Metagenome / Metatranscriptome Family F072562

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072562
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	80 residues
Representative Sequence	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT
Number of Associated Samples	99
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.07 %
% of genes near scaffold ends (potentially truncated)	28.10 %
% of genes from short scaffolds (< 2000 bps)	84.30 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.388 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.314 % of family members)
Environment Ontology (ENVO)	Unclassified (34.711 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.149 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.80% β-sheet: 0.00% Coil/Unstructured: 42.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF08299	Bac_DnaA_C	3.31
PF02201	SWIB	1.65
PF11138	DUF2911	0.83
PF13620	CarboxypepD_reg	0.83
PF13650	Asp_protease_2	0.83
PF03989	DNA_gyraseA_C	0.83
PF04545	Sigma70_r4	0.83
PF00498	FHA	0.83
PF03734	YkuD	0.83
PF09954	DUF2188	0.83
PF02866	Ldh_1_C	0.83
PF00903	Glyoxalase	0.83
PF02785	Biotin_carb_C	0.83
PF02786	CPSase_L_D2	0.83
PF07885	Ion_trans_2	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	3.31
COG5531	DNA-binding SWIB/MDM2 domain	Chromatin structure and dynamics [B]	1.65
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	0.83
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.83
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.39 %
Unclassified	root	N/A	6.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.39 %
Unclassified	root	N/A	6.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.39 %
Unclassified	root	N/A	6.61 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	77.69 %
Unclassified	root	N/A	6.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	77.69 %
Unclassified	root	N/A	6.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	60.33 %
Unclassified	root	N/A	6.61 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.83 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.33 %
Unclassified	root	N/A	6.61 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	0.83 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.33 %
Unclassified	root	N/A	6.61 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.83 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.33 %
Unclassified	root	N/A	6.61 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.83 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.33 %
Unclassified	root	N/A	6.61 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.83 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16713298	All Organisms → cellular organisms → Bacteria	2834	Open in IMG/M
2088090014\|GPIPI_16751831	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
2088090014\|GPIPI_16948293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3237	Open in IMG/M
2170459005\|F1BAP7Q01BRCA0	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
2170459006\|GBPF9FW02ISIYO	Not Available	541	Open in IMG/M
2170459007\|GJ61VE201A6V3R	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
2170459009\|GA8DASG01CI2FV	Not Available	507	Open in IMG/M
2170459013\|GO6OHWN01APVX4	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
2170459013\|GO6OHWN02JXWXY	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
2170459019\|G14TP7Y02HOU3X	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	731	Open in IMG/M
2170459023\|GZGNO2B02HNMAY	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
2189573004\|GZGWRS402HKV1V	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300000881\|JGI10215J12807_1089517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1037	Open in IMG/M
3300002099\|JGI24808J26613_1022357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	981	Open in IMG/M
3300002899\|JGIcombinedJ43975_10023727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	989	Open in IMG/M
3300004114\|Ga0062593_101714947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300004114\|Ga0062593_102643266	Not Available	571	Open in IMG/M
3300004463\|Ga0063356_105186285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	560	Open in IMG/M
3300004479\|Ga0062595_101648217	Not Available	601	Open in IMG/M
3300005166\|Ga0066674_10023090	All Organisms → cellular organisms → Bacteria	2703	Open in IMG/M
3300005172\|Ga0066683_10067004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2142	Open in IMG/M
3300005176\|Ga0066679_10956277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	536	Open in IMG/M
3300005294\|Ga0065705_10223583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1307	Open in IMG/M
3300005295\|Ga0065707_10632621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300005295\|Ga0065707_11065636	Not Available	523	Open in IMG/M
3300005329\|Ga0070683_102273023	Not Available	520	Open in IMG/M
3300005332\|Ga0066388_100094472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3429	Open in IMG/M
3300005332\|Ga0066388_102773054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	895	Open in IMG/M
3300005332\|Ga0066388_106729030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300005436\|Ga0070713_100712196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300005437\|Ga0070710_11205342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	560	Open in IMG/M
3300005439\|Ga0070711_100084176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2275	Open in IMG/M
3300005446\|Ga0066686_10318588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1058	Open in IMG/M
3300005447\|Ga0066689_10228059	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005468\|Ga0070707_101220507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300005555\|Ga0066692_10187800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1287	Open in IMG/M
3300005764\|Ga0066903_100036246	All Organisms → cellular organisms → Bacteria	5712	Open in IMG/M
3300006176\|Ga0070765_100101543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2487	Open in IMG/M
3300007255\|Ga0099791_10497410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300009792\|Ga0126374_10796411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	722	Open in IMG/M
3300012198\|Ga0137364_10387273	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300012199\|Ga0137383_11354342	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012201\|Ga0137365_10017655	All Organisms → cellular organisms → Bacteria	5572	Open in IMG/M
3300012201\|Ga0137365_10074914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2554	Open in IMG/M
3300012201\|Ga0137365_10134147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1861	Open in IMG/M
3300012203\|Ga0137399_10118720	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300012205\|Ga0137362_10369283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1243	Open in IMG/M
3300012205\|Ga0137362_11778558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300012208\|Ga0137376_10082411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2698	Open in IMG/M
3300012210\|Ga0137378_10274051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1570	Open in IMG/M
3300012350\|Ga0137372_11097049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300012354\|Ga0137366_10003343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12508	Open in IMG/M
3300012357\|Ga0137384_10406790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1123	Open in IMG/M
3300012361\|Ga0137360_11327811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300012362\|Ga0137361_10388545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1281	Open in IMG/M
3300012683\|Ga0137398_11081420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300012897\|Ga0157285_10125529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300012901\|Ga0157288_10385216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300012907\|Ga0157283_10254942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300012908\|Ga0157286_10404964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300012929\|Ga0137404_10335588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	1319	Open in IMG/M
3300012929\|Ga0137404_11346517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300012930\|Ga0137407_10330446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1400	Open in IMG/M
3300012930\|Ga0137407_11674594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300013096\|Ga0157307_1053562	Not Available	761	Open in IMG/M
3300013306\|Ga0163162_12378848	Not Available	609	Open in IMG/M
3300015077\|Ga0173483_10016862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2542	Open in IMG/M
3300015264\|Ga0137403_10132126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2478	Open in IMG/M
3300015371\|Ga0132258_11812190	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300015372\|Ga0132256_102328223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	639	Open in IMG/M
3300018431\|Ga0066655_10269738	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1096	Open in IMG/M
3300018433\|Ga0066667_11990301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300018468\|Ga0066662_10859130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	887	Open in IMG/M
3300019356\|Ga0173481_10050653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1427	Open in IMG/M
3300019361\|Ga0173482_10271377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300019877\|Ga0193722_1038205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1233	Open in IMG/M
3300020062\|Ga0193724_1016766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1555	Open in IMG/M
3300020580\|Ga0210403_11372628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300021168\|Ga0210406_10029344	All Organisms → cellular organisms → Bacteria	4993	Open in IMG/M
3300021178\|Ga0210408_10264881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1370	Open in IMG/M
3300021411\|Ga0193709_1027358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1378	Open in IMG/M
3300022726\|Ga0242654_10325799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300022726\|Ga0242654_10420770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300024288\|Ga0179589_10165217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	952	Open in IMG/M
3300025915\|Ga0207693_10189789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1617	Open in IMG/M
3300025922\|Ga0207646_10530118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1060	Open in IMG/M
3300025930\|Ga0207701_10089931	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300025932\|Ga0207690_10475033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1008	Open in IMG/M
3300025939\|Ga0207665_10955718	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300026023\|Ga0207677_11245389	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300026314\|Ga0209268_1001257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12584	Open in IMG/M
3300026316\|Ga0209155_1290571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300026557\|Ga0179587_10091940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1823	Open in IMG/M
3300026557\|Ga0179587_10319555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1003	Open in IMG/M
3300027464\|Ga0207447_101709	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300027617\|Ga0210002_1055666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300027655\|Ga0209388_1074883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	975	Open in IMG/M
3300027717\|Ga0209998_10180639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300027876\|Ga0209974_10099610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1015	Open in IMG/M
3300028047\|Ga0209526_10200006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1384	Open in IMG/M
3300028536\|Ga0137415_10140884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2251	Open in IMG/M
3300028906\|Ga0308309_10504276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1046	Open in IMG/M
3300030777\|Ga0075402_12100515	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300030844\|Ga0075377_10047540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300030844\|Ga0075377_11796916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1053	Open in IMG/M
3300031015\|Ga0138298_1525055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300031057\|Ga0170834_103558538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300031231\|Ga0170824_105149421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1980	Open in IMG/M
3300031231\|Ga0170824_119882200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	905	Open in IMG/M
3300031446\|Ga0170820_10306845	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300031446\|Ga0170820_13925937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300031446\|Ga0170820_14766454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300031474\|Ga0170818_102714724	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300031474\|Ga0170818_104530620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300031474\|Ga0170818_108558276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1172	Open in IMG/M
3300031716\|Ga0310813_11151520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300031716\|Ga0310813_11872157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300031740\|Ga0307468_100637290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
3300032205\|Ga0307472_102585464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300033412\|Ga0310810_10269581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1856	Open in IMG/M
3300033412\|Ga0310810_10855419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.74%
Host-Associated	Host-Associated	7.44%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.74%
Plants	Host-Associated → Plants	7.44%
Solid Waste	Engineered → Solid Waste	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.65%
Grass	Engineered → Solid Waste → Grass	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.51%
Loam	Environmental → Terrestrial → Soil → Loam	13.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.31%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027464	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-D (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030777	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00465460	2088090014	Soil	MKNKRNYVMTSVATLTQSGMLAVLLQRQRYKVIDLARRRAQRERARAAFQSTLNWLSGLAHGSIPGRSFRRGFEESVRRPT
GPIPI_01483860	2088090014	Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAHRELARAALRSTLNRLLAHAGIAGRPFRRGFEESVPRHT
GPIPI_02149090	2088090014	Soil	MKNMKDYVMTPSNQTLTQSGLLALLLQRQRRKVIELARRRAHCAQMRMAFGITRDWLLARAHSIIAGRPFRRDFGGNVPRHT
E41_03829870	2170459005	Grass Soil	HMKNRKNYVMTSVATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARTVFRSTLNWLLARANGGIAGRLFRRGFGERVPRHT
L01_07190330	2170459006	Grass Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAHRELARAALRSTLNRLLAHGGIAGRLFGRGFEETVPRHT
L02_06495030	2170459007	Grass Soil	KKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAHHELARAALRSTLNRLLAHGGIAGRPFRRGFEESVPRHT
F47_12703290	2170459009	Grass Soil	MTKSNPTLMQSGLLAVLLQRQRYRVFQLARRSAHREQARAAFRSTLNWLSGLAHGSIAGRAFRRGFVEGVRRPT
N57_00213820	2170459013	Grass Soil	MKNRKNYVMTSVATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARAVFRSTLDWLLTRANGGIAGRLFRRGFGESVPRHT
N57_00066040	2170459013	Grass Soil	SGLLAVLLQRQRYKVIELARRRAQRQQARAVFRSTLNWLLARANGGIAGRLFRRGFGESVPRHT
4MG_01733720	2170459019	Switchgrass, Maize And Mischanthus Litter	MKNRKNYIMTSAATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARAVLGSTLNWLLARAHGGIAGRPFRRGFGESVPRHT
FA3_01221960	2170459023	Grass Soil	MTKSTLTLTQSGLLAVLLQRQRYKVIELARRRAHRKQARAAFRSTLNWLSGLAHGSIARRPFRRGFEESVPRHT
FG2_07021340	2189573004	Grass Soil	MTKSTLTLTQSGLLAVLLQRQRYKVIELAWRRAHRKQARAAFRSTLNWLSGLAHGSIARRPFRRGFEESVPRHT
JGI10215J12807_10895173	3300000881	Soil	GICREHCQISNKEALMKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLAFAHGGIAGRPLRRGFEESVPRHT*
JGI24808J26613_10223572	3300002099	Soil	MKNKXNYVMXSAATLTQSGLLAVLLQRQXYKVIDLARRRAQREQARAAFRSMLNWLLGFARASIAGRPFRRGFEESVRRPT*
JGIcombinedJ43975_100237271	3300002899	Soil	MKNRKNYVMTSTATLTQSGLLAVLLQRQRHKVIELARRRARLQQVRTVFWSTLNWLLARAQGGIAGRTFRRGFGGSVPHHT*
Ga0062593_1017149471	3300004114	Soil	MKNKRNYVMTSATTLTQSGLLAVLLQRQRYKVIDLARRRAQRERARAAFHSTLNWLSGLAHGSIAGRPFRRGFEESVRRPT*
Ga0062593_1026432662	3300004114	Soil	MKNKKSYVMTSAATLTQSGLLAVLLQRQRYKVIDLARRRAQRERARAAFQITLNWLSGLARGSIAGRPFRRGFEESVPRHT*
Ga0063356_1051862852	3300004463	Arabidopsis Thaliana Rhizosphere	MKNRKDHVMTPSNQTLTQSGLLALLLQRQRRKVIELARRRAHCAQVRMAFGITRDWLLARAHSIIAGRPFRRGFGGNVLQHI*
Ga0062595_1016482171	3300004479	Soil	MKNKKSYVMTSAATLTQSGLLAVLLQRQRYKVIDLARRRAQRERARAAFQSTLNWLSGLAHGSIAGRPFRRGFEESVRRPT*
Ga0066674_100230901	3300005166	Soil	MKNKKHYVTTSAGTLTQSGLLAVLLRRQRYKAIELARRRAHREQARAAFRGTLNWLLARAHGGIAGRPFRRGFGESVPRHT*
Ga0066683_100670044	3300005172	Soil	MKNKKHYVTTSAGTLTQSGLLAVLLRRQRYKAIELARRRAHREQARAAFRGTLNWLLARAHDGIAGRPFRRGFG*
Ga0066679_109562771	3300005176	Soil	MKNKKNYVMTSAGTLKQTGLLAILLQRQRYKVIELARRRAHREQARATFRSTLNWLLALAHGGIAGRPFRRGFEESVRRPT*
Ga0065705_102235833	3300005294	Switchgrass Rhizosphere	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLAFAHGGIAGRPFRRGFEESVPRHT*
Ga0065707_106326211	3300005295	Switchgrass Rhizosphere	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWVLAFAHGGIAGRPFRRGFEESVPRHT*
Ga0065707_110656361	3300005295	Switchgrass Rhizosphere	MKNKNNYVMTSAATLTQSGMLAVLLQRQRYKVIDLARRRAQRERARAAFQITLNWLSGLARGSIAGRPFRRGFEESVRRPT*
Ga0070683_1022730231	3300005329	Corn Rhizosphere	MKNKNNYVMTSAATLTQSGMLAVLLQRQRYKVIDLARRRAQRERARAAFQITLNWLSGLARGSIADRPFRRGFEESVRRPT*
Ga0066388_1000944724	3300005332	Tropical Forest Soil	MKNKKDYVMTPSNQTLTQSGLLALLLQRQRRKVTELARYRAHCAQVRVAFGITRDWLLARAHSIIAGRPFRRGFGGNIPRHT*
Ga0066388_1027730541	3300005332	Tropical Forest Soil	MKNRNDYVITKSNPTLTQSGMLPLLLQRQRGKVIELARRRAHREHVRAAFRSTLNWLLARAHGVISGRLFHRSLGRSVPRHI*
Ga0066388_1067290302	3300005332	Tropical Forest Soil	MTSAGTLTQSGLLAALLQRQRYKVMELARRRAHREQARAAFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0070713_1007121962	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTSTGTLTQSGLLAILLQRQRYKVIELARRRAHRERARGVFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0070710_112053421	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	KNKKHYVMTSAGTLTQSGLLAVLLQRQRYKGIESARRRAHRERARAALRSALNRLLAHGGIGGRLFRRGFEESVPRHT*
Ga0070711_1000841764	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKNKKNYLMTSAGTLTQTGLLAVLLQRQRYKVIELARRRAHRERAREVFRSTLNWLLALAHGGIAARPFRRGFEESVPRHT*
Ga0066686_103185882	3300005446	Soil	MKNKKHYVTTSAGTLTQSGLLAVLLRRQRYKAIELARRRAHREQARAAFRGTLNWLLARAHDGIAGRPFRRGFGESVPRHT*
Ga0066689_102280593	3300005447	Soil	MTKSTPTLTQSGLLAVLLEHQRRKVIELARRRAHREQVRAAFWSILSRLLARAHGATADRLFRRGFGGTVSRRT*
Ga0070707_1012205071	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKNRKNYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALAHRGIAGRPFRRGFEESVPRHT*
Ga0066692_101878002	3300005555	Soil	MKNKKNYVMTSAATLTQSGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0066903_1000362464	3300005764	Tropical Forest Soil	MKNKKDYVMTPSNQTLTQSGLLALLLQRQRRKVTELARHRAHCAQVRVAFGITRDWLLSRAHSIIAGRPFRRGFGGNIPRHT*
Ga0070765_1001015433	3300006176	Soil	MKSKKNYVMTSAATLTQNGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALPHGGIASRPFRRGFEESVRRHT*
Ga0099791_104974102	3300007255	Vadose Zone Soil	MKSKKNYVMTSAATLTQSGLLAVLLQRQRYKVIELARRRAHREQARATSRSTLNWLLALTHGGIGGRPFRRSFEESVPRHT*
Ga0126374_107964111	3300009792	Tropical Forest Soil	MKNKKDYVMTPSNQTLTQSGLLALLLQRQRRKVTELARHRAHCAQVRVAFGITRDWLLARAHSIIAGRPFRRGFGGNIPRHT*
Ga0137364_103872731	3300012198	Vadose Zone Soil	SGPLAVLLQRQRYKAIDFARRRAHREQACAAFWSTLNWLLGLAHGSIAGRPFRRGFEESARRPT*
Ga0137383_113543421	3300012199	Vadose Zone Soil	MTKSTPTLTQSGLLAVLLEHQRRKVIELARRRAHREQVRAAFWSILTRLLARAHGATADRLFRRGFWGT
Ga0137365_100176551	3300012201	Vadose Zone Soil	SNKEALMKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0137365_100749141	3300012201	Vadose Zone Soil	SNKEALMKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWVLAFAHGGIAGRPFRRGFEESVPRHT*
Ga0137365_101341472	3300012201	Vadose Zone Soil	MKNKKHYVMTSAGTLTQSGLLAVLSQRQRYKVIELARRRAQRQQARAAFWSTLNWLLAFAHGGIAGRPFRRGFGESVPRHT*
Ga0137399_101187202	3300012203	Vadose Zone Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAYRELARAALRSTLNRLLAHGGIAGRLFRRGFEESVPRHT*
Ga0137362_103692832	3300012205	Vadose Zone Soil	MKNKKNYVMTSAATLTQSALLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALGHGGIAGRPFRRGFEESVPRHT*
Ga0137362_117785581	3300012205	Vadose Zone Soil	MKNKKNYVMTSAATLTQSGLLAVLLQRQRYKVIELARHRAKREQARAAFRSTLNWLLALTHGGIGGRPFRRSFEESVPRHT*
Ga0137376_100824114	3300012208	Vadose Zone Soil	MKNKKNYVMTSTGTLTQSGLLAVLLQRQRYKVIDFARRRGHREQARAAFRSTLNWLLGLAHGSIAGRPFRRGFEESARRPT*
Ga0137378_102740513	3300012210	Vadose Zone Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0137372_110970491	3300012350	Vadose Zone Soil	HCQISNKEALMKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0137366_1000334316	3300012354	Vadose Zone Soil	KNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWVLAFAHGGIAGRPFRRGFEESVPRHT*
Ga0137384_104067901	3300012357	Vadose Zone Soil	TSAGTLTQSGLLAVLLQRQRYKVIELARRRAQRQQARAAFWSTLNWLLAFAHGGIAGRPFRRGFGESVPRHT*
Ga0137360_113278111	3300012361	Vadose Zone Soil	MKNKKNYVMTSAATLTQSALLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0137361_103885451	3300012362	Vadose Zone Soil	MKSKKNYVMTSAATLTQSGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALGHGGIAGRPFRRGFEESVPRHT*
Ga0137398_110814202	3300012683	Vadose Zone Soil	MKNKKNYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALAHGGIAGRPFRRGFEESVP
Ga0157285_101255291	3300012897	Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLAFAPGGIAGRPFRRGFEESVPRHT*
Ga0157288_103852161	3300012901	Soil	NLEKEALMKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHCEQARAAFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0157283_102549421	3300012907	Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHRQQARAAFRSTLNWVLAFAHGGIAGRPFRRGFEESVPRHT*
Ga0157286_104049641	3300012908	Soil	REHCQTSNKEALMKNKRNYVMTSATTLTQSGVLAVLLQRQRYKVIDLARRRAQRERARAAFHSTLNWLSGLAHGSIAGRPFRRGFEESVRRPT*
Ga0137404_103355881	3300012929	Vadose Zone Soil	TQSGLLAVLLQRQRYKVIELARHRAKREQARAAFRSTLNWLLALTHGGIGGRPFRRSFEESVPRHT*
Ga0137404_113465172	3300012929	Vadose Zone Soil	MKSKKNYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALGHGGIAGRPFRRGFEESVPRHT*
Ga0137407_103304462	3300012930	Vadose Zone Soil	MTSAATITQSALLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALAHGGIAGRPFRRGFEESVPRHT*
Ga0137407_116745941	3300012930	Vadose Zone Soil	VHRQRFGAIAERTDRKNYVMTKSTLTLTQSGLLAVLLQRQRRKVIELARRRAHREHMRAAIWSALTWLLARFHGATAG*
Ga0157307_10535621	3300013096	Soil	MKNKKSYVMTSAATLTQSGLLAVLLQRQRYKVIDLARRRAQRERARAAFHSTLNWLSGLAHGSIAGRPFRRGFEERVPRHT*
Ga0163162_123788481	3300013306	Switchgrass Rhizosphere	MKNKNNYVMTSAATLTQSGMLAVLLQRQRYKVIDLARRRAQRERARAAFQSTLNWLSGLAHGSIAGRPFRRGFEE
Ga0173483_100168621	3300015077	Soil	MGICREHCQTSNKEALMKNKRNYVMTSATTLTQSGLLAVLLQRQRYKVIDLARRRAQRERARAAFHSTLNWLSGLAHGSIAGRPFRRGFEESVRRPT*
Ga0137403_101321263	3300015264	Vadose Zone Soil	MKNKKNYVMTSAATLTQSGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALGHGGIAGRPFRRGFEESVPRHT*
Ga0132258_118121901	3300015371	Arabidopsis Rhizosphere	MKNKKSYVMTSAATLTQSGLLAVLLQRQRYKVIDLARRRAQRERARAAFHSTLNWLSGLAHGSIAGRPFRRGFEESVRRPT*
Ga0132256_1023282232	3300015372	Arabidopsis Rhizosphere	LMKNKKNYVMTSAATLTQSGMLAVLLQRQRYKVIDLARRRAQRERARAAFHSTLNWLSGLAHGSIAGRPFRRGFEESVRRPT*
Ga0066655_102697383	3300018431	Grasslands Soil	MKNKKHYVTTSAGTLTQSGLLAVLLRRQRYKAIELARRRAHREQARAAFRGTLNWLLARAHGGIAGRPFRRGFGESVPRHT
Ga0066667_119903011	3300018433	Grasslands Soil	LTQSGLLAVLLRRQRYKAIELARRRAHREQARAAFRGTLNWLLARAHDGIAGRPFRRGFGESVPRHT
Ga0066662_108591303	3300018468	Grasslands Soil	MTKSTPTLTQSGLLAVLLEHQRRKVIELARRRAHREQVRAAFWSILTRLLARAHGATADRLFRRGFWGTVSRLT
Ga0173481_100506533	3300019356	Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLAFAHGGIAGRPFRRGFEESVPRHT
Ga0173482_102713773	3300019361	Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWVLAFAHGGIAGRPFRRGFEESVPRHT
Ga0193722_10382052	3300019877	Soil	MKNKQNCVMTSAATLTQSGLLALLLQRQRYKVIELARRRAHRQQARAAFRSTLDWLLARALGSIAVRRFRRGFGDSVPRHT
Ga0193724_10167663	3300020062	Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRADRELARAALRSTLNRLLAHGGIAGRLFRRGFEESVPRHT
Ga0210403_113726282	3300020580	Soil	MKNRKNYVRTSVATLTQSGLLALLLQRQRYKVIELARRRAHREQARAAFRSRLNWLLALAHGAIAVRPFRRGFGESVPR
Ga0210406_100293445	3300021168	Soil	MKNRKNYVRTSVATLTQSGLLALLLQRQRYKVIELARRRAHREQARAAFRGRLNWLLALAHGAIAVRPFRRGFGESVPRQT
Ga0210408_102648811	3300021178	Soil	MKNRKNYVRTSVATLTQSGLLALLLQRQRDKVIESARRRAHREQARAAFRSRLNWLLALAHGAIAVRPFRRGFGESVPR
Ga0193709_10273582	3300021411	Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAHRELARAALRSTLNRLLAHGGIAGRLFRQGFEESVPRHT
Ga0242654_103257992	3300022726	Soil	LMKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQAREAFRSILKWLLALAHGGIAGRPFRRGFEESVPRHT
Ga0242654_104207701	3300022726	Soil	LMKNRKNYVITSAPTLTQSGLLAVLLQRQRYKVIELARRRAQRQQARAVFRSILSWLLTLAHGGIAGRPFRRGFGEGVPRHT
Ga0179589_101652172	3300024288	Vadose Zone Soil	MTSGGTLAQSGLLAILLQRQRYKVIELARRRAHRERARGVFRSTINWLLALAHGGIAGRPFRRGFEESVPRHT
Ga0207693_101897892	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKKNYVMTSAATLTQSGLLAVLLQRQRYKVIELARRRVHREQARATFRSTLNWLLALAHGGMPGRPFRRGFEESVRRPT
Ga0207646_105301182	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKNRKNYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALAHRGIAGRPFRRGFEESVPRHT
Ga0207701_100899312	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKNKNNYVMTSAATLTQSGMLAVLLQRQRYKVIDLARRRAQRERARAAFQITLNWLSGLARGSIAGRPFRRGFEESVRRPT
Ga0207690_104750332	3300025932	Corn Rhizosphere	MKNKNNYVMTSAATLTQSGMLAVLLQRQRYKVIDLARRRAQRERARAAFQITLNWLSGLARGSIADRPFRRGFEESVRRPT
Ga0207665_109557182	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAHRELARAALRSTLNRVLGHGGIAGRLFRRGFEESVPR
Ga0207677_112453893	3300026023	Miscanthus Rhizosphere	WEFVRNRVKTSNKEALMKNKNNYVMTSAATLTQSGMLAVLLQRQRYKVIDLARRRAQRERARAAFQITLNWLSGLARGSIAGRPFRRGFEESVRRPT
Ga0209268_10012579	3300026314	Soil	MKNKKHYVTTSAGTLTQSGLLAVLLRRQRYKAIELARRRAHREQARAAFRGTLNWLLARAHDGIAGRPFRRGFGESVPRHT
Ga0209155_12905711	3300026316	Soil	RNYVMTRSIPTLTQSGLLAVLLQRRHYKLIQLARRRAYRKQARAAFRSMLNWLLTLAHGGIAGRPFHRGFEERVPHHT
Ga0179587_100919403	3300026557	Vadose Zone Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAHRELARAALRSTLNRLLAHGGIAGRLFRRGFEESVPRHT
Ga0179587_103195552	3300026557	Vadose Zone Soil	CREHCQISNKEALMKKKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQTRAAFRSTLNRLLALAHGGIAGRPFRRGFEESVPRHT
Ga0207447_1017092	3300027464	Soil	MKNRKNYVMTKSNLTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLAFAHGGIAGRPLRR
Ga0210002_10556662	3300027617	Arabidopsis Thaliana Rhizosphere	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLAFAHGGIAGRPLRRGFEESVPRHT
Ga0209388_10748832	3300027655	Vadose Zone Soil	MKSKKNYVMTSAATLTQSGLLAVLLQRQRYKVIELARRRAHRERARGVFRSTINWLLALAHGGIAGRPFRRGFEESVPRHT
Ga0209998_101806392	3300027717	Arabidopsis Thaliana Rhizosphere	MKNKKHYVMTSAGTFTQSGLLAVLLQRQRYKVIELARRRAHREQARAASRSTLNWLLAFAHGGIAGRLFRRGFEESVPRHT
Ga0209974_100996102	3300027876	Arabidopsis Thaliana Rhizosphere	MENKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLAFAHGGIAGRPFRRGFEESVPRHT
Ga0209526_102000062	3300028047	Forest Soil	MKNKKNYVMTSAATLTQSGLLALLLQRQRYKVIELARRRAHRHQARAAFRSTINWLLARALGSIAVRRFRRGFGDSVPRHT
Ga0137415_101408844	3300028536	Vadose Zone Soil	MKKKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQTRAAFRSTLNRLLALAHGGIAGRPFRRGFEESVPRHT
Ga0308309_105042762	3300028906	Soil	MKSKKNYVMTSAATLTQNGLLAVLLQRQRYKVIELARRRAHREQARATFRSTLNWLLALPHGGIASRPFRRGFEESVRRHT
Ga0075402_121005151	3300030777	Soil	MKNRKNYVMTSVATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARAVFRSTLNWLLARAHGGIASRLFRRGFGESVPRHT
Ga0075377_100475402	3300030844	Soil	RRYVMTKSTPTLTQSGLLAVLLQRQRYRVFQLARRRAHRQQARAVFRSTLNWLLARAHGGIAGRPFRRGFEESVPRHT
Ga0075377_117969161	3300030844	Soil	MTSVATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARTVFRSTLNWLLARANGGIAGRLFRRGFGERVPRHT
Ga0138298_15250552	3300031015	Soil	MTKSTPTLTQSGLLAVLLQRQRYKVIELARRRAHRQQARAVFRSTLNWLLARAHSGIAGRPFHRGFEESVPRHT
Ga0170834_1035585381	3300031057	Forest Soil	MKNRKNYVMTSVATLTQSGLLAVLLQRQRYKVIELARRQAQRQQVRAVFRNTLNWLLARANGGIAGRLFRRGFGESVPRHT
Ga0170824_1051494213	3300031231	Forest Soil	MKNRKNYVMTSVATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARTVFRSTLNWLLARANGGIAGRLFRRGFGERVPRHT
Ga0170824_1198822001	3300031231	Forest Soil	MKNRKNYVMTSVATLTQSGMLAVLLQRQRYKVIELARRRAQRQQVRAVFRSTLNWLLARANGGIAGRLFRRGFGESVPRHT
Ga0170820_103068451	3300031446	Forest Soil	MKNRKNYVMTSVATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARTVFRSTLNWLLARANGGIAGRLFRRGFGERVP
Ga0170820_139259372	3300031446	Forest Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAHHELARAALRSTLNRLLAHGGIAGRPFRRGFEESVPRHT
Ga0170820_147664541	3300031446	Forest Soil	AHMKNRKNYVMTSVATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARTVFRSTLNWLLARANGGIAGRLFRRGFGERVPRHT
Ga0170818_1027147242	3300031474	Forest Soil	MKNRKNYVMTSVATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARTVFRSTLNWLLARANGGIAGRLFRRGFGE
Ga0170818_1045306201	3300031474	Forest Soil	MKDRKNYVKTSVATLTQSGLLAVLLQRQRHNVIQLARRRAHREQARASFRSRLNWLLALAHSAIAVRPFRRGFGESVPRQT
Ga0170818_1085582763	3300031474	Forest Soil	TLTQSGLLAVLLQRQRYKVIELARRRAQRQQARTVFRSPLNWLLARANGGIAGRLFRRGFGERVPRHT
Ga0310813_111515201	3300031716	Soil	MKNKKNYVMTSAATLTQSGLLAVLLQRQHYKVIDLARRRAQRERARAAFQSTLNWLSGLAHGSIAGRPFRRGFEESVRRPT
Ga0310813_118721572	3300031716	Soil	MKNRKNYIMTSAATLTQSGLLAVLLQRQRYKVIELARRRAQRQQARAVLRSTLNWLLARAHGGIAGRPFRRGFGESVPRHT
Ga0307468_1006372903	3300031740	Hardwood Forest Soil	MKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIESARRRAHRERARAALRSALNRLLAHGGIAGRLFRRGFEESVPRHT
Ga0307472_1025854641	3300032205	Hardwood Forest Soil	GLTAESVERTVKSRIRRLMKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKGIESARRRAHRERARAALRSALNRLLAHGGIGGRLFRRGFEESVPRHT
Ga0310810_102695813	3300033412	Soil	MKNKKNYVMTSAATLTQSGLLAVLLQRQHYKVIDLARRRAQRAQARAAFRSTLNWLLGLARGGIAGRPFRRGFEESVRRPT
Ga0310810_108554193	3300033412	Soil	ALMKNKKHYVMTSAGTLTQSGLLAVLLQRQRYKVIELARRRAHREQARAAFRSTLNWLLAFAHGGIAGRPFRRGFEESVPRHT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072562

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences