Metagenome / Metatranscriptome Family F073875

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073875
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	68 residues
Representative Sequence	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDNGIQHALCFYDPAYAKRVRELRPNTGH
Number of Associated Samples	97
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	23.33 %
% of genes from short scaffolds (< 2000 bps)	82.50 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (26.667 % of family members)
Environment Ontology (ENVO)	Unclassified (38.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.92% β-sheet: 16.67% Coil/Unstructured: 60.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF04325	DUF465	7.50
PF07045	DUF1330	5.83
PF01494	FAD_binding_3	5.83
PF01209	Ubie_methyltran	5.00
PF02668	TauD	5.00
PF01977	UbiD	4.17
PF00072	Response_reg	2.50
PF00596	Aldolase_II	2.50
PF09361	Phasin_2	2.50
PF03401	TctC	1.67
PF01814	Hemerythrin	0.83
PF00800	PDT	0.83
PF13442	Cytochrome_CBB3	0.83
PF13683	rve_3	0.83
PF04140	ICMT	0.83
PF01883	FeS_assembly_P	0.83
PF04290	DctQ	0.83
PF06078	DUF937	0.83
PF02880	PGM_PMM_III	0.83
PF01609	DDE_Tnp_1	0.83
PF03459	TOBE	0.83
PF00155	Aminotran_1_2	0.83
PF00034	Cytochrom_C	0.83
PF04392	ABC_sub_bind	0.83
PF00582	Usp	0.83
PF01557	FAA_hydrolase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	11.67
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	5.83
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	5.83
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	5.83
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	5.83
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	5.00
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	5.00
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.00
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	4.17
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.67
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.83
COG0077	Prephenate dehydratase	Amino acid transport and metabolism [E]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.83
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.83
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.83
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.83
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.83
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.83
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.67 %
Unclassified	root	N/A	35.00 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.33 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	6.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.17 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.17 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.50 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.17 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.50 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.83 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.83 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.17 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	2.50 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.83 %
unclassified Tardiphaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga	0.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.83 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.17 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1.67 %
Tardiphaga sp. OK245	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. OK245	0.83 %
Pseudolabrys sp. FHR47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	0.83 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.83 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.83 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig367167	Not Available	678	Open in IMG/M
3300000719\|JGI12378J11916_104069	Not Available	577	Open in IMG/M
3300000721\|JGI12410J11868_104252	Not Available	551	Open in IMG/M
3300001385\|JGI20193J14888_1001331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6853	Open in IMG/M
3300001385\|JGI20193J14888_1016097	Not Available	1336	Open in IMG/M
3300001402\|JGI20195J14853_1034212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300001402\|JGI20195J14853_1048466	Not Available	547	Open in IMG/M
3300002549\|JGI24130J36418_10142572	Not Available	519	Open in IMG/M
3300003369\|JGI24140J50213_10080096	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300003861\|Ga0031654_10026618	Not Available	1667	Open in IMG/M
3300004009\|Ga0055437_10117648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300004019\|Ga0055439_10179028	Not Available	671	Open in IMG/M
3300004020\|Ga0055440_10081995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	749	Open in IMG/M
3300004020\|Ga0055440_10103745	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300004022\|Ga0055432_10029978	Not Available	1200	Open in IMG/M
3300004052\|Ga0055490_10056136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1039	Open in IMG/M
3300004058\|Ga0055498_10032221	All Organisms → cellular organisms → Bacteria → Proteobacteria	846	Open in IMG/M
3300004061\|Ga0055487_10011024	Not Available	1114	Open in IMG/M
3300004062\|Ga0055500_10118108	Not Available	604	Open in IMG/M
3300004643\|Ga0062591_101533127	Not Available	668	Open in IMG/M
3300005204\|Ga0068997_10022851	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300005206\|Ga0068995_10041998	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300005206\|Ga0068995_10109795	Not Available	569	Open in IMG/M
3300005833\|Ga0074472_11492919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2009	Open in IMG/M
3300005938\|Ga0066795_10015888	All Organisms → cellular organisms → Bacteria → Proteobacteria	2100	Open in IMG/M
3300005947\|Ga0066794_10115666	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300005947\|Ga0066794_10156220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300005980\|Ga0066798_10039027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1538	Open in IMG/M
3300005980\|Ga0066798_10221992	Not Available	508	Open in IMG/M
3300005994\|Ga0066789_10004672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6037	Open in IMG/M
3300005995\|Ga0066790_10318580	Not Available	663	Open in IMG/M
3300006041\|Ga0075023_100505840	Not Available	545	Open in IMG/M
3300006055\|Ga0097691_1005650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7041	Open in IMG/M
3300006174\|Ga0075014_100702762	Not Available	588	Open in IMG/M
3300006224\|Ga0079037_102364801	Not Available	530	Open in IMG/M
3300006354\|Ga0075021_10364013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	903	Open in IMG/M
3300006640\|Ga0075527_10080659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	890	Open in IMG/M
3300006642\|Ga0075521_10126513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1188	Open in IMG/M
3300006642\|Ga0075521_10133529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1157	Open in IMG/M
3300006642\|Ga0075521_10557855	Not Available	563	Open in IMG/M
3300006864\|Ga0066797_1054412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1408	Open in IMG/M
3300006949\|Ga0075528_10229228	Not Available	507	Open in IMG/M
3300006972\|Ga0075518_1129257	Not Available	518	Open in IMG/M
3300009010\|Ga0075519_1026457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300009029\|Ga0066793_10150667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1356	Open in IMG/M
3300009029\|Ga0066793_10211802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1127	Open in IMG/M
3300009031\|Ga0103682_10723304	Not Available	514	Open in IMG/M
3300009091\|Ga0102851_10082427	All Organisms → cellular organisms → Bacteria → Proteobacteria	2723	Open in IMG/M
3300009167\|Ga0113563_10287672	Not Available	1696	Open in IMG/M
3300009168\|Ga0105104_10228123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1015	Open in IMG/M
3300009660\|Ga0105854_1201706	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300010343\|Ga0074044_10125224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1724	Open in IMG/M
3300011419\|Ga0137446_1074186	Not Available	787	Open in IMG/M
3300011431\|Ga0137438_1109990	Not Available	841	Open in IMG/M
3300011442\|Ga0137437_1126122	Not Available	882	Open in IMG/M
3300012209\|Ga0137379_11162632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	678	Open in IMG/M
3300012931\|Ga0153915_10930489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1011	Open in IMG/M
3300012964\|Ga0153916_10202736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1975	Open in IMG/M
3300012964\|Ga0153916_11294153	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	807	Open in IMG/M
3300013092\|Ga0163199_1405075	Not Available	506	Open in IMG/M
3300014200\|Ga0181526_10970493	Not Available	534	Open in IMG/M
3300014321\|Ga0075353_1174219	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300014498\|Ga0182019_10086226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1896	Open in IMG/M
3300017959\|Ga0187779_10117664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1615	Open in IMG/M
3300017974\|Ga0187777_10008774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6397	Open in IMG/M
3300017974\|Ga0187777_10174822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1440	Open in IMG/M
3300018029\|Ga0187787_10025107	Not Available	1627	Open in IMG/M
3300018032\|Ga0187788_10019334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2162	Open in IMG/M
3300018060\|Ga0187765_10375185	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300018083\|Ga0184628_10000710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17214	Open in IMG/M
3300021090\|Ga0210377_10041906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3208	Open in IMG/M
3300025313\|Ga0209431_10177424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1686	Open in IMG/M
3300025313\|Ga0209431_10225311	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1479	Open in IMG/M
3300025313\|Ga0209431_10269689	Not Available	1337	Open in IMG/M
3300025314\|Ga0209323_10680511	Not Available	564	Open in IMG/M
3300025322\|Ga0209641_10373264	Not Available	1034	Open in IMG/M
3300025322\|Ga0209641_10975658	Not Available	553	Open in IMG/M
3300025326\|Ga0209342_10207244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1744	Open in IMG/M
3300025457\|Ga0208850_1004258	All Organisms → cellular organisms → Bacteria → Proteobacteria	3143	Open in IMG/M
3300025457\|Ga0208850_1017973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1280	Open in IMG/M
3300025481\|Ga0208079_1037916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1213	Open in IMG/M
3300025481\|Ga0208079_1051766	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300025481\|Ga0208079_1066788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300025481\|Ga0208079_1097085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	547	Open in IMG/M
3300025495\|Ga0207932_1000211	All Organisms → cellular organisms → Bacteria → Proteobacteria	19648	Open in IMG/M
3300025495\|Ga0207932_1115489	Not Available	516	Open in IMG/M
3300025524\|Ga0209817_1088047	Not Available	519	Open in IMG/M
3300025551\|Ga0210131_1079767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. OK245	557	Open in IMG/M
3300025581\|Ga0208355_1033223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1388	Open in IMG/M
3300025604\|Ga0207930_1006022	All Organisms → cellular organisms → Bacteria → Proteobacteria	3759	Open in IMG/M
3300025750\|Ga0209747_1079268	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300025854\|Ga0209176_10142103	Not Available	592	Open in IMG/M
3300025878\|Ga0209584_10009851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3145	Open in IMG/M
3300025878\|Ga0209584_10299332	Not Available	618	Open in IMG/M
3300025888\|Ga0209540_10189316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1224	Open in IMG/M
3300025891\|Ga0209585_10390684	Not Available	567	Open in IMG/M
3300025891\|Ga0209585_10398977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	562	Open in IMG/M
3300025953\|Ga0210068_1002895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2112	Open in IMG/M
3300026291\|Ga0209890_10012738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3391	Open in IMG/M
3300026294\|Ga0209839_10005877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5572	Open in IMG/M
3300026835\|Ga0207782_106579	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300027011\|Ga0207740_1016544	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1013	Open in IMG/M
3300027815\|Ga0209726_10195993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1069	Open in IMG/M
3300027819\|Ga0209514_10061650	All Organisms → cellular organisms → Bacteria → Proteobacteria	2482	Open in IMG/M
3300027894\|Ga0209068_10681838	Not Available	601	Open in IMG/M
3300027902\|Ga0209048_10012086	All Organisms → cellular organisms → Bacteria → Proteobacteria	7710	Open in IMG/M
3300027902\|Ga0209048_10013847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7161	Open in IMG/M
3300027902\|Ga0209048_10103118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2192	Open in IMG/M
3300028563\|Ga0265319_1215324	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300028666\|Ga0265336_10193254	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300031199\|Ga0307495_10066287	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300031226\|Ga0307497_10417224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300031235\|Ga0265330_10081993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1389	Open in IMG/M
3300031241\|Ga0265325_10276663	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031247\|Ga0265340_10147013	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300031249\|Ga0265339_10335129	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300031726\|Ga0302321_102860066	Not Available	564	Open in IMG/M
3300032770\|Ga0335085_11883516	Not Available	610	Open in IMG/M
3300032892\|Ga0335081_11044435	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300034195\|Ga0370501_0088817	Not Available	1030	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.00%
Host-Associated	Host-Associated	5.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.67%
Aquatic	Environmental → Aquatic	33.33%
Plants	Host-Associated → Plants	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.83%
Freshwater	Environmental → Aquatic → Freshwater	14.17%
Marine	Environmental → Aquatic → Marine	11.67%
Sediment	Environmental → Aquatic → Sediment	7.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.00%
Peat	Environmental → Terrestrial → Peat	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	11.67%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.67%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	27.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	11.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.00%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.67%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	26.67%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	11.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	8.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	5.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	5.00%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.50%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.50%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.67%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	0.83%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.83%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000719	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44	Environmental	Open in IMG/M
3300000721	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006972	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-A	Environmental	Open in IMG/M
3300009010	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-I	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009031	Microbial communities from groundwater in Rifle, Colorado, USA - 3D_0.1um	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025524	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-A (SPAdes)	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025953	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026835	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_00519890	2140918008	Soil	MPTENEPIAAEKMRRKPIVALLGKGKDCGQPVMDGQDFRRSDNGIRHTLCFYEPAYAKRVRELKSKTEQ
JGI12378J11916_1040692	3300000719	Tropical Forest Soil	MATETMTAEKMRRKPFVQLLGTCKDCGQPVIAGQEFLRTEHGIEHALCFYEPDYAKRARELKPKTSV*
JGI12410J11868_1042522	3300000721	Tropical Forest Soil	MATETMTAEKMRRKPFVQLLGTCKDCGQPVIAGQEFLRTEHGIEHALCFYEPDYAKR
JGI20193J14888_10013311	3300001385	Arctic Peat Soil	MRREQTETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDNGIRHALCFYDPAYAKCVRELKPNTGQ*
JGI20193J14888_10160974	3300001385	Arctic Peat Soil	VSLRSPAMRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDNGIQHALCFYDPAYAKRARGLKPNTGQ*
JGI20195J14853_10342122	3300001402	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDHGIRHALCFYDPAYAKRARELKPNTGQ*
JGI20195J14853_10484661	3300001402	Arctic Peat Soil	KIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDHGIRHALCFYDPAYAKRARELKPNMGH*
JGI24130J36418_101425721	3300002549	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDHGIRHALCFYDPAYAKRARELKPNMGH*
JGI24140J50213_100800962	3300003369	Arctic Peat Soil	MHTEETMTAEKIRRKSFVTLLGICTDCGQPVKAGQEFLRTDHGIEHALCFYDPSHAKRVRENMPK
Ga0031654_100266182	3300003861	Freshwater Lake Sediment	MPTEPEAIAAEKMRHKRFVALLGMCQDCGQPVIEGQELLRSDNSIQHALCFYDPAYAKRVRELKPDTGQ*
Ga0055437_101176481	3300004009	Natural And Restored Wetlands	MRTEETMMAEKIRRMPFVPLLGTCPDCGKPVLAGQEFSRSDDGIRHALCFYEPAYAKRVRERKKDV*
Ga0055439_101790282	3300004019	Natural And Restored Wetlands	MSDAMRTEETMTAEKMRRRSFVTLLGNCQKCGEPVKAGQEFIRSDDGIQHALCFYDPAYVKRVLRLKAEC*
Ga0055440_100819952	3300004020	Natural And Restored Wetlands	MRTDETLTAEKMRRKSFVTLLGNCQECGQHVKAGQEFMRLDNGIRHALCFYDRAYAKHVRSKTKR*
Ga0055440_101037452	3300004020	Natural And Restored Wetlands	DAMRTEETMTAEKMRRRSFVTLLGNCQKCGEPVKAGQEFIRSDDGIQHALCFYDPAYVKRVLGSKTEH*
Ga0055432_100299782	3300004022	Natural And Restored Wetlands	MRTEETMTAEKMRRRSFVTLLGNCQKCGEPVKAGQEFIRSDDGIQHALYFYDREYAKRVLRLKAEC*
Ga0055490_100561362	3300004052	Natural And Restored Wetlands	MSDAMRTEETMTAEKMRRRSFVTLLGNCQKCGEPVKAGQEFIRSDAGIQHALCFYDPAYVKRVLGSKTEH*
Ga0055498_100322211	3300004058	Natural And Restored Wetlands	MRTEETMTAEKMRRRSFVTLLGNCQECGEPVKAGQEFIRSDDGIQHALCFYDPAYVKRVLASKTEH*
Ga0055487_100110242	3300004061	Natural And Restored Wetlands	MKLDKIGVASLRSRTMNTDETMTAEKIRRKSFVTSLGICQDCGQPVIVGQEFVRLDTGIRHALCFYEPAFAKRAQSAKK*
Ga0055500_101181081	3300004062	Natural And Restored Wetlands	MSDAMRTEETMTAEKMRRRSFVTLLGNCQECGEPVKAGQEFIRSDDGIQHALCFYDPAYVKRVLASKTEH*
Ga0062591_1015331272	3300004643	Soil	MRTEETIAAEKIRRKPFVTVLGYCQDCGEPVLAGQEFCRTDDHLIRHALCFYEPAYAKRVRELKE*
Ga0068997_100228512	3300005204	Natural And Restored Wetlands	MRTVETMTAEKIRRKSFAISLGICQDCGQPVIAGQEFHRSDNSIQHALCLYDPAYAKRVREQKSNTGGV*
Ga0068995_100419981	3300005206	Natural And Restored Wetlands	RRSFVTLLGNCQECGEPVKAGQEFIRSDDGIQHALCFYDPAYVKRVLASKTEH*
Ga0068995_101097952	3300005206	Natural And Restored Wetlands	AMRTVETMTAEKIRRKSFAISLGICQDCGQPVIAGQEFHRSDNSIQHALCLYDPAYAKRVREQKSNTSGV*
Ga0074472_114929193	3300005833	Sediment (Intertidal)	MPTEAEAIASEKMRRKRLVALLGTCRDCRQPIIEGQEFLRSDNGIQHALCFYDPAFAKRVRET*
Ga0066795_100158881	3300005938	Soil	AEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDDGIQHALCFYDPAYAKRVRELRRKTD*
Ga0066794_101156662	3300005947	Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDNGIQHALCFYDPAYAKHVRELKPNTAQ*
Ga0066794_101562201	3300005947	Soil	TMAAEKIRRKPFVTLLGNCQDCGQPVIAGQDFLRSDDSIQHALCFYDPAYAKRVRELRPNTGH*
Ga0066798_100390272	3300005980	Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDDGIQHALCFYDPAYAKRVRELRRKTD*
Ga0066798_102219921	3300005980	Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDNGIRHALCFYDPAYAKRARELKPNTGH*
Ga0066789_100046722	3300005994	Soil	MRTEETMTAEKIRRKSFVTLIGICADCGQPVKGGQEFLRTDHGIQHALCFYDPSHAKRVRENMPKTGQ*
Ga0066790_103185802	3300005995	Soil	MRTEETMTAEKIRRKSFVTLLGICTDCGQPVKGGQEFLRTDHGIQHALCFYDPSHAKRVRENMPKTGQ*
Ga0075023_1005058402	3300006041	Watersheds	MRTVETMTAEKIRRKSFAILLGICQDCGQPVIAGQEFHNTDNGIQHALCLYDPAYAKRV
Ga0097691_100565012	3300006055	Arctic Peat Soil	REQTETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDNGIRHALCFYDPAYAKCVRELKPNTGQ*
Ga0075014_1007027621	3300006174	Watersheds	MRTNETIAAEKMRRKPIVTILGKCYACGQPIIDGHEFRRSDNGIRHTLCFYEPAYAKRVRELKPKTEQ*
Ga0079037_1023648012	3300006224	Freshwater Wetlands	MHTEDTMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRTDSGIQHALCFYEPAYAKRMRELRP
Ga0075021_103640133	3300006354	Watersheds	MHIEETMMAEKIRRRPFVALLGKCEGCGQPVLAGQEFCRSDAVIRHALCFYEPAYAKRVRELKDVQSVS*
Ga0075527_100806592	3300006640	Arctic Peat Soil	MRREQTETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDNGIRHALCFYDPAYAKRARELKPNTGH*
Ga0075521_101265132	3300006642	Arctic Peat Soil	MHTEETMTAEKIRRKSFVTLLGICTDCGQPVKAGQEFLRTDHGIEHALCFYDPSHAKRVRENMPKTGQ*
Ga0075521_101335292	3300006642	Arctic Peat Soil	MRTEETMTAEKIRRKSFVTLIGICADCGQPVKGGQEFLRTDHGIQHALCFYDPSHARRVREDMPKAKQ*
Ga0075521_105578552	3300006642	Arctic Peat Soil	MGTNETIAAEKMRRKPIVALLGKCHACGQPIIEGHEFRRSDNGIRHTLCFYDPAYAKGVRELKSKTEQQ*
Ga0066797_10544121	3300006864	Soil	MPTESETIAAEKMRRKRIVAILGNCQDCGQPVIAGQEFLQSDNGIQHALCFYDPAYAKRVRELRRKTD*
Ga0075528_102292282	3300006949	Arctic Peat Soil	MRTEETMTAEKIRRKPFITVLGNCPDCGQPVIAGQEFLRSDHGIQHALCFYEPAYAKRIRDVRPNTGL*
Ga0075518_11292571	3300006972	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDNGIQHALCFYDPAYAKRVRELRPNTGH*
Ga0075519_10264571	3300009010	Arctic Peat Soil	LAMRTEETIAAEKMRRKRIVAILGNCQDCGQPVIAGQEFLQSDNGIQHALCFYDPAYAKRVRELRPNTGQ*
Ga0066793_101506671	3300009029	Prmafrost Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDHGIRHALCFYDPAYAKRARELKPNTGH*
Ga0066793_102118021	3300009029	Prmafrost Soil	MPTESETIAAEKMRRKRIVAILGNCQECGQPVIAGQGFLRSDNGIRHALCFYDPAYAKRVRELRQTTGR*
Ga0103682_107233042	3300009031	Groundwater	MSTSETMIAEKIRRKPFVTLLGTCQDCGQPVIAGQEFLRLENGIEHALCFYEPAYAKRMRDLKPKTGP*
Ga0102851_100824272	3300009091	Freshwater Wetlands	MHTEDTMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRTDSGIQHALCFYEPAYAKRMRELRPKTGQ*
Ga0113563_102876722	3300009167	Freshwater Wetlands	MHTEDTMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRTDSGIQHALCFYEPAYAKRMRELRPKAGQ*
Ga0105104_102281231	3300009168	Freshwater Sediment	MATHKGTTMRIEETMTAEKMRRKSFVTLLGNCQKCGRPVKAGQEFIRSKNGVQHALCLYDPAYVKRVLRSKTEH*
Ga0105854_12017062	3300009660	Permafrost Soil	MRTEETMTAEKIRRKSFVTLLGICTDCGQPVKAGQEFLRTDHGIEHALCFYDPSHAKRVREDMPKAKQ*
Ga0074044_101252242	3300010343	Bog Forest Soil	MPTENEPITAEKLHRKPIVASLGKCKDCGQPVMEGQDFRRSDNGIRHTLCFYEPAYAKRVRELNLTTEP*
Ga0137446_10741862	3300011419	Soil	MHTEDTMKAEKIRRKPFITVLGNCQDCGQPVLAGQEFLRSESGIEHALCFYEPAYAKRMRELRPKSGQ*
Ga0137438_11099901	3300011431	Soil	MHTAETMMAEKIRRKPFVALFGKCESCGQPVLAGQEFCRSDDVIRHALCFYEPAYAKRVRELKDVQPVG*
Ga0137437_11261222	3300011442	Soil	MHTEETMTAEKIRRRPFVALHGTCEACGQPVLAGQEVCRSDDVIRHALCFYEPAYAKRVRELKDVQPVG*
Ga0137379_111626321	3300012209	Vadose Zone Soil	MGTQEFNAITRVIRMRTEETMNAEKIRRKPFVTVLGNCQDCGQPVIAGQEFLSSEHGIQHALCFYEPAYAKRMRELRPKTGQ*
Ga0153915_109304891	3300012931	Freshwater Wetlands	MHTEETMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRSDSGIQHALCFYEPAYAKRIRELKPKAGQ*
Ga0153916_102027363	3300012964	Freshwater Wetlands	MHTEETMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRADSGIQHALCFYEPAYAKRIRELKPKAGQ*
Ga0153916_112941532	3300012964	Freshwater Wetlands	MRTEETMIAEKIRRKPFIAVLGNCQDCGQPVIAGQEFLSSDGGIQHALCFYEPAYAKRMREMKPKTGQ*
Ga0163199_14050752	3300013092	Freshwater	MYTEDTMKAEKIRRKPFITVLGNCPDCGQPVIAGQEFLRSDSGIQHALCFYEPAYAKRMRELRPKAGQ*
Ga0181526_109704931	3300014200	Bog	MGTNEIISAEEIRRKPIVASLGKCQDCGEPVIEGQEFRRSSGGIQHALCLYDPAYAKRVRELRSKTEQ*
Ga0075353_11742191	3300014321	Natural And Restored Wetlands	TMTAEKMRRRSFVTLLGNCQECGEPVKAGQEFIRSDDGIQHALCFYDPAYVKRVLASKTEH*
Ga0182019_100862264	3300014498	Fen	MHTEETMTAEKIRRKSFVTLIGICTDCGQPVKGGQEFLRTDHGIQHALCFYDPSHAKRVREYMPKAKQ*
Ga0187779_101176642	3300017959	Tropical Peatland	MRTEETMNAEKIRRKPFVTLLGTCQDCGQPVKAGQELLHTDSGIRHALCFYDPLHAKRVRESAPKPAR
Ga0187777_100087749	3300017974	Tropical Peatland	MRTEETIAAEKIRRKPFVTLLGKCQDCGQPVLAGQEFCRTDDVIRHALCFYDPAYAKRVRELKE
Ga0187777_101748222	3300017974	Tropical Peatland	MHTEETMAAEKIRRQPFVNLIGVCQECGGPVKVGQEFLRTDHGIQHALCFYDPAHAKRVRENMAKPAP
Ga0187787_100251073	3300018029	Tropical Peatland	MRTVETMTAEKIRRKSFVILLGICQDCGQPVIAGQEFHRSDNSIQHALCLYDRAYAKRVREQKSNTGGV
Ga0187788_100193343	3300018032	Tropical Peatland	MRTVETMTAEKIRRKSFVILLGICQDCGQPVIAGQEFHRSDNSIQHALCLYDRAYAKRVREQKSNTGGI
Ga0187765_103751852	3300018060	Tropical Peatland	MATETMDAEKMRRKPIVQLVGTCYDCGQPVVAGQEFLRTDHGIQHALCFYEPAFAKRAREAQSKATPSN
Ga0184628_1000071015	3300018083	Groundwater Sediment	MHTEETMTAEKIRRRPFVALHGTCEACGQPVIAGQEVCRSDDVIRHALCFYEPAYAKRVRERKDV
Ga0210377_100419064	3300021090	Groundwater Sediment	MHTEETMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLSSDSGIQHALCFYEPAYAKRMRELGPKTGQ
Ga0209431_101774242	3300025313	Soil	MSTSETMIAEKIRRKPFVTLLGTCQDCGQPVIAGQEFLRLENGIEHALCFYEPAYAKRMRDLKPKTGP
Ga0209431_102253112	3300025313	Soil	MTLNGTDRLNVPTQVIRMHTEETMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRSDSGIQHALCFYEPAYARRMRELRPKAGQ
Ga0209431_102696891	3300025313	Soil	MHTEETMKAEQIRRKPFITVLGNCQDCGQPVIAGQEFLRSDSGIQHALCFYEPAYARRMRELRPKTG
Ga0209323_106805111	3300025314	Soil	MHTEETMKAEQIRRKPFITVLGNCQDCGQPVIAGQEFLRSDSGIQHALCFYEPAYARRMRELRPKAGQ
Ga0209641_103732642	3300025322	Soil	VIELKNRCLTLNGTQQLNAPPQVTRMHTEETMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRSDSGIQHALCFYEPAYARRMRELRPKAGQ
Ga0209641_109756582	3300025322	Soil	MSTSETMIAEKIRRKPFVTLLGTCQDCGQPVIAGQEFLRLENGIEHALCFYEPAYAKRMRDLKPKTEP
Ga0209342_102072443	3300025326	Soil	MHTEETMKAEQIRRKPFITVLGNCQDCGQPVIAGQEFLRSDSGIQHALCFYEPAYARRMRELRPKTGQ
Ga0208850_10042585	3300025457	Arctic Peat Soil	MRTNETMIAETIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDNGIQHALCFYDPAYAKHVRELKPNTAQ
Ga0208850_10179732	3300025457	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQDFLRSDDSIQHALCFYDPAYAKRVRELRRKTD
Ga0208079_10379162	3300025481	Arctic Peat Soil	PAMRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDDGIQHALCFYDPAYAKRVRELRRKTD
Ga0208079_10517664	3300025481	Arctic Peat Soil	MRREQTETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDNGIRHALCFYDPAYAK
Ga0208079_10667882	3300025481	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDHGIRHALCFYDPAYAKRARELKPNTGQ
Ga0208079_10970851	3300025481	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDHGIRHALCFYDPAYAKRARELKPNMGH
Ga0207932_10002116	3300025495	Arctic Peat Soil	MHTEETMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRTDSGIQHALCFYEPAYAKRMREPKPGQ
Ga0207932_11154892	3300025495	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVKAGQEFLQSDNGIQHALCFYDPAYAKRVRELRPNTGQ
Ga0209817_10880471	3300025524	Arctic Peat Soil	MRTEETMAAEKMRRKRIVTLLGNCQDCGQPVIAGQEFLRSDNGIQHALCFYDPAYAKRVRELRPNTGH
Ga0210131_10797672	3300025551	Natural And Restored Wetlands	MSDAMRTEETMTAEKMRRRSFVTLLGNCQKCGEPVKAGQEFIRSDDGIQHALCFYDPAYVKRVLGSKTEH
Ga0208355_10332231	3300025581	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQEFLRSDDGIQHALCFYDPAYAKRVRELRRKTD
Ga0207930_10060222	3300025604	Arctic Peat Soil	MRREQTETMAAEKIRRKPFVTLLGNCQDCGQPVIAEQGFLRSDHGIRHALCFYDPAYAKRARELKPNTGH
Ga0209747_10792682	3300025750	Arctic Peat Soil	MRTEETMTAEKIRRKSFVTLIGICADCGQPVKGGQEFLRTDHGIQHALCFYDPSHARRVREDMPKAKQ
Ga0209176_101421031	3300025854	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQDCGQPVIAGQGFLRSDNGIRHALCFYDPAYAKRARELKPNTGH
Ga0209584_100098513	3300025878	Arctic Peat Soil	MHTEETMTAEKIRRKSFVTLLGICTDCGQPVKAGQEFLRTDHGIEHALCFYDPSHAKRVRENMPKTGQ
Ga0209584_102993322	3300025878	Arctic Peat Soil	MGTNETIAAEKMRRKPIVALLGKCHACGQPIIEGHEFRRSDNGIRHTLCFYDPAYAKGVRELKSKTEQQ
Ga0209540_101893161	3300025888	Arctic Peat Soil	MPTESETIAAEKMRRKPFVAILGKCQDCGQPVLEGHEFLRSDNGIRHALCFYDPAFAKRVRELKSKTGQ
Ga0209585_103906842	3300025891	Arctic Peat Soil	VTLNGTQKLIAPPQVTRMHTEETMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRSDSGIQHALCFYEPAYAKRMRELR
Ga0209585_103989771	3300025891	Arctic Peat Soil	MRTEETMAAEKIRRKPFVTLLGNCQNCGQPVIAGQGFLRSDNGIRHALCFYDPAYAMPAV
Ga0210068_10028952	3300025953	Natural And Restored Wetlands	MSDAMRTEETMTAEKMRRRSFVTLLGNCQKCGEPVKAGQEFIRSDAGIQHALCFYDPAYVKRVLGSKTEH
Ga0209890_100127382	3300026291	Soil	MRTEETMTAEKIRRKSFVTLIGICADCGQPVKGGQEFLRTDHGIQHALCFYDPSHAKRVREDMPKAKQ
Ga0209839_100058772	3300026294	Soil	MRTEETMTAEKIRRKSFVTLLGICTDCGQPVKGGQEFLRTDHGIQHALCFYDPSHAKRVRENMPKTGQ
Ga0207782_1065792	3300026835	Tropical Forest Soil	MATETMTAEKMRRKPFVQLLGTCKDCGQPVIAGQEFLRTEHGIEHALCFYEPDYAKRARELKPKTSV
Ga0207740_10165442	3300027011	Tropical Forest Soil	MATETMTAEKMRRKPFVQLLGTCKDCGQPVIAGQEFLRTEHGIEHALCFYEPDYAK
Ga0209726_101959932	3300027815	Groundwater	MHTEDTMKAEKIRRKPFITVLGNCQDCGQPVIAGQEFLRTDSGIQHALCFYEPAYAKRMRELRPKTGQ
Ga0209514_100616503	3300027819	Groundwater	MATETMIAEKIRRKPFVQLLGTCQDCGQPVVAGQEFLRSEHGIQHALCFYEPEFAKRAREQRPKTNS
Ga0209068_106818382	3300027894	Watersheds	MMAEKIRRRPFVALLGKCEGCGQPVLAGQEFCRSDAVIRHALCFYEPAYAKRVRELKDVQSVS
Ga0209048_100120864	3300027902	Freshwater Lake Sediment	MPTEPEAIAAEKMRHKRFVALLGMCQDCGQPVIEGQELLRSDNSIQHALCFYDPAYAKRVRELKPDTGQ
Ga0209048_100138479	3300027902	Freshwater Lake Sediment	MRTEETMAAEKTRRKPFVTLLGNCQDCGQPVIAGQEFLRSENGIQHALCFYEPAFAKRARELKPNTGQ
Ga0209048_101031186	3300027902	Freshwater Lake Sediment	MPTETETMAAETIRRKPIATLLGNCQDCGQPVKAGQEFLHSDNGIRHALCFYDPAYATYVRELGSNTVSE
Ga0265319_12153241	3300028563	Rhizosphere	STEAMDAEKMRRKRLVQLVGTCQKCGESVKAGQEFLRTDSGVEHALCFYEPAYAERVRALHPAN
Ga0265336_101932542	3300028666	Rhizosphere	MRTDETMVAEKIRRKPFVTLLGVCQDCGQPIKAGQEFLRTDTGIQHALCFYDPSHAKRVRENAPKAAQ
Ga0307495_100662872	3300031199	Soil	VFFVGVGGVKAMRTEVTMTAEKMRRKSFVTLLGNCQKCGQPVKAGQEFIRSDNGIQHALCLYDPAYVKRVLCLS
Ga0307497_104172241	3300031226	Soil	RTEETMTAEKMRRKSFVTLLGNCQECGEPVKAGQEFIRSDNGIQHALCLYDPAYVKRVLTSKTEH
Ga0265330_100819932	3300031235	Rhizosphere	MSTEAMDAEKMRRKRLVQLIGTCPKCGEPVKAGQEFLRSDSGVEHALCFYEPAYAERVRAQHPAN
Ga0265325_102766632	3300031241	Rhizosphere	MSTEAMDAEKMRRKRLVQLVGTCQKCGESVKAGQEFLRTDNGVEHALCFYEPAYAERVRALHPAN
Ga0265340_101470131	3300031247	Rhizosphere	NGDSREVTAMRTDETMVAEKIRRKPFVTLLGVCQDCGQPIKAGQEFLRTDTGIQHALCFYDPSHAKRVRENAPKAAQ
Ga0265339_103351291	3300031249	Rhizosphere	MRTDETMVAEKIRRKPFVTLLGVCQDCGQPIKAGQEFLRTDTGIQHALCFYDPSHAKRVR
Ga0302321_1028600661	3300031726	Fen	MPTETETIAAEKLRRKRIVAILGKCQDCGQPVLEGHEFLRSDNGIRHALCFYDPAFAKRVREPKPNTKL
Ga0335085_118835161	3300032770	Soil	MRTDETMVAEKIRRKPFVTLLGTCPECGQPVKAGQEFLRTDNGVEHALCFYDPAHAKRVRDSTPKTGR
Ga0335081_110444352	3300032892	Soil	MATETMDAEKMRRKPFVQLVGTCQDCGQPVLAGQEFLRTDHGIQHALCFYEPAFAKRAREGKSKAAPSN
Ga0370501_0088817_68_274	3300034195	Untreated Peat Soil	MHTEETMTAEKIRRKSFVTLIGICTDCGQPVKGGQEFLRTDHGIQHALCFYDPSHAKRVREDMPKAKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073875

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences