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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F071260 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 122 |
| Average Sequence Length | 43 residues |
| Representative Sequence | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEEEQNE |
| Number of Associated Samples | 94 |
| Number of Associated Scaffolds | 122 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 19.17 % |
| % of genes near scaffold ends (potentially truncated) | 23.77 % |
| % of genes from short scaffolds (< 2000 bps) | 68.03 % |
| Associated GOLD sequencing projects | 86 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.38 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (71.311 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (33.607 % of family members) |
| Environment Ontology (ENVO) | Unclassified (64.754 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (84.426 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 31.34% β-sheet: 2.99% Coil/Unstructured: 65.67% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.38 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 122 Family Scaffolds |
|---|---|---|
| PF02954 | HTH_8 | 3.28 |
| PF00166 | Cpn10 | 2.46 |
| PF03796 | DnaB_C | 1.64 |
| PF01612 | DNA_pol_A_exo1 | 1.64 |
| PF13730 | HTH_36 | 1.64 |
| PF02195 | ParBc | 1.64 |
| PF02562 | PhoH | 0.82 |
| PF01755 | Glyco_transf_25 | 0.82 |
| PF10507 | TMEM65 | 0.82 |
| PF01391 | Collagen | 0.82 |
| PF01520 | Amidase_3 | 0.82 |
| PF00216 | Bac_DNA_binding | 0.82 |
| PF12705 | PDDEXK_1 | 0.82 |
| PF06067 | DUF932 | 0.82 |
| PF01510 | Amidase_2 | 0.82 |
| COG ID | Name | Functional Category | % Frequency in 122 Family Scaffolds |
|---|---|---|---|
| COG0234 | Co-chaperonin GroES (HSP10) | Posttranslational modification, protein turnover, chaperones [O] | 2.46 |
| COG0305 | Replicative DNA helicase | Replication, recombination and repair [L] | 1.64 |
| COG1066 | DNA repair protein RadA/Sms, contains AAA+ ATPase domain | Replication, recombination and repair [L] | 1.64 |
| COG0776 | Bacterial nucleoid DNA-binding protein IHF-alpha | Replication, recombination and repair [L] | 0.82 |
| COG0860 | N-acetylmuramoyl-L-alanine amidase | Cell wall/membrane/envelope biogenesis [M] | 0.82 |
| COG1702 | Phosphate starvation-inducible protein PhoH, predicted ATPase | Signal transduction mechanisms [T] | 0.82 |
| COG1875 | Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains | General function prediction only [R] | 0.82 |
| COG3306 | Glycosyltransferase involved in LPS biosynthesis, GR25 family | Cell wall/membrane/envelope biogenesis [M] | 0.82 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 71.31 % |
| All Organisms | root | All Organisms | 28.69 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 33.61% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 7.38% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 6.56% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 4.92% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 4.92% |
| Marine | Environmental → Aquatic → Marine → Coastal → Sediment → Marine | 4.10% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 4.10% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine | 4.10% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 3.28% |
| Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 3.28% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 2.46% |
| Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 2.46% |
| Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 1.64% |
| Marine Oceanic | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic | 1.64% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 1.64% |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 1.64% |
| Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 1.64% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 0.82% |
| Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.82% |
| Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.82% |
| Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 0.82% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.82% |
| Marine Surface Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water | 0.82% |
| Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 0.82% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.82% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 0.82% |
| Marine | Environmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine | 0.82% |
| Beach Aquifer Porewater | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater | 0.82% |
| Wastewater | Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater | 0.82% |
| Ocean Water | Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water | 0.82% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000101 | Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010 | Environmental | Open in IMG/M |
| 3300000116 | Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010 | Environmental | Open in IMG/M |
| 3300000127 | Marine microbial communities from chronically polluted sediments in Adventfjord, Norway - Svalbard Archipelago station 1 sample NOR 05_45m | Environmental | Open in IMG/M |
| 3300000128 | Marine microbial communities from chronically polluted sediments in Adventfjord, Norway : sample - Svalbard Archipelago station 1 sample NOR 08_45m | Environmental | Open in IMG/M |
| 3300001352 | Pelagic Microbial community sample from North Sea - COGITO 998_met_07 | Environmental | Open in IMG/M |
| 3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
| 3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
| 3300004448 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
| 3300004460 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
| 3300005837 | Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18 | Environmental | Open in IMG/M |
| 3300006467 | Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935 | Environmental | Open in IMG/M |
| 3300006484 | Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 | Environmental | Open in IMG/M |
| 3300006734 | Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG | Environmental | Open in IMG/M |
| 3300006738 | Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG | Environmental | Open in IMG/M |
| 3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
| 3300006753 | Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG | Environmental | Open in IMG/M |
| 3300006789 | Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG | Environmental | Open in IMG/M |
| 3300006793 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG | Environmental | Open in IMG/M |
| 3300006916 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 | Environmental | Open in IMG/M |
| 3300006922 | Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG | Environmental | Open in IMG/M |
| 3300006923 | Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG | Environmental | Open in IMG/M |
| 3300006924 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG | Environmental | Open in IMG/M |
| 3300006925 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG | Environmental | Open in IMG/M |
| 3300006927 | Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG | Environmental | Open in IMG/M |
| 3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
| 3300007637 | Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02 | Environmental | Open in IMG/M |
| 3300008050 | Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG | Environmental | Open in IMG/M |
| 3300008993 | Marine microbial communities from eastern North Pacific Ocean - P1 free-living | Environmental | Open in IMG/M |
| 3300009079 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 | Environmental | Open in IMG/M |
| 3300009420 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 | Environmental | Open in IMG/M |
| 3300009428 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 | Environmental | Open in IMG/M |
| 3300009431 | Combined Assembly of Gp0137033, Gp0137034 | Environmental | Open in IMG/M |
| 3300009436 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome | Environmental | Open in IMG/M |
| 3300009537 | Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - D-2W | Environmental | Open in IMG/M |
| 3300009543 | Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009592 | Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009599 | Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009606 | Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009619 | Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 | Environmental | Open in IMG/M |
| 3300009677 | Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010150 | Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG | Environmental | Open in IMG/M |
| 3300010151 | Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG | Environmental | Open in IMG/M |
| 3300010153 | Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG | Environmental | Open in IMG/M |
| 3300010354 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA | Environmental | Open in IMG/M |
| 3300010392 | Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385 | Environmental | Open in IMG/M |
| 3300010942 | Wastewater viral communities and vesicles from water purifying plant in Alicante,Spain - replicate C3 | Engineered | Open in IMG/M |
| 3300017719 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 | Environmental | Open in IMG/M |
| 3300017724 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17 | Environmental | Open in IMG/M |
| 3300017740 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13 | Environmental | Open in IMG/M |
| 3300017744 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23 | Environmental | Open in IMG/M |
| 3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
| 3300017760 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16 | Environmental | Open in IMG/M |
| 3300017770 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2) | Environmental | Open in IMG/M |
| 3300017786 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18 | Environmental | Open in IMG/M |
| 3300017969 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018424 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300020335 | Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035) | Environmental | Open in IMG/M |
| 3300020388 | Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064) | Environmental | Open in IMG/M |
| 3300021085 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 | Environmental | Open in IMG/M |
| 3300021089 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015 | Environmental | Open in IMG/M |
| 3300021185 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 | Environmental | Open in IMG/M |
| 3300021342 | Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300021375 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132 | Environmental | Open in IMG/M |
| 3300021958 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D | Environmental | Open in IMG/M |
| 3300022169 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3) | Environmental | Open in IMG/M |
| 3300022178 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3) | Environmental | Open in IMG/M |
| 3300023210 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG | Environmental | Open in IMG/M |
| 3300024191 | Seawater microbial communities from Monterey Bay, California, United States - 45D | Environmental | Open in IMG/M |
| 3300024250 | Seawater microbial communities from Monterey Bay, California, United States - 58D_r | Environmental | Open in IMG/M |
| 3300024343 | Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction | Environmental | Open in IMG/M |
| 3300024346 | Whole water sample coassembly | Environmental | Open in IMG/M |
| 3300025048 | Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes) | Environmental | Open in IMG/M |
| 3300025070 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025099 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025108 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025112 | Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes) | Environmental | Open in IMG/M |
| 3300025128 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
| 3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
| 3300025276 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes) | Environmental | Open in IMG/M |
| 3300025508 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025640 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes) | Environmental | Open in IMG/M |
| 3300025704 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes) | Environmental | Open in IMG/M |
| 3300026115 | Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes) | Environmental | Open in IMG/M |
| 3300026517 | Seawater microbial communities from Monterey Bay, California, United States - 8D | Environmental | Open in IMG/M |
| 3300027683 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027742 | Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027810 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes) | Environmental | Open in IMG/M |
| 3300027833 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes) | Environmental | Open in IMG/M |
| 3300027883 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome (SPAdes) | Environmental | Open in IMG/M |
| 3300031519 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2 | Environmental | Open in IMG/M |
| 3300031851 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515 | Environmental | Open in IMG/M |
| 3300032047 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915 | Environmental | Open in IMG/M |
| 3300032277 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| DelMOSum2010_100472907 | 3300000101 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEESKKEKKD* |
| DelMOSpr2010_1000086226 | 3300000116 | Marine | MFFEDAQFAWDLYNISPELTCTCDEVHTCQQCHEETKKETKI* |
| DelMOSpr2010_100680971 | 3300000116 | Marine | MFFENAQDAWELFKISPELTCTCDEVHTCQQCMKEEESN* |
| SA_S1_NOR05_45mDRAFT_101158272 | 3300000127 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEDKNNK* |
| SA_S1_NOR08_45mDRAFT_100016413 | 3300000128 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEDKNE* |
| SA_S1_NOR08_45mDRAFT_100032921 | 3300000128 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEDKN |
| SA_S1_NOR08_45mDRAFT_100349344 | 3300000128 | Marine | MFFEEAQFMAELYKISPELTCTCDEVHTCQQCDNELTT* |
| SA_S1_NOR08_45mDRAFT_101875373 | 3300000128 | Marine | AQFAWELYKISPELTCTCDEVHTCQQCYEEDKNNK* |
| JGI20157J14317_101837091 | 3300001352 | Pelagic Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEAKKEKEKKD* |
| JGI24006J15134_100654991 | 3300001450 | Marine | MLFEDAQDAWDLYSISPELTCTCDEFHTCQQCHEEETKEKK* |
| Ga0055584_1010853562 | 3300004097 | Pelagic Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEAKKEKEKKN* |
| Ga0065861_10030145 | 3300004448 | Marine | MFFEDAQDAWELFRISPELTCTCDEVHICQQCFEEDKNNLKL* |
| Ga0065861_10146576 | 3300004448 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEDKNN* |
| Ga0065861_10156212 | 3300004448 | Marine | MFFEDAQFAWELYKISPELTCTCDEFHTCQQCHEEDKNNK* |
| Ga0065861_10472538 | 3300004448 | Marine | MFYEDAQDAWELFRISPELTCTCDEVHTCQQCHEEENQTDTKNTKS* |
| Ga0066222_10219652 | 3300004460 | Marine | MFYEDAQDAWELFRISPELTCTCDEFHTCQQCHEEENQTDTKNTKS* |
| Ga0078893_111706232 | 3300005837 | Marine Surface Water | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEEENQTDTKDTKS* |
| Ga0099972_100126552 | 3300006467 | Marine | MFFEDAQFAWEMFRISPELTCTCDEVHTCQQCYEEDKND* |
| Ga0070744_100417753 | 3300006484 | Estuarine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEDKRNSKLK* |
| Ga0098073_10111211 | 3300006734 | Marine | MFFEDAQDMYMLYNISPELTCTCDEFHTCQQCNEEWKN* |
| Ga0098035_10219404 | 3300006738 | Marine | MLFEDAQDAWDLYSISPELTCQCDSVHICQQCREEENQEDTKNTKDTKSWTQN* |
| Ga0098048_10092197 | 3300006752 | Marine | MFFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEEELKENQERL* |
| Ga0098048_11666353 | 3300006752 | Marine | MFFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEE |
| Ga0098048_12234532 | 3300006752 | Marine | FFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEEELKENQEKL* |
| Ga0098039_12968002 | 3300006753 | Marine | MLFEDAQDAWDLYNISPELTCTCDEFHTCQQCHEEENQEDTKNTKDTKS* |
| Ga0098054_10556892 | 3300006789 | Marine | MLFEDAQDAWDLYNISPELTCTCDEFHTCQQCHEEENQTDTKDTKS* |
| Ga0098054_10736335 | 3300006789 | Marine | MTIEMTFEDAQDAWDLYSISPELTCTCDEFHTCQQCH |
| Ga0098054_12021932 | 3300006789 | Marine | MNFEDAQDAWELFKISPELTCTCDEFHTCQQCHEEEKKENNEDTNNQNRHSR* |
| Ga0098055_10227919 | 3300006793 | Marine | MFYEDAQDAWELFRISPELTCTCDEFHTCQQCHEEENQTDTKDTKS* |
| Ga0070750_103971612 | 3300006916 | Aqueous | MFFEEAQDMMDLYSIDPSLTCTCDEFHTCQQCHEESTHLG* |
| Ga0098045_10519443 | 3300006922 | Marine | MFFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEEELKENQEKL* |
| Ga0098053_10267583 | 3300006923 | Marine | MLFEDAQDAWDLYNISPELTCTCDEFHTCQQCHEEENE* |
| Ga0098051_10676881 | 3300006924 | Marine | MMFYEDAQDAWDLYNISPELTCNCDQFHTCQQCHEEEN |
| Ga0098051_10957982 | 3300006924 | Marine | MLFEDAQDAWDLYSISPELTCTCDEFHTCQQCHEEENEPDTKQS* |
| Ga0098050_11345401 | 3300006925 | Marine | MFFEDAQDAWELFRISPELTCTCDEFHTCQQCYEELKKEANKDV* |
| Ga0098050_11680513 | 3300006925 | Marine | MLFEDAQDAWDLYNISPELTCTCDEFHTCQQCHEEENEPDTKQ |
| Ga0098034_10332032 | 3300006927 | Marine | MLFEDAQDAWDLYNISPELTCTCDEFHTCQQCHEEENQKDTKNTKDTKS* |
| Ga0099847_10221252 | 3300007540 | Aqueous | MFFEDAEFAWELYKISPELTCTCDEVHVCQQCYKEWQEDLEE* |
| Ga0099847_11765913 | 3300007540 | Aqueous | MFFEDAQFAWDLYNISPELTCTCDEVHTCQQCHEETKKETK |
| Ga0102906_10996263 | 3300007637 | Estuarine | MFFEDAQDAWELFRISPELTCTCDEVHTCQQCYEEDKNNK* |
| Ga0098052_12433662 | 3300008050 | Marine | MFFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEEELKENQKKL* |
| Ga0104258_10295202 | 3300008993 | Ocean Water | MFFEDAQFAWDLYSISPELTCTCDKFHTCQQCHEEENQTNTKDTKNTKS* |
| Ga0102814_101969845 | 3300009079 | Estuarine | MFYEDAQFAWDLYSISPELTCTCDEVHTCQQCHEEENQTNTKDTKS* |
| Ga0114994_100811843 | 3300009420 | Marine | MFFEDAQDAWELFRISPELTCTCDEVHVCQQCYEEL* |
| Ga0114915_100051633 | 3300009428 | Deep Ocean | MFFEDAQYAWELYKISPELTCTCDEVHTCQQCHEET* |
| Ga0120401_12002166 | 3300009431 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEKAKKERDEKK* |
| Ga0115008_102102173 | 3300009436 | Marine | MFYEDAQFAWDLYSINPELTCTCDEVHTCQQCHEEENKTNTKDTKS* |
| Ga0115008_107744653 | 3300009436 | Marine | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEEEQNE* |
| Ga0129283_104260161 | 3300009537 | Beach Aquifer Porewater | MMFEDAQDAFDMHSISPELTCTCDDYHMCQQCYEELKNEENIQKQ |
| Ga0115099_104083875 | 3300009543 | Marine | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEKENQEETKNN* |
| Ga0115101_11123893 | 3300009592 | Marine | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEKENQ |
| Ga0115101_11312171 | 3300009592 | Marine | RRLMFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEKENQEETKNN* |
| Ga0115101_11682061 | 3300009592 | Marine | RRLMFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEKENQTDTKDTKS* |
| Ga0115103_14489992 | 3300009599 | Marine | MFYEDAQFAWDLYSISPELTCTCDEVHTCQQCHEKENQTNTKNTKS* |
| Ga0115102_105859001 | 3300009606 | Marine | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEKENQTDTK |
| Ga0105236_10029053 | 3300009619 | Marine Oceanic | MNFEDAQDAWELFKISPELTCTCDQFHMCQQCHEEEKQENNTKEQKNG* |
| Ga0115104_100172622 | 3300009677 | Marine | MNFEDAQDAWELFKISPELTCTCDQFHTCQQCHEEENQENNTKKQKND* |
| Ga0098056_12241091 | 3300010150 | Marine | IMFYEDAQDAWELFRISPELTCTCDEFHTCQQCHEEENQTDTKDTKS* |
| Ga0098061_10061262 | 3300010151 | Marine | MFYEDAQDAWDLYSISPELTCQCDSVHICQQCREEENQEDTKDTKDTKSWTQN* |
| Ga0098061_10204236 | 3300010151 | Marine | MLFEDAQDAWDLYSISPELTCQCDSVHICQQCREEENQEDTK |
| Ga0098061_11265713 | 3300010151 | Marine | FEDAQDAWDLYSISPELTCTCDEFHTCQQCHEEETKEEE* |
| Ga0098061_12388941 | 3300010151 | Marine | EDAQDAWDLYSISPELTCQCDSVHICQQCREEEKGENNEDTNNKN* |
| Ga0098059_12449303 | 3300010153 | Marine | MFFEDAQDAWDLYSISPELTCTCDEFHTCQQCHEEENQTDTKDTK* |
| Ga0129333_107165402 | 3300010354 | Freshwater To Marine Saline Gradient | MMFEDAQDMYMLYSISPELTCTCDEFHICQQCHEEETKNADSN* |
| Ga0118731_1037354411 | 3300010392 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEDKKEKKDYTNNLGF* |
| Ga0118731_1091292983 | 3300010392 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEE |
| Ga0118731_11076673812 | 3300010392 | Marine | MFFEDAQDAWEMFRISPELTCTCDEVHTCQQCFEEDKKNNNK* |
| Ga0118731_11188704210 | 3300010392 | Marine | MFFEDAQFAWEMFRISPELTCTCDEVHTCQQCYEED |
| Ga0139176_100001116 | 3300010942 | Wastewater | MMFEDAQDRAMLYSISPELTCTCDQFHTCQQCCEEDNSSSSKSTPEWYDFD* |
| Ga0181390_10056867 | 3300017719 | Seawater | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEKENQEETKNN |
| Ga0181388_10406112 | 3300017724 | Seawater | MFYEDALDAWDLYNISPELTCTCDEVHTCQQCHEEENQEETKNN |
| Ga0181418_11087162 | 3300017740 | Seawater | MFYEDAQDAWDLYSISPELTCTCDELHTCQQCYEEWQ |
| Ga0181397_10210996 | 3300017744 | Seawater | MFYEDAQDAWELFKISPELTCTCDEFHTCQQCHEEEKQENNTKEQKNG |
| Ga0181407_11266401 | 3300017753 | Seawater | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHET |
| Ga0181408_10156226 | 3300017760 | Seawater | MFYEDAQDAWDLYSISPELTCTCDEFHTCQQCHEEEKQENNTKEQKNG |
| Ga0187217_12233722 | 3300017770 | Seawater | MFYEDAQDAWELFRISPELTCTCDEFHTCQQCHEEENQKDTKDTKS |
| Ga0181424_104134572 | 3300017786 | Seawater | MFFEDAQDAWELFKISPELTCTCDQFHTCQQCHEEENEPDTKQS |
| Ga0181585_109213951 | 3300017969 | Salt Marsh | MDLLDAEEAWEMYNISPELTCTCDDFHICQQCSNPEET |
| Ga0181591_101716054 | 3300018424 | Salt Marsh | MTFEEAQDMYALYSINPELTCTCDEFHMCQQCYEETKNEEHEQS |
| Ga0211690_10013364 | 3300020335 | Marine | MFFEDAQFAWDLYSINPELTCTCDEVHTCQQCHEEENQTNTKDTKS |
| Ga0211678_102424851 | 3300020388 | Marine | MTFEDAQFMAAMYSISPELTCQCDEVHTCQQCYEESKIKTQ |
| Ga0206677_1000110726 | 3300021085 | Seawater | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEKENQTDTKDTKS |
| Ga0206679_100776293 | 3300021089 | Seawater | MFYEDAQDAWDLYSISPELTCQCDSVHICQQCREEEKGENNEDTNNKN |
| Ga0206682_100733173 | 3300021185 | Seawater | MFYEDAQDAWELFRISPELTCTCDEFHTCQQCHEEENQEETKNN |
| Ga0206691_13358743 | 3300021342 | Seawater | MTFEDAQDAWDLYSISPELTCNCDEFHTCQQCHEEENQENQENTKDTKS |
| Ga0213869_103968741 | 3300021375 | Seawater | MMFEDAQFAAAMYSISPELTCTCDDVHECQQCYEKRKED |
| Ga0222718_101439642 | 3300021958 | Estuarine Water | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEELKKEMNNATQQKL |
| Ga0196903_10185172 | 3300022169 | Aqueous | MFFEDAEFAWELYKISPELTCTCDEVHVCQQCYKEWQEDLEE |
| Ga0196887_10863602 | 3300022178 | Aqueous | LMIFEDAQFAWDLYNISPELTCTCDEVHTCQQCHEETKKETKI |
| (restricted) Ga0233412_100431622 | 3300023210 | Seawater | MFFEEAQDMWDLYQISPELTCTCDEVHTCQQCYEEDKKN |
| Ga0228636_10033982 | 3300024191 | Seawater | MFFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEEELKENQEKL |
| Ga0228677_10423791 | 3300024250 | Seawater | MFFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEEE |
| Ga0244777_1000041215 | 3300024343 | Estuarine | MFFEDAQDAWELFRISPELTCTCDEVHTCQQCYEEDKNNK |
| Ga0244775_101586893 | 3300024346 | Estuarine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEDKRNSKLK |
| Ga0244775_102858365 | 3300024346 | Estuarine | MFYEDAQFAWDLYSISPELTCTCDEVHTCQQCHEEENQTNTKDTKS |
| Ga0244775_113292941 | 3300024346 | Estuarine | MFFEDAQFAWDLYNISPELTCTCDEVHTCQQCHEETK |
| Ga0207905_10038406 | 3300025048 | Marine | MFFEEAQFMAELYKISPELTCTCDEVHVCQQCYEEL |
| Ga0208667_100000886 | 3300025070 | Marine | MFFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEEELKENQERL |
| Ga0208669_10227296 | 3300025099 | Marine | MFFEDAQDAWDLYSISPELTCTCDEFHTCQQCHEEENQTDTKDTKDTKS |
| Ga0208669_10530184 | 3300025099 | Marine | MFYEDAQDAWELFRISPELTCTCDEFHTCQQCHEEENQTDTKDTKS |
| Ga0208793_11662502 | 3300025108 | Marine | MFYEDAQDAWDLYNISPELTCNCDQFHTCQQCHEEENQTDTKDTKS |
| Ga0209349_12057732 | 3300025112 | Marine | MLFEDAQDAWDLYSISPELTCQCDSVHICQQCREEENQED |
| Ga0208919_10754621 | 3300025128 | Marine | MLFEDAQDAWDLYNISPELTCTCDEFHTCQQCHEEENQKDTKNTKDTKS |
| Ga0209336_100020846 | 3300025137 | Marine | MFFEDAQDAWELFRISPELTCTCDEVHVCQQCYEEL |
| Ga0209337_10583035 | 3300025168 | Marine | MLFEDAQDAWDLYSISPELTCTCDEFHTCQQCHEEETKEKK |
| Ga0208814_10099344 | 3300025276 | Deep Ocean | MFFEDAQYAWELYKISPELTCTCDEVHTCQQCHEET |
| Ga0208148_100029217 | 3300025508 | Aqueous | MFFEDAQFAWDLYNISPELTCTCDEVHTCQQCHEETKKETKI |
| Ga0209198_11014612 | 3300025640 | Pelagic Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEAKKEKEKKD |
| Ga0209602_10511734 | 3300025704 | Pelagic Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEAKKERDEKK |
| Ga0208560_10005583 | 3300026115 | Marine Oceanic | MNFEDAQDAWELFKISPELTCTCDQFHMCQQCHEEEKQENNTKEQKNG |
| Ga0228607_11373442 | 3300026517 | Seawater | MFFEDAQDMAMLYSISPELTCQCDEVHTCQQCYEEELKENQEK |
| Ga0209392_12630342 | 3300027683 | Freshwater Sediment | MMFEDAQDMFMLYSISPELTCTCDEVHECQQCWEE |
| Ga0209121_101831012 | 3300027742 | Marine | MFFEDAQDAWELYKIAPELTCTCDEVHTCQQCMEEDKNITLKMYRGTLHR |
| Ga0209302_100090191 | 3300027810 | Marine | MFFEEAQFMAELYKISPELTCTCDEVHTCQQCDNELTT |
| Ga0209092_1000014310 | 3300027833 | Marine | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEEEQNE |
| Ga0209092_101917633 | 3300027833 | Marine | MFYEDAQFAWDLYSINPELTCTCDEVHTCQQCHEEENKTNTKDTKS |
| Ga0209713_100016779 | 3300027883 | Marine | MFFEDAQFAWELYKISPELTCTCDEVHTCQQCYEEDKNNK |
| Ga0307488_100190572 | 3300031519 | Sackhole Brine | MFFEDAQFAWDLYNISPELTCTCDKVHTCQQCHEETKKETKI |
| Ga0315320_100018121 | 3300031851 | Seawater | MFFEDAQDMAMLYSISPELTCTCDEVHTCQQCYEEELKENQERL |
| Ga0315330_103199532 | 3300032047 | Seawater | MFFEDAQDAWELFKISPELTCTCDQFHMCQQCHEEENEPDTKQS |
| Ga0315330_107748532 | 3300032047 | Seawater | MFFEDAQFAWDLYSISPELTCTCDEVHTCQQCHEETKKETKI |
| Ga0316202_104864912 | 3300032277 | Microbial Mat | MFFENAQDAWELFKISPELTCTCDEVHTCQQCMKEEESN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |