Metagenome / Metatranscriptome Family F072100

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072100
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	57 residues
Representative Sequence	MDPFLFPTSNVLINTFLRSIIVILVMILGFQTSWYSAYWGAVVHDAISLILVYSYI
Number of Associated Samples	93
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	29.17 %
% of genes near scaffold ends (potentially truncated)	19.83 %
% of genes from short scaffolds (< 2000 bps)	50.41 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (84.298 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (31.405 % of family members)
Environment Ontology (ENVO)	Unclassified (82.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (85.950 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF16903	Capsid_N	28.10
PF00265	TK	5.79
PF04560	RNA_pol_Rpb2_7	3.31
PF04451	Capsid_NCLDV	3.31
PF04777	Evr1_Alr	2.48
PF04567	RNA_pol_Rpb2_5	1.65
PF00041	fn3	1.65
PF01755	Glyco_transf_25	1.65
PF02675	AdoMet_dc	1.65
PF13508	Acetyltransf_7	1.65
PF04566	RNA_pol_Rpb2_4	0.83
PF01652	IF4E	0.83
PF03477	ATP-cone	0.83
PF04947	Pox_VLTF3	0.83
PF00004	AAA	0.83
PF00692	dUTPase	0.83
PF13423	UCH_1	0.83
PF05711	TylF	0.83
PF08148	DSHCT	0.83
PF01391	Collagen	0.83
PF09588	YqaJ	0.83
PF01844	HNH	0.83
PF13360	PQQ_2	0.83
PF05050	Methyltransf_21	0.83
PF01501	Glyco_transf_8	0.83
PF00194	Carb_anhydrase	0.83
PF00535	Glycos_transf_2	0.83
PF00852	Glyco_transf_10	0.83
PF13392	HNH_3	0.83
PF01384	PHO4	0.83
PF13909	zf-H2C2_5	0.83
PF02511	Thy1	0.83
PF01541	GIY-YIG	0.83
PF00773	RNB	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0085	DNA-directed RNA polymerase, beta subunit/140 kD subunit	Transcription [K]	5.79
COG1435	Thymidine kinase	Nucleotide transport and metabolism [F]	5.79
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	1.65
COG3306	Glycosyltransferase involved in LPS biosynthesis, GR25 family	Cell wall/membrane/envelope biogenesis [M]	1.65
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.83
COG0557	Exoribonuclease R	Transcription [K]	0.83
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.83
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.83
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.83
COG1442	Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.83
COG4581	Superfamily II RNA helicase	Replication, recombination and repair [L]	0.83
COG4776	Exoribonuclease II	Transcription [K]	0.83
COG5597	N-acetylglucosaminyl transferase	Cell wall/membrane/envelope biogenesis [M]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
All Organisms	root	All Organisms	15.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Viruses	superkingdom	All Organisms → Viruses	8.26 %
cellular organisms	root	All Organisms → cellular organisms	7.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.13 %
Varidnaviria	clade	All Organisms → Viruses → Varidnaviria	4.13 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Bamfordvirae	kingdom	All Organisms → Viruses → Varidnaviria → Bamfordvirae	4.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
Discoba	clade	All Organisms → cellular organisms → Eukaryota → Discoba	0.83 %
Haptista	clade	All Organisms → cellular organisms → Eukaryota → Haptista	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Nucleocytoviricota	phylum	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota	4.13 %
Haptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta	0.83 %
Euglenozoa	phylum	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Megaviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	4.13 %
Kinetoplastea	class	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea	0.83 %
Prymnesiophyceae	clade	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Algavirales	order	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales	1.65 %
Metakinetoplastina	subclass	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina	0.83 %
Phaeocystales	order	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Phycodnaviridae	family	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae	1.65 %
Trypanosomatida	order	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida	0.83 %
Phaeocystaceae	family	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Trypanosomatidae	family	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae	0.83 %
Phaeocystis	genus	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis	0.83 %
unclassified Phycodnaviridae	no rank	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → unclassified Phycodnaviridae	0.83 %
Prymnesiovirus	genus	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prymnesiovirus	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Chrysochromulina ericina virus	species	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → unclassified Phycodnaviridae → Chrysochromulina ericina virus	0.83 %
unclassified Prymnesiovirus	no rank	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prymnesiovirus → unclassified Prymnesiovirus	0.83 %
Phaeocystis globosa	species	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis globosa	0.83 %
Trypanosomatidae	family	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.30 %
Phaeocystis globosa virus 12T	species	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prymnesiovirus → unclassified Prymnesiovirus → Phaeocystis globosa virus 12T	0.83 %
Chrysochromulina ericina virus	species	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → unclassified Phycodnaviridae → Chrysochromulina ericina virus	0.83 %
Phaeocystis globosa	species	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis globosa	0.83 %
Trypanosomatidae	family	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000162\|TB03JUN2009H_c008783	Not Available	1505	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1001151	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae	19912	Open in IMG/M
3300001266\|B570J13884_103607	Not Available	1033	Open in IMG/M
3300001950\|GOS2227_1022663	Not Available	1615	Open in IMG/M
3300002091\|JGI24028J26656_1001387	All Organisms → cellular organisms → Bacteria	5477	Open in IMG/M
3300002092\|JGI24218J26658_1000973	Not Available	10465	Open in IMG/M
3300002933\|G310J44882_10001344	Not Available	11005	Open in IMG/M
3300003388\|JGI25910J50241_10030999	Not Available	1810	Open in IMG/M
3300003431\|JGI25913J50563_1012479	Not Available	1454	Open in IMG/M
3300003431\|JGI25913J50563_1032241	Not Available	817	Open in IMG/M
3300003616\|JGI25928J51866_1035314	Not Available	1274	Open in IMG/M
3300003815\|Ga0007856_1002040	Not Available	1927	Open in IMG/M
3300004112\|Ga0065166_10445367	Not Available	544	Open in IMG/M
3300004123\|Ga0066181_10120544	Not Available	731	Open in IMG/M
3300004125\|Ga0066182_10005246	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300004684\|Ga0065168_1003612	Not Available	2494	Open in IMG/M
3300004684\|Ga0065168_1007529	Not Available	1715	Open in IMG/M
3300004684\|Ga0065168_1009005	Not Available	1569	Open in IMG/M
3300004685\|Ga0065177_1030565	Not Available	1016	Open in IMG/M
3300004694\|Ga0065170_1004034	Not Available	2020	Open in IMG/M
3300004694\|Ga0065170_1007510	Not Available	1477	Open in IMG/M
3300004777\|Ga0007827_10002799	Not Available	4950	Open in IMG/M
3300004806\|Ga0007854_10000989	Not Available	18450	Open in IMG/M
3300005739\|Ga0076948_1115344	Not Available	1593	Open in IMG/M
3300006072\|Ga0007881_1068841	Not Available	903	Open in IMG/M
3300006119\|Ga0007866_1002562	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prymnesiovirus → unclassified Prymnesiovirus → Phaeocystis globosa virus 12T	4686	Open in IMG/M
3300006127\|Ga0007805_1009385	Not Available	2519	Open in IMG/M
3300006805\|Ga0075464_10036031	Not Available	2668	Open in IMG/M
3300006805\|Ga0075464_10327478	Not Available	924	Open in IMG/M
3300006805\|Ga0075464_10377079	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis globosa	860	Open in IMG/M
3300009068\|Ga0114973_10000002	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	189950	Open in IMG/M
3300009151\|Ga0114962_10006764	All Organisms → cellular organisms → Eukaryota	8799	Open in IMG/M
3300009152\|Ga0114980_10009518	Not Available	6293	Open in IMG/M
3300009154\|Ga0114963_10005653	All Organisms → Viruses	8573	Open in IMG/M
3300009154\|Ga0114963_10006290	Not Available	8129	Open in IMG/M
3300009155\|Ga0114968_10506628	Not Available	647	Open in IMG/M
3300009163\|Ga0114970_10426847	Not Available	733	Open in IMG/M
3300009164\|Ga0114975_10030785	Not Available	3213	Open in IMG/M
3300009164\|Ga0114975_10077024	Not Available	1942	Open in IMG/M
3300009164\|Ga0114975_10351834	Not Available	809	Open in IMG/M
3300009181\|Ga0114969_10334849	Not Available	883	Open in IMG/M
3300009183\|Ga0114974_10762291	Not Available	522	Open in IMG/M
3300009184\|Ga0114976_10350452	Not Available	780	Open in IMG/M
3300009184\|Ga0114976_10410437	Not Available	707	Open in IMG/M
3300009419\|Ga0114982_1000050	Not Available	58121	Open in IMG/M
3300009419\|Ga0114982_1029740	All Organisms → Viruses	1776	Open in IMG/M
3300009684\|Ga0114958_10116951	Not Available	1366	Open in IMG/M
3300010158\|Ga0114960_10383944	Not Available	689	Open in IMG/M
3300010334\|Ga0136644_10017138	Not Available	4944	Open in IMG/M
3300010334\|Ga0136644_10048799	Not Available	2736	Open in IMG/M
3300010334\|Ga0136644_10544002	Not Available	643	Open in IMG/M
3300010885\|Ga0133913_10017678	Not Available	18983	Open in IMG/M
3300010885\|Ga0133913_10149251	All Organisms → Viruses	6252	Open in IMG/M
3300010885\|Ga0133913_10322974	Not Available	4087	Open in IMG/M
3300010885\|Ga0133913_10933179	Not Available	2250	Open in IMG/M
3300010885\|Ga0133913_12028319	Not Available	1428	Open in IMG/M
3300011009\|Ga0129318_10120281	Not Available	772	Open in IMG/M
3300011116\|Ga0151516_10102	Not Available	44774	Open in IMG/M
3300013004\|Ga0164293_10410442	Not Available	910	Open in IMG/M
3300013005\|Ga0164292_10014484	All Organisms → Viruses	6456	Open in IMG/M
3300013014\|Ga0164295_10169684	Not Available	1624	Open in IMG/M
3300013093\|Ga0164296_1322650	Not Available	576	Open in IMG/M
3300013285\|Ga0136642_1007200	Not Available	3641	Open in IMG/M
3300018815\|Ga0187845_1000565	All Organisms → cellular organisms → Bacteria	22262	Open in IMG/M
3300018868\|Ga0187844_10024939	Not Available	3019	Open in IMG/M
3300019784\|Ga0181359_1008921	Not Available	3485	Open in IMG/M
3300019784\|Ga0181359_1147615	Not Available	810	Open in IMG/M
3300020048\|Ga0207193_1115526	Not Available	2379	Open in IMG/M
3300020572\|Ga0207909_1010123	Not Available	1900	Open in IMG/M
3300020704\|Ga0214250_1032744	Not Available	621	Open in IMG/M
3300020706\|Ga0214217_1020324	Not Available	704	Open in IMG/M
3300020716\|Ga0214207_1003446	Not Available	2793	Open in IMG/M
3300021119\|Ga0214204_1000120	All Organisms → cellular organisms → Eukaryota	16105	Open in IMG/M
3300021125\|Ga0214211_1027086	Not Available	544	Open in IMG/M
3300021336\|Ga0210307_1309470	Not Available	1583	Open in IMG/M
3300021516\|Ga0194045_1046115	Not Available	1114	Open in IMG/M
3300021519\|Ga0194048_10002778	Not Available	8654	Open in IMG/M
3300022752\|Ga0214917_10138489	Not Available	1314	Open in IMG/M
3300023174\|Ga0214921_10000038	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	262751	Open in IMG/M
3300023174\|Ga0214921_10160243	Not Available	1501	Open in IMG/M
3300023174\|Ga0214921_10218407	Not Available	1164	Open in IMG/M
3300023179\|Ga0214923_10000358	Not Available	70396	Open in IMG/M
3300023184\|Ga0214919_10000082	Not Available	146487	Open in IMG/M
3300023184\|Ga0214919_10000219	Not Available	97876	Open in IMG/M
3300023184\|Ga0214919_10216722	Not Available	1414	Open in IMG/M
3300025372\|Ga0207957_1001277	Not Available	5315	Open in IMG/M
3300025372\|Ga0207957_1034907	Not Available	549	Open in IMG/M
3300025383\|Ga0208250_1017509	Not Available	1243	Open in IMG/M
3300025385\|Ga0207956_1003281	Not Available	3112	Open in IMG/M
3300025407\|Ga0208378_1008487	Not Available	2219	Open in IMG/M
3300025413\|Ga0208614_1006416	Not Available	2343	Open in IMG/M
3300025429\|Ga0208500_1008474	Not Available	1622	Open in IMG/M
3300025429\|Ga0208500_1016467	Not Available	1010	Open in IMG/M
3300025467\|Ga0208260_1050653	Not Available	863	Open in IMG/M
3300027688\|Ga0209553_1022477	Not Available	2686	Open in IMG/M
3300027708\|Ga0209188_1031794	Not Available	2514	Open in IMG/M
3300027710\|Ga0209599_10000183	All Organisms → cellular organisms → Bacteria	43828	Open in IMG/M
3300027710\|Ga0209599_10054885	Not Available	1051	Open in IMG/M
3300027712\|Ga0209499_1000669	Not Available	25059	Open in IMG/M
3300027712\|Ga0209499_1116112	Not Available	1002	Open in IMG/M
3300027734\|Ga0209087_1080571	Not Available	1415	Open in IMG/M
3300027741\|Ga0209085_1004301	All Organisms → Viruses	7676	Open in IMG/M
3300027746\|Ga0209597_1000069	Not Available	59672	Open in IMG/M
3300027747\|Ga0209189_1311466	Not Available	609	Open in IMG/M
3300027749\|Ga0209084_1245844	Not Available	697	Open in IMG/M
3300027756\|Ga0209444_10311836	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	522	Open in IMG/M
3300027759\|Ga0209296_1101164	Not Available	1376	Open in IMG/M
3300027760\|Ga0209598_10000012	Not Available	140581	Open in IMG/M
3300027763\|Ga0209088_10000006	Not Available	239697	Open in IMG/M
3300027764\|Ga0209134_10000271	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → unclassified Phycodnaviridae → Chrysochromulina ericina virus	13633	Open in IMG/M
3300027764\|Ga0209134_10002915	Not Available	4904	Open in IMG/M
3300027969\|Ga0209191_1004330	Not Available	8249	Open in IMG/M
3300027971\|Ga0209401_1000007	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes	190592	Open in IMG/M
3300028025\|Ga0247723_1159948	Not Available	521	Open in IMG/M
3300028393\|Ga0304728_1234708	Not Available	621	Open in IMG/M
3300031759\|Ga0316219_1000992	Not Available	33832	Open in IMG/M
3300034051\|Ga0335024_0000079	Not Available	45868	Open in IMG/M
3300034105\|Ga0335035_0049349	Not Available	2777	Open in IMG/M
3300034168\|Ga0335061_0031092	Not Available	2856	Open in IMG/M
3300034168\|Ga0335061_0343621	Not Available	776	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.87%
Terrestrial	Environmental → Terrestrial	4.13%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.91%
Marine	Environmental → Aquatic → Marine	4.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.13%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	51.24%
Lentic	Environmental → Aquatic → Freshwater → Lentic	39.67%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.13%
Coastal	Environmental → Aquatic → Marine → Coastal	3.31%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	50.41%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	30.58%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.96%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.13%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.83%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.83%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	31.41%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	17.36%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.22%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.57%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	4.13%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.31%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.31%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	1.65%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.65%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.83%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.83%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.83%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.83%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000162	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300001266	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion	Environmental	Open in IMG/M
3300001950	Marine microbial communities from Delaware Bay, New Jersey, USA - GS011	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004123	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300005739	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011116	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300018815	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_68	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020572	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020704	Freshwater microbial communities from Trout Bog Lake, WI - 29JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020706	Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300021119	Freshwater microbial communities from Trout Bog Lake, WI - 23JUN2009 epilimnion	Environmental	Open in IMG/M
3300021125	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 epilimnion	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021516	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025385	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025467	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300034051	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009H_0087832	3300000162	Freshwater	MDPFLFPTSNVLINTFLRSIIVILVMILGFQTSWYSAYWGAVVHDAISLILVYSYI*
TBL_comb48_EPIDRAFT_100115124	3300000439	Freshwater	MDVWFFPTSNPLVNTFLRSIVVILTMIFGFKTSWYSAYWGAIVHDAISLVLIRNLV*
B570J13884_1036072	3300001266	Freshwater	MDLWFFPTSNALLNTFLRSIVVILIMIFGFKTSWYSAYWGAIIHDTISLVLIRDLV*
GOS2227_10226632	3300001950	Marine	MDPLLFPTGNVLINTVLRSLILIAIMMLGFGTNLYVAYWGAVVHDTISLLLVYSYPLSAFAYKF*
JGI24028J26656_10013872	3300002091	Lentic	MDALFIPTSNLLVNTFLRSLVVIAVMILGFKTSWYVAYWGAVIHDTISLIIIYPMV*
JGI24218J26658_10009736	3300002092	Lentic	MVDVFLFPTKNVLINTFLRSIIVILVMILGFQSSWYEAYWGAVIHDAVSLFLVRSYIG*
G310J44882_1000134410	3300002933	Freshwater	MDVWFFPTSNVLLNTFLRSIVVILTMLFGFKTSWYAAYWGAIIHDTISLVLIRDLV*
JGI25910J50241_100309991	3300003388	Freshwater Lake	DLWFFPTSNALLNTFLRSIVVILIMIFGFKTSWYSAYWGAIIHDTISLVLIRDLV*
JGI25913J50563_10124791	3300003431	Freshwater Lake	MNFWLLPTTNALINTFLRSLVVIAVMILGFKTTWYSAYWGAVVHDAISLILIRDLV*
JGI25913J50563_10322412	3300003431	Freshwater Lake	MNTLLLPTSNVLLNTFLRSIVLILIMVFGFKSSWYSAYWGAIIHDTISLILVKDLV*
JGI25928J51866_10353141	3300003616	Freshwater Lake	MDLWFFPTSNALLNTFLRSIVVILIMIFGFKTSWYSAYWGAIIHDTIS
Ga0007856_10020403	3300003815	Freshwater	MDPFLFPTGNVLINTFLRSIVLILTMLFGFGTNLYAAYWGAIIHDTISLLYVHSYPLSAFSYKF*
Ga0065166_104453672	3300004112	Freshwater Lake	MNFWLIPTSNVLINTFLRSLVVIAVMILGLNTTWYSAYWGAVVHDAISLVLVRSYV*
Ga0066181_101205441	3300004123	Freshwater Lake	MDLWFFPTSNALLNTFLRSIVVILIMIFGFKTSWYSAYWGAIIHDTISLVLI
Ga0066182_100052462	3300004125	Freshwater Lake	MDFWLIPTANLLINTFLRSLIVIAVMILGFKTSWYSAYWGAVIHDAISLFLIKDLVH*
Ga0065168_10036122	3300004684	Freshwater	MESMDPFLFPTSNVLINTFLRSIVVIAVMILGLKTSWYSAYWGAVIHDAISLILVKSYPMTV*
Ga0065168_10075293	3300004684	Freshwater	MDPLLFPTSNVLINTVLRSIVLIIIMMFGFGTNLYAAYWGAVVHDTISLLLVYSYPLSAFAYKF*
Ga0065168_10090052	3300004684	Freshwater	MDIFLWPTSNVLINTFLRSIVVILAMILGFGTSWYEAYWGAVLHDAVSLFLVRSYV*
Ga0065177_10305652	3300004685	Freshwater	MESMDPFLFPTSNVLINTFLRSIIVIAVMILGLKTSWYSAYWGAVIHDAISLILVKSYPMTV*
Ga0065170_10040342	3300004694	Freshwater	MDPFLFPTSNVLINTFLRSIVVILVMIVGFQTSWYYAYWGAVVHDAISLVLVYSYI*
Ga0065170_10075104	3300004694	Freshwater	MNFWLLPTTNALINTFLRSLVVIAVMILGFKTSWYSAYWGAVVHDAISLILIRDLV*
Ga0007827_100027998	3300004777	Freshwater	MDAWFFPTSNPLVNTFLRSIVVILTMIFGFKTTWYAAYWGAIVHDAISLVLIRNLV*
Ga0007854_100009891	3300004806	Freshwater	FPTSNVLINTFLRSIIVILVMILGFQSSWYEAYWGAVIHDAISLFIVRSYIR*
Ga0076948_11153442	3300005739	Lake Water	MNFWLTPTPNVLINTFLRSLIVIAILIFTGYSWYVAYWGAVIHDAISLILVRPYV*
Ga0007881_10688411	3300006072	Freshwater	MDVFLWPTSNVLINTFLRSIVVILAMILGFGTSWYEAYWGAVLHDAVSLFLVR
Ga0007866_10025623	3300006119	Freshwater	MDPFLFPTGNVLINTFLRSIFLILTMLFGFGTNLYAAYWGAIIHDTISLLYVHSYPLSAFSYKF*
Ga0007805_10093852	3300006127	Freshwater	MDPFLFPTSNVLINTFLRSIVVIAVMILGLKTSWYSAYWGAVIHDAISLILVKSYPMTV*
Ga0075464_100360312	3300006805	Aqueous	MDIFFVPTSNVLINTFLRSIVVIAVMILGFERSWYEAYWGAVIHDAISLLLVKPYV*
Ga0075464_103274781	3300006805	Aqueous	MDIFFVPTQNVLINTFLRSILVIAVMILGFERSWYEAYWGAVIHDAISLLLVKPYV*
Ga0075464_103770792	3300006805	Aqueous	MDPLLFPTSNVLINTVLRSLVLIAIMMLGFGTNLYVAYWGAVVHDTISLLLVYSYPLSAFAYKF*
Ga0114973_1000000238	3300009068	Freshwater Lake	MDFWFLPTSNPLLNTFLRSIVVILAMIFGFKTSWYSAYWGAIVHDVISLILIRDLV*
Ga0114962_100067642	3300009151	Freshwater Lake	MDLWFFPTSNPLLNTFLRSIVVILTMIFGFKTSWYSAYWGAIIHDTISLVLIRDLV*
Ga0114980_100095183	3300009152	Freshwater Lake	MLSLLFRYPTSNLLINTFLRSIVVILVMIFGVQTSWYSAYWGAVIHDGISLILIQRYI*
Ga0114963_100056532	3300009154	Freshwater Lake	MEVLQIPTSNLLINTFLRSIVVIAIMILGFQTSWYQAYWGAILHDTVSLLIIAIKK*
Ga0114963_1000629011	3300009154	Freshwater Lake	MDAFFFPTSNLLVNTFLRSLVVIAAMILGFKTSWYAAYWGAVIHDAISLTLIYNIA*
Ga0114968_105066282	3300009155	Freshwater Lake	EAVFKFPTSNVLINTFLRSIVVIAVAILGFQSSWYVAYWSAVVHDAISLVLITPYL*
Ga0114970_104268472	3300009163	Freshwater Lake	MEAVFKFPTSNVLINTFLRSIVVIAVAILGFQSSWYVAYWSAVVHDAISLVLITPYL*
Ga0114975_100307853	3300009164	Freshwater Lake	MDPFLFPTGNVLINTFLRSIVVILVMILGFQSGWYYAYWGAVVHDAISLVLVYYYI*
Ga0114975_100770242	3300009164	Freshwater Lake	MDIFFVPTSNVLINTFLRSVVVIAVMILGFERSWYEAYWGAVIHDAISLLLVKPYV*
Ga0114975_103518342	3300009164	Freshwater Lake	MTNIWLVPTANPLLNTFLRSLIVMAIMILGFKTSWYSAYWAGIVHDIISLNLLRDIIDP*
Ga0114969_103348492	3300009181	Freshwater Lake	MLEMEAIFKVPTSNLLINTFLRSVVVIAIAILGFQSSWYTAYWSAVVHDGISLVLIRPYL
Ga0114974_107622912	3300009183	Freshwater Lake	MVDLWLFPTSNVLINTFLRSLVVIAVMILGLGTSWYAAYWGAVVHDAVSLVLVRSYV*
Ga0114976_103504521	3300009184	Freshwater Lake	MDIFFVPTSNVLINTFLRSVVVIAVMILGFERSWYEAYWEAVIHDAISLLLVKPYV*
Ga0114976_104104372	3300009184	Freshwater Lake	MDPLLFPTSNVLINTVLRSLVLIAIMMLGFGTNLYVAYWGAVVHDTISLLLVYSY
Ga0114982_100005039	3300009419	Deep Subsurface	MDVWGFPTSNLLINTFLRSIVVILIMLFGFKTTWYYAYWGAVIHDGISLFLIKDLV*
Ga0114982_10297402	3300009419	Deep Subsurface	MNPLLFPTSNVLINTFLRSIVLILLMVFGMGTTVYSAYWGAIVHDTISLILVRPYV*
Ga0114958_101169514	3300009684	Freshwater Lake	MDILFIPTSNLLINTFLRSIVVIAISILGFKTTWYSAYWAAIIHDAISLVVIRDMV*
Ga0114960_103839442	3300010158	Freshwater Lake	LFWKEEMETVFRFPTSNVLINTFLRSMVVIAIAILGFQSSWYVAYWSAVVHDAISLVLIMPYV*
Ga0136644_100171387	3300010334	Freshwater Lake	MDILFIPTPNLLINTFLRSIVVIVISILGFKTTWYSAYWGAIIHDAISLIIIRNVV*
Ga0136644_100487992	3300010334	Freshwater Lake	MDIFFVPTSNVLINTFLRSIVVIAVMILGFERSWYEAYWGAVIHDAISLLLVKSYV*
Ga0136644_105440021	3300010334	Freshwater Lake	IMDAFFFPTSNLLVNTFLRSLVVIAAMILGFKTSWYAAYWGAVIHDAISLTLIYNIA*
Ga0133913_100176782	3300010885	Freshwater Lake	MLEMETLFKFPTANLLINTFLRSIVVIAVAILGFQSSWHAAYWSAVIHDAISLVLIRPYL
Ga0133913_101492513	3300010885	Freshwater Lake	METVFRFPTSNVLINTFLRSMVVIAIAILGFQSSWYVAYWSAVVHDAISLVLIMPYV*
Ga0133913_103229742	3300010885	Freshwater Lake	MVNVFLFPTSNVLINTFLRSIIVILVMILGFQSSWYEAYWGAVIHDAISLFIVRSYIR*
Ga0133913_109331792	3300010885	Freshwater Lake	MDTVFKFPTSNVLINTFLRSMVVIAIAVLGFQSSWYVAYWSAVVHDAISLILIRPYL*
Ga0133913_120283193	3300010885	Freshwater Lake	MDILFIPTSNLLINTFLRSIVVIAISILGFKTTWYSAYWAAIIHDAISLFIIRKWWK*
Ga0129318_101202812	3300011009	Freshwater To Marine Saline Gradient	MNIWFFPTANVLINTVLRSLVLIALMVFGMGTTFYTAYWGAIVHDTISLILLYPYV*
Ga0151516_1010237	3300011116	Freshwater	MDAWFFPTSNVLVNTFLRSIIVILIMIFALKTTWYSAYWGAIVHDAVSLVLIRNLV*
Ga0164293_104104422	3300013004	Freshwater	MNAWLIPTSNVLINTFLRSLVVIAIMILGFKTSWYSAYWGAIIHDAISLVLVRGMV*
Ga0164292_100144847	3300013005	Freshwater	MLSPLFRYPTSNLLINTFLRSIVVILGMVLGLRMSWYSAYWGAVIHDGISLVLIQRYI*
Ga0164295_101696841	3300013014	Freshwater	LSPLFIYPTSNLLINTFLRSIVVILVMILGLKTSWYSAYWGAVIHDGISLILIQRYI*
Ga0164296_13226501	3300013093	Freshwater	MDPLLFPTSNVLINTVLRSLVLIAIMMLGVGPNLYVAYWGAVVHDTISLLMVYSYPVSAFAYKF*
Ga0136642_10072002	3300013285	Freshwater	MDPLLFPTSNVLINTVLRSIVLIVIMMYGFGTNLYIAYWGAVVHDTISLLLVYSYPLSAFAYKF*
Ga0187845_10005658	3300018815	Freshwater	MDPLLFPTSNVLINTVLRSIVLIIIMMFGFGTNLYVAYWGAVIHDTISLLLVYSYPLSAFAYKF
Ga0187844_100249394	3300018868	Freshwater	MNLWFVPTQNVLINTFLRSLIVIFLVIISGQSWYIAYWAAVVHDAISLILVHKYV
Ga0181359_10089215	3300019784	Freshwater Lake	MNFWLFPTANLLINTFLRSIVVIATMILGFKTTWYSAYWGAIVHDAISLVLIRDMV
Ga0181359_11476152	3300019784	Freshwater Lake	MDFWLIPTANLLINTFLRSLIVIAVMILGFKTSWYSAYWGAVIHDAISLFLIKDLVH
Ga0207193_11155262	3300020048	Freshwater Lake Sediment	MDLFLFPTGNVLINTFLRSIIVILVMILGFQSGWYYAYWGAVVHDAISLVLVYSYI
Ga0207909_10101232	3300020572	Freshwater	MDLWFLPTANPLLNTFLRSIVVILIMIFGFKTSWYSAYWGAIIHDVISLVLIRDLV
Ga0214250_10327442	3300020704	Freshwater	MDPFLFPTSNVLINTFLRSIIVILVMILGFQTSWYSAYWGAVVHDAISLILVYSYI
Ga0214217_10203241	3300020706	Freshwater	MDVWFFPTSNVLLNTFLRSIVVILTMLFGFKTSWYAAYWGAIIHDTISLVLIRDL
Ga0214207_10034462	3300020716	Freshwater	MDPFLFPTGNVLINTFLRSIVLILTMLFGFGTNLYAAYWGAIIHDTISLLYVHSYPLSAFSYKF
Ga0214204_10001202	3300021119	Freshwater	MDVWFFPTSNPLVNTFLRSIVVILTMIFGFKTSWYSAYWGAIVHDAISLVLIRNLV
Ga0214211_10270862	3300021125	Freshwater	TSNVLINTFLRSIIVILVMILGFQTSWYSAYWGAVVHDAISLILVYSYI
Ga0210307_13094702	3300021336	Estuarine	MDIFFVPTSNVLINTFLRSIVVIAVMILGFERSWYEAYWGAVIHDAISLLLVKPYV
Ga0194045_10461152	3300021516	Anoxic Zone Freshwater	MNLWLFPTANALINTFLRSIVVIATMILGFKTSWYSAYWGAIVHDAISLILIRNLV
Ga0194048_100027783	3300021519	Anoxic Zone Freshwater	MLSLLFRYPTSNLLINTFLRSVVVIAVMILGVKTSWYSAYWGAVIHDGISLILIQRYI
Ga0214917_101384893	3300022752	Freshwater	MDVFLVPTTNPLINTFLRSIVLILVMYFGFRTTFYTAYWGAVIHDAISLVIIRNLV
Ga0214921_10000038134	3300023174	Freshwater	MDLFLVPTQNVLINTFLRSIVVIAVMILGFQTSWYEAYWGAVLHDAISLFLVRTYM
Ga0214921_101602432	3300023174	Freshwater	MLEMEAIFKVPTSNLLINTFLRSVVVIAIAILGFQSSWYTAYWSAVIHDAISLVLIRPYL
Ga0214921_102184072	3300023174	Freshwater	MDTLFKFPTANLLVNTFLRSIVVIAVAILGFQSSWYAAYWSAVIHDAISLVLIRPYL
Ga0214923_1000035846	3300023179	Freshwater	MDILFIPTSNLLINTFLRSIVVIAISILGFKTTWYSAYWAAIIHDAISLFIIRKWWK
Ga0214919_1000008232	3300023184	Freshwater	MLEMDVLFKFPTANLLINTFLRSIVVIAVAILGFQSSWYAAYWSAVIHDAISLVLIRPYL
Ga0214919_1000021936	3300023184	Freshwater	MNWWLYPTQNALINTFLRSLVVIGALILSGQTWYSAYWAAVIHDAISLVLIRPYI
Ga0214919_102167221	3300023184	Freshwater	LYIPTANPLINTFLRSLVVIAIAKLLNNTWYVAYWSAVIHDAISLTIIGL
Ga0207957_10012771	3300025372	Freshwater	MNFWLLPTTNALINTFLRSLVVIAVMILGFKTSWYSAYW
Ga0207957_10349071	3300025372	Freshwater	MDPLLFPTSNVLINTVLRSIVLIIIMMFGFGTNLYAAYWGAVVHDTISLLLVYSYPLSAFAYKF
Ga0208250_10175091	3300025383	Freshwater	NVLINTFLRSIVVIAVMILGLKTSWYSAYWGAVIHDAISLILVKSYPMTV
Ga0207956_10032814	3300025385	Freshwater	MNFWLLPTTNALINTFLRSLVVIAVMILGFKTSWYSAYWGAVVHDAISLILIRDLV
Ga0208378_10084872	3300025407	Freshwater	MESMDPFLFPTSNVLINTFLRSIVVIAVMILGLKTSWYSAYWGAVIHDAISLILVKSYPMTV
Ga0208614_10064162	3300025413	Freshwater	MDIFLWPTSNVLINTFLRSIVVILAMILGFGTSWYEAYWGAVLHDAVSLFLVRSYV
Ga0208500_10084742	3300025429	Freshwater	FPTSNVLINTFLRSIVVILVMIVGFQTSWYYAYWGAVVHDAISLVLVYSYI
Ga0208500_10164673	3300025429	Freshwater	NALINTFLRSLVVIAVMILGFKTSWYSAYWGAVVHDAISLILIRDLV
Ga0208260_10506532	3300025467	Freshwater	ESMDPFLFPTSNVLINTFLRSIVVIAVMILGLKTSWYSAYWGAVIHDAISLILVKSYPMT
Ga0209553_10224774	3300027688	Freshwater Lake	MDLWFFPTSNALLNTFLRSIVVILIMIFGFKTSWYSAYWGAIIHDTISLVL
Ga0209188_10317942	3300027708	Freshwater Lake	MDLWFFPTSNPLLNTFLRSIVVILTMIFGFKTSWYSAYWGAIIHDTISLVLIRDLV
Ga0209599_1000018320	3300027710	Deep Subsurface	MDVWGFPTSNLLINTFLRSIVVILIMLFGFKTTWYYAYWGAVIHDGISLFLIKDLV
Ga0209599_100548851	3300027710	Deep Subsurface	MNPLLFPTSNVLINTFLRSIVLILLMVFGMGTTVYSAYWGAIVHDTISLILVRPYV
Ga0209499_100066911	3300027712	Freshwater Lake	MDIFFVPTSNVLINTFLRSIVVIAVMILGFERSWYEAYWGAVIHDAISLLLVKSYV
Ga0209499_11161123	3300027712	Freshwater Lake	MDILFIPTSNLLINTFLRSIVVIAISILGFKTTWYSAYWAAIIHDAISLVVIRDMV
Ga0209087_10805712	3300027734	Freshwater Lake	MLEMEALYKFPTTNLLINTFLRSIVVIAIAILGFKSSWYTAYWSAVIHDAISLFLIRPYL
Ga0209085_10043018	3300027741	Freshwater Lake	MEVLQIPTSNLLINTFLRSIVVIAIMILGFQTSWYQAYWGAILHDTVSLLIIAIKK
Ga0209597_100006926	3300027746	Freshwater Lake	MLEMDVLFKFPTANLLINTFLRSIVVIAVAILGFQSSWHAAYWSAVIHDAISLVLIRPYL
Ga0209189_13114662	3300027747	Freshwater Lake	MDILFIPTPNLLINTFLRSIVVIVISILGFKTTWYSAYWGAIIHDAISLIIIRNDV
Ga0209084_12458442	3300027749	Freshwater Lake	MDFLFLPTSNLLINTFLRSIVVIAVSILGFNTSWYSAYWAAIIHDVISLVVIYPIV
Ga0209444_103118362	3300027756	Freshwater Lake	SGKKMEAVFKVPTSNVLINTFLRSMVVIAIAVLGFQSSWYVAYWSAVVHDAISLILIRPY
Ga0209296_11011642	3300027759	Freshwater Lake	MDPLLFPTSNVLINTVLRSIVLIAIMMLGFGTNLYVAYWGAVVHDTISLLLVYSYPLSAFAYKF
Ga0209598_1000001235	3300027760	Freshwater Lake	MVDLWLFPTSNVLINTFLRSLVVIAVMILGFGTSWYAAYWGAVVHDAVSLVLVRSYV
Ga0209088_10000006149	3300027763	Freshwater Lake	MLSLLFRYPTSNLLINTFLRSIVVILVMIFGVKTSWYSAYWGAVIHDGISLILIQRYI
Ga0209134_100002714	3300027764	Freshwater Lake	MNFWLLPTTNALINTFLRSLVVIAVMILGFKTTWYSAYWGAVVHDAISLILIRDLV
Ga0209134_1000291510	3300027764	Freshwater Lake	MNTLLLPTSNVLLNTFLRSIVLILIMVFGFKSSWYSAYWGAIIHDTISLILVKDLV
Ga0209354_101863131	3300027808	Freshwater Lake	NALLNTFLRSIVVILIMIFGFKTSWYSAYWGAIIHDTISLVLIRDLV
Ga0209191_10043307	3300027969	Freshwater Lake	MNIWLIPTSNALINTFLRSLVVILFMILGLGTTWYSAYWGAVIHDAISLVLIYPLVK
Ga0209401_100000738	3300027971	Freshwater Lake	MDFWFLPTSNPLLNTFLRSIVVILAMIFGFKTSWYSAYWGAIVHDVISLILIRDLV
Ga0247723_11599482	3300028025	Deep Subsurface Sediment	DMDPLLFPTGNVLINTVLRSLILIAIMMLGFGTNLYVAYWGAVVHDTISLLLVYSYPLSAFAYKF
Ga0304728_12347081	3300028393	Freshwater Lake	VFRFPTSNVLINTFLRSMVVIAIAILGFQSSWYVAYWSAVVHDAISLVLIMPYV
Ga0316219_100099217	3300031759	Freshwater	MVNVFLFPTSNVLINTFLRSLIVILVMILGFHSSWYEAYWGAVIHDAISLFIVRSYIG
Ga0335024_0000079_33215_33391	3300034051	Freshwater	MLSPLFRYPTSNLLINTFLRSIVVILGMVLGLRMSWYSAYWGAVIHDGISLVLIQRYI
Ga0335035_0049349_1928_2095	3300034105	Freshwater	MNWWLYPTQNALINTFLRSLVVIAASVLSGQSWYIAYWAAVIHDAISLVLIRPYL
Ga0335061_0031092_2579_2755	3300034168	Freshwater	MVDVFLFPTSNVLINTFLRSIIVILVMIMGFQTSWYEAYWGAVIHDAISLFIVRSYIG
Ga0335061_0343621_3_158	3300034168	Freshwater	MDPLLFPTSNVLINTVLRSLVLIAIMMLGFGTNLYVAYWGAVVHDTISLLLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences