Metagenome / Metatranscriptome Family F072007

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072007
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	37 residues
Representative Sequence	MKKLLAMLALAVLITGCYAKESNKDYDKTEESKARRY
Number of Associated Samples	85
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.69 %
% of genes near scaffold ends (potentially truncated)	14.05 %
% of genes from short scaffolds (< 2000 bps)	87.60 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (28.099 % of family members)
Environment Ontology (ENVO)	Unclassified (80.165 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.215 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.77% β-sheet: 0.00% Coil/Unstructured: 49.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00106	adh_short	4.13
PF02321	OEP	3.31
PF00462	Glutaredoxin	2.48
PF05231	MASE1	1.65
PF13432	TPR_16	1.65
PF04964	Flp_Fap	0.83
PF12697	Abhydrolase_6	0.83
PF05930	Phage_AlpA	0.83
PF13463	HTH_27	0.83
PF01583	APS_kinase	0.83
PF04932	Wzy_C	0.83
PF00529	CusB_dom_1	0.83
PF00685	Sulfotransfer_1	0.83
PF05433	Rick_17kDa_Anti	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	6.61
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.65
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	1.65
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.65
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	0.83
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.83
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	56.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.45 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
uncultured marine bacterium 580	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	56.20 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	18.18 %
Unclassified	root	N/A	4.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
uncultured marine bacterium 580	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	56.20 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	18.18 %
Unclassified	root	N/A	4.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
uncultured marine bacterium 580	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	56.20 %
unclassified Nitrosomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales	16.53 %
Unclassified	root	N/A	4.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
uncultured marine bacterium 580	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	56.20 %
OM43 clade	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	16.53 %
Unclassified	root	N/A	4.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
uncultured marine bacterium 580	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	56.20 %
Methylophilales bacterium MBRS-H7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium MBRS-H7	4.96 %
Unclassified	root	N/A	4.13 %
Methylophilales bacterium HTCC2181	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10021286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3779	Open in IMG/M
3300000115\|DelMOSum2011_c10009140	All Organisms → cellular organisms → Bacteria → Proteobacteria	5369	Open in IMG/M
3300000115\|DelMOSum2011_c10009464	All Organisms → cellular organisms → Bacteria	5262	Open in IMG/M
3300000115\|DelMOSum2011_c10137854	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300000116\|DelMOSpr2010_c10247172	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	545	Open in IMG/M
3300000137\|LP_F_10_SI03_10DRAFT_c1021980	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300000153\|SI39nov09_135mDRAFT_c1009477	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	2391	Open in IMG/M
3300000167\|SI39nov09_120mDRAFT_c1015266	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300001346\|JGI20151J14362_10158507	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	667	Open in IMG/M
3300001348\|JGI20154J14316_10056516	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1596	Open in IMG/M
3300001348\|JGI20154J14316_10114654	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300001348\|JGI20154J14316_10125572	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	747	Open in IMG/M
3300001348\|JGI20154J14316_10148165	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	640	Open in IMG/M
3300001349\|JGI20160J14292_10141298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	770	Open in IMG/M
3300001352\|JGI20157J14317_10082914	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1242	Open in IMG/M
3300001352\|JGI20157J14317_10156539	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	702	Open in IMG/M
3300001354\|JGI20155J14468_10083762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1178	Open in IMG/M
3300001355\|JGI20158J14315_10205459	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300002226\|M1t6FKB2_1350478	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	512	Open in IMG/M
3300004277\|Ga0066611_10297266	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	537	Open in IMG/M
3300004279\|Ga0066605_10055402	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300007229\|Ga0075468_10054272	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300007863\|Ga0105744_1056244	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	970	Open in IMG/M
3300007863\|Ga0105744_1185204	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	522	Open in IMG/M
3300008956\|Ga0104261_1050652	Not Available	509	Open in IMG/M
3300008964\|Ga0102889_1209970	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	565	Open in IMG/M
3300008993\|Ga0104258_1022440	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1176	Open in IMG/M
3300009071\|Ga0115566_10267214	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1019	Open in IMG/M
3300009071\|Ga0115566_10267516	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1018	Open in IMG/M
3300009071\|Ga0115566_10441210	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	745	Open in IMG/M
3300009076\|Ga0115550_1146275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	829	Open in IMG/M
3300009076\|Ga0115550_1150687	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	813	Open in IMG/M
3300009076\|Ga0115550_1200003	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	673	Open in IMG/M
3300009076\|Ga0115550_1234977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	605	Open in IMG/M
3300009077\|Ga0115552_1269687	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	683	Open in IMG/M
3300009077\|Ga0115552_1399719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	542	Open in IMG/M
3300009080\|Ga0102815_10036829	All Organisms → cellular organisms → Bacteria → Proteobacteria	2694	Open in IMG/M
3300009193\|Ga0115551_1080370	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300009423\|Ga0115548_1180520	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	658	Open in IMG/M
3300009433\|Ga0115545_1326167	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	508	Open in IMG/M
3300009434\|Ga0115562_1078586	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300009436\|Ga0115008_10068852	All Organisms → cellular organisms → Bacteria	2690	Open in IMG/M
3300009437\|Ga0115556_1247074	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	635	Open in IMG/M
3300009442\|Ga0115563_1129203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1039	Open in IMG/M
3300009442\|Ga0115563_1351557	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	530	Open in IMG/M
3300009443\|Ga0115557_1338030	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	562	Open in IMG/M
3300009447\|Ga0115560_1378312	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	536	Open in IMG/M
3300009467\|Ga0115565_10096831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1396	Open in IMG/M
3300009476\|Ga0115555_1455195	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	507	Open in IMG/M
3300009496\|Ga0115570_10102886	Not Available	1393	Open in IMG/M
3300009496\|Ga0115570_10434717	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	555	Open in IMG/M
3300009497\|Ga0115569_10281036	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300009498\|Ga0115568_10395290	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	599	Open in IMG/M
3300009498\|Ga0115568_10451796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium MBRS-H7	552	Open in IMG/M
3300009505\|Ga0115564_10540266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium MBRS-H7	557	Open in IMG/M
3300009505\|Ga0115564_10576267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium MBRS-H7	534	Open in IMG/M
3300009507\|Ga0115572_10354199	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	826	Open in IMG/M
3300012524\|Ga0129331_1412747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	514	Open in IMG/M
3300014973\|Ga0134293_1044597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	517	Open in IMG/M
3300017697\|Ga0180120_10108325	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300017697\|Ga0180120_10305142	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300017697\|Ga0180120_10345893	Not Available	589	Open in IMG/M
3300017725\|Ga0181398_1120612	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	625	Open in IMG/M
3300017781\|Ga0181423_1221508	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	712	Open in IMG/M
3300020165\|Ga0206125_10128598	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1039	Open in IMG/M
3300020165\|Ga0206125_10135515	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1004	Open in IMG/M
3300020166\|Ga0206128_1119627	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1106	Open in IMG/M
3300020169\|Ga0206127_1004223	All Organisms → cellular organisms → Bacteria	12788	Open in IMG/M
3300020169\|Ga0206127_1043447	Not Available	2377	Open in IMG/M
3300020169\|Ga0206127_1174597	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	805	Open in IMG/M
3300020169\|Ga0206127_1205286	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	711	Open in IMG/M
3300020182\|Ga0206129_10273273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	696	Open in IMG/M
3300020185\|Ga0206131_10386115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium MBRS-H7	590	Open in IMG/M
3300020185\|Ga0206131_10458940	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	514	Open in IMG/M
3300020187\|Ga0206130_10047252	All Organisms → cellular organisms → Bacteria → Proteobacteria	3105	Open in IMG/M
3300020187\|Ga0206130_10161374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1149	Open in IMG/M
3300020187\|Ga0206130_10248622	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300020187\|Ga0206130_10339849	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	628	Open in IMG/M
3300020385\|Ga0211677_10134290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300020438\|Ga0211576_10318921	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	805	Open in IMG/M
3300020595\|Ga0206126_10288484	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	742	Open in IMG/M
3300021085\|Ga0206677_10231605	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	773	Open in IMG/M
3300021365\|Ga0206123_10089554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1489	Open in IMG/M
3300021365\|Ga0206123_10304035	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	678	Open in IMG/M
3300021365\|Ga0206123_10318032	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	658	Open in IMG/M
3300021365\|Ga0206123_10437865	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	532	Open in IMG/M
3300021957\|Ga0222717_10035466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3284	Open in IMG/M
3300021957\|Ga0222717_10055872	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	2547	Open in IMG/M
3300021957\|Ga0222717_10274194	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	972	Open in IMG/M
3300021957\|Ga0222717_10336230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium MBRS-H7	852	Open in IMG/M
(restricted) 3300022916\|Ga0233431_1250940	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	649	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10253737	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	840	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10262309	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	820	Open in IMG/M
3300024180\|Ga0228668_1086076	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	572	Open in IMG/M
3300024221\|Ga0228666_1005726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	3851	Open in IMG/M
3300024236\|Ga0228655_1107125	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
(restricted) 3300024243\|Ga0233436_1177494	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	616	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10461804	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	513	Open in IMG/M
3300024314\|Ga0228657_1088032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	629	Open in IMG/M
3300024314\|Ga0228657_1106059	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	556	Open in IMG/M
3300024322\|Ga0228656_1091380	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	655	Open in IMG/M
(restricted) 3300024327\|Ga0233434_1322567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium MBRS-H7	516	Open in IMG/M
3300024328\|Ga0228635_1032359	Not Available	1534	Open in IMG/M
3300024348\|Ga0244776_10510709	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	774	Open in IMG/M
3300025621\|Ga0209504_1071373	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	981	Open in IMG/M
3300025637\|Ga0209197_1096667	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	880	Open in IMG/M
3300025640\|Ga0209198_1103795	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	877	Open in IMG/M
3300025705\|Ga0209374_1060366	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300025809\|Ga0209199_1194921	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300025849\|Ga0209603_1216764	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	719	Open in IMG/M
3300025860\|Ga0209119_1105759	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1238	Open in IMG/M
3300025860\|Ga0209119_1174690	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	859	Open in IMG/M
3300025869\|Ga0209308_10084258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	1576	Open in IMG/M
3300025880\|Ga0209534_10286026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	767	Open in IMG/M
3300025886\|Ga0209632_10059918	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	2385	Open in IMG/M
3300026460\|Ga0247604_1054856	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	955	Open in IMG/M
3300026495\|Ga0247571_1123361	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	606	Open in IMG/M
3300027833\|Ga0209092_10058845	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300028416\|Ga0228614_1041376	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	1028	Open in IMG/M
3300028419\|Ga0228625_1080833	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	670	Open in IMG/M
3300031851\|Ga0315320_10429697	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580	908	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	43.80%
Coastal	Environmental → Aquatic → Marine → Coastal	15.70%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	15.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.44%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.79%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.96%
Inlet	Environmental → Aquatic → Marine → Inlet	4.96%
Strait	Environmental → Aquatic → Marine → Strait	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	43.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.70%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	15.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.44%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.96%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.31%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.48%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.65%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.83%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	28.10%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	15.70%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	11.57%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	9.09%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.96%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.13%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	4.13%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.31%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.48%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.48%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.48%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.65%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.65%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.65%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.65%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.65%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	1.65%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.83%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000137	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample F_10_SI03_10	Environmental	Open in IMG/M
3300000153	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 135m	Environmental	Open in IMG/M
3300000167	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 120m	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300002226	Marine microbial communities from the Baltic Sea - M1t6 FKB2 (106N)	Environmental	Open in IMG/M
3300004277	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_200m	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M
3300008956	Marine microbial communities from eastern North Pacific Ocean - P8 free-living McLane	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300008993	Marine microbial communities from eastern North Pacific Ocean - P1 free-living	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014973	Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0116 : 2 days incubation	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022916 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_200_MG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300024180	Seawater microbial communities from Monterey Bay, California, United States - 82D	Environmental	Open in IMG/M
3300024221	Seawater microbial communities from Monterey Bay, California, United States - 80D	Environmental	Open in IMG/M
3300024236	Seawater microbial communities from Monterey Bay, California, United States - 67D	Environmental	Open in IMG/M
3300024243 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_150_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024314	Seawater microbial communities from Monterey Bay, California, United States - 70D	Environmental	Open in IMG/M
3300024322	Seawater microbial communities from Monterey Bay, California, United States - 68D	Environmental	Open in IMG/M
3300024327 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_120_MG	Environmental	Open in IMG/M
3300024328	Seawater microbial communities from Monterey Bay, California, United States - 44D	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025621	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300026460	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 85R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026495	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 24R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028416	Seawater microbial communities from Monterey Bay, California, United States - 15D	Environmental	Open in IMG/M
3300028419	Seawater microbial communities from Monterey Bay, California, United States - 30D	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100212866	3300000101	Marine	MKKLLAILALAVLITGCYAKESNKDYDKTEEPKARRY*
DelMOSum2011_100091405	3300000115	Marine	MKKLLAMLALAVLITGCYAKESNKDYXKTEESNARRY*
DelMOSum2011_1000946412	3300000115	Marine	MKKLLAMLALAVLITGCYAKESNKDYDKTEESKARKY*
DelMOSum2011_101378542	3300000115	Marine	MKKLLAMLALAVLVTGCYAKESNKDYDKTEEPKARKY*
DelMOSpr2010_102471722	3300000116	Marine	LLAMLALAVLITGCYAKESNKDYDKTEESNARRY*
LP_F_10_SI03_10DRAFT_10219802	3300000137	Marine	MKKLLAMLALAVLIAGCYAKESNKDYDKTEESKARRY*
SI39nov09_135mDRAFT_10094771	3300000153	Marine	MKKLLAMLALAVLVTGCYAKESNKDYNKTEEPKARRY*
SI39nov09_120mDRAFT_10152662	3300000167	Marine	MKKLLAMLTLAVLVTGCYAKESNKDHNKTEEPKARRY*
JGI20151J14362_101585072	3300001346	Pelagic Marine	MKKLLAMLALAVLVTGCYAKESNKDYDKTEDSNARRY*
JGI20154J14316_100565163	3300001348	Pelagic Marine	MKKLLAMLALAVLVTRCYAKESNKDYDKTEDSNARRY*
JGI20154J14316_101146542	3300001348	Pelagic Marine	MNKLLAMLALAVLITGCYAKESNKDYDKTEDSNARRY*
JGI20154J14316_101255722	3300001348	Pelagic Marine	MKNLLAMLALAILVTGCYAKDSNKDYNKTEDSNARRY*
JGI20154J14316_101481653	3300001348	Pelagic Marine	MKKLLAMLALALLVTGCYAKESNKDYNKTEDSNARRY*
JGI20160J14292_101412981	3300001349	Pelagic Marine	MKKLLAMLALGILITGCYAKESNKDYDKTEEPKARRY*
JGI20157J14317_100829145	3300001352	Pelagic Marine	MKKLLAMLSLAVLVTGCYAKESNKDYKKTEDSNARRY*
JGI20157J14317_101565392	3300001352	Pelagic Marine	MKKLLAMLALAXLVTGCYAKXSNKDYNKTEDSNARRY*
JGI20155J14468_100837621	3300001354	Pelagic Marine	MKKLLAILALXILITGCYAKESNKDYDKTEEPKARRY*
JGI20158J14315_102054591	3300001355	Pelagic Marine	MKKLLAMLALAVLVSGCYAKESNNDYDKTEDSNARRY*
M1t6FKB2_13504781	3300002226	Marine	WMKKLLAMLALAILITGCYAKESNKDYDKTEEPKARRY*
Ga0066611_102972661	3300004277	Marine	MKKLLAMLALAVLVTGCYAKESNKDYDKTEDSNEEGIKIG*
Ga0066605_100554024	3300004279	Marine	MKKLLAMLALAILITGCYAKESNKDYDKTEDSNEEGIKIG*
Ga0075468_100542722	3300007229	Aqueous	MKKLLAMLALAILITGCYAKESNKDYDKTEEPKARRY*
Ga0105744_10562441	3300007863	Estuary Water	MKKLLAVLALAILITGCYAKDSNKDYDKTEESKARRY*
Ga0105744_11852042	3300007863	Estuary Water	MKKLLAILALAVLVTGCYAKESNKDYDKTEESNARRY*
Ga0104261_10506523	3300008956	Ocean Water	MKKLLAMFALAVLVTGCYAKESNKDYDKTEESKARKY*
Ga0102889_12099701	3300008964	Estuarine	MKKLLAMLALAVLVTGCYAKESNKDYDKTEESKARRY*
Ga0104258_10224401	3300008993	Ocean Water	KKLLAMLALAVLITGCYAKESNKDYDKTEESKARRY*
Ga0115566_102672144	3300009071	Pelagic Marine	MKKLLAMLALAILITGCYAKESNKDYEKTEEPKARRY*
Ga0115566_102675163	3300009071	Pelagic Marine	MKKLLAVLTLAILITGCYAKDSNKDYDKTEESKARRY*
Ga0115566_104412101	3300009071	Pelagic Marine	MKKLLAILALAFLIAGCYAKESNKDYDKTEDSNARRY*
Ga0115550_11462751	3300009076	Pelagic Marine	MKKLLAILALGILITGCYAKESNKDYDKTEEPKARRY*
Ga0115550_11506872	3300009076	Pelagic Marine	MKKLLAMLALAVLITGCYAKESNKDYDKTEDSNARRY*
Ga0115550_12000034	3300009076	Pelagic Marine	MKKLLAMFALAILVTGCYAKESNKDYDKTEESNARRY*
Ga0115550_12349772	3300009076	Pelagic Marine	MEKFLVMLALAVLVTGCYAKESSKDYDKTEDSNARRY*
Ga0115552_12696871	3300009077	Pelagic Marine	MKKLLAILALAVLIAGCYAKESNKDYDKTEDSNARRY*
Ga0115552_13997191	3300009077	Pelagic Marine	MKKLLSMLALAVLITGCYAKESNKDYGDTDEPKARRY*
Ga0102815_100368291	3300009080	Estuarine	MKKLLAMLALAVLITGCYAKESNKDYDKTEESNARRY*
Ga0115551_10803702	3300009193	Pelagic Marine	MKKLLAMLALAILITGCYAKESNKDYDKTEESKARRY*
Ga0115548_11805201	3300009423	Pelagic Marine	MKKLLAILALAVLITGCYAKESNKDYDKTEDSNARRY*
Ga0115545_13261671	3300009433	Pelagic Marine	MKKLLAMLALAILVTGCYAKESNKDYDKTEDSNARRY*
Ga0115562_10785864	3300009434	Pelagic Marine	KKLLAMLALAILITGCYAKESNKDYEKTEEPKARRY*
Ga0115008_100688524	3300009436	Marine	MKKLLAMLVLAVLITGCYAKESNKDYDKTEEPKARRY*
Ga0115556_12470744	3300009437	Pelagic Marine	LLAVLTLAILITGCYAKDSNKDYDKTEESKARRY*
Ga0115563_11292031	3300009442	Pelagic Marine	MKKLLAILALAVLITGCYAKESNKDYEKTEEPKARRY*
Ga0115563_13515571	3300009442	Pelagic Marine	MKKLLAMLALAVLVTGCYAKESNKDYNKTEDSNARRY*
Ga0115557_13380301	3300009443	Pelagic Marine	MKKLLAMLALAVLVTGCYAKESSKDYDKTEDSNARRY*
Ga0115560_13783121	3300009447	Pelagic Marine	MKKLLAVLALAILITGCYAKDSNKDYNKTEDSNARRY*
Ga0115565_100968312	3300009467	Pelagic Marine	MKKLLAILALAVLITGCYAKESNKDYDKTEEPKPRRY*
Ga0115555_14551951	3300009476	Pelagic Marine	MKKLLAMLALAILITGCYAKDSNKDYDKTEESKARRY*
Ga0115570_101028864	3300009496	Pelagic Marine	MKKLLAVLALAILITGCYAKESNKDYDKTEESKARRY*
Ga0115570_104347173	3300009496	Pelagic Marine	MKNLLAMLALAVLVTGCYAKDSNKDYNKTEDSNARRY*
Ga0115569_102810362	3300009497	Pelagic Marine	MKKLLAILALAVLITGCYAKESNKDYDKTEETKARRY*
Ga0115568_103952901	3300009498	Pelagic Marine	MKKLLAVFALAILITGCYAKDSNKDYDKTEESKARRY*
Ga0115568_104517962	3300009498	Pelagic Marine	MKKLLAMLALAVLVTGCYSKEPNKDYEKPEDSNARRY*
Ga0115564_105402661	3300009505	Pelagic Marine	MKKLLAILALAVLVTGCYAKESNKDYDKTEESKVRRY*
Ga0115564_105762672	3300009505	Pelagic Marine	MKKLLAMLTLAVLITGCYAKESNKDYDKTEETKARRY*
Ga0115572_103541991	3300009507	Pelagic Marine	KLLAMLALGILITGCYAKESNKDYEKTEEPKARRY*
Ga0129331_14127472	3300012524	Aqueous	MKKLLAILALAVLITGCYAKESNKDYDKTEEPKARKY*
Ga0134293_10445971	3300014973	Marine	MKKLLAILVLAVLITGCYAKESNKDYDKTEEPKARRY
Ga0180120_101083252	3300017697	Freshwater To Marine Saline Gradient	MKKLLAMLALAVLITGCYAKESNKDYDKTEESNARRY
Ga0180120_103051421	3300017697	Freshwater To Marine Saline Gradient	MKKLLAMLALAFLITGCYAKESNKDYDKTEESKARKY
Ga0180120_103458932	3300017697	Freshwater To Marine Saline Gradient	MKKLLAMLALAVLVTGCYAKESNKDYDKTEEPKAR
Ga0181398_11206121	3300017725	Seawater	MKKLLAMLAFAILITGCYAKESNKDYDKTEESKARRY
Ga0181423_12215081	3300017781	Seawater	KILAMLALAVLVTGCYAKESNKDYDKTEDSNARRY
Ga0206125_101285983	3300020165	Seawater	MKKLLAVLALAILITGCYAKDSNKDYDKTEESKARRY
Ga0206125_101355152	3300020165	Seawater	MKKLLAMLALAVLITGCYAKESNKDYDKTEESKARRY
Ga0206128_11196271	3300020166	Seawater	MKKLLAILALAVLIAGCYAKESNKDYDKTEDSNARRY
Ga0206127_10042235	3300020169	Seawater	MKKLLAMLALAILITGCYAKESNKDYEKTEEPKARRY
Ga0206127_10434474	3300020169	Seawater	MKKLLAILALAFLIAGCYAKESNKDYDKTEDSNARRY
Ga0206127_11745971	3300020169	Seawater	MKKLLAMLALAVLVTRCYAKESNKDYDKTEDSNARRY
Ga0206127_12052862	3300020169	Seawater	MKKLLAVLTLAILITGCYAKDSNKDYDKTEESKARRY
Ga0206129_102732731	3300020182	Seawater	MKKLLAMLALAILITGCYAKESNKDYDKSEESKARRY
Ga0206131_103861151	3300020185	Seawater	MKKLLAILALAVLITGCYAKESNKDYDKTEETKARRY
Ga0206131_104589401	3300020185	Seawater	MKKLLTILALAVLITGCYAKESNKDHDKTEESNARRY
Ga0206130_100472525	3300020187	Seawater	MKNLLAMLALAILVTGCYAKDSNKDYNKTEDSNARRY
Ga0206130_101613741	3300020187	Seawater	MKKLLAILALAVLVTGCYSKEPNKDYEKPEDSNARRY
Ga0206130_102486222	3300020187	Seawater	MKKLLAMLALAVLVTGCYAKESNKDYDKTEEPKARKY
Ga0206130_103398493	3300020187	Seawater	MKKLLAMFALAILVTGCYAKESNKDYDKTEDSNARRY
Ga0211677_101342903	3300020385	Marine	MKKLLAILVLAVLVTGCYAKESNKEYDKTEEPKARKY
Ga0211576_103189214	3300020438	Marine	MKKLLAMLALAVLVTGCYAKVSNKDYDKTEDSNARRY
Ga0206126_102884842	3300020595	Seawater	MKKLLAMLALAILITGCYAKESNKDYDKTEESKARRY
Ga0206677_102316052	3300021085	Seawater	MKKLLAMLALAVLVTGCYAKESNKGYDKTEDSNARRY
Ga0206123_100895541	3300021365	Seawater	MKKLLAMLALAILITGCYAKESNKDYDKTEEPKARRY
Ga0206123_103040351	3300021365	Seawater	MKKLLAMLALAVLVTGCYAKESNKDYDKTEDSNARRY
Ga0206123_103180323	3300021365	Seawater	MKKLLAMLALGILITGCYAKESNKDYEKTEEPKARRY
Ga0206123_104378651	3300021365	Seawater	KKVLAMLALAVLVTGCYAKESNKDYDKTEDSNARRY
Ga0222717_100354663	3300021957	Estuarine Water	MKMLLAMLAIAVLVTGCYAKESNKDYDKTEDSNARRY
Ga0222717_100558725	3300021957	Estuarine Water	MKKILAMLALAVLVTGCYAKESNKDYDKTEDSNARRY
Ga0222717_102741941	3300021957	Estuarine Water	MKKLLAMLALALLITGCYAKESNKDYDKTEESKARRY
Ga0222717_103362304	3300021957	Estuarine Water	MKKLLAMLALAVLITGCYTKESNKDYDKTEESKARRY
(restricted) Ga0233431_12509402	3300022916	Seawater	MKKLLAMLALAVLIAGCYAKESNKDYDKTEESKARRY
(restricted) Ga0233432_102537372	3300023109	Seawater	MKKLLAILILAVLVTGCYAKESNKDYDKTEDSNARRY
(restricted) Ga0233432_102623091	3300023109	Seawater	MKKLLAMLALAVLVTGCYAKDPNKDYNKTEDSNARRY
Ga0228668_10860761	3300024180	Seawater	MKKLLAMLALAVLVTGCYVKESNKDYNKTEDSNARRY
Ga0228666_10057266	3300024221	Seawater	MKKLLAMLALAVLVTGCYAKDSNKDYNKTEDSNARR
Ga0228655_11071252	3300024236	Seawater	MKKLLAMLALAILVTGCYAKESNKDYGNTDEPKARRY
(restricted) Ga0233436_11774942	3300024243	Seawater	VKKLLAMLALAVLIAGCYAKESNKDYDKTEESKARRY
(restricted) Ga0233444_104618041	3300024264	Seawater	MKRVLVMLALAVLVTGCYAKESNKDYDKTEDSNERRY
Ga0228657_10880322	3300024314	Seawater	MKKLLAMLALAMLITGCYTKESNKDYGNTEEPKARRY
Ga0228657_11060592	3300024314	Seawater	MKKLLAMLALALIITGCYAKESNKDYDKTEESKARRY
Ga0228656_10913801	3300024322	Seawater	MKKLLAILALAVLVTGCYAKESNKDYDKTEDSNARRY
(restricted) Ga0233434_13225671	3300024327	Seawater	MKKLLAMLTLAVLVTGCYAKESNKDHNKTEEPKARRY
Ga0228635_10323591	3300024328	Seawater	MKKLLAMLALATLITGCYAKESNKDYDKTEESKARRY
Ga0244776_105107091	3300024348	Estuarine	KKLLAMLALAVLIAGCYAKESNKDYDKTEESKARRY
Ga0209504_10713734	3300025621	Pelagic Marine	KLLAMLSLAVLVTGCYAKESNKDYNKTEDSNARRY
Ga0209197_10966673	3300025637	Pelagic Marine	MKKLLAMLALAVLVTGCYAKESNKDYNKTEDSNARRY
Ga0209198_11037952	3300025640	Pelagic Marine	MKKLLAMLALAVLITGCYAKEPNKDYDKTEESKARRY
Ga0209374_10603664	3300025705	Marine	KKLLAMLALAVLVTGCYAKESNKDYDKTEDSNARRY
Ga0209199_11949212	3300025809	Pelagic Marine	MNKLLAMLALAVLITGCYAKESNKDYDKTEDSNARRY
Ga0209603_12167641	3300025849	Pelagic Marine	KLLAMLALGILITGCYAKESNKDYEKTEEPKARRY
Ga0209119_11057591	3300025860	Pelagic Marine	MKKLLAMLALAVLITGCYAKESNKDYDKTEDSNARRY
Ga0209119_11746904	3300025860	Pelagic Marine	MEKFLVMLALAVLVTGCYAKESSKDYDKTEDSNARRY
Ga0209308_100842581	3300025869	Pelagic Marine	MKKLLAMLALGILITGCYAKESNKDYDKTEEPKARRY
Ga0209534_102860261	3300025880	Pelagic Marine	MKKLLAMLVLAFLITGCYLKESNKDYDKTEEPKARRY
Ga0209632_100599181	3300025886	Pelagic Marine	MKNLLAMLALAVLVTGCYAKDSNKDYNKTEDSNARRY
Ga0247604_10548564	3300026460	Seawater	MKKFLAMLAFAILITGCYAKESNKDYDKTEESKARRY
Ga0247571_11233611	3300026495	Seawater	MKKLLAMLALAVLVTGCYVKESNKDYDKTEDSNARRY
Ga0209092_100588452	3300027833	Marine	MKKLLAMLVLAVLITGCYAKESNKDYDKTEEPKARRY
Ga0228614_10413761	3300028416	Seawater	MKKLLAMLALDLLITGCYAKESNKDYDKTEESKARRY
Ga0228625_10808331	3300028419	Seawater	KKLLAMLALALLITGCYAKESNKDYDKTEESKARRY
Ga0315320_104296972	3300031851	Seawater	MKKLLAMLALAVLVTGCYAKESNKDYNKTEDSNAGRY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters