Metagenome / Metatranscriptome Family F071443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071443
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	87 residues
Representative Sequence	MFGVFFSILVVVALLSILGEVVMRVRLTRRASRDKLAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWLFVACAGVLFLSILLWKSN
Number of Associated Samples	105
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.47 %
% of genes near scaffold ends (potentially truncated)	22.13 %
% of genes from short scaffolds (< 2000 bps)	77.05 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.869 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.934 % of family members)
Environment Ontology (ENVO)	Unclassified (24.590 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.180 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.35% β-sheet: 0.00% Coil/Unstructured: 35.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF02771	Acyl-CoA_dh_N	4.92
PF01180	DHO_dh	4.10
PF01070	FMN_dh	3.28
PF01592	NifU_N	2.46
PF00108	Thiolase_N	1.64
PF00535	Glycos_transf_2	1.64
PF13180	PDZ_2	1.64
PF01758	SBF	1.64
PF00330	Aconitase	1.64
PF01066	CDP-OH_P_transf	0.82
PF01850	PIN	0.82
PF06574	FAD_syn	0.82
PF00044	Gp_dh_N	0.82
PF08448	PAS_4	0.82
PF16640	Big_3_5	0.82
PF13631	Cytochrom_B_N_2	0.82
PF02683	DsbD	0.82
PF13478	XdhC_C	0.82
PF13243	SQHop_cyclase_C	0.82
PF03144	GTP_EFTU_D2	0.82
PF04677	CwfJ_C_1	0.82
PF12681	Glyoxalase_2	0.82
PF04221	RelB	0.82
PF08478	POTRA_1	0.82
PF02012	BNR	0.82
PF01878	EVE	0.82
PF12697	Abhydrolase_6	0.82
PF01515	PTA_PTB	0.82
PF07927	HicA_toxin	0.82
PF12867	DinB_2	0.82
PF13185	GAF_2	0.82
PF07786	HGSNAT_cat	0.82
PF00106	adh_short	0.82
PF13088	BNR_2	0.82
PF01343	Peptidase_S49	0.82
PF05016	ParE_toxin	0.82
PF08281	Sigma70_r4_2	0.82
PF02545	Maf	0.82
PF00856	SET	0.82
PF14450	FtsA	0.82
PF05768	Glrx-like	0.82
PF00903	Glyoxalase	0.82
PF00440	TetR_N	0.82
PF00180	Iso_dh	0.82
PF03626	COX4_pro	0.82
PF16576	HlyD_D23	0.82
PF04107	GCS2	0.82
PF02566	OsmC	0.82
PF00557	Peptidase_M24	0.82
PF02371	Transposase_20	0.82
PF00886	Ribosomal_S16	0.82
PF00266	Aminotran_5	0.82
PF01980	TrmO	0.82
PF09572	RE_XamI	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	7.38
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	7.38
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	4.92
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	4.10
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	4.10
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	4.10
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	2.46
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.64
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.64
COG3118	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.82
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.82
COG3077	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	Defense mechanisms [V]	0.82
COG1589	Cell division septal protein FtsQ	Cell cycle control, cell division, chromosome partitioning [D]	0.82
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	0.82
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	0.82
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.82
COG4775	Outer membrane protein assembly factor BamA	Cell wall/membrane/envelope biogenesis [M]	0.82
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.82
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.82
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.82
COG1720	tRNA (Thr-GGU) A37 N6-methylase	Translation, ribosomal structure and biogenesis [J]	0.82
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.82
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.82
COG0695	Glutaredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.82
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.82
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	0.82
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.82
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	0.82
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.87 %
Unclassified	root	N/A	22.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.87 %
Unclassified	root	N/A	22.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.87 %
Unclassified	root	N/A	22.13 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.16 %
Unclassified	root	N/A	22.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.10 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.13 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.84 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.13 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.84 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.13 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.84 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.84 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.92 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.82 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.84 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.10 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.82 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105422263	All Organisms → cellular organisms → Bacteria → Proteobacteria	1414	Open in IMG/M
3300001471\|JGI12712J15308_10060198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	962	Open in IMG/M
3300001661\|JGI12053J15887_10566319	Not Available	541	Open in IMG/M
3300003505\|JGIcombinedJ51221_10221506	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300004082\|Ga0062384_100380874	All Organisms → cellular organisms → Bacteria → Proteobacteria	903	Open in IMG/M
3300004091\|Ga0062387_100029660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2397	Open in IMG/M
3300004091\|Ga0062387_100246191	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300004091\|Ga0062387_101557436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300004092\|Ga0062389_101990984	Not Available	758	Open in IMG/M
3300004152\|Ga0062386_101787308	Not Available	513	Open in IMG/M
3300004463\|Ga0063356_100645031	Not Available	1443	Open in IMG/M
3300004479\|Ga0062595_100360026	Not Available	1019	Open in IMG/M
3300004635\|Ga0062388_100486127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1101	Open in IMG/M
3300004635\|Ga0062388_101783233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300005339\|Ga0070660_100423570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1102	Open in IMG/M
3300005445\|Ga0070708_100324762	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300005591\|Ga0070761_10143818	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005712\|Ga0070764_10498091	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300006050\|Ga0075028_100051358	All Organisms → cellular organisms → Bacteria → Acidobacteria	1984	Open in IMG/M
3300006052\|Ga0075029_100013494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4521	Open in IMG/M
3300006052\|Ga0075029_100135123	All Organisms → cellular organisms → Bacteria → Acidobacteria	1506	Open in IMG/M
3300006086\|Ga0075019_10205261	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300006086\|Ga0075019_10385660	Not Available	855	Open in IMG/M
3300006162\|Ga0075030_100497112	Not Available	970	Open in IMG/M
3300006162\|Ga0075030_101455937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300006176\|Ga0070765_100423614	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300006795\|Ga0075520_1265950	Not Available	710	Open in IMG/M
3300007255\|Ga0099791_10086048	Not Available	1437	Open in IMG/M
3300009038\|Ga0099829_11142911	Not Available	645	Open in IMG/M
3300009089\|Ga0099828_11142463	Not Available	691	Open in IMG/M
3300009092\|Ga0105250_10341557	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300009524\|Ga0116225_1477226	Not Available	554	Open in IMG/M
3300009639\|Ga0116122_1020425	Not Available	2384	Open in IMG/M
3300009839\|Ga0116223_10588886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300012189\|Ga0137388_10645531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300012208\|Ga0137376_10556252	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300012363\|Ga0137390_11263540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300012918\|Ga0137396_10724551	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012923\|Ga0137359_10436642	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300012925\|Ga0137419_10182211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1542	Open in IMG/M
3300012927\|Ga0137416_10633640	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300012929\|Ga0137404_12230035	Not Available	512	Open in IMG/M
3300012930\|Ga0137407_10999140	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300012958\|Ga0164299_10607443	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300012961\|Ga0164302_11651556	Not Available	535	Open in IMG/M
3300012980\|Ga0168315_104694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1427	Open in IMG/M
3300013296\|Ga0157374_10007255	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9442	Open in IMG/M
3300013297\|Ga0157378_11454066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300014489\|Ga0182018_10051788	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300014491\|Ga0182014_10016659	All Organisms → cellular organisms → Bacteria	6553	Open in IMG/M
3300014501\|Ga0182024_12210394	Not Available	602	Open in IMG/M
3300015054\|Ga0137420_1219518	Not Available	610	Open in IMG/M
3300015241\|Ga0137418_10400553	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300017792\|Ga0163161_10992608	Not Available	716	Open in IMG/M
3300017823\|Ga0187818_10034333	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300017935\|Ga0187848_10033071	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300017938\|Ga0187854_10258272	Not Available	753	Open in IMG/M
3300017943\|Ga0187819_10020811	All Organisms → cellular organisms → Bacteria → Acidobacteria	3815	Open in IMG/M
3300017947\|Ga0187785_10176897	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300018062\|Ga0187784_10000739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24769	Open in IMG/M
3300018064\|Ga0187773_11003622	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300018086\|Ga0187769_10177182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1571	Open in IMG/M
3300019887\|Ga0193729_1108425	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300020021\|Ga0193726_1007611	All Organisms → cellular organisms → Bacteria	6136	Open in IMG/M
3300020579\|Ga0210407_10246859	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300020582\|Ga0210395_10224049	All Organisms → cellular organisms → Bacteria → Acidobacteria	1411	Open in IMG/M
3300020583\|Ga0210401_10202046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1845	Open in IMG/M
3300021344\|Ga0193719_10008511	All Organisms → cellular organisms → Bacteria	4279	Open in IMG/M
3300021401\|Ga0210393_10546077	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300021401\|Ga0210393_10982344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300022714\|Ga0242671_1012470	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300022873\|Ga0224550_1029347	Not Available	780	Open in IMG/M
3300025501\|Ga0208563_1101718	Not Available	553	Open in IMG/M
3300025633\|Ga0208480_1096644	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300025633\|Ga0208480_1096793	Not Available	704	Open in IMG/M
3300025664\|Ga0208849_1094790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	833	Open in IMG/M
3300025903\|Ga0207680_10202602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1353	Open in IMG/M
3300025919\|Ga0207657_10058874	All Organisms → cellular organisms → Bacteria	3304	Open in IMG/M
3300025920\|Ga0207649_10248870	Not Available	1279	Open in IMG/M
3300025922\|Ga0207646_10054143	All Organisms → cellular organisms → Bacteria	3590	Open in IMG/M
3300025922\|Ga0207646_10057816	All Organisms → cellular organisms → Bacteria	3465	Open in IMG/M
3300026304\|Ga0209240_1182875	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300026320\|Ga0209131_1254201	Not Available	700	Open in IMG/M
3300026320\|Ga0209131_1359428	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300026514\|Ga0257168_1025505	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300026557\|Ga0179587_10186095	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1310	Open in IMG/M
3300027432\|Ga0209421_1011047	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300027829\|Ga0209773_10187596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300027846\|Ga0209180_10644769	Not Available	581	Open in IMG/M
3300027853\|Ga0209274_10000010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	233547	Open in IMG/M
3300027854\|Ga0209517_10119582	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300027854\|Ga0209517_10431084	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300027898\|Ga0209067_10582183	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300027905\|Ga0209415_10051560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5280	Open in IMG/M
3300027908\|Ga0209006_10091221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2706	Open in IMG/M
3300027911\|Ga0209698_10000581	All Organisms → cellular organisms → Bacteria → Acidobacteria	41904	Open in IMG/M
3300027911\|Ga0209698_11050912	Not Available	605	Open in IMG/M
3300028047\|Ga0209526_10380356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300028536\|Ga0137415_10229042	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300029907\|Ga0311329_10294576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1182	Open in IMG/M
3300029943\|Ga0311340_10562445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	1005	Open in IMG/M
3300029945\|Ga0311330_10120393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2570	Open in IMG/M
3300030000\|Ga0311337_10503562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1035	Open in IMG/M
3300030114\|Ga0311333_11687438	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300030659\|Ga0316363_10148539	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300030991\|Ga0073994_10061230	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300031708\|Ga0310686_105592930	All Organisms → cellular organisms → Bacteria → Acidobacteria	10506	Open in IMG/M
3300031708\|Ga0310686_105872670	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300031708\|Ga0310686_107114813	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300031715\|Ga0307476_10001075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17367	Open in IMG/M
3300031718\|Ga0307474_10000002	All Organisms → cellular organisms → Bacteria	326117	Open in IMG/M
3300031754\|Ga0307475_10171313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1731	Open in IMG/M
3300031754\|Ga0307475_10275906	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300031823\|Ga0307478_10549050	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300032160\|Ga0311301_10002671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	67276	Open in IMG/M
3300032180\|Ga0307471_100134095	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300032180\|Ga0307471_101363103	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300032205\|Ga0307472_100034898	All Organisms → cellular organisms → Bacteria	2967	Open in IMG/M
3300032828\|Ga0335080_10800281	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300034163\|Ga0370515_0018107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3261	Open in IMG/M
3300034163\|Ga0370515_0218594	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.62%
Host-Associated	Host-Associated	7.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.13%
Aquatic	Environmental → Aquatic	20.49%
Plants	Host-Associated → Plants	7.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.39%
Freshwater	Environmental → Aquatic → Freshwater	12.30%
Sediment	Environmental → Aquatic → Sediment	8.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.74%
Peat	Environmental → Terrestrial → Peat	4.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.64%
Geologic	Environmental → Terrestrial → Geologic	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.30%
Loam	Environmental → Terrestrial → Soil → Loam	10.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.64%
Mine	Environmental → Terrestrial → Geologic → Mine	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.28%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.20%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.28%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.28%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.64%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.64%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.64%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.64%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.82%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.82%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012980	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCW15	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054222633	3300000364	Soil	MFGVFFSILVVLGLVVIFGEIVMRVRLTXREXSRDKLAWWRRGGDDVAATYEELFPDSRIPRFRRFVFWLFIVWSGVLVLSMLLRKLN*
JGI12712J15308_100601982	3300001471	Forest Soil	MFGVFFSILVVVALLSILGEFVMRVRITRRVSHDKIAWWRRGGDEVAASYAEVFPGSRLPFFSRFLFWLLVTCAGVLVFSMLWKSN*
JGI12053J15887_105663192	3300001661	Forest Soil	MFGIFFSIFVVMAILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLFVASSGVL
JGIcombinedJ51221_102215061	3300003505	Forest Soil	MFGIFFSILVAVALLSIFGEIVMRVRLARRETSRDKLAWWRRGGEEVAATYEEAFPRSRIPFFRRFVFWFFVLLSGVLVLSILFWKSR*
Ga0062384_1003808742	3300004082	Bog Forest Soil	MFGIFFSILVVVALLSVFAEVVMRVRLTKRASRDKIAWWRRGGDEVAATYGEVFPDSRLPFFRRFVFWLLTACAGVLIFSLLLRKSN*
Ga0062387_1000296602	3300004091	Bog Forest Soil	MFAVFFSILAVVAIIGSCSEIVMRVRLTSREPSRDKLIWWRRGGDEVTAMYQELFPGTRLPLFRRLAFWLVVVGSLVVILSILRKSY*
Ga0062387_1002461912	3300004091	Bog Forest Soil	MSGVVFSIVVIVALLSICGELIMRIRLTRRASHDKIAWWRRGGDEVAATYEELFPDSRLPLFRRFAFWLFVVFACLVILSILWKSS*
Ga0062387_1015574361	3300004091	Bog Forest Soil	MFGIFFSILVVVALLSIFGELFMRVRLTKRASRDKVAWWRRGGDEVAASYAELFPDSRLPFFRHFVFWLLVTCTGILVFSMLWK
Ga0062389_1019909842	3300004092	Bog Forest Soil	MSGVVFSIVVIVALLSICGELIMRIRLTRRASHDKIAWWRRGGDEVAATYEELFPDSRLPLFRRFAFWLFVVFACLVSLSILWKSS*
Ga0062386_1017873081	3300004152	Bog Forest Soil	MFGVFFSILVLVALLSICGEVVMRVRLTRKETSRDKLAWWRRGGDEVAATYEELFPYSRLPLIRRFVFWLLVASAAVLLLSILWKSN*
Ga0063356_1006450312	3300004463	Arabidopsis Thaliana Rhizosphere	MFGVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRGGGDEVAATYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN*
Ga0062595_1003600263	3300004479	Soil	MFGVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN*
Ga0062388_1004861273	3300004635	Bog Forest Soil	VALLSILGEIVIRVRLTRKASSDKTAWWRRGGDEVSATYGEVFPDSSLPFFRRFIFWLVGFVLALSFLNAVEIKLTQRL*
Ga0062388_1017832332	3300004635	Bog Forest Soil	LIPTGNGTWLILEPLGDRPARMFGIFFSILILVGLLSICGELVMRIRLNRRASRDKVAWWRRGGDEVAATYEELFPDSRLPLFRRFASWLVLACSAVLLFSILWKSK*
Ga0070660_1004235702	3300005339	Corn Rhizosphere	MFGVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVATTYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN*
Ga0070708_1003247622	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFGIFFSILVVMAISSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVAWSGVLVFSLLLWKSN*
Ga0070761_101438182	3300005591	Soil	MSGIFFSILVAVALLSIFGEIVMRVRLARRETSRDKLAWWRRGGEEVAATYEEAFPRSRIPFFRRFVFWFFVLLSGVLVLSILFWKSR*
Ga0070764_104980912	3300005712	Soil	MFGIFFSILVAVALLSFFGEIVMRVRLTRRETSRDKLAWWRRGDEVAATYEEVFPHSRIPLFRRFVFWFFVLLSGVLVFSIIFWKSH*
Ga0075028_1000513582	3300006050	Watersheds	MFGIFFSILVLVGLLSICGEIVMRVRLTRNETSRDKLGWWRRGGDEVAATYEGLFPRSRRPLFRRFAFWLFLVWSAVMLLSILWKSN*
Ga0075029_1000134944	3300006052	Watersheds	MVLRWKRASMFGVFFSILVVVALLSILGEVVMRVRLTRRASRDKLAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWLFVACAGVLFLSILLWKSN*
Ga0075029_1001351233	3300006052	Watersheds	MGPFWRRSENQANSHVGVAFSILVPLALLSICGEFVMRIRLTKRASHDKIAWCRRGGDEVAATYEELYPHSRLLFFRRVVFWLFVVFACVALLSILLKSK*
Ga0075019_102052612	3300006086	Watersheds	MFGVFFSILVVVALLSILGEVVMRVRLTRRASRDKLAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWLFVACAGVLFLSILLWKSN*
Ga0075019_103856603	3300006086	Watersheds	MFGVLFSVLVVVALLSILGEIVMRVRLTKRASRDKIALWRRGDEVAALYEEEFPDSRLPLFRRVVFWIFVTCAGVLVCSMVLWKSK*
Ga0075030_1004971121	3300006162	Watersheds	MFGVFFAILVAMALTSSFIELFMRVRLSQRETSRDKLAWWRRGGDEVTATYQELFPRTKLPLFRLFAFWLLVALSSVFLVSILWKSR*
Ga0075030_1014559371	3300006162	Watersheds	MGPFWRRSENQANSHVGVAFSILVPLALLSICGEFVMRIRLTKRASHDKIAWCRRGGDEVAATYEELYPHSRLLFFRR
Ga0070765_1004236141	3300006176	Soil	RMFGIFFSILVAVALLSFFGEIVMRVRLTRRETSRDKLAWWRRGDEVAATYEEVFPHSRIPLFRRFVFWFFVLLSGVLVFSIIFWKSH*
Ga0075520_12659502	3300006795	Arctic Peat Soil	MFGVVFSIVVIVALLNVCGEIIMRIRLTRRASRDKIAWWRRGGDEVVASYEEIFPDSRLPLFRRFSLWLFVAFAAVVLLSILWKSN*
Ga0099791_100860486	3300007255	Vadose Zone Soil	MVGVFFSILGVVALLSIFGEIVMRVRLTRREPSRDKLAWWRRGGDEVAATYEELFPRSRIPLFRRFAFWLFVACSGVLVFSMLLRKLS*
Ga0099829_111429112	3300009038	Vadose Zone Soil	MFGIFFSIFVVMAILSIFGEIVMRVRLTRRETSGDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLFVAWSGVLVLSMLLWKSN*
Ga0099828_111424632	3300009089	Vadose Zone Soil	KWPASMFGVFFSILVVVALLSIFGEIVMRVRLTRRASHDKIAWWRRGGDEVAATYEEVFPESRLPLFRRFVFWLLVTCACVLFFSMILWKSN*
Ga0105250_103415572	3300009092	Switchgrass Rhizosphere	MFGVFFSIFVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVAATYEEVFPDSRLTFFRCFVFWVFVTFAGVLVFSMLLWKSN*
Ga0116225_14772262	3300009524	Peatlands Soil	MFGVFFSLLVVVALLSIFGEIVMRVRLTKRASRDKIAWWRRGGDEIVATYEEVFPDSRLPLFRRFIFWLVVACAGALLFSMLWK*
Ga0116122_10204254	3300009639	Peatland	MFSVIFSILLIVALLSICGEIIMRVRLTRRASHDKIAWWRRCSDEVVASYEEIFPDSRLPLLRRFAFWLVVAFAAVVLLSILWKSN*
Ga0116223_105888862	3300009839	Peatlands Soil	MFGVFFSILVVVALLSIFGEFAMRVRLTKKASPDKIAWWRRGGDEVAASYAEAFPDSRLPFFRRFVFWLVLTCAVVVFLTILWKSN*
Ga0137388_106455312	3300012189	Vadose Zone Soil	MFGIFFSIFVVMAILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLFVAWSGVLVFSMLLWKSN*
Ga0137376_105562522	3300012208	Vadose Zone Soil	MFGVFFSILVVLGLVGIFGEIVMRVRLTKRETSRDKLAWWRRGGDDVAATYEELFPDSRIPRFRRFVFWLFIVWSGVLVLSMLLRKLN*
Ga0137390_112635401	3300012363	Vadose Zone Soil	MFAVLFSILVLMGITSSFSEIVMRVRLTKKEPSRDKLVWWRRGGDEVTATYQELFPGTRLPLLRQFAFWLLVAFSAVVLLSILWKSK*
Ga0137396_107245511	3300012918	Vadose Zone Soil	MFGIFFSILVVMAILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVACSGVLVFSLLLWKSN*
Ga0137359_104366422	3300012923	Vadose Zone Soil	MVRIFFLLLMVMALLSICGEIVMRVRLTRRASRDKIAWWRRGGDEVAATYEEVFPDSRLPFLRRFVFWLVVTCAGVLVFSMLWRSN*
Ga0137419_101822113	3300012925	Vadose Zone Soil	MVGTFFSLLVVMALVSICGEIVMRVRLTKQETSRDKLAWWRRGGDQVAATYEELFPHSHIPAFRRFAFWLFVACCAFVFVPC*
Ga0137416_106336402	3300012927	Vadose Zone Soil	MFGIFFSILLLVALLSGCGEIVMRVRLTKRASRDKIAWWRRGGDEVAAAYEQLFPGRQLPLLRRFAFWLLIASSAAVLATVVWKS*
Ga0137404_122300351	3300012929	Vadose Zone Soil	MVGIFFSLLMVMALLSICGEIVMRVRLTRRASRDKIAWWRRGGDEVAATYEEVFPDSRLPFVRRFVFWLVMTCAGALVFSMLLWKSN*
Ga0137407_109991402	3300012930	Vadose Zone Soil	MVGVFFSIPGVVALLGIFGEIVMRVRLTRREPSRDKLAWWRRGADEVAATYEQVFPHSRIPLFKRFAFCLFVAWSGVLVLSMLLRKAT*
Ga0164299_106074432	3300012958	Soil	GVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN*
Ga0164302_116515562	3300012961	Soil	MFGVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWVFVTFA
Ga0168315_1046942	3300012980	Weathered Mine Tailings	MVGIFFSLLVVMALLSICGEIVMRVRLTRRALRDKIAWWRRGGDEVASTYEEVFPDSYLPFLRRFVFWLVVTCAGALLVSMLLRTSN*
Ga0157374_1000725510	3300013296	Miscanthus Rhizosphere	MFGVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVAETYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN*
Ga0157378_114540662	3300013297	Miscanthus Rhizosphere	MFDIFFSILVVIGLLSICGEIVMRVRLTRVETSRNKLVWWRRGGDEVTATYEELFPRSRLPFFRRFALWLFLGCSAVMLLSILLKPN*
Ga0182018_100517882	3300014489	Palsa	MFGIFFSILVVVALLSIFGEVVMRVRLTKRASRAKIAWWRRGGDEVAATYGEVFPDSRLPFFRRFVFWLLLACAGVLIFSVLLRKSN*
Ga0182014_100166597	3300014491	Bog	MFGVFFSILVAVALVSIFGEFAMRVRLTKKASHDKIAWWRRGGDEVAASYAEAFPNSRLPFFRRFVFWLVLTCAVVVFLTILWKSN*
Ga0182024_122103942	3300014501	Permafrost	MFSIFFIVLLVMALLSICGEIVMRVRLTRSEASGEKLVWWRRGGDEVAGAYEALFPRSRLLLVRRFPYWLIIVCAGVVLVSILWRLR*
Ga0137420_12195181	3300015054	Vadose Zone Soil	MFGVFFSILVVVALVSIFGEIFMRVRLTRRETSGDKPAWWRRGGDEVAATYEGLFPDSRLPFFRRFVFWLFVACDGVLVFS
Ga0137418_104005531	3300015241	Vadose Zone Soil	MFGIFFSILVVMAILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVAWSGVLVFSLLLWKSN*
Ga0163161_109926082	3300017792	Switchgrass Rhizosphere	MFGVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN
Ga0187818_100343334	3300017823	Freshwater Sediment	MFGIFFSILFLVAFLSICGEFIMRVRLTRRAPRDKLAWWRRGGDEVAAAYEQVFPDSQLPFVRRLVFWVFIACAGVLLFSILLWKSN
Ga0187848_100330712	3300017935	Peatland	MFSVIFSILLIVALLSICGEIIMRVRLTRRASHDKIAWWRRCSDEVVASYEEIFPDSRLPLLRRFAFWLVVAFAAVVLLSILWKSN
Ga0187854_102582721	3300017938	Peatland	NSGTIASLSRVVGQFGRIDNPEIWENRPTSMFSVIFSILLIVALLSICGEIIMRVRLTRRASHDKIAWWRRCSDEVVASYEEIFPDSRLPLLRRFAFWLVVAFAAVVLLSILWKSN
Ga0187819_100208112	3300017943	Freshwater Sediment	MMFGVFFSILVAMALVSICAEVIMRVRLTKREPSRDKLAWWRRGGDQLAATYEEVFPQSRLPLFRRFAFWLVLTWAAVLPFSMLWKSK
Ga0187785_101768972	3300017947	Tropical Peatland	MFGVLFSILVVMAILSSCSEIVMRVRLSTRESPAEKLLWWRRGGDEVAAMYQELFPRTRLPLFRRFAFWLVVASCFAILVSMLWKSHKPTI
Ga0187784_1000073911	3300018062	Tropical Peatland	MFGIFVSILLIVVLLSTCGEIMMRVRLTKREPSRDKLAWWRRGGDEVAATYEQLFPHSPVPILRRFVFWLVLASAVVLFVTMMLRPK
Ga0187773_110036222	3300018064	Tropical Peatland	MVGIFFSLSMVMALLSICAEIVMRVRLTRRASRDKIAWWRRGGDEVAATYEEAFPDSHLPIFRRFVFWLVVTCAGAPIFSMLLRKSN
Ga0187769_101771822	3300018086	Tropical Peatland	MLGVFFSILVVIALLSSCSELVMRIRITKSEPLDKIAWWRRGGDEVEAAYEELFPNSRLPLFRRFGFWLAAAGGGVLLFADPVEITLTRKRYRTY
Ga0193729_11084251	3300019887	Soil	MIGIFFSILVFLGLLSICGEIVMRVRLTRESSRDKPAWWRRGGDEVAATYEEAFPHSRLPLFRRFAFWLFVAGS
Ga0193726_10076116	3300020021	Soil	MLGIFFSILVVVALLSISGEFVMRVRLTRRASRDKIAWWRRGGDEVASSYAEVFPDSQLPVFRRFAFWLFLACCASVLVAVLWKR
Ga0210407_102468592	3300020579	Soil	MFGIFFSILVVMAILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVAWSGVLVFSLLLWKSN
Ga0210395_102240492	3300020582	Soil	MFGIFFSILVAVALLSIFGEIVMRVRLARRETSRDKLAWWRRGGEEVAATYEEAFPRSRIPFFRRFVFWFFVLLSGVLVLSILFWKSR
Ga0210401_102020462	3300020583	Soil	MFGVFFSILVVVALLSIFGEIVMRVRLTRREASRDKLVWWRRGGDEVAATYEEVFPDSRLPLFRRFVFWFFVAWSGVLVFSMLLWKSH
Ga0193719_100085112	3300021344	Soil	MFGVFFSILVVLGLVGIFGEIVMRVRLTKRETSRDKLAWWRRGGDDVAATYEELFPDSRIPRFRRFVFWLFIVWSGVLVLSMLLRKLN
Ga0210393_105460772	3300021401	Soil	MFGIFFSILVAVALLSFFGEIVMRVRLTRRETSRDKLAWWRRGDEVAATYEEVFPHSRIPLFRRFVFWFFVLLSGVLVFSIIFWKSH
Ga0210393_109823442	3300021401	Soil	MSGIFFSILVAVALLSIFGEIVMRVRLARRETSRDKLAWWRRGGEEVAATYEEAFPRSRIPFFRRFVFWFFVLLSGVLVLSILFWKSR
Ga0242671_10124702	3300022714	Soil	LDRMFGIFFSILVAVALLSIFGEIVMRVRLARRETSRDKLAWWRRGGEEVAATYEEAFPRSRIPFFRRFVFWFFVLLSGVLVLSILFWKSR
Ga0224550_10293472	3300022873	Soil	MFGIFFSILVVVALLSIFGEVVMRVRLTKRASRAKIAWWRRGGDEVAATYGEVFPDSRLPFFRRFVFWLLLACAGVLIFSVLLRKSN
Ga0208563_11017181	3300025501	Peatland	VGQFGRIDNPEIWENRPTSMFSVIFSILLIVALLSICGEIIMRVRLTRRASHDKIAWWRRCSDEVVASYEEIFPDSRLPLLRRFAFWLVVAFAAVVLLSILWKSN
Ga0208480_10966442	3300025633	Arctic Peat Soil	MGVLFSIFVVVALLSIFGEIVMRARLTKRETGRDKLAWWRRGGDEITATYGELFPHSLLPLFRSLVFWLFVA
Ga0208480_10967931	3300025633	Arctic Peat Soil	MFGVFFSILVVIGLLTIFGEIVMRVRLTKRASRNNIAWWRRGGDEVAESYQEVFPDSRLPFFRRFVFWFLLACAGVLAFSMLLWKST
Ga0208849_10947902	3300025664	Arctic Peat Soil	MGVLFSIFVVVALLSIFGEIVMRARLTKRETGRDKLAWWRRGGDEITATYGELFPHSLLPLFRSLVFWLFVACCAALLLLILLEKSK
Ga0207680_102026022	3300025903	Switchgrass Rhizosphere	MFGVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRGGGDEVAATYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN
Ga0207657_100588743	3300025919	Corn Rhizosphere	MFGVFFSILVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVATTYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN
Ga0207649_102488702	3300025920	Corn Rhizosphere	LVLVALLSIFGEIAMRVRLTKRASRDKIAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWVFVTFAGVLVFSMLLWKSN
Ga0207646_100541432	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFGVFFSIVGVVALLSICGELAMRVRLTKREPSDKLIWWRCGGDEVAATYEQLFPHSRPPLFRRFAFWLFITFCTVALLSILWKSN
Ga0207646_100578162	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFGIFFSILVVMAISSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVAWSGVLVFSLLLWKSN
Ga0209240_11828752	3300026304	Grasslands Soil	MFGVFFSILVVVALLSIFSEIVMRVRLTRRASRDKIAWWRRGGDEVAATYEEVFPDSRLPFLRRFVFWLFVSCAGVLVLS
Ga0209131_12542011	3300026320	Grasslands Soil	MFGVFFSILVLVALLSIFGEIVMRVRLTKRASRDKIAWWRRGGDEVTATYEEVFPDSRLPFFRRFVFWLVLACAGVLVFSMLLWRSN
Ga0209131_13594282	3300026320	Grasslands Soil	SMFGIFFSIFVVMAILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLLVAWSGVLVFSMLLWKSN
Ga0257168_10255053	3300026514	Soil	MFGIFFSILILVALLSGCGEIVMRVRLTKRASRDKIAWWRRGGDEVAATYEQLFPGSQLPLLRRFAFWLLIASTAALLVTVLWKSN
Ga0179587_101860952	3300026557	Vadose Zone Soil	MFGIFFSILVVMAILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVACSGVLVFSLLLWKSN
Ga0209421_10110472	3300027432	Forest Soil	MVGIFFSILVIMAVLSICGELVMRVRLTRREPSRDKLLWWRRGGDEVAAMYQELFPRARLPLFRLFLFWLVFAFSLAVVLAILWRPH
Ga0209773_101875961	3300027829	Bog Forest Soil	MLGIFFSILALVALLSICGELVMRIRLTGRASRDKVAWWRRGGDEVAATYEELFPDSRLPLFRRFASWLVLACS
Ga0209180_106447692	3300027846	Vadose Zone Soil	MFGIFFSIFVVMAILSIFGEIVMRVRLTRRETSGDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLFVAWSGVLVLSMLLWKSN
Ga0209274_10000010103	3300027853	Soil	MFGVFFSILVVVALLSILGEIVMRVRLTRRASSDKIAWWRRGGDEVSATYGEVFPDSSLPFFRRFIFWLVVACAGALVFSVLWRSS
Ga0209517_101195822	3300027854	Peatlands Soil	MFGVFFSILVVVALLSIFGEFAMRVRLTKKASPDKIAWWRRGGDEVAASYAEAFPDSRLPFFRRFVFWLVLTCAVVVFLTILWKSN
Ga0209517_104310841	3300027854	Peatlands Soil	MFGVFFSLLVVVALLSIFGEIVMRVRLTKRASRDKIAWWRRGGDEIVATYEEVFPDSRLPLFRRFIFWLVVACAGALLFSML
Ga0209067_105821832	3300027898	Watersheds	MFGVFFSILVVVALLSILGEVVMRVRLTRRASRDKLAWWRRGGDEVAATYEEVFPDSRLPFFRRFVFWLFVACAGVLFLSILLWKSN
Ga0209415_100515601	3300027905	Peatlands Soil	MFGVFFSLLVVVALLSIFGEIVMRVRLTKRASRDKIAWWRRGGDEVAASYAEAFPDSRLPFFRRFVFWLVLTCAVVVFLTILWKSN
Ga0209006_100912213	3300027908	Forest Soil	MFSVFFFILVLVALLSIFAELVMRVRLTRRAARDKIAWWRRGGDEVVATYEEVFPDSRLPLFTRFVFWLLVSCAGVLALSMLLLKSH
Ga0209698_100005819	3300027911	Watersheds	MFGVLFSVLVVVALLSILGEIVMRVRLTKRASRDKIALWRRGDEVAALYEEEFPDSRLPLFRRVVFWIFVTCAGVLVCSMVLWKSK
Ga0209698_110509121	3300027911	Watersheds	MFGVFFAILVAMALTSSFIELFMRVRLSQRETSRDKLAWWRRGGDEVTATYQELFPRTKLPLFRLFAFWLLVALSSVFLVSILWKSR
Ga0209526_103803561	3300028047	Forest Soil	MVGTFFLLLVVMALLSICGEIVRLTKLETSGDKLAWWRRGGDEIAATYEELFPRSHLPAFRRFAFWLFVACCASVFVTVLWRSN
Ga0137415_102290422	3300028536	Vadose Zone Soil	MFGIFFSILVVMAILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVAWSGLLVFSLLLWKSN
Ga0311329_102945762	3300029907	Bog	MIGILFSVLVVVSILSIFGEFFMRVRLTKNATHDKIAWWRRGGDEVAASYSELFPDSRLLFFRQLVFWLLVTSAAIFALSILLRKSH
Ga0311340_105624452	3300029943	Palsa	LWENRPAIMFGVFFSILVVGALLSMFGEFVMRVRLTKRASHDKIAWWRRGGDEVAASYAEIFPDSRLPFFRRFVFWLVVTCAGLLVFSMLLWKSY
Ga0311330_101203931	3300029945	Bog	PHKRRGNMIGILFSVLVVVSILSIFGEFFMRVRLTKNATHDKIAWWRRGGDEVAASYSELFPDSRLLFFRQLVFWLLVTSAAIFALSILLRKSH
Ga0311337_105035622	3300030000	Fen	MFGVLFSILVTVAILSVCGEFVMRIRLTKRASSDKIAWWRRGGDEVAASYEEIFPHSRLPLFRRTIFWLFVVLACVVLLSILLKSN
Ga0311333_116874381	3300030114	Fen	VLFSILVTVAILSVCGEFVMRIRLTKRASSDKIAWWRRGGDEVAASYEEIFPHSRLPLFRRTIFWLFVVLACVVLLSILLKSN
Ga0316363_101485391	3300030659	Peatlands Soil	MFGVFFSLLVVVALLSIFGEFVMRVRLTKRASHDKIAWWRRGGDEIVATYEEVFPDSRLPLFRRFIFWLVVACAGALLFSMLWK
Ga0073994_100612301	3300030991	Soil	MFTIFFSILVVMAIISSFAEIVMRVRLTKREPSRDKLIWWRRGGDEVAATYQEIFPRTRLPLFRRFAFWLVVACPLILLLTFLWKSH
Ga0310686_1055929301	3300031708	Soil	MVGAFFSILVVVALLSIFGEFVMRVRLAKRTSRDKIAWWRRGGDEVSTAYQEVFPDSSLPFFRRFIFRLVVACAGVLVLSMLWKAR
Ga0310686_1058726703	3300031708	Soil	MFGIFFSILVVVALLSIFGEIVMRVRLAKRASRDKIAWWRRGGDEVAATYGEVFPNSRLPFFRRFVFWLLTACAGVLIFSLLVRKSN
Ga0310686_1071148131	3300031708	Soil	EGRTGMFGVFFSILVVVGLLTIFGEIVMRVRLTKRASCNNIAWWRRGGDEVAASYQEIFPDSRLPFFRRFVFWLLLACAGVLAFSMLLWKSK
Ga0307476_100010756	3300031715	Hardwood Forest Soil	MFGIFFSILVAVALLSIFGEIVMRVRLTRRETSRDKLAWWRRGSDEVAATYEEVFPHSRIPFFRRFVFWFFVLLSGVLVFSIIFWKSH
Ga0307474_1000000234	3300031718	Hardwood Forest Soil	VFGVLFSMLVVLALLNILGEFVMRVRLTRRASYDKIAWWRRGGDEVAANYEEVFLESRLPLFRRFVFWLLVTCACVLFFSMILWKSN
Ga0307475_101713131	3300031754	Hardwood Forest Soil	MFGIFFSIFVVLALLSIFGEIVMRVRLTRRDTSGDKLAWWRRGGDEVAATYEDVFPRSPLPLFRRFVFWLVLASSG
Ga0307475_102759062	3300031754	Hardwood Forest Soil	MFGIFFSILVVMGILSIFGEIIMRVRLTRKETSRDKSAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVAWSGVLVFSLLLWKSN
Ga0307478_105490502	3300031823	Hardwood Forest Soil	MFGIFFSILVAVALLSIFGEIVMRVRLTRRETSRDKLAWWRRGSDEVAATYEEVFPHSRIPFFRRFVFWFFVLLSGV
Ga0311301_1000267152	3300032160	Peatlands Soil	MFGVFFSLLVVVALLSIFGEIVMRVRLTKRASRDKIAWWRRGGDEIVATYEEVFPDSRLPLFRRFIFWLVVACAGALLFSMLWK
Ga0307471_1001340952	3300032180	Hardwood Forest Soil	MFGVFGVFFSIMGVVALLSICGEFAMRVRLTKREPSRDKLIWWRRGGDDVAATYEELFPHSRLPLFRRFAFWLFITFSVVVFLAIMWIKLTH
Ga0307471_1013631032	3300032180	Hardwood Forest Soil	MFGIFFSILVVMGILSIFGEIVMRVRLTRRETSRDKLAWWRRGGDEVAATYEEVFPHSRLPLFRRFVFWLIVAWSGVLVFSMLLWKSN
Ga0307472_1000348985	3300032205	Hardwood Forest Soil	KGRILKPFEKSSPSMFGVFGFFFSIMAVVALLSICGEFAMRVRLTKREPSRDKLIWWRRGGDDVAATYEELFPHSRLPLFRRFAFWLFITFSVVVFLAMVWIKLTH
Ga0335078_107164693	3300032805	Soil	MFGILFSILLVSALLSICGEFIMRIRVTKRAWPDKIAWWRCGGDEVAATYEELFPNSRLALFRRVVFWLFMGFCAVTLGSILWK
Ga0335080_108002812	3300032828	Soil	MFSMFGVFFYIVAAVAVLSVFGEIVMRVRLTKRASRDKIACWRRGGDEVAATYEEIFPDSRLPFFRRFAFWLFVALCVLAIPMLLWKSN
Ga0370515_0018107_2006_2266	3300034163	Untreated Peat Soil	MVGVLFSALVIVAFLSGYGEVVMRIRLAKSAPNDKIAWWRLGGDEVAATYEELFPDSRLPLFRRFAFWLLVVFACLVLFFILWKSN
Ga0370515_0218594_570_803	3300034163	Untreated Peat Soil	VIVALLNILVEFVMRVRLTRRASRDKIAWWRRGGDEVAVTYAEVFSGSRLPFLRRFIFWLVVVCAGVLVFSMLLWKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071443

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences