Metagenome / Metatranscriptome Family F071597

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071597
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	48 residues
Representative Sequence	MTAILVRFPNESVKLDDVEEHRVLTKLEVIYEGGSLHGKTADFPTR
Number of Associated Samples	109
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.47 %
% of genes near scaffold ends (potentially truncated)	94.26 %
% of genes from short scaffolds (< 2000 bps)	91.80 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.180 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.934 % of family members)
Environment Ontology (ENVO)	Unclassified (31.967 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.705 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.05% β-sheet: 27.03% Coil/Unstructured: 68.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF13884	Peptidase_S74	1.64
PF00781	DAGK_cat	0.82
PF01699	Na_Ca_ex	0.82
PF00027	cNMP_binding	0.82
PF00582	Usp	0.82
PF02371	Transposase_20	0.82
PF13474	SnoaL_3	0.82
PF08281	Sigma70_r4_2	0.82
PF07485	DUF1529	0.82
PF08447	PAS_3	0.82
PF17200	sCache_2	0.82
PF00696	AA_kinase	0.82
PF01427	Peptidase_M15	0.82
PF04519	Bactofilin	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.64
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.82
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.82
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.82
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.18 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.18 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.18 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	90.98 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	90.98 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	71.31 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.64 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.31 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.64 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.31 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.64 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.31 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.64 %
Unclassified	root	N/A	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.31 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.64 %
Unclassified	root	N/A	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2044078002\|MGR_F548DK201CZ84E	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
2065487018\|GPINP_F5MS3JC02GVC8Q	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
2088090014\|GPIPI_17450546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1067	Open in IMG/M
2170459003\|FZ032L002F02OE	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	518	Open in IMG/M
2170459008\|GA8OVOZ02JLJG2	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300000890\|JGI11643J12802_10459090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1618	Open in IMG/M
3300002899\|JGIcombinedJ43975_10083063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300005172\|Ga0066683_10356379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	908	Open in IMG/M
3300005179\|Ga0066684_10097617	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1794	Open in IMG/M
3300005293\|Ga0065715_10006651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4860	Open in IMG/M
3300005294\|Ga0065705_10295699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1066	Open in IMG/M
3300005295\|Ga0065707_10869081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	576	Open in IMG/M
3300005335\|Ga0070666_11373668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300005343\|Ga0070687_100544136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300005354\|Ga0070675_100773614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	877	Open in IMG/M
3300005365\|Ga0070688_100367102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1058	Open in IMG/M
3300005436\|Ga0070713_100959843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	824	Open in IMG/M
3300005446\|Ga0066686_10676931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300005451\|Ga0066681_10640298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	652	Open in IMG/M
3300005459\|Ga0068867_102389627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300005526\|Ga0073909_10430667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300005543\|Ga0070672_100918092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	774	Open in IMG/M
3300005543\|Ga0070672_102041051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300005561\|Ga0066699_11121960	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300005563\|Ga0068855_100897124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	937	Open in IMG/M
3300005834\|Ga0068851_11084409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300006028\|Ga0070717_10251509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1561	Open in IMG/M
3300006046\|Ga0066652_100064677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2820	Open in IMG/M
3300006172\|Ga0075018_10749951	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300006173\|Ga0070716_100838394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300006175\|Ga0070712_100756566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300006175\|Ga0070712_101977741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	510	Open in IMG/M
3300006871\|Ga0075434_101003474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	849	Open in IMG/M
3300006871\|Ga0075434_101208857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300006954\|Ga0079219_10804190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300009177\|Ga0105248_11003281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	943	Open in IMG/M
3300009553\|Ga0105249_11599871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300010326\|Ga0134065_10445251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300010373\|Ga0134128_12443690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300010401\|Ga0134121_10536746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1084	Open in IMG/M
3300011119\|Ga0105246_10607291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	946	Open in IMG/M
3300011270\|Ga0137391_11252219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300012198\|Ga0137364_11041369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300012207\|Ga0137381_10766090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	837	Open in IMG/M
3300012211\|Ga0137377_11172183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300012349\|Ga0137387_10578610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	814	Open in IMG/M
3300012356\|Ga0137371_10681113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300012582\|Ga0137358_10157008	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300012683\|Ga0137398_10056146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2353	Open in IMG/M
3300012902\|Ga0157291_10191972	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300012906\|Ga0157295_10021219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1301	Open in IMG/M
3300012913\|Ga0157298_10405135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	520	Open in IMG/M
3300012955\|Ga0164298_11245011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300012957\|Ga0164303_11084113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300013307\|Ga0157372_12631072	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300014157\|Ga0134078_10660429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300015077\|Ga0173483_10796812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300015201\|Ga0173478_10821425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300015372\|Ga0132256_100287468	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300015373\|Ga0132257_104532724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300018072\|Ga0184635_10290695	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300018081\|Ga0184625_10066214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1829	Open in IMG/M
3300018433\|Ga0066667_10533138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	972	Open in IMG/M
3300019882\|Ga0193713_1053367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1160	Open in IMG/M
3300019885\|Ga0193747_1000911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	8569	Open in IMG/M
3300020000\|Ga0193692_1044225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1018	Open in IMG/M
3300020010\|Ga0193749_1090519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300020070\|Ga0206356_10325756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300021344\|Ga0193719_10008050	All Organisms → cellular organisms → Bacteria	4384	Open in IMG/M
3300022694\|Ga0222623_10132278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	972	Open in IMG/M
3300024181\|Ga0247693_1066727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300024222\|Ga0247691_1054941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300025905\|Ga0207685_10148790	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300025915\|Ga0207693_10520455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	928	Open in IMG/M
3300025922\|Ga0207646_10160425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2029	Open in IMG/M
3300025932\|Ga0207690_11825877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300025939\|Ga0207665_10865444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300025939\|Ga0207665_11322550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300025941\|Ga0207711_10593805	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300025942\|Ga0207689_10110046	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300025972\|Ga0207668_11120279	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300026035\|Ga0207703_12362533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300026041\|Ga0207639_11509214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300026328\|Ga0209802_1287127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300026343\|Ga0209159_1154618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	885	Open in IMG/M
3300026494\|Ga0257159_1046593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300026523\|Ga0209808_1139569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300026523\|Ga0209808_1279152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300026547\|Ga0209156_10290753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	741	Open in IMG/M
3300026548\|Ga0209161_10087910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1905	Open in IMG/M
3300026551\|Ga0209648_10046374	All Organisms → cellular organisms → Bacteria	3742	Open in IMG/M
3300026867\|Ga0207475_1003178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	923	Open in IMG/M
3300027460\|Ga0207506_1010566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300028293\|Ga0247662_1062818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300030848\|Ga0075388_11685392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	946	Open in IMG/M
3300030855\|Ga0075374_11441361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	932	Open in IMG/M
3300030855\|Ga0075374_11441684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300030923\|Ga0138296_1452653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	571	Open in IMG/M
3300030973\|Ga0075395_11012889	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	637	Open in IMG/M
3300030990\|Ga0308178_1130615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300031057\|Ga0170834_101914853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1394	Open in IMG/M
3300031057\|Ga0170834_107893881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	983	Open in IMG/M
3300031128\|Ga0170823_12104698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	561	Open in IMG/M
3300031231\|Ga0170824_101749550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300031231\|Ga0170824_103600802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300031231\|Ga0170824_120564295	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300031231\|Ga0170824_123475789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300031231\|Ga0170824_127298211	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1281	Open in IMG/M
3300031474\|Ga0170818_107273924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300031716\|Ga0310813_10244011	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300031716\|Ga0310813_12321792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300031720\|Ga0307469_10755165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300031740\|Ga0307468_101932880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300031754\|Ga0307475_10139998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1916	Open in IMG/M
3300031754\|Ga0307475_10197358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1608	Open in IMG/M
3300031938\|Ga0308175_102127081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300031962\|Ga0307479_11406552	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300032000\|Ga0310903_10543514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300032205\|Ga0307472_102355944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300033412\|Ga0310810_10113688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3209	Open in IMG/M
3300033475\|Ga0310811_11179551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.15%
Host-Associated	Host-Associated	18.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.87%
Plants	Host-Associated → Plants	18.85%
Aquatic	Environmental → Aquatic	3.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.38%
Sediment	Environmental → Aquatic → Sediment	3.28%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.03%
Loam	Environmental → Terrestrial → Soil → Loam	9.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.82%
Switchgrass, Maize And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass, Maize And Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2044078002	Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL	Host-Associated	Open in IMG/M
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459008	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026867	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-12 (SPAdes)	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MGR_293780	2044078002	Switchgrass, Maize And Miscanthus Rhizosphere	MTAIAVRFPDESVELDNVEEHRVLTTLEVIYEGGSL
GPINP_00905680	2065487018	Soil	MTAIAVQFPDQSVELDNVEERRVLTALEVIYKGDCLHGKTADFPTRDLERVVVGLHLRN
GPIPI_03116850	2088090014	Soil	MTAIAVRFPDESVELDNVEERRSLTTLEVIYEGGSLHGKTADFPTRDV
E4A_07170950	2170459003	Grass Soil	MTAILAQFPDESVKLDDVEERKVLTTLEVIYEGGSLHGKTADFPTRDLERFVVGVHRRNW
F48_00337810	2170459008	Grass Soil	MTPIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHV
JGI11643J12802_104590906	3300000890	Soil	MTAILVQSPVESVKRDNVDEHRVLTDLEVMYDGGSLHGKTADFP
JGIcombinedJ43975_100830631	3300002899	Soil	MTAILARFPDESVNLDDVEERTVLTALEVIYEGGSLHGKTAAFG*
Ga0066683_103563791	3300005172	Soil	MTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVL
Ga0066684_100976171	3300005179	Soil	MTAIAVRFPDESVELDDVEERRVLTTLEVIYEGGSLHGKAADFPTRDVVRVVVGLHLPNW
Ga0065715_100066511	3300005293	Miscanthus Rhizosphere	MIAILVRFPNESVKFDDVGERRVLTTLGVIYEGGSLHGKTADFPTRDLERLVVGVHRRTSHFF
Ga0065705_102956993	3300005294	Switchgrass Rhizosphere	MSMTAILARFPDESVKLDDVEERNVLTTFEVIYEGGSLHGKTADFPTRDLERFVV
Ga0065707_108690811	3300005295	Switchgrass Rhizosphere	MTAITVRIPDESVELDNVEERRVLTALEVIYEGGCLHGKTADFPTRDL
Ga0070666_113736682	3300005335	Switchgrass Rhizosphere	MTAIAIRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADF
Ga0070687_1005441363	3300005343	Switchgrass Rhizosphere	MIAILVRFPNESVKFDDVEERRVLTTLEVIYEGGSFHGKTADFPTRDLDRLVAGVH
Ga0070675_1007736141	3300005354	Miscanthus Rhizosphere	MTAILVRFPDESVKLDDVEKRRILTTLEVIYEGGSLHGKTADFPT
Ga0070688_1003671022	3300005365	Switchgrass Rhizosphere	MTAILVQFPNESVEVDDVEKHRVLTALEVIYEGGSLHGKTADFPTRDLERLVVGVHER
Ga0070713_1009598431	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LSISTMTAILVRFPDESVKLDDVERRRILTTLEVIYEGGSLHGKTADFPT
Ga0066686_106769311	3300005446	Soil	MTAILVRFPDESVKFDDVEKRRILTTLEVIYEGGSLHGKTADF
Ga0066681_106402982	3300005451	Soil	MSVATIEVRFPDKFLKPDDVEERRVLTTLEVIYEGGSLHGKTADFPTRD
Ga0068867_1023896271	3300005459	Miscanthus Rhizosphere	MTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLE
Ga0073909_104306671	3300005526	Surface Soil	MTAILVRFPNESVKLDDVEEHRVLTKLEVIYEGGSLHGKTADFPTR
Ga0070672_1009180922	3300005543	Miscanthus Rhizosphere	MTAILVQFPNESVEVDDVEKHRVLTALEVIYEGGSLH
Ga0070672_1020410511	3300005543	Miscanthus Rhizosphere	MTAIEIRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRD
Ga0066699_111219602	3300005561	Soil	MSLTTIPVRFPDESVELDDVEERRVLTTLEVIYEGGSLHRKTADFPTRDVERVVV
Ga0068855_1008971244	3300005563	Corn Rhizosphere	MTAILVRFPNETVKLDCVEKRRVLTTLAVIYEGGSLHGKTADFPTRD
Ga0068851_110844092	3300005834	Corn Rhizosphere	MTAIVTQFPDEFVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVERVVVGLHLPDWHFF
Ga0070717_102515091	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTAITVRIPDESVELDNVEERRVLTALEVIYEGGCLHGKTADFPTRDLERVVVGL
Ga0066652_1000646775	3300006046	Soil	MTAIAIRFPDESVELDDVEERRVLTTLEVIYEGGLLH
Ga0075018_107499512	3300006172	Watersheds	MTAITVRIPDESVELDNVEERRVLTALEVIYEGGLLHGKTADFPTRDLER
Ga0070716_1008383941	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LSISTMTAILVRFPDESVKLDDVERRRILTTLEVIYEGGSLHGKTADF
Ga0070712_1007565661	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LSISTMTAILVRFPDESVKLDDVERRRILTTLEVIYEGGSLHGK
Ga0070712_1019777411	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIAITVRIPDESVELDNVEERRVLTALEVIYEGGCLHGKTADFPTRDLERVVVGLHVRNW
Ga0075434_1010034741	3300006871	Populus Rhizosphere	MTAIPVQFPDESVKLDDLEEGRVLTALEVMYEGGSLHGK
Ga0075434_1012088571	3300006871	Populus Rhizosphere	MIAILVRFPNESVKFDDVGERRVLTTLGVIYEGGSLHGKTADFPTRD
Ga0079219_108041901	3300006954	Agricultural Soil	MTAITVRIPDESVELDNVEERRVLTALEVIYEGGCLHGKTADFPTRDLERVVVGLHL
Ga0105248_110032812	3300009177	Switchgrass Rhizosphere	MTAILVRFPDESIKLDDVEEQRVLTTLEVIYEGGSLH
Ga0105249_115998711	3300009553	Switchgrass Rhizosphere	MTAILVQFPNESVEVDDVEKHRVLTALEVIYEGGSLHGKTA
Ga0134065_104452512	3300010326	Grasslands Soil	MTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPS
Ga0134128_124436901	3300010373	Terrestrial Soil	MTAILVQFPNESVEVDNVEKHRVLTALEVIYEGGSLHGKTADFPTRDL
Ga0126381_1040538941	3300010376	Tropical Forest Soil	MSMRAIEAQFTDEPVKLDNAKERRVLTALKMIYEGGSLD
Ga0134121_105367463	3300010401	Terrestrial Soil	MTAITVRIPDESVELDNVEERRVLTALEVIYEGGCLHGKTADFPTR
Ga0105246_106072912	3300011119	Miscanthus Rhizosphere	MTAIVVRLPDESVKLDNVEERRVLTDLEVIYEDGMLHGKTQNFPTRDLERVVVG
Ga0137391_112522191	3300011270	Vadose Zone Soil	MTAIAVRFPDESVELDNVEERRVLTALEVIYEGGWFDGKTADFPTRDLERVVLGLHLR
Ga0137364_110413693	3300012198	Vadose Zone Soil	MSLAAIEVRFPDKILKPDDVERRRVLSTLEVMYEGGSLHGTTDDFPTRDLS
Ga0137381_107660903	3300012207	Vadose Zone Soil	MSVAAIEVRFPDKFLKPEDVEERRVLTTLEVIYEGGSLHGKTADFPTRDP
Ga0137377_111721833	3300012211	Vadose Zone Soil	MTAILVRFPDESVKLDDVEERRILTALEVIYEGGL
Ga0137387_105786101	3300012349	Vadose Zone Soil	MSVATIEVRFPDKFLKPDDVEERRVLTTLEVIYEGGSLH
Ga0137371_106811133	3300012356	Vadose Zone Soil	FNMTAILVRFPDESVKLDDVEKRRILTTLEVIYEGGSLHG*
Ga0137358_101570081	3300012582	Vadose Zone Soil	MTAITVRIPDESVELDNVEERRVLTALEVIYEGGWFDGKTADFPTRDL
Ga0137398_100561465	3300012683	Vadose Zone Soil	MSLTAIAVRFPDEPVKLDNVEERRVLTALEVIYEGGSLHGKTADFPTRDLERVVAGLHL
Ga0157291_101919721	3300012902	Soil	MTAIVTQFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVE
Ga0157295_100212191	3300012906	Soil	MTAILVRFPNESVKLDCVEKRRVLTTLAVIYEGGSLHGKTADFPTRDLERLVIG
Ga0157298_104051352	3300012913	Soil	SMTAIAVQFPDESVELDNVEEHRVLTVLEVIYEGGSLHGKTADFPTRDVERVVVRPPPA*
Ga0164298_112450112	3300012955	Soil	MTAILVRFQNESVKFDDVEERRVLTTLGVIYEGGSLHGKT
Ga0164303_110841131	3300012957	Soil	MTAIAVRFPDESVELDNVEEHRVLTTLEVIYEGGWLHGKTADFPTRDLDRVVVGLHLPNW
Ga0157372_126310722	3300013307	Corn Rhizosphere	MTAIVVRLPDESVKLDNVEERRVLTDLEVIYEDGMLHGKTQN
Ga0134078_106604292	3300014157	Grasslands Soil	MSLTIPVRFPDESVELDNLEERRVLTDLEVIYEGGLLHG
Ga0173483_107968122	3300015077	Soil	MTAIPVQFPDESVKLDDVEENRVLTALEVMYEGGSLHGKTADFPSRDL
Ga0173478_108214251	3300015201	Soil	MTAIAVRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVERVVVRPPPA*
Ga0132256_1002874683	3300015372	Arabidopsis Rhizosphere	MTAILVRFPDESIKLDDVEKHEVLTTLEVIYDGGSLHSKTADFPT
Ga0132257_1045327241	3300015373	Arabidopsis Rhizosphere	MTAILVRFPNESVKLDDVEEHRVLTKLEVIYEGGSLHGKTADFPT
Ga0184635_102906951	3300018072	Groundwater Sediment	VTAIAVRFPDESVELDNVEERRVLTALEVIYEGGSLHGKTADFPTRDLERV
Ga0184625_100662145	3300018081	Groundwater Sediment	MSLTAITVQFPDESVELDNVKERRVLTTLKMMYEGGSLDGKTANFPTR
Ga0066667_105331382	3300018433	Grasslands Soil	MSLTAIAVRFPDEPVKLDNVEERRVLTALEVIYEGGSLHGKTAD
Ga0193713_10533672	3300019882	Soil	MTAIAVRFPDESVELDNVEERRFLTTLEVIYEGGSLHGKTADFPTRDV
Ga0193747_10009112	3300019885	Soil	MTAIAVRFPDESVELDNVEERRFLTTLEVIYEGGSLHGKTAYFPTRDV
Ga0193692_10442253	3300020000	Soil	MTAILVQFPNESFKPHDVEERRVLTTLGVIYEGGSLHGKTADFPRRDVERLVAGVHRRTS
Ga0193749_10905191	3300020010	Soil	MSLTAIAIRFPDESVELDNVEERRVLTALEVIYEGGSLHGKTADFP
Ga0206356_103257561	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTAIEIRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVERV
Ga0193719_100080507	3300021344	Soil	MSLTAIAVRFPDESVKLDNVEEHRVLTDLEVIYEGGLLHGETADFPTRDLERVVVGL
Ga0222623_101322782	3300022694	Groundwater Sediment	MTAIAIRFPDESVNLDNVEEHRVLTDLEVIYEGGLLHGETADFPTRDLERVVVGLHRRNWHF
Ga0247693_10667271	3300024181	Soil	MTAITVRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVERVVVGL
Ga0247691_10549411	3300024222	Soil	MTAITVRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVEH
Ga0207685_101487901	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTAIAIRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVERVVIGLHLPSWHFF
Ga0207693_105204552	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTAILVRFPDESVKLDDVERRRILTTLEVIYEGGSLHGKTADFPTRDLD
Ga0207646_101604254	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRFPDESVKLDDVEERRVLTALEVIHEGGSLHGKTADFG
Ga0207690_118258771	3300025932	Corn Rhizosphere	MTAILFQFKNESVEVDDVEKHRVLTALEVIYEGGSLHGKTADFPTRDLERLVVG
Ga0207665_108654443	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTAILVRFPDESVKLDDVERRRILTTLEVIYEGGSLHGKTADF
Ga0207665_113225501	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTAIAVRFPDECVKLDNVEERRVLTDLEVIYEGGSLHGETADFPSRYLE
Ga0207711_105938051	3300025941	Switchgrass Rhizosphere	MIAILVRFPNESVKFDDVGERRVLTTLGVIYEGGSLHGKTADFPTRDLERLV
Ga0207689_101100461	3300025942	Miscanthus Rhizosphere	MSMTAILARFPDESVKLHDVQERRVLTTLEVIYEGGSLHGK
Ga0207668_111202792	3300025972	Switchgrass Rhizosphere	MTAILVRFQNESVKFDDVEERRVLTTLGVIYEGGSLHGKTAD
Ga0207703_123625331	3300026035	Switchgrass Rhizosphere	MTAIEIRFPDESVELDNVEEHRVLTTLEVIYEGGSLHG
Ga0207639_115092143	3300026041	Corn Rhizosphere	MTAIEIRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPT
Ga0209802_12871271	3300026328	Soil	MSLTTIPVRFPDESVKLDNVEERRVLTALEVIYEGGSLHGKTADFPT
Ga0209159_11546183	3300026343	Soil	MTAILVRFPDESVKFDDVEKRRILTTLEVIYEGGSLHGKTADFPTRDLD
Ga0257159_10465931	3300026494	Soil	MSLTAIAIRFPDESVELDNVEERRVLTALEVIYEGGSLHGKTADFPTRDLERVVAGLH
Ga0209808_11395692	3300026523	Soil	MSLTAIAVRFPDEPVKLDNVEERRVLTALEVIYEGGSLHGKTA
Ga0209808_12791522	3300026523	Soil	MSVAAIEVRFPDKFLKPDDVEERRVLTTLEVIYEGGSLHGKTADFP
Ga0209156_102907531	3300026547	Soil	MTAILVRFPDESVKLDDVEKRGILTTLEVIYEGGSLHGKTAD
Ga0209161_100879101	3300026548	Soil	MTAILVRFPDESVKLDDVEKRRILTTLEVIYEGGSLHGKSADFPTRDLDRL
Ga0209648_100463741	3300026551	Grasslands Soil	MTAITARIPDESVELDNVEERRDLTALDVIYEGGCLHGKTADFP
Ga0207475_10031781	3300026867	Soil	MTAITVRIPDESVELDNVEERRVLTALEVIYEGGCLHGKTADFPTRDVERVVVRPPPA
Ga0207506_10105662	3300027460	Soil	MTAITVRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVER
Ga0247662_10628181	3300028293	Soil	MTATAVRFPDECVKLDNVEERRVLTDLEVIYEGGSLHG
Ga0075388_116853923	3300030848	Soil	MTAILVRFPDESVKLDDVEEPRVLTTLEVIYEGGSLHSKTADFATRDLERLVVGVHGGNW
Ga0075374_114413611	3300030855	Soil	MTAIAVRFPDESVELDDVEERKVLTTLEVIYEGGSLHSKTADFP
Ga0075374_114416841	3300030855	Soil	MTAILVRFPDESVKLDDVEEPRVLTTLEVIYEGGSLHSKTADF
Ga0138296_14526531	3300030923	Soil	MSMAAILARFPDESVQLDDVEERKVLTTLEVIYEGGSLHGKTADF
Ga0075395_110128892	3300030973	Soil	MSMTAILARFPDESLKLDDVEEHRVLTTLEVVYEGGSLHGKTADFPTRD
Ga0308178_11306153	3300030990	Soil	MTAILLQFPNESVKSDDVEERRVLTTLGVIYEGGSI
Ga0170834_1019148531	3300031057	Forest Soil	MTAITVRIPDESVELDNVEERRVLTTLKMIYEGGSLDGKTANFSTRDLSCVVV
Ga0170834_1078938811	3300031057	Forest Soil	MSTAILVQFPDESVKLDGVEERRVLTALEVMYEGGSLHGKTADFPSRDLERVVAG
Ga0170823_121046981	3300031128	Forest Soil	MTPLLVRFPDKSVKLDDVEEPRVLTALEVIYEGGSLHGKTADLPSRDLERVVLRV
Ga0170824_1017495501	3300031231	Forest Soil	MTAILVRFPNESVRLDDVEKHRVLTALEVIYEGGSLHGKTADFPT
Ga0170824_1036008021	3300031231	Forest Soil	MTAILVRFPDESVKLDDVEEPRVLTTLEVIYEGGSLHSKTADFAT
Ga0170824_1205642952	3300031231	Forest Soil	MTAILVRFLDESVKLDDVEEHRVLTGLEVIYEGGSLDGKTADFRTRDLERFVLGVHRR
Ga0170824_1234757891	3300031231	Forest Soil	MTALLVRFPDESVKLDDVEEGRVLTALEVIYEGGSLHGKTADLPSRDLE
Ga0170824_1272982113	3300031231	Forest Soil	MTATAFRFPDECVKLDDVEERRVLTALEVMYEGGSLHGKTANLP
Ga0170818_1072739241	3300031474	Forest Soil	MTAITGRIPDESVELDNVEERRVLTALEVIYEGGCLHGKTADFPTRDLERVVVG
Ga0310813_102440113	3300031716	Soil	MTAITVRIPDESVELDNVEERRVLTALEVIYEGGCLDGKTADFP
Ga0310813_123217922	3300031716	Soil	MTAIVTQFPDESVELDNVEEHRVLTTLEVIYEGGSLHG
Ga0307469_107551652	3300031720	Hardwood Forest Soil	MSMTAILVRFPDESIKLDDVEEHKVLTTLEVIYDGGSLHSKTADFPTRDL
Ga0307468_1019328803	3300031740	Hardwood Forest Soil	MTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSL
Ga0307475_101399982	3300031754	Hardwood Forest Soil	MMSIAVRFPDESVELDHVEQRRVLTCLEVIYEGGSLDGKTANFPTRDFSRFMVGVHPGR
Ga0307475_101973584	3300031754	Hardwood Forest Soil	MSMTAILARFPDESVKLDDVEERKVLTTLEVIYEGGSLHSKTADFPTRDLERFVVG
Ga0308175_1021270813	3300031938	Soil	MTAILVQFPNDSVKLDDVEERRVLTTLGVIYEGGSLHGKTADF
Ga0307479_114065522	3300031962	Hardwood Forest Soil	MTTIAARFPDESVEGDHVEERRVLTGLEVMYEGGPLHGKTEDFPNRDPERVVVGLHRRN
Ga0310903_105435142	3300032000	Soil	MTAILVRFPNESVKLDDVEEHRVLKTLEVIYEGGSLHGKSADFPTRDLERLVVGVHW
Ga0307472_1023559442	3300032205	Hardwood Forest Soil	MTAITVRFPDESVELDNVEERRVLTDLEVIYEGGL
Ga0310810_101136881	3300033412	Soil	MTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSR
Ga0310811_111795511	3300033475	Soil	MTAILVRFQNESVKFDDVEERRVLTTLGVIYEGGSLHGKTADFPTRDLERLVVGVHRRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071597

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences