Metagenome Family F072730

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072730
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	55 residues
Representative Sequence	MSALIGRLLQLSGMIILPIGLMYGFGRGEIRTEVKLLALGGFLFVLGWILSRERR
Number of Associated Samples	97
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.98 %
% of genes near scaffold ends (potentially truncated)	15.70 %
% of genes from short scaffolds (< 2000 bps)	68.60 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.347 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.703 % of family members)
Environment Ontology (ENVO)	Unclassified (33.058 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.83% β-sheet: 0.00% Coil/Unstructured: 42.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.63.1.1: Claudin	d3jbre_	3jbr	0.85629
a.25.1.1: Ferritin	d1z6oa1	1z6o	0.84267
a.24.9.1: alpha-catenin/vinculin	d3rf3a1	3rf3	0.83406
f.63.1.1: Claudin	d4p79a1	4p79	0.81721
a.25.1.2: Ribonucleotide reductase-like	d2uw1a_	2uw1	0.80616

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00160	Pro_isomerase	19.83
PF00389	2-Hacid_dh	17.36
PF02826	2-Hacid_dh_C	8.26
PF13646	HEAT_2	4.96
PF13517	FG-GAP_3	4.13
PF00005	ABC_tran	3.31
PF01061	ABC2_membrane	2.48
PF13442	Cytochrome_CBB3	2.48
PF01578	Cytochrom_C_asm	1.65
PF00171	Aldedh	1.65
PF00857	Isochorismatase	1.65
PF00072	Response_reg	1.65
PF03144	GTP_EFTU_D2	0.83
PF00085	Thioredoxin	0.83
PF03450	CO_deh_flav_C	0.83
PF01548	DEDD_Tnp_IS110	0.83
PF08241	Methyltransf_11	0.83
PF12838	Fer4_7	0.83
PF13692	Glyco_trans_1_4	0.83
PF16327	CcmF_C	0.83
PF03544	TonB_C	0.83
PF13091	PLDc_2	0.83
PF00120	Gln-synt_C	0.83
PF02585	PIG-L	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	19.83
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.65
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.65
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.65
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.65
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.65
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.83
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %
Unclassified	root	N/A	1.65 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	34.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.65 %
Unclassified	root	N/A	1.65 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.65 %
Unclassified	root	N/A	1.65 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.65 %
Unclassified	root	N/A	1.65 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.71 %
Unclassified	root	N/A	1.65 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.83 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.71 %
Unclassified	root	N/A	1.65 %
Vulgatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae	0.83 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.71 %
Unclassified	root	N/A	1.65 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.83 %
Vulgatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae → Vulgatibacter	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.71 %
Unclassified	root	N/A	1.65 %
Vulgatibacter incomptus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae → Vulgatibacter → Vulgatibacter incomptus	0.83 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_114912686	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300003315\|P22013IDBA_10003416	All Organisms → cellular organisms → Bacteria	9891	Open in IMG/M
3300004156\|Ga0062589_102210719	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300004463\|Ga0063356_100673316	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300004643\|Ga0062591_102545909	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005294\|Ga0065705_10497223	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005334\|Ga0068869_100506995	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005336\|Ga0070680_100007685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8225	Open in IMG/M
3300005340\|Ga0070689_100244126	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300005340\|Ga0070689_100711751	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005340\|Ga0070689_101033253	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005354\|Ga0070675_100000007	All Organisms → cellular organisms → Bacteria	263394	Open in IMG/M
3300005356\|Ga0070674_101886156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300005441\|Ga0070700_100000050	All Organisms → cellular organisms → Bacteria	88421	Open in IMG/M
3300005518\|Ga0070699_100672912	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005615\|Ga0070702_100037361	All Organisms → cellular organisms → Bacteria	2697	Open in IMG/M
3300005617\|Ga0068859_101017934	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300005719\|Ga0068861_101672946	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005836\|Ga0074470_11310513	All Organisms → cellular organisms → Bacteria	24895	Open in IMG/M
3300005840\|Ga0068870_10197617	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300006031\|Ga0066651_10000096	All Organisms → cellular organisms → Bacteria	25554	Open in IMG/M
3300006169\|Ga0082029_1096919	All Organisms → cellular organisms → Bacteria → Proteobacteria	6451	Open in IMG/M
3300006169\|Ga0082029_1555646	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300006196\|Ga0075422_10051856	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300006844\|Ga0075428_100010975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	10075	Open in IMG/M
3300006844\|Ga0075428_100390461	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300006844\|Ga0075428_100402797	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300006845\|Ga0075421_100000254	All Organisms → cellular organisms → Bacteria	51724	Open in IMG/M
3300006845\|Ga0075421_100318346	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300006854\|Ga0075425_100006023	All Organisms → cellular organisms → Bacteria	12655	Open in IMG/M
3300006871\|Ga0075434_100360998	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300006871\|Ga0075434_101281938	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300006871\|Ga0075434_102189095	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006876\|Ga0079217_10266280	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300006876\|Ga0079217_11120568	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300006903\|Ga0075426_11570774	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006918\|Ga0079216_10317345	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300006969\|Ga0075419_10310288	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300007004\|Ga0079218_12681595	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300007004\|Ga0079218_13771106	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300009036\|Ga0105244_10083192	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300009100\|Ga0075418_10613310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300009100\|Ga0075418_10967135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300009147\|Ga0114129_12174543	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300009147\|Ga0114129_12950027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300009176\|Ga0105242_10012853	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Vulgatibacteraceae → Vulgatibacter → Vulgatibacter incomptus	6450	Open in IMG/M
3300010039\|Ga0126309_10605563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300010042\|Ga0126314_10685975	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010044\|Ga0126310_10003649	All Organisms → cellular organisms → Bacteria	6427	Open in IMG/M
3300010044\|Ga0126310_11501723	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010045\|Ga0126311_10222667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1387	Open in IMG/M
3300010045\|Ga0126311_10432701	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300010399\|Ga0134127_10449908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1287	Open in IMG/M
3300010399\|Ga0134127_11112410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300010403\|Ga0134123_10024276	All Organisms → cellular organisms → Bacteria	4333	Open in IMG/M
3300010403\|Ga0134123_12198053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300011427\|Ga0137448_1016018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1669	Open in IMG/M
3300012040\|Ga0137461_1028217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300012668\|Ga0157216_10234943	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012680\|Ga0136612_10013643	All Organisms → cellular organisms → Bacteria	4034	Open in IMG/M
3300012680\|Ga0136612_10140695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300012912\|Ga0157306_10196682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300014487\|Ga0182000_10211247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300014745\|Ga0157377_10647234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300014870\|Ga0180080_1020749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300014877\|Ga0180074_1023221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300017965\|Ga0190266_10795169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300018429\|Ga0190272_10000017	All Organisms → cellular organisms → Bacteria	153992	Open in IMG/M
3300018429\|Ga0190272_10314770	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300018432\|Ga0190275_10001923	All Organisms → cellular organisms → Bacteria	15148	Open in IMG/M
3300018465\|Ga0190269_10162052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300018466\|Ga0190268_10118517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300018466\|Ga0190268_11136582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300018469\|Ga0190270_10000024	All Organisms → cellular organisms → Bacteria	109663	Open in IMG/M
3300018469\|Ga0190270_10661564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300018469\|Ga0190270_12159691	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018906\|Ga0193609_1134622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300019377\|Ga0190264_11419322	Not Available	596	Open in IMG/M
3300019767\|Ga0190267_10057039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1371	Open in IMG/M
3300020131\|Ga0196972_1056238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300020146\|Ga0196977_1000719	All Organisms → cellular organisms → Bacteria	15588	Open in IMG/M
3300020147\|Ga0196976_1000045	All Organisms → cellular organisms → Bacteria	81395	Open in IMG/M
3300020154\|Ga0196965_1051265	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300020202\|Ga0196964_10013300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3426	Open in IMG/M
3300020202\|Ga0196964_10637670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300020215\|Ga0196963_10442706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300021067\|Ga0196978_1010106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1824	Open in IMG/M
3300021290\|Ga0213902_100898	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300021339\|Ga0193706_1020760	All Organisms → cellular organisms → Bacteria	2053	Open in IMG/M
3300021968\|Ga0193698_1002957	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300022901\|Ga0247788_1037548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300024426\|Ga0196960_10014368	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300025159\|Ga0209619_10479650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300025728\|Ga0207655_1064103	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300025917\|Ga0207660_10005667	All Organisms → cellular organisms → Bacteria	8102	Open in IMG/M
3300025926\|Ga0207659_10000036	All Organisms → cellular organisms → Bacteria	103327	Open in IMG/M
3300025936\|Ga0207670_10202292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1510	Open in IMG/M
3300025942\|Ga0207689_10782662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300026075\|Ga0207708_10000041	All Organisms → cellular organisms → Bacteria	126142	Open in IMG/M
3300026306\|Ga0209468_1000022	All Organisms → cellular organisms → Bacteria	90340	Open in IMG/M
3300027075\|Ga0214467_1012241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300027886\|Ga0209486_11034762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300027907\|Ga0207428_10000030	All Organisms → cellular organisms → Bacteria	240846	Open in IMG/M
3300027909\|Ga0209382_10001086	All Organisms → cellular organisms → Bacteria	43629	Open in IMG/M
3300027909\|Ga0209382_10182718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2412	Open in IMG/M
3300028578\|Ga0272482_10220666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300028714\|Ga0307309_10214915	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300030510\|Ga0268243_1122113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300031164\|Ga0307502_10008456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1908	Open in IMG/M
3300031455\|Ga0307505_10000495	All Organisms → cellular organisms → Bacteria	43084	Open in IMG/M
3300031740\|Ga0307468_101604184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300031944\|Ga0310884_10878150	Not Available	552	Open in IMG/M
3300032002\|Ga0307416_101042592	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300032126\|Ga0307415_102164875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300034008\|Ga0334942_000047	All Organisms → cellular organisms → Bacteria	67861	Open in IMG/M
3300034027\|Ga0334949_013818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2496	Open in IMG/M
3300034145\|Ga0334963_000040	All Organisms → cellular organisms → Bacteria	109410	Open in IMG/M
3300034377\|Ga0334931_058275	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300034760\|Ga0334948_002330	All Organisms → cellular organisms → Bacteria	6541	Open in IMG/M
3300034760\|Ga0334948_002883	All Organisms → cellular organisms → Bacteria	5713	Open in IMG/M
3300034781\|Ga0334935_000515	All Organisms → cellular organisms → Bacteria	16557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.90%
Host-Associated	Host-Associated	28.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.12%
Plants	Host-Associated → Plants	28.10%
Aquatic	Environmental → Aquatic	5.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.96%
Sediment	Environmental → Aquatic → Sediment	4.13%
Freshwater	Environmental → Aquatic → Freshwater	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.66%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Sand	Environmental → Terrestrial → Soil → Sand	8.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.13%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	2.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.48%
Ice	Environmental → Aquatic → Freshwater → Ice	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	8.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.13%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.48%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.70%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	7.44%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.31%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.48%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.65%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018906	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020131	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20-13C	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300020154	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300021290	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_2	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025728	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1149126862	3300000956	Soil	MGATIGRLLQITGMIVLPIGLLYGLVRGEIRTEVQLLALGGFLYVLGWILARDRR*
P22013IDBA_100034162	3300003315	Ore Pile And Mine Drainage Contaminated Soil	MTPLFGRLLQLAGMIILPIGLMYGLGRGDIRTEVKLLALGGFLFVLGWILGREKSS*
Ga0062589_1022107191	3300004156	Soil	MSATIGRLLQLIGMIILPIGLAYGLVKNEIRIEVQLLALGGFLFVLGWILSKRTS*
Ga0063356_1006733162	3300004463	Arabidopsis Thaliana Rhizosphere	MAALIGRLLQLAGMIILPIGLLYGLGRDDVRTEVRLLAIGGFCFVLGWLLSKKND*
Ga0062591_1025459092	3300004643	Soil	MSATLGRLFQLIGMILLPIGLSYGLLKDNIRVEVQLLALGGFLFVLGWILSRKQS*
Ga0065705_104972231	3300005294	Switchgrass Rhizosphere	MNATIGRLLQLIGMLLLPIGLMYGLVRNEIRTEVQLLALGGFLFVLGWILSRDRRG*
Ga0068869_1005069952	3300005334	Miscanthus Rhizosphere	MSATLGRLFQLIGMILLPIGLSYGLLKDDIRVEVQLLFLGGFLFLLGWILSRKR*
Ga0070680_1000076857	3300005336	Corn Rhizosphere	MTATLGRLLQLIGMILLPIGLSYGLLKDNIRVEVQLLFIGGFLFLLGWILARKRE*
Ga0070689_1002441262	3300005340	Switchgrass Rhizosphere	MQMIGMILLPIGLSYGLLKDNIRMEVQLLAVGGFLFVLGWILSRRN*
Ga0070689_1007117512	3300005340	Switchgrass Rhizosphere	MTAVAGRLLQLVGMIVLPIGLSYGLLRDDIKTEVRLLAIGGFCFVLGWILSRERK*
Ga0070689_1010332532	3300005340	Switchgrass Rhizosphere	MNALVGRLLQLTGMIVLPIGLMYGLGRGDIKTEVRLLAIGGFCFVLGWILSRERK*
Ga0070675_100000007222	3300005354	Miscanthus Rhizosphere	MSATLGRLFQLIGMILLPIGLSYGLLKDDIRVEVQLLFLGGFLFLLGWILSRQR*
Ga0070674_1018861562	3300005356	Miscanthus Rhizosphere	MSALTGRVLQLVAMILLPIGLMYGLAQDDIRTEVRLLAVGGFLFVLGWILSRERK*
Ga0070700_10000005058	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSATVGRLLQLIGMIILPIGLAYGLMKNEIRVEVQLLALGGFLFVLGWILQKRTS*
Ga0070699_1006729122	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSATIGRLLQLIGMIILPIGLSYGLLKNEIRLEVQLLALGGFLFVLGWILAKRTN*
Ga0070702_1000373611	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PGEGRTMSALLGRLFQLIGLIVLPIGLSYGLLKDNIRVEVQLLGIGGFLFLLGWILSRNKQ*
Ga0068859_1010179341	3300005617	Switchgrass Rhizosphere	MSATLGRLFQLIGMILLPIGLSYGLLEDNIRVEVQLLALGGFLFVLGWILSRRQ
Ga0068861_1016729462	3300005719	Switchgrass Rhizosphere	MTATLGRLLQLIGMILLPIGLSYGLLKDNIRVEVQLLFIGGFLFLL
Ga0074470_1131051327	3300005836	Sediment (Intertidal)	VSAALGRLMQLAGLIVLPIGLSYGLLRDDIKTEVRLLAIGGFLFLLGWILSRERR*
Ga0068870_101976171	3300005840	Miscanthus Rhizosphere	LQLVGLIVLPIGLSYGLLKDNIRVEVQLLALGGFLFTLGWILSRKQQ*
Ga0066651_100000968	3300006031	Soil	MSALLGRLFQLIGLIVLPIGLSYGLLRDNIRVEVQLLGIGGFLFLLGWILSRKAN*
Ga0082029_10969197	3300006169	Termite Nest	MATTIGRLMQLVALVLLPIALSYGMVSGEVRAEVMLLALGGFLFLLGRIIAREK*
Ga0082029_15556462	3300006169	Termite Nest	MTPLLGRLLQLSAMIILPIGLLYGLGKNDIQTEVKLLALGGFLFVLGWILSREKKA*
Ga0075422_100518562	3300006196	Populus Rhizosphere	MSALIGRLLQLSGMIILPIGLLYGFGRGQIRTEVQLLALGGFLFVLGWILARERR*
Ga0075428_10001097511	3300006844	Populus Rhizosphere	LGPLIGRLLQLAGMIVLPIGLSYGLLRDDIKTEVRLLAIGGFLFVLGWIVSRERK*
Ga0075428_1003904613	3300006844	Populus Rhizosphere	VSALIGRLLQLSGMIILPIGLMYGFGRGEIRTEVQLLALGGFLFVLGWILARERR*
Ga0075428_1004027972	3300006844	Populus Rhizosphere	MSPLLGRLLQLCAMIILPIGLIDGLGKGDIATEVRLLAIGGFLFTLGWILGREKRS*
Ga0075421_10000025421	3300006845	Populus Rhizosphere	MSPLIGRLLQVSAMIILPIGLIYGLGYGDIRTEVKLLALGGFLFVLGWILAREKSA*
Ga0075421_1003183464	3300006845	Populus Rhizosphere	GSDLGPLIGRLLQLAAMIVLPIGLSYGLLRDDIQTEVRLLAIGGFLFVLGWILARERK*
Ga0075425_10000602315	3300006854	Populus Rhizosphere	MSALIGRWLQVIGMIVLPIGLLYGLVRDDIKTEVRMLAFGGFVYVLGWILSREKR*
Ga0075434_1003609982	3300006871	Populus Rhizosphere	MSALLGRLFQLIGLIVLPIGLSYGLLRDNIRVEVQLLGIGGFLFLLGWILARKTN*
Ga0075434_1012819382	3300006871	Populus Rhizosphere	MSATLGRLFQLIGLIVLPIGLSYGLIKDNIRVEVQLLAIGGFLFVLGWILARKTN*
Ga0075434_1021890952	3300006871	Populus Rhizosphere	MSALLGRLFQLIGLIVLPIGLSYGLLRDNIRVEVQLLGIGGFLFLLGWILARKTTN*
Ga0079217_102662802	3300006876	Agricultural Soil	MSATIGRLLQVSGMIILPIGLSYGLLKGDIRVEVQLLALGGFLYVLGWILARKR*
Ga0079217_111205682	3300006876	Agricultural Soil	MSPTIGRLMQLAGMIILPIGLMYGLGRGDIRTEVKLLALGGFLFVLGWILSRERSS*
Ga0075426_115707742	3300006903	Populus Rhizosphere	MSALLGRLFQLIGLIVLPIGLSYGLLKDNIRVEVQLLGIGGFLFLLGWILARKAN*
Ga0079216_103173452	3300006918	Agricultural Soil	VSALFGRLLQLSALVLLPIALSYGLVKGDVRTEVKLLAIGGFLFILGRILSREQR*
Ga0075419_103102882	3300006969	Populus Rhizosphere	MSPLIGRLLQVSAMIILPIGLTYGLGYGDIRTEVKLLALGGFLFVLGWILAREKSA*
Ga0079218_126815953	3300007004	Agricultural Soil	MSATIGRLLQLIGMIILPIGLAYGLVMNEIRTEVQLLALGGFLFVLGWILSKRAN*
Ga0079218_137711061	3300007004	Agricultural Soil	VSVLIGRLLQLSGMIILPIGLMYGFGRGEIRTEVQLLALGGFLFVLGWILARERR*
Ga0105244_100831921	3300009036	Miscanthus Rhizosphere	PGDRREAMSATLGRLFQLIGMILLPIGLSYGLLKDDIRVEVQLLFLGGFLFLLGWILSRQR*
Ga0075418_106133101	3300009100	Populus Rhizosphere	MSPLLGRLLQLCAMIILPIGLIYGLGKGDIATEVRLLAIGGFLFTLGWILGREKRS*
Ga0075418_109671352	3300009100	Populus Rhizosphere	MSAILGRLFQLIGLILLPIGLSYGLIKDNIRVEVQLLAIGGFLFLLGWILARNK*
Ga0114129_121745432	3300009147	Populus Rhizosphere	MTATIGRLLQLIGMIVLPIGLSYGLLKDNIRVEMQLLALGGFLFALGWILSRKAN*
Ga0114129_129500272	3300009147	Populus Rhizosphere	MVGLIVLPIGLSYGLIKNNIRVEVQLLAIGGFLFLLGWILTRKAQ*
Ga0105242_100128538	3300009176	Miscanthus Rhizosphere	MRATLGRLLQVIGMILLPIGLSYGLLKDNIRVEVQLLFIGGFLFVLGWLFSRERR*
Ga0126309_106055631	3300010039	Serpentine Soil	MRALVGRWMQVIGMIVLPIGLMYGLVRNEIRTEVKLLALGGFLFVLGWILSR
Ga0126314_106859752	3300010042	Serpentine Soil	MSPLIGRLLQVSAMILLPIGLLYGLGRGDIRTEVQLLGLGGFLFVLGWILARERKP*
Ga0126310_100036495	3300010044	Serpentine Soil	MSATIGRLLQLIGMIVLPIGLSYGLIRDNIRVEVQLLAIGGFLFVLGWILSRAQK*
Ga0126310_115017231	3300010044	Serpentine Soil	MSATIGRLLQLIGMIVLPIGLMYGLVMGEIQTEVRLLAIGGFLFVAGWLLARKSE*
Ga0126311_102226672	3300010045	Serpentine Soil	MTPLIARLLQLSGMIVLPIGLMYGLGRGDIKTEVRLLALGGFLFVLGWILGREKNA*
Ga0126311_104327012	3300010045	Serpentine Soil	VTPLIGRLLQLAGMIVLPIGLSYGLLRDDIKTEVRLLAIGGFLFVLGWIISRERR*
Ga0134127_104499082	3300010399	Terrestrial Soil	MSALLGRLLQLVGLIVLPIGLSYGLLKDNIRVEVQLLALGGFLFTLGWILSRK
Ga0134127_111124102	3300010399	Terrestrial Soil	VSALIGRLLQLSGMIILPIGLMYGFGRGEIRTEVQLLALGGFLFVLGWIMARERR*
Ga0134123_100242764	3300010403	Terrestrial Soil	MSATLGRLLQLIGMIILPIGLAYGLLKNEIRVEVQLLALGGFLFVLGWILSRRR*
Ga0134123_121980532	3300010403	Terrestrial Soil	MSATIGRLLQLIGMIILPIGLAYGLVKNEIRIEVQLLALGGFLFVLGWILSKRTN*
Ga0137448_10160182	3300011427	Soil	MNTLIGRILQLVGMIVLPIGLMYVLVRGEIRTEVQLLALGGFLFVLGWILAREQK*
Ga0137461_10282172	3300012040	Soil	MNTLIGRILQLVGMIVLPIALMYGLVRGEIRTEVQLLALGGFLFVLGWILARERK*
Ga0157216_102349432	3300012668	Glacier Forefield Soil	MQLSGMILLPIGLLYGFGRGDIRTEVKLLAVGGFLFVLGWILAREKH*
Ga0136612_100136433	3300012680	Polar Desert Sand	MAQAGRLFQLAGMIILPIGLYIGLVQDNVRLEVKLLAIGGFLFLLGWIMSREVE*
Ga0136612_101406951	3300012680	Polar Desert Sand	VNLFGRVLQFAGMIILPIGLSIGLFQGDVKMEVRYLAVGAFLFLLGRILTRKTA*
Ga0157306_101966822	3300012912	Soil	LSALIGRLLQLSGMIVLPIGLMYGFGRGDIRTEVRLLAIGGFLYVLGWILAREKS*
Ga0182000_102112472	3300014487	Soil	VSALAGRLLQLVGLIVLPIGLSYGLLRDDIKTEVRLLAVGGFLFVLGWILSRERK*
Ga0157377_106472342	3300014745	Miscanthus Rhizosphere	MSILVGRLLQLVGLIVLPIGLSYGLVKGEIRTEVQLLALGGFLFVLGWILTRERR*
Ga0180080_10207493	3300014870	Soil	GPDEGLRNMSVLIGRLMQVTGMIILPIGLLYGLARDDIRAEVRLLALGGFLFVLGWILARERK*
Ga0180074_10232211	3300014877	Soil	VSPLIGRLLQVSGMIILPIGLLYGLGYGDIRTEVKLLALGGFLFVLGWILAREKKA*
Ga0190266_107951691	3300017965	Soil	MSALIGRLLQLSGMIILPIGLMYGFGRGEIRTEVKLLALGGFLFVLGWILSRERR
Ga0190272_10000017102	3300018429	Soil	MSPFIGRLMQLSGMIILPIGLLYGLGRGDIRTEVKLLALGGFLFVLGWILSRERSS
Ga0190272_103147702	3300018429	Soil	MSATIGRLLQIAGMVILPIALLYGLVLGEIRTEVKLLALGGFLYVLGWILARDRA
Ga0190275_1000192310	3300018432	Soil	MNVAIGRLMQLVAMVLLPVGLSYGLVSGNVRHEVGILALGGFLFILGRIVARETKS
Ga0190269_101620522	3300018465	Soil	GRLLQLAGLIILPIGLSYGLVQGEIRTEVKLLALGGFLFVLGWILARERS
Ga0190268_101185172	3300018466	Soil	MSPTIGRLMQLAGMIILPIGLMYGLGRGDIRTEVKLLALGGFLFVLGWILSRERSS
Ga0190268_111365822	3300018466	Soil	MSILVGRLLQLVGLIILPIGLSYGLVKGEIRTEVQLLALGGFLFVLGWILARDRR
Ga0190270_1000002474	3300018469	Soil	MSVLIGRLLQLAGMIILPIGLSYGLIAGEIRTEVKLLALGGFPFVLGWILSRKTT
Ga0190270_106615642	3300018469	Soil	MTVLIGRLLQLCGMILLPIGLMYGLVKDEIRTEVCLLAIGGFLYVLGWILARKRE
Ga0190270_121596912	3300018469	Soil	MSALIGRLLQLSGMIILPIGLLYGFGRGEIRTEVQLLALGGFLFVLGWILAREKS
Ga0193609_11346222	3300018906	Soil	MAPLIGRLLQLSGMILLPIGLMYGLVGGDIRTEVRLLFIGGFVYLLGWIIARKR
Ga0190264_114193222	3300019377	Soil	LQLAGMIILPIGLSYGLIQGEIRTEVKLLALGGFLFVLGWILSRERR
Ga0190267_100570392	3300019767	Soil	MSVLIGRLLQLAGMIILPIGLSYGLIAGEIRTEVKLLALGGFLFVLGWILSRKTT
Ga0196972_10562382	3300020131	Soil	MGPTIGRLLQIIGMIILPIGLLYGLVLGEIRTEVKLLALGGFLYLLGWILTRDRNA
Ga0196977_100071911	3300020146	Soil	MAPTFGRLLQIVGMVILPIGLLYGLVKGEIRTEVQLLALGGFLYVLGWILARERR
Ga0196976_100004517	3300020147	Soil	MSVLIGRLLQLSGMIILPIGLLIGLGRGDIRTEVKLLALGGFLFVLGWILAREKGS
Ga0196965_10512652	3300020154	Soil	MTPLLGRLLQLAGMIILPIGLSYGLIQGEIQTEVKLLALGGFLFVLGWIVSREKR
Ga0196964_100133001	3300020202	Soil	MSVLIGRLLQLAGMIILPIGLMYGLGSGDIRTEVKLLAVGGFLFVLGW
Ga0196964_106376702	3300020202	Soil	IARLLQLSGMIILPIGLIYGLGKGDIQTEIKLLALGGFLFVLGWILGREKNA
Ga0196963_104427061	3300020215	Soil	MAPLLARLLQLSGMIILPIGLIYGLGKGDIQTEVKLLALGGFLFVLGWILGREKKA
Ga0196978_10101062	3300021067	Soil	MNATIGRLLQIVGMIVLPIGLLYGLVRGEIRTEVQLLALGGFLYVLGWILSRERQG
Ga0213902_1008982	3300021290	Soil	MSATVGRLLQLIAMIVLPIGLMYGLARGEIQTEVRLLAIGGFLFVAGWLMARERE
Ga0193706_10207602	3300021339	Soil	MSALVGRLLQIAGMIILPAALLYGLAYDQVHTEVKLLAVGGALFVIGWLMAKKPGS
Ga0193698_10029573	3300021968	Soil	VSALIGRLLQLSGMIVLPIGLMYGFGRGDIRTEVRLLAIGGFLFVLGWILSRERRG
Ga0247788_10375482	3300022901	Soil	MSVLVGRLLQLSGMIILPIGLIYGMGKGEIRTEVQLLALGGFLFVLGWILARDRK
Ga0196960_100143682	3300024426	Soil	MSVLIGRLLQLAGMIILPIGLSYGLIAGEIRTEVKLLALGGFLFLLGRILSRKTT
Ga0209619_104796502	3300025159	Soil	MTPLIARLLQLCGMIILPIGLIYGLGYGDIQTEIKLLALGGFLFVLGWILGRGKKA
Ga0207655_10641031	3300025728	Miscanthus Rhizosphere	PGDRREAMSATLGRLFQLIGMILLPIGLSYGLLKDDIRVEVQLLFLGGFLFLLGWILSRQ
Ga0207660_100056677	3300025917	Corn Rhizosphere	MTATLGRLLQLIGMILLPIGLSYGLLKDNIRVEVQLLFIGGFLFLLGWILARKRE
Ga0207659_1000003683	3300025926	Miscanthus Rhizosphere	MSATLGRLFQLIGMILLPIGLSYGLLKDDIRVEVQLLFLGGFLFLLGWILSRQR
Ga0207670_102022922	3300025936	Switchgrass Rhizosphere	MTAVAGRLLQLVGMIVLPIGLSYGLLRDDIKTEVRLLAIGGFCFVLGWILSRERK
Ga0207689_107826622	3300025942	Miscanthus Rhizosphere	MSATLGRLFQLIGMILLPIGLSYGLLKDDIRVEVQLLFLGGFLFLLGWILSRKR
Ga0207708_1000004181	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSATVGRLLQLIGMIILPIGLAYGLMKNEIRVEVQLLALGGFLFVLGWILQKRTS
Ga0209468_100002275	3300026306	Soil	MSALLGRLFQLIGLIVLPIGLSYGLLRDNIRVEVQLLGIGGFLFLLGWILSRKAN
Ga0214467_10122412	3300027075	Soil	MTPLIGRLLQLAGMIILPIGLSYGLIQGEIRTEVKLLALGGFLFLLGRILAREGKQG
Ga0209486_110347622	3300027886	Agricultural Soil	MSATIGRLLQLIGMIILPIGLAYGLVMNEIRTEVQLLALGGFLFVLGWILSKRAN
Ga0207428_10000030109	3300027907	Populus Rhizosphere	MSALIGRLLQLSGMIILPIGLLYGFGRGQIRTEVQLLALGGFLFVLGWILARERR
Ga0209382_1000108641	3300027909	Populus Rhizosphere	MSPLIGRLLQVSAMIILPIGLIYGLGYGDIRTEVKLLALGGFLFVLGWILAREKSA
Ga0209382_101827181	3300027909	Populus Rhizosphere	GSDLGPLIGRLLQLAAMIVLPIGLSYGLLRDDIQTEVRLLAIGGFLFVLGWILARERK
Ga0272482_102206661	3300028578	Soil	MSATIGRFLQGAALILLPIALSYGLIMDDVRTEVKLLAVGGFIFILGRILAREK
Ga0307309_102149152	3300028714	Soil	EHRPERRRSRDHGRRNVSALIGRLLQLSGMIILPIGLLYGFGRGQIRTEVQLLALGGFLFVLGWIMSRERR
Ga0268243_11221131	3300030510	Soil	VSALAGRLLQLVGLIVLPIGLSYGLLRDDIKTEVRLLAVGGFLFVLGWILSRERK
Ga0307502_100084561	3300031164	Soil	MSPLIGRLMQVSGMIILPIGLLYGLGRGDIRTEVKLLALGGFLFVLGWILSRERSS
Ga0307505_1000049531	3300031455	Soil	MNATIGRLLQLAGMIILPIGLMYGLVKGEIRTEVQLLALGAFLYVLGWILSRERK
Ga0307468_1016041842	3300031740	Hardwood Forest Soil	VSALIGRLLQLSGMIILPIGLLYGFGRGEIRTEVQLLALGGFLFVLGWIMARERR
Ga0310884_108781501	3300031944	Soil	GAGGEAMTATLGRLLQLIGMILLPIGLSYGLLKDNIRVEVQLLFIGGFLFLLGWILARKR
Ga0307416_1010425922	3300032002	Rhizosphere	MTSTIGRLLQLSALILLPIALSYGLLQDDVRTEVKLLALGGFLFILGRILSRER
Ga0307415_1021648752	3300032126	Rhizosphere	SLFGRLLQLSALILLPIALSYGLFKDDVRTEVKLLALGAFLFLLGRILSRER
Ga0334942_000047_14050_14220	3300034008	Biocrust	MTPLIGRLMQLSGMIILPIGLLYGFGRGDIRTEVKLLALGGFLFVLGWILSRERGS
Ga0334949_013818_1_141	3300034027	Biocrust	MSVLIGRLLQVAGMIILPIGLSYGLIHGEVRTEVKLLAVGGFLFLLG
Ga0334963_000040_42379_42546	3300034145	Sub-Biocrust Soil	MSVLVGRLLQVAGMIILPIGLAYGLIHGEVRTEVKLLAVGGFLFLLGWILSRKTT
Ga0334931_058275_425_592	3300034377	Sub-Biocrust Soil	MGALIGRLLQLAALIILPIGLSYGLIKGEIRTEVQLLALGGFLFVLGWILGRERA
Ga0334948_002330_2232_2399	3300034760	Sub-Biocrust Soil	MSVLIGRLLQLAGMIILPIGLSYGLIAGEIRTEVKLLAVGGFLFLLGWILSRKTT
Ga0334948_002883_2607_2777	3300034760	Sub-Biocrust Soil	MSVLIGRLLQLSGMIILPIGLMIGLSGGDIRTEVKLLALGGFLFVLGWILAREKGS
Ga0334935_000515_8978_9145	3300034781	Biocrust	MSVLIGRLLQLAAMIILPIGLSYGLIQGEIRTEVKLLGLGGFLFVLGWILARERS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072730

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences