Ga0105243_121284092	3300009148	Miscanthus Rhizosphere	MDDAHALPNDLDKCHQLLLAAFREASELERVLDETAASYASLQAAHQATLEELSALKRWIYGRRTEKIVDGDGQQHLFELEHCSKAATSLEPRQELA
Ga0111538_115731323	3300009156	Populus Rhizosphere	MDDGRLLPNDLGECHQLLLAALRRTEELSRVLDETAASYEELQATHQVALEELSALKRWIYGRRTEKIVEGEGQCHLFDLEPSNATAALLEPKPDLS
Ga0105242_132922731	3300009176	Miscanthus Rhizosphere	MDDAHALPNDLAECQRLLLAAFQRAAELSRVLEETAVSYGELQATYQAALDELSALKRWIYGRRAEKIVEGEGQRHLFDLESSSPSTLPLGLT
Ga0114940_102699751	3300009448	Groundwater	MDDDHALPTDLAECHQLLLAAFQQAAELSRVLDETAASYDELQATHQVALEELSALKR
Ga0105237_117523062	3300009545	Corn Rhizosphere	MDDAHALPNDLDKCHQLLLAAFREASELERVLDETAASYESLQATHRATLEELSALK
Ga0105249_106760481	3300009553	Switchgrass Rhizosphere	MDDDKALPNDLAECHQLLLAAFREASELERVLDETAASYESLQATHQAALEELSALKRWIYGRRTEKIVEGD
Ga0105063_10898211	3300009804	Groundwater Sand	MDDDRSLPTDLAECHQLLLAAFQQAAELSRVLDETAASYDELQTTHQAALEELN
Ga0126315_112527242	3300010038	Serpentine Soil	MDDAHVLPNDLDKCHQLLLAAFREASELERVLDETAASYESLQATHQAALEELSALKRWIYGLRSEKIVEGEGQY
Ga0126306_112150262	3300010166	Serpentine Soil	MDDAQNLPEDLADCQRLLLAALQRAAELSRVLEETTASYGELQATHQAALEELS
Ga0136847_112107231	3300010391	Freshwater Sediment	MDDARALPNDLAECQRLLVAAFQRAAELSRVLEETAASYGELQTTHQAALEELSALKRWIYGRRTEKLVEGEGQRHLFD
Ga0134121_118833882	3300010401	Terrestrial Soil	MVVMDDGRPLPNDLGECHQLLLAALRRAEELSRVLDETAASYDQLQATHQVALEELSALKRWIYGRRTEKFVEGEGQCHLFDLAPSGTMAT
Ga0137344_10266951	3300012159	Soil	MDDDHSLPTDLAECHQLLLAAFQQAAELSRVLGEKAASYEELQATHQAALEELSALKRWIYGRRTEKIVEGEGQQHLFDLEPSSTTATPLEPRQELSRPVATGR
Ga0137319_10485761	3300012167	Soil	MDDDSALPTDLAECHQLLLAAFQQAAELSRVLDEPAASYGELQATHQAALEELSALKRWIYGRRTEKIVEGEGQQ
Ga0137364_102814811	3300012198	Vadose Zone Soil	MDDAQALPNDLTECHQLLLAAFREASELERVLDETAASYESLQATHQAALEELSALKRWIYGRRTEKIVEGDGQQHLFEIESFSTTAA
Ga0137435_11185423	3300012232	Soil	MDDAHALPDDLAACQRHLLAAFQRAAELSRVLEETAASYGELQATHQATLEELSALKRW
Ga0137360_114782012	3300012361	Vadose Zone Soil	MDDDNALPNDLSECHQLLLAALQRAEELSRILDETAVSYEELQATHQAALDELSALKRWI
Ga0157301_103658311	3300012911	Soil	MDDDHALPTDLAECQQLLLAAMQRAEELSRVLDETAASYDELQAIHQVALEELSALKR
Ga0137413_106542233	3300012924	Vadose Zone Soil	MDDAHALPNDLTECHQLLLAAFREASELERVLDETAASYESLQATHQAALEELSALKRWIYGPRTEKIVEGDGQGHLFEIEPSSPTATPLATR
Ga0137413_109275201	3300012924	Vadose Zone Soil	MVVMDDGRPLPNDLGECHQILLAALLRAEELSRVLDETAASYDELQATHQAALEELSALKRWIYGRRTEKIVEGEGQCHLFDLEPSNATATLLEPKPELSHPA
Ga0164241_102976351	3300012943	Soil	MDDAHALPNDLDKCHQLLLAAFKQATELERVLDETAASYESLQATHQAALEELSALKRWIYGRRTEKIVEGEGQYHLFDL
Ga0164308_122327871	3300012985	Soil	MDDAHALPNDLDKCHQLLLAAFREASELERVLDETTASYESLQATHQAALEELSALKRWIYGRRTEKIVEGDGQQHLF
Ga0157374_113696703	3300013296	Miscanthus Rhizosphere	MDDAPALPDDLDKCHQLLLAAFKQATELERVLEKTAVSYEELQKTHQAALEELSAL
Ga0075326_12264222	3300014271	Natural And Restored Wetlands	MDDDHDLPTDLGECQQLLLAAFRRAEELSRVLDATAASYEDLQATHQAAVDELD
Ga0075343_11784852	3300014317	Natural And Restored Wetlands	MDDAHALPDDLHKCQQLLLAAFHQATELERVLDETAASYEALQTAHQAALEELSALKRWIYGRRTE
Ga0157379_112272141	3300014968	Switchgrass Rhizosphere	MDDAPALPDDLDKCHQLLLAAFKQATELERVLEKTAVSYEELQKTHQAALEELSALKRWIYGRRTEK
Ga0157376_107855561	3300014969	Miscanthus Rhizosphere	MDDDHALPTDLSECQQLLLAAFQQASELERVLDETAASYEALQAAHQATLEELSALKRWIYGRRTEKIVE
Ga0167649_1091093	3300015063	Glacier Forefield Soil	MDDAHALPTDLAECQQLLLAAFQRAAELSRVLEETAASYEELQTTHQAALAELSAL
Ga0137409_103910454	3300015245	Vadose Zone Soil	MDDAHPLPDDLAACQRLLLAAFQKTAELSRVLDETAASYEELQATHQAALDELHVLKRWIYGRRTEKLVEGEGQRHLFELESSSMPPPPLEL
Ga0187787_103623472	3300018029	Tropical Peatland	MDDAHDLPTDLAECQQLLLAAYKQATELERVLDETATSYEALQLAHQAALEELSALKRWIYGR
Ga0184615_101820081	3300018059	Groundwater Sediment	MDDAHTLPNDLAECQRLLLAAFQRAAELSRVLEETAASYGELQTTHQAALEELSALKRWIYGRRTEKLVEGEGQRHLFDLEPPNATATLLEPTP
Ga0184639_105138902	3300018082	Groundwater Sediment	MDDDHALPNDLGECHQLLLAAHHQAAELSRVLDETAATYDELQATHQATLEELSALKRWIYGRRTEKLVEGEGQRHLFDLESSSTTA
Ga0184629_102838681	3300018084	Groundwater Sediment	MDDGRPLPNDLGECHQLLLAALRRAEELSRVLDETAASSDELHATHQAALEELSALKRWIYGRRTEKIVEG
Ga0190265_104797754	3300018422	Soil	MDDAHALPNDLAECQRLLLADCQRAAELSRVLEETAASYGELQATHQAALEELSALKRWIYGRRTEKLVEGEGQRHLFDLESSSPAAQPLEPTSELPLQ
Ga0190265_126631992	3300018422	Soil	MDDAPLPDDLDKCHQLLLAAFKQATELERVLDETAASYESLQAAHQATLEELSALKRWIYGRRTEKIVEGDGQRHLFELE
Ga0190272_107241153	3300018429	Soil	MDDAHALPDDLAACQRLLLAAFRQASELERVLDETAASYEELKETHQAALDELHRLKR
Ga0190272_118245252	3300018429	Soil	MDDDYALPNDLVECQRLLLAAFQRAAELSRVLEETAASYGELQATHQAALEELSALKRWIYGRRTE
Ga0190272_131374741	3300018429	Soil	MVVMDNGRPLPNDLGECHQLLLAALRRAEELSRVLDETAASYEELQATHQVALDELSALK
Ga0190268_108213682	3300018466	Soil	MVVMDDDHSLPTDLAECHQLLLAAFQQAAELSRVLDETAASYDELQATHQAALEELSTLKRWIYGRRTEKIVEGEGQQHLFDLEPSSTTVTPLE
Ga0190268_118673872	3300018466	Soil	MDDARALPDDLEKCHQLLLAAFKQATDLERVLDETAASYEALQAAHQAALEELSALKRWIYGRR
Ga0190274_125020381	3300018476	Soil	MDDAHALPNDLAECQRLLLATFQRAAELSRVLEETAASYGELQTTHQAALEELSALKRWIYGPRTEKLVEGDGQRHLFDL
Ga0190271_135616792	3300018481	Soil	MDDAHALPNDLDKCHQLLLAAFREASELERVLSETAASYESLQATHQAALEE
Ga0190264_107641121	3300019377	Soil	LLAAFRQASELERVLDETAASYEELKETHQAALDELHRLKRWIYGQRRERLVEGEGQHHLFELETSSEATLPTETPVNEPRPHVAAPSR
Ga0179594_103664181	3300020170	Vadose Zone Soil	MVVMDDGSPLPNDLGECRQLLLAALRRAEELSRVLDETAASYELQATHQAALEELSALKRWIYG
Ga0210379_102099721	3300021081	Groundwater Sediment	MDNDNALPTDLAECHQLLLAAFQQAADLSRVLEETAVSYEELRATHQAALEELSALKRWIYGRRTEKLVEGA
Ga0210380_101417261	3300021082	Groundwater Sediment	MDDDHGLPTDLAECQQLLLAAVQRAEELSRVLDETAASYDELQATHQAALEELSALKRWIYGR
Ga0210397_103743593	3300021403	Soil	MDDAHALPNDLVMCHQLLLAAFREASELERVLDETAASYESLQATHQAALEELSALKRWIYGR
Ga0210383_111810252	3300021407	Soil	MDDVHALSTDLAECQQLLLAAFQRAAELSRMLDETAASYEELQATHQAALEELSTLKRWIYGRRTEKLVEGAGQRHLFDLD
Ga0210394_110810791	3300021420	Soil	MDDAHALPTDLAECQQLLLAAFQRAAELSRVLDETAASYEELQATHQAALEELSTLKRWIYGRRTEKLV
Ga0209986_102079461	3300024433	Deep Subsurface	MDDAHALPDNLAACQRLLLAAFQKTSELSRVLDETAASYEELQATHQAALDELNALKRWIYGRRTEKLVEGEGQRHLFDLESSSPFAPPLEPTPESQRL
Ga0209123_11655243	3300025718	Arctic Peat Soil	MDDAHALPDDLAACQRLLLAAFQKTTELSRVLDETAASYEELQATHQAALDELNALKRWIYGRRTEKLVE
Ga0209584_101740193	3300025878	Arctic Peat Soil	MDDAHALPTDLAECQRLLLAAFQRAAELSRVLEETAASYEELQTTHQAALEELSALKRWIYGRRTEKLVEGQGQRHLFDL
Ga0207706_113022692	3300025933	Corn Rhizosphere	MVVMDDGRPLPNDLGECHQLLLVALRRAEELSRVLDETAASYDELQATHQVALEELSALK
Ga0207686_113482982	3300025934	Miscanthus Rhizosphere	MDDAHALPNDLAECQRLLLAAFQRAAELSRVLEETAVSYGELQATYQAALDELSALKRWIYGRRAEKIVEGEGQRHLFDLESSSPSTLPL
Ga0209861_10287841	3300027332	Groundwater Sand	MDDGRPLPNDLGECHQLLLAALRRVEELSRVLDETAASYDELQATHQVALEELSALKRWIYGRRTEKIVEGEGQQHLFDL
Ga0209421_10678693	3300027432	Forest Soil	MDDDIALPNDLGECHQLLMAALRRVEELSRVLDETAATYDQLQATHQAALE
Ga0209998_101938641	3300027717	Arabidopsis Thaliana Rhizosphere	MVVMDDGRLLPNDLGECHQLLLAALRRTEELSRVLDETAASYEELQATHQVALEELSALKRWIYGRRTEKIVEG
(restricted) Ga0255058_104382181	3300027872	Seawater	MDDAHALPSDLAECQQLLLAAFKQASELERVLDETAASHEQLKEIHEATVDELNRLKRWIYGRRRE
Ga0209486_103899843	3300027886	Agricultural Soil	MDDAHALPDDLDECHQLLLAAFQQATELERVLDRTAASYEALQAAHQAALEELSALKRWIYGRRT
Ga0209048_105292253	3300027902	Freshwater Lake Sediment	MDDAHTLPTDLAECQRLLLAAFQRAAELSRVLEETAASYGELQATHQATLEELSALKRWIYGRRTEKLVEGEGQRHLFDLEPSVP
Ga0209069_104444203	3300027915	Watersheds	MVVMDDGRPLPNDLGECRRLLLAALRRAEELSRVLDETAASYDELQATHQAALEELSALKRWIYGRRTEKIVEG
Ga0268281_10468831	3300028156	Saline Water	MDNAPELPNDLDQCQRLLLAAFKQASQLERVLDETAASYEELQATHQATLEELNR
Ga0268264_113371443	3300028381	Switchgrass Rhizosphere	MDDDNALPNDLAECQRLLLAAFQRAAELSRVLEETAVSYGELQTTYQAALDELSALKRWI
Ga0265306_105194262	3300028598	Sediment	MGVMDNAHALPDDLEQCQQLLLASIKQAAELERVLDETAASHEELKAAHEATIVELNRLKQWVFGRRS
Ga0302171_100485431	3300028651	Fen	MDDAHALPTDLAECQRLLLAAFQRAAELSRVLEETAASYGELQATHQAALEELSALKRWIYGRRTEKLVEGEGQRHLFDLEPST
Ga0311332_105902081	3300029984	Fen	MDDAHALPRDLAECQRLLLAAFQRAAELSRVLEETAASYEELQTTHQAALEELSALKRWIYGRR
Ga0311332_111361771	3300029984	Fen	MDDAHALPTDLAECQRLLVAAFQRAAELSRVLEETAASYGELQATHQAALEELSALKRWIYARRTEKLVEGEGQRHLFDLE
Ga0311332_112894662	3300029984	Fen	MDDAHALPTDLAECQQLLLAAFQRAAELSRVLDETAASYEELQTTHQAALEELSALKRWIYGRRTEKLVEGEGQRHLFDL
Ga0311334_115068601	3300029987	Fen	MDDAHALPDDLAACQRLLLAAFQKTTELSRVLEETAASYGELQTTHQAALEEL
Ga0311337_104243853	3300030000	Fen	MVVMDDDRPLPNDLGECHQLLLAALRRAAELSRVLDETAASYDELQATHQAALEELSALKWW
Ga0302286_104369531	3300030047	Fen	MDDAHALPDDLAACQRLLLAAFQKTTELSRVLDETAASYEELQATHQAALDELNALKRWI
Ga0311333_102716984	3300030114	Fen	MDDAHALPTDLAECQRLLLAAFQRAAELSRVLEETAASYEELQTTHQAALEELSA
Ga0311335_109335761	3300030838	Fen	MVVMDDGRPLPNDLGECHQLLLAALRRAAELSRVLDETAASYDELQATHQAALEELSALKRWIYGRRTEKIVEGD
Ga0311366_109713141	3300030943	Fen	MDDAHALPNDLAECQRLLLAAFQRAAELSRVLDETASSYEELQTTHQAALEELSTLKRWIYGRRTEKLVEGEGQRHLFDLESPSPSAPLLELTPELP
Ga0311366_116132161	3300030943	Fen	MDDAHALPTDLAECQRLLLAAFQRAAELSRVLEETAASYEELQTTHQAALEELSALKRWIYGRRTEKLVEGQGQRHLFDLESSSLSAPPLG
Ga0265332_103182671	3300031238	Rhizosphere	MDDAHPLPNDLAECQRLLLAAFQRAAELSRVLEKTAASYGELQATHQAALEELSALKRWIYGRRTEKLVEGEGQRHLFDLESSSLSTPPLALTPEL
Ga0265328_104357732	3300031239	Rhizosphere	VGVMDDAHALPNDLDKCHQLLLAAFRQASELERVLDETAASYESLQATHQATLEELSALKRWIYGRRTEKIVEGDGQYHLFNLEP
Ga0265325_104942441	3300031241	Rhizosphere	MDDAHALPNDLVKCHQLLLAAFREASELERVLDETAASYESLQATHQATLEELSALKRWIYGRRT
Ga0265316_105878891	3300031344	Rhizosphere	MDDAHPLPNDLAECQRLLLAAFQRAAELSRVLEKTAASYGELQATHQAALEELSALK
Ga0311364_106769591	3300031521	Fen	MVVMDDDRPLPNDLGECHQLLLAALRRAAELSRVLDETAASYDELQATHQAALE
Ga0315288_105280574	3300031772	Sediment	MDDAHVLPTDLAECQQLLLAAFQRAAELSRVLDETAASYEELQTTHQAALEELSALKRWIYGR
Ga0315290_106799841	3300031834	Sediment	MDDDNALPTDLAECQQLLLVAFQQAEELSRVLDETAASYEELQETHQAAIDELNALKRWIYGRRTEKISE
Ga0310907_100679131	3300031847	Soil	MVVMDDGRLLPNDLGECHQLLLAALRRTEELSRVLDETAASYEELQATHQVALEELSALKRWIYGRRTEKIVEGEGQCHLFDLEPSNATAALLEPQPDLSR
Ga0315297_104734731	3300031873	Sediment	MDDAHALPDDLAACQRLLLAAFQKTTELSRVLDETAASYEELQATHQAALDELNALKRWIYGRRT
Ga0315278_109090573	3300031997	Sediment	MDDAHVLPDNLAACQRLLLAALQKTSELSRVLDETAASYEELQATHQAALDELSALKRWIYGRRTEKLVEGEGQRHLFDLAPLATTAQP
Ga0315274_110221961	3300031999	Sediment	MDDAHALPNDLAECQRLLVAAFQRAAELSRVLDETAASYEELQTTHQAALAELSALKRWIYGRRTEKLVEGEGQRHLFDLESPSPSAPLLKLTPAL
Ga0310897_105987391	3300032003	Soil	MVVMDDGRLLPNDLGECHQLLLAALRRTEELSRVLDETAASYEELQATHQVALEELSALKRWIYGRRTEKIVEGEGQCHLFDLEPSNATAALLEPKPDLSRPAAMER
Ga0315284_108440451	3300032053	Sediment	MDDDNALPTDLAECHQLLLVAFQQAEELSRVLDETAASYEELQATHRAALEELSALK
Ga0315277_107751463	3300032118	Sediment	MDDAHVLPDNLAACQRLLLAALQKTSELSRVLDETAASYEELQATHQAALDELSALKRWIYGRRTEKLVEGEGQRHLFDL
Ga0316189_107757333	3300032272	Worm Burrow	MDNAHALPDDLAQCQQLLLASIKQAAELERVLDATAASHEELKAAHQATIVELNRLKQWVFGR
Ga0315287_122049122	3300032397	Sediment	MDDAHALPNDLAECQRLLLAAFQRAAELSRVLEETAASYGELQTTHQAALEELSALKRWIYG
Ga0335397_106861273	3300032420	Freshwater	MVVMDDGRPLPNDLGECRQLLLAALRRAEELSRVLDETAASYEELQATHQVALDELSA
Ga0315273_118485572	3300032516	Sediment	MDDAHVLPDNLAACQRLLLAALQKTSELSRVLDETAASYEELQATHQAALDELSALKRWIYGRRTEKLVEGE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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