Metagenome / Metatranscriptome Family F073292

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F073292
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	66 residues
Representative Sequence	YKRRFKQTLRNIGRLLASMLTFRMPGPEVSLDNPQSLKVPYGVALALSTLLFGIGKMWGT
Number of Associated Samples	98
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.67 %
% of genes near scaffold ends (potentially truncated)	95.83 %
% of genes from short scaffolds (< 2000 bps)	84.17 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (29.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.86% β-sheet: 0.00% Coil/Unstructured: 51.14%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF07811	TadE	85.00
PF13400	Tad	6.67
PF07589	PEP-CTERM	2.50
PF11741	AMIN	1.67
PF07973	tRNA_SAD	0.83
PF01478	Peptidase_A24	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.17 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	32.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001144\|JGI12645J13327_100779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300001593\|JGI12635J15846_10878960	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300002917\|JGI25616J43925_10035503	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300004080\|Ga0062385_10367387	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300004082\|Ga0062384_100433290	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300004092\|Ga0062389_104852869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005598\|Ga0066706_10005192	All Organisms → cellular organisms → Bacteria	6397	Open in IMG/M
3300005610\|Ga0070763_10087899	All Organisms → cellular organisms → Bacteria → Acidobacteria	1548	Open in IMG/M
3300005610\|Ga0070763_10578577	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300005921\|Ga0070766_10610317	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300006800\|Ga0066660_11288951	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300009089\|Ga0099828_11018812	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300009522\|Ga0116218_1244580	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300009547\|Ga0116136_1011112	All Organisms → cellular organisms → Bacteria → Acidobacteria	3279	Open in IMG/M
3300009552\|Ga0116138_1009973	All Organisms → cellular organisms → Bacteria → Acidobacteria	3261	Open in IMG/M
3300009630\|Ga0116114_1078040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300009634\|Ga0116124_1188668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300009636\|Ga0116112_1012487	All Organisms → cellular organisms → Bacteria → Acidobacteria	3239	Open in IMG/M
3300009665\|Ga0116135_1006207	All Organisms → cellular organisms → Bacteria → Acidobacteria	4579	Open in IMG/M
3300009762\|Ga0116130_1084167	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300009764\|Ga0116134_1256774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300010339\|Ga0074046_10433719	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300010866\|Ga0126344_1278940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300010880\|Ga0126350_12004452	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300014501\|Ga0182024_10318004	All Organisms → cellular organisms → Bacteria → Acidobacteria	2049	Open in IMG/M
3300014501\|Ga0182024_12405236	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300014657\|Ga0181522_10711140	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300017925\|Ga0187856_1021966	All Organisms → cellular organisms → Bacteria	3227	Open in IMG/M
3300017938\|Ga0187854_10377212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300017946\|Ga0187879_10659282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300017946\|Ga0187879_10768002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300017970\|Ga0187783_10448810	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300018013\|Ga0187873_1080595	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300018030\|Ga0187869_10603540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300018033\|Ga0187867_10408193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300018033\|Ga0187867_10408194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300018034\|Ga0187863_10908141	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300018038\|Ga0187855_10483004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300018044\|Ga0187890_10081142	All Organisms → cellular organisms → Bacteria → Acidobacteria	1897	Open in IMG/M
3300018044\|Ga0187890_10296068	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300018046\|Ga0187851_10463020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300018057\|Ga0187858_10044730	All Organisms → cellular organisms → Bacteria → Acidobacteria	3225	Open in IMG/M
3300018057\|Ga0187858_10312175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300018057\|Ga0187858_10487608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300018090\|Ga0187770_11139852	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300018090\|Ga0187770_11170057	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300019786\|Ga0182025_1005352	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300020580\|Ga0210403_10006268	All Organisms → cellular organisms → Bacteria	9995	Open in IMG/M
3300020581\|Ga0210399_11283834	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300021180\|Ga0210396_10390839	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300021181\|Ga0210388_10067732	All Organisms → cellular organisms → Bacteria → Acidobacteria	3002	Open in IMG/M
3300021401\|Ga0210393_10120725	All Organisms → cellular organisms → Bacteria → Acidobacteria	2094	Open in IMG/M
3300021401\|Ga0210393_10526147	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300021406\|Ga0210386_11417823	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300021407\|Ga0210383_10134134	All Organisms → cellular organisms → Bacteria → Acidobacteria	2099	Open in IMG/M
3300021407\|Ga0210383_10577233	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300021420\|Ga0210394_10384562	All Organisms → cellular organisms → Bacteria → Acidobacteria	1234	Open in IMG/M
3300021420\|Ga0210394_10850504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300021432\|Ga0210384_10410626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1220	Open in IMG/M
3300021433\|Ga0210391_10547436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300021433\|Ga0210391_10734138	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300021476\|Ga0187846_10179557	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300021478\|Ga0210402_10344015	All Organisms → cellular organisms → Bacteria → Acidobacteria	1383	Open in IMG/M
3300021479\|Ga0210410_10025198	All Organisms → cellular organisms → Bacteria	5139	Open in IMG/M
3300021559\|Ga0210409_10429385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300022721\|Ga0242666_1025938	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300022734\|Ga0224571_112488	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300023030\|Ga0224561_1028043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300024227\|Ga0228598_1014566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1555	Open in IMG/M
3300025459\|Ga0208689_1022669	All Organisms → cellular organisms → Bacteria → Acidobacteria	1659	Open in IMG/M
3300027110\|Ga0208488_1053184	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300027559\|Ga0209222_1120790	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300027648\|Ga0209420_1056468	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300027648\|Ga0209420_1197523	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300027737\|Ga0209038_10263578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300027745\|Ga0209908_10087616	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300027853\|Ga0209274_10004620	All Organisms → cellular organisms → Bacteria	6404	Open in IMG/M
3300027855\|Ga0209693_10477100	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300027875\|Ga0209283_10881837	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300027889\|Ga0209380_10295793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300028746\|Ga0302233_10047256	All Organisms → cellular organisms → Bacteria → Acidobacteria	1773	Open in IMG/M
3300028759\|Ga0302224_10106210	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300028773\|Ga0302234_10376235	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300028808\|Ga0302228_10179633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300028866\|Ga0302278_10149883	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300028866\|Ga0302278_10175028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300028882\|Ga0302154_10162893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300028906\|Ga0308309_10331447	All Organisms → cellular organisms → Bacteria → Acidobacteria	1294	Open in IMG/M
3300029917\|Ga0311326_10089610	All Organisms → cellular organisms → Bacteria → Acidobacteria	1718	Open in IMG/M
3300029939\|Ga0311328_10614762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300029943\|Ga0311340_11110406	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300029951\|Ga0311371_10608097	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300030058\|Ga0302179_10055068	All Organisms → cellular organisms → Bacteria → Acidobacteria	1784	Open in IMG/M
3300030507\|Ga0302192_10218369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300030509\|Ga0302183_10070661	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300030509\|Ga0302183_10386651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300030528\|Ga0210277_10474875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300030737\|Ga0302310_10368643	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300030743\|Ga0265461_11829670	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300030813\|Ga0265750_1011628	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300031028\|Ga0302180_10318506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300031234\|Ga0302325_10128087	All Organisms → cellular organisms → Bacteria	4634	Open in IMG/M
3300031234\|Ga0302325_11419087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300031236\|Ga0302324_100129817	All Organisms → cellular organisms → Bacteria	4186	Open in IMG/M
3300031708\|Ga0310686_102934465	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300031708\|Ga0310686_112686333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300031708\|Ga0310686_115875402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300031715\|Ga0307476_10037645	All Organisms → cellular organisms → Bacteria	3248	Open in IMG/M
3300031718\|Ga0307474_10253185	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300031718\|Ga0307474_10352934	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300032160\|Ga0311301_11092970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300032174\|Ga0307470_10947718	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300032515\|Ga0348332_11703111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300032515\|Ga0348332_12470976	All Organisms → cellular organisms → Bacteria → Acidobacteria	1550	Open in IMG/M
3300032898\|Ga0335072_10021310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9110	Open in IMG/M
3300033829\|Ga0334854_112397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300033829\|Ga0334854_147134	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300033829\|Ga0334854_148139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300033888\|Ga0334792_113840	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300034163\|Ga0370515_0112722	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.33%
Host-Associated	Host-Associated	1.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.33%
Aquatic	Environmental → Aquatic	25.00%
Plants	Host-Associated → Plants	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.83%
Freshwater	Environmental → Aquatic → Freshwater	25.00%
Peat	Environmental → Terrestrial → Peat	20.00%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.67%
Cave	Environmental → Terrestrial → Cave	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.00%
Loam	Environmental → Terrestrial → Soil → Loam	10.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.33%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.33%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.67%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.83%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001144	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12645J13327_1007792	3300001144	Forest Soil	RRLKETLGNIGRLLGALLTFRMPAAEVSLDNPQSLKIPYGVALAVTTLGYAVGKLWGRL*
JGI12635J15846_108789602	3300001593	Forest Soil	VGPGVLIDLLVVSVFVAGIMALGLVIYKRRLKETLRNIGRLLGSLVTFHMPAAEVSLDNPQSLKIPYGVALAVTTLGYGVGKLWG*
JGI25616J43925_100355031	3300002917	Grasslands Soil	VAGVMALVLVIYKRRFKQTLRNIGGMLASMLTFRMPAAEVSLDNPESLKVPYGVALALTTLLYGVGKLWGAR*
Ga0062385_103673871	3300004080	Bog Forest Soil	RFGQTMRNIGNLLASMFTFRMPGPEVSLDNPQSLKVPYGVALALTTLLFGIAKMWGAR*
Ga0062384_1004332902	3300004082	Bog Forest Soil	MALGLVIYKRRFKETMRNIGRLLASMLTLRMPGAEVSLDNPQSLKVPYGVALALTTLLFGIGQIWGAR*
Ga0062389_1048528691	3300004092	Bog Forest Soil	GRLLASMATFRMPGTEVSLDNPQSLKVPYGVALALAVVLYGVWNWKLLGAH*
Ga0066706_100051928	3300005598	Soil	SVFVAGLMALALVIYKRRVRQTLRNIGRLLVSLLTFRSPGSEVSLDNPQSLKVPYGVALALTVVGYGIALVSGLA*
Ga0070763_100878991	3300005610	Soil	YKRRFKETLRNIGRLLASMLTLRRPGAEVSLDNPQSLKVPYGVALALTTLLFSIEKMWGAP*
Ga0070763_105785772	3300005610	Soil	LMALGLIVYKRRFGETMRNLAHLVASLLSLRMPGPEVSLDNPRSLKVPYGVALALTVVAYGAGHMWGAG*
Ga0070766_106103172	3300005921	Soil	ALVIYKRRFLQTLRNIGGILVSMVTFHKPSPEVSLDNPQSLKVPYGVALALTTLLFGIHSIWRT*
Ga0066660_112889511	3300006800	Soil	MALALVIYKRRVRQTLRNIGRLSVSLLTFRSPGSEVSLDNPQSLKVPYGVALALTVVGYGIARVSGLS*
Ga0099828_110188121	3300009089	Vadose Zone Soil	LGGVMYKRRFKETLRNIGRLLASMLMFRMPGPEVSLDNQQSLKVPYGVALALTTLLFGIGKMWGAR*
Ga0116218_12445801	3300009522	Peatlands Soil	IMAVGLVIYKRRLGQTLRNIGHLLGSLLTFRMPSAEVSLDNPQSLKVPYGVALAMTVVLYGVSYAWGVR*
Ga0116136_10111125	3300009547	Peatland	VSVFVAGIMALGLVIYKRRFMETLRNIGRLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGRLWGRS*
Ga0116138_10099735	3300009552	Peatland	ALGLVIYKRRFKETLRNIGQLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGRLWGRS*
Ga0116114_10780403	3300009630	Peatland	VFVAGIMALGLVIYKRRFMETLRNIGRLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGKLWGRS*
Ga0116124_11886682	3300009634	Peatland	VIYKRRFKETLRNMGRLLASIFSFRMPGLEVSLDNPKSLKIPYGVALALTTLLFAIARLWGRS*
Ga0116112_10124871	3300009636	Peatland	KRRFRETLRNIGRLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGRLWGRS
Ga0116135_10062077	3300009665	Peatland	AVLADLLMGSIFVAGIMAVALVIYKRRTLETLRNIGRMLGAIFTLHMPGPEVSLDNPQALKVPYGVALALTTVLFCGVWAWKIKWGR*
Ga0116130_10841671	3300009762	Peatland	FRETLRNIGRLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGRLWGRS*
Ga0116134_12567742	3300009764	Peatland	LMISVFMAGIMALALVIYKRRFKETLRNMGRLLASIFSFRMPGPEVSLDNPKSLKIPYGVALALTTLLFAIARLWGRS*
Ga0074046_104337191	3300010339	Bog Forest Soil	MGNIGRLLASMLTFRMPAPEVSLDNPESLKVPYGVALALTMLLYGVVNWKVWGAR*
Ga0126344_12789403	3300010866	Boreal Forest Soil	LSNIGRLLGSLLTFRMPAAEVSLDNPQSLKIPYGVALAVTTLGYAVGKLWGRL*
Ga0126350_120044522	3300010880	Boreal Forest Soil	MALGLVIYKRRFKETMRNIGRLLGSMVMFRMPGTEVSLDNPQSLKVPYGVALALTTLLFGVGKMWGAR*
Ga0182024_103180044	3300014501	Permafrost	ALLDLLMGSIFVAGIMAVVLVIYKRRLKETLHNIGRLLSSMLTFRMPGPEVSLDNPNSLKIPYGVALALTTLLFGIGKLSGKI*
Ga0182024_124052361	3300014501	Permafrost	TLRNIRRMLMSMLTFHMPGPEVSLDNPQSLKIPYGVALAVTTVFYGFLNWKIWRAQ*
Ga0181522_107111402	3300014657	Bog	FKETLRNIARLLGSMLTFRMPAPEVSLDNPNSLKVPYGVALALATVLYGILNWKLWGAR*
Ga0187856_10219661	3300017925	Peatland	ETLRNIGRLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGKLWGRS
Ga0187854_103772121	3300017938	Peatland	KLAGALGAIVGPGVLVDLLMVSVFVAGIMALGLVIYKRRFKETLRNMGRLLASMGTFRMPGPEVSLDNPQSLKIPYGVALALTTVLYGILNLKMGRAG
Ga0187879_106592822	3300017946	Peatland	QISVLVAGIMALALVIYKRRFKETLRNIGRLLVSMLSFRKPGFEVSLDNPQSLKIPKAVALALATVLYGIGKLRGGS
Ga0187879_107680022	3300017946	Peatland	MALALVIYKRRFKETLRNMGRLLASIFSFRMPGLEVSLDNPKSLKIPYGVALALTTLLFGIGKLWGRS
Ga0187783_104488103	3300017970	Tropical Peatland	LLIGSIFVAGIMALGLVIYKGRVKQTLRNMWSLLTSVLSLHMPGAAVSLDNPESLKVPYGVALALTTLLFGIQKMRGR
Ga0187873_10805953	3300018013	Peatland	RNIGRLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGKLWGRS
Ga0187869_106035401	3300018030	Peatland	KRRFKETLRNMGRLLASIFSFRMPGPEVSLDNPKSLKIPYGVALALTTLLFAIARLWGRS
Ga0187867_104081932	3300018033	Peatland	SVFMAGIMALALVIYKRRFKETLRNMGRLLASIFSFRMPGLEVSLDNPKSLKIPYGVALALTTLLFGIGKLWGRS
Ga0187867_104081942	3300018033	Peatland	SVFMAGIMALALVIYKRRFKETLRNMGRLLASIFSFRMPGPEVSLDNPKSLKIPYGVALALTTLLFAIARLWGRS
Ga0187863_109081411	3300018034	Peatland	MALALVIYKRRFRQTVRNIGHMLASLLTFRLPSAEVSLDNPDSLKVPYGVAFALTTLIFGCGKAWGK
Ga0187855_104830041	3300018038	Peatland	ALALVIYKRRFKETLRNMGRLLASIFSFRMPGLEVSLDNPKSLKIPYGVALALTTLLFGIGKLWGRS
Ga0187890_100811421	3300018044	Peatland	VFMAGIMALALVIYKRRFKETLRNMGRLLASIFSFRMPGPEVSLDNPKSLKIPYGVALALTTLLFAIARLWGRS
Ga0187890_102960681	3300018044	Peatland	HLLIGSIFVAGIMAFALVIYKRRLMQTLRNIGRMLGFMLRFHMPGPEVSLDNPQSLKIPYGVALAFTTLCYGALNWRMWGVR
Ga0187851_104630202	3300018046	Peatland	SVFVAGIMALGLVIYKRRFRQTLRNMGRLLASMGTFHMPGPEVSLDNPQSLKIPYGVALALTTLLYGIGRFWGRP
Ga0187858_100447305	3300018057	Peatland	ETLRNIGRLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGRLWGRS
Ga0187858_103121754	3300018057	Peatland	MVSVFVAGIMALGLVIYKRRFKETLRNIGRLLASMLTFRMPGAEVSLDNPQSLKVPYGVALALTTVLFSIWKMWGAR
Ga0187858_104876082	3300018057	Peatland	ISVLVAGIMALALVIYKRRFKETLRNIGRLLVSMLSFRKPGFEVSLDNPQSLKIPKAVALALATVLYGIGKLRGGS
Ga0187770_111398522	3300018090	Tropical Peatland	VKETLRNIGRLLGSMLTFRMPGAEVSLDNPQSLKVPYGVALALTTLLFGIGKMWGGRWL
Ga0187770_111700572	3300018090	Tropical Peatland	LVIYKRRFMQTLRHIGRMLASLLTLHMPGAEVSLDNPQSLKVPYGVALALTTLCYGLLSWKMWGAR
Ga0182025_10053521	3300019786	Permafrost	WIDLCSRNHGPGGFVAGIMALGVVIYKRRLMETLRNIGRMLGSMLTFRMPGAEVSLDNPQSLKIPYGVALALTTLLYGILNWKMWGVG
Ga0210403_100062681	3300020580	Soil	RRFMQTLRNMGRLLASMLTFHMPGAEVSLDNPQSLKVPYGVALALTTLLFGIVKVWGAR
Ga0210399_112838342	3300020581	Soil	VLVAGVMALVLVIYKRRFKQTMRNIGHLLGSMFMLRRPGAEVSLDNPQSLKVPYGVALALTTLLFGAGKIWGAR
Ga0210396_103908391	3300021180	Soil	VIYKGRFGETMRNIGGMLAAMVSLRMPGAEVSLDNPKSLKVPYGVALALTTLVFGVGKIWGGR
Ga0210388_100677324	3300021181	Soil	TLRNIGRLLASMLTLRMPGAEVSLDNPQSLKVPYGVALALTTLLFGIGKMWGVR
Ga0210393_101207251	3300021401	Soil	IDLLVVSVFVAGIMALGLVIYKRRLKETLGNIGRLLGALLTFRMPAAEVSLDNPQSLKIPYGVALAVTTLGYAVGKLWGRL
Ga0210393_105261473	3300021401	Soil	SVFIAGVMALGLVIYKRRLGQTFRNIGRLLASMATFRMPDHEVSLDNPQSLKVPYGVALALAVVLFGIWNWKSLGAH
Ga0210386_114178232	3300021406	Soil	AGIMALGLVIYKRRLLETLRNIGRLLGSMLTFHMPGAEVSLDNPQSLKIPYGVALALTTVLYGILNWRMWGVR
Ga0210383_101341341	3300021407	Soil	RVKETLRNMGRLLGSMLAFRMPGPEVSLDNPQSLKVPYGVALALTTLLFAAGKMWGAR
Ga0210383_105772331	3300021407	Soil	MALGLVIYKRRLKQTFRNIGRLLVSMATFRMPDTEVSLDNPQSLKVPYGVALALTTVLYGIVNWKLFRAH
Ga0210394_103845621	3300021420	Soil	FKETMRNIGRLLASMLTFHRPGPEVSLDNPQSLKVPYGVALALTTVLFGIRKIWGA
Ga0210394_108505041	3300021420	Soil	MRNIGGMLAAMVSLRMPGAEVSLDNPKSLKVPYGVALALTTLVFGVGKIWGGR
Ga0210384_104106261	3300021432	Soil	NIGRLLASMATFRMPDHEVSLDNPQSLKVPYGVALALAVVLFGIWNWKSLGAH
Ga0210391_105474361	3300021433	Soil	KETLGNIGRLLGALLTFRMPAAEVSLDNPQSLKIPYGVALAVTTLGYAVGKLWGRL
Ga0210391_107341381	3300021433	Soil	VIYKRRLGETLRNIGHMLGSMARLHMPGQEVSLDNPQSLKVPYGVALALSTLLYGALKWKLRGVQ
Ga0187846_101795571	3300021476	Biofilm	VIYKRRFKQTLGNIGRLLRSMITFHMPGTEVSLDNPQSLKVPYGVALALTTFLYGAWQFGQQMKTRGGG
Ga0210402_103440151	3300021478	Soil	QETLRNIWRLLGAMLTVRMPSAEVTLDNPQSLRVPYGVALALTTLLLGIRTMWGAR
Ga0210410_100251981	3300021479	Soil	VIYKRRFKETLRNIARLLASMSSLRMPGAEVSLDNPQSLKVPYGVALALTTLLFGIGKMWGAR
Ga0210409_104293852	3300021559	Soil	MVSIFIAGVMALGLVIYKRRLGQTFRNIGRLLASMATFRMPDAEVSLDNPESLKVPYGVALALTTVLYGIVNWKSLGAH
Ga0242666_10259383	3300022721	Soil	YKRRFKQTMRNIWNMLGSMATFHMPGTEVSLDNPESLKVPYGVALALTTVLFAAGTMWGR
Ga0224571_1124881	3300022734	Rhizosphere	MKETLRNIGRLLASMFTFHMPGAEVSLDNPQSLKIPYGVALALTTLLYGVWNWKMGGAR
Ga0224561_10280432	3300023030	Soil	TLRNIGRLLASMFTFRMPGPEVSLDNPQSLKIPYGVALALTTLLYGVWNWKMGAAR
Ga0228598_10145661	3300024227	Rhizosphere	YKRRFKQTLRNIGRLLASMLTFRMPGPEVSLDNPQSLKVPYGVALALSTLLFGIGKMWGT
Ga0208689_10226694	3300025459	Peatland	VIYKRRFRETLRNIGRLLASLLTFRMPGPEVSLDNPQSLKIPYGVALALTTLLFGIGRLWGRS
Ga0208488_10531842	3300027110	Forest Soil	ETLRNIGRLLLSMLTLRMPGAEVSLENPQSLKVPYGVALALTTLLFGVGKIWGTNIWGAR
Ga0209222_11207901	3300027559	Forest Soil	MALGLVIYKRRVMQTLRNIGRLLASMFTFHMPGAEVSLDNPQSLKIPYGVALALTTLLYGVWNWKMGGAR
Ga0209420_10564683	3300027648	Forest Soil	KQRFIQTMRNIGGLLASMVTLHRPGPEVSLDNPQSLKIPYGVALALTTLLFGIGKLRGTL
Ga0209420_11975232	3300027648	Forest Soil	LGLIIYKRRLGETLRNIVHLVASLLSLQMPGPEVSLDNPRSLKVPYGVALALTVVAYGVGYIWSAA
Ga0209038_102635781	3300027737	Bog Forest Soil	GLVIYKRRFKETMRNIGRLLASMLTLRMPGAEVSLDNPQSLKVPYGVALALTTVLFGIGKIWGAR
Ga0209908_100876161	3300027745	Thawing Permafrost	LVIYKRRLKQTLRNMGRLLASLFTFHMPGSEVSLDNPQSLKIPYGVALALTTLLYGVWNWKMGGPR
Ga0209274_100046201	3300027853	Soil	IMALALVIYKRRFKETMRNIGGLLASIVTFHKPGAEVSLDNPQSLKVPYGVALALTTLLFSIGKMWGAR
Ga0209693_104771001	3300027855	Soil	LMALGLIVYKRRFGETMRNLAHLVASLLSLRMPGPEVSLDNPRSLKVPYGVALALTVVAYGAGHMWGAG
Ga0209283_108818371	3300027875	Vadose Zone Soil	YKRRFKQTLRNIGGMLASMLTFRMPAAEVSLDNPESLKVPYGVALAFTTLLFGVGKLWGA
Ga0209380_102957933	3300027889	Soil	FVGWQVLLNLLFWSVFVAGVMALGLVIYKRRLVETLRNIGRLLASMLTFHMPGAEVSLDNPQSLKVPYGVALALTTLLFGIGKMWGAR
Ga0302233_100472561	3300028746	Palsa	SVFVAGVMALALVIYKRRFLQTLRNIGGILVSMVTFHKPSPEVSLDNPQSLKVPYGVALALTTVLFGVHSIWRT
Ga0302224_101062101	3300028759	Palsa	FVAGVMALALVIYKRRFLQTLRNIGGILVSMVTFHKPSPEVSLDNPQSLKVPYGVALALTTVLFGVHSIWRT
Ga0302234_103762351	3300028773	Palsa	RRVKETLRNMGRMLASMLTFHMPGPEVSLDNPESLKVPYGVALALTTLLYGILNLKMWGA
Ga0302228_101796333	3300028808	Palsa	KETLRNMGRMLASMLTFHMPGPEVSLDNPESLKVPYGVALALTTLLYGILNLKMWGAR
Ga0302278_101498833	3300028866	Bog	TLRNIGRLLASMFTFHMPDAEVSLDNPRSLKIPYGVALAVATLLYGVWNWKMGGAR
Ga0302278_101750283	3300028866	Bog	LRNMGRLVGSMLTLHMPGTEVSLDNPESLKVPYGVALALTTLFYGAAITWGAR
Ga0302154_101628933	3300028882	Bog	YKRRFLQTLRNMGRLVGSMLTLHMPGTEVSLDNPESLKVPYGVALALTTLFYGAAITWGA
Ga0308309_103314473	3300028906	Soil	LVAGIMTLVLVIYKRRFKETLRNIGKLLLSMVTFRMPGAEVSLDNPQSLKVPYGVALALTTLLFGIEKMWRAR
Ga0311326_100896101	3300029917	Bog	VAGVMALALVIYKRRFLQTLRNIGGILVSMVTFHKPSPEVSLDNPQSLKVPYGVALALTTLLFGIHSIWRP
Ga0311328_106147622	3300029939	Bog	GLVIYKRRVKETLRNIGRLLASMFTFHMPDAEVSLDNPRSLKIPYGVALAVATLLYGVWNWKMGGAR
Ga0311340_111104062	3300029943	Palsa	LMLSVLVAGVMAIALVIYKRRLGQTLHNIGHLLRSLLTFRMPAAEVTLDNPQSLKVPYGVALALAVVLYGIRYAGGGR
Ga0311371_106080971	3300029951	Palsa	LVIYKGRFRQTMRNIGRLLASMLAFRMPDAEVSLDNPQSLKVPYGVALALTTVLYSVWAWKMRGAH
Ga0302179_100550681	3300030058	Palsa	GRLLASMLAFRMPDAEVSLDNPQSLKVPYGVALALTTVLYSVWAWKMRGAH
Ga0302192_102183691	3300030507	Bog	VKETLRNIGRLLASMFTFHMPDAEVSLDNPRSLKIPYGVALAVATLLYGVWNWKMGGAR
Ga0302183_100706611	3300030509	Palsa	ETLRNIGRMLGSMFTFRMPGAEVSLDNPQSLKIPYGVALAITTLLYGVLSWKMGGAR
Ga0302183_103866512	3300030509	Palsa	LGNIGRLLGSMVTFHMPAPEVSLDNPQSLKVPYGVALALTTVLFGIRRIWGA
Ga0210277_104748751	3300030528	Soil	RRFLQTLCNVGRLLASMLTFRMPGPEVSLDNPQSLKIPYGVALAVTTLGYGVGKLWG
Ga0302310_103686431	3300030737	Palsa	ALALVIYKRRFLQTLRNIGGILVSMVTFHKPSPEVSLDNPQSLKVPYGVALALTTVLFGVHSIWRT
Ga0265461_118296701	3300030743	Soil	IGRLLGSMVTFHMPAPEVSLDNPQSLKVPYGVALALTTLLFSLGKIWGAR
Ga0265750_10116283	3300030813	Soil	LSLLVGSVFMAGVMALALVIYKRRFRQTLRNIGHMLASLLTFRMPSAEVSLDNPESLKVPYGVALALTALIFGVARGWRK
Ga0302180_103185061	3300031028	Palsa	FKQTLGNIGRLLGSMVTFHMPAPEVSLDNPQSLKVPYGVALALTTVLFGIRRIWGA
Ga0302325_101280871	3300031234	Palsa	VGPGALIDLLMGSIFMAGIMALALVIYKGRFRQTMRNIGRLLASMLAFRMPDAEVSLDNPQSLKVPYGVALALTTVLYSVWAWKMRGAH
Ga0302325_114190871	3300031234	Palsa	RRVGETMRNIANMVGSLLSLQMPGAEVSLDNPRSLKVPYGVALALTVVAYGAGHIWRAA
Ga0302324_1001298171	3300031236	Palsa	VMAIALVIYKRRLGQTLHNIGHLLRSLLTFRMPAAEVTLDNPQSLKVPYGVALALAVVLYGIRYAGGGR
Ga0310686_1029344653	3300031708	Soil	FMAGVMDLALVIYKRRFRQTLRNIRHMLASLLTFRMPSAEVSLDNPESLKVPYGVALALTALIFGVARGWRK
Ga0310686_1126863331	3300031708	Soil	IVGPGALLDLLMGSIFVAGVMALVLIIYKRRVRETFRNIGRMLRSMLTFRMPGAEVSLDNPQSLKIPYGVALALTALLFGIGKLAGRL
Ga0310686_1158754022	3300031708	Soil	VMALGLVIYKRRLGQTFRNIGRLLASMATFRMPDHEVSLDNPQSLKVPYGVALALAVVLFGIWNWKSLGAH
Ga0307476_100376455	3300031715	Hardwood Forest Soil	RNIGRMLKSMLMFHMPGAEVSLDNPQSLKIPYGVALALTTLLFGVGKLAGRF
Ga0307474_102531851	3300031718	Hardwood Forest Soil	AGIMALGLVIYKRRFKETMRNIGKICSSLIMFRMPAAEVSLDNPQSLKVPYGVALALMTVFFGIGKIWGAR
Ga0307474_103529343	3300031718	Hardwood Forest Soil	IYKRRFKETVRNIGRLLGSMFMFRMPGAEVSLDNPQSLKVPYGVALALTTLLFGIGKMWGARP
Ga0311301_110929701	3300032160	Peatlands Soil	GRFKETLRNIGRLLASMLTLRMPGNEVSLDNPESLKVPYGVALALTTFLFGIEKMWGAR
Ga0307470_109477181	3300032174	Hardwood Forest Soil	TMRNIGGLLGSLILFRMPGTEVSLDNPQSLKVPYGVALALTTLVFGIGKMWGARP
Ga0348332_117031112	3300032515	Plant Litter	AFVGPGVLIDLLVVSVFVAGIMALGLVIYKRRLKETLRNIGRLLGSLLTFRMPAAEVSLDNPQSLKIPYGVALAVTTLGYGVGKLWG
Ga0348332_124709764	3300032515	Plant Litter	LVIYKRRLGETLRNIGRMLRSMARLHMPGPEVSLDNPQSLKVPYGVALALTTLLYGALNWKMWGVR
Ga0335072_1002131010	3300032898	Soil	RNMGHLLASLFTFHMPGPEVSLDNPDSLKIPYGVALALSVVLYGVRQMWGAG
Ga0334854_112397_3_185	3300033829	Soil	YKRRFKQTLRNIGRLLASMLMFHMPGPEVSLDNPQSLKVPYGVALALTTVLFGIGRIWGA
Ga0334854_147134_5_229	3300033829	Soil	VAGIMALGLVIYKRRLMETLRNIGRMLRSMLTFHMPGAEVSLDNPQSLKVPYGVALALTTLLYAILNWKMWGVG
Ga0334854_148139_4_162	3300033829	Soil	MHNIGRLLASMLMFHMPGPEVSLDNPQSLKVPYGVALALTTVLFGIGRIWGA
Ga0334792_113840_8_166	3300033888	Soil	MGKMLGSMLTFRMPGAEVSLDNPESLKVPYGVALALTMLLYSIFNYKMWGAR
Ga0370515_0112722_20_190	3300034163	Untreated Peat Soil	MQTLRNMGRLVGSMLTLHMPGAEVSLDNPESLKVPYGVALGLTTLLFVAGKVWGER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073292

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences