NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F070872

Metagenome Family F070872

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070872
Family Type Metagenome
Number of Sequences 122
Average Sequence Length 44 residues
Representative Sequence MKTQIKNWGDSKVIVLSTEFLKFQELKEGDWVDISDIVKVDK
Number of Associated Samples 51
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 13.11 %
% of genes near scaffold ends (potentially truncated) 13.93 %
% of genes from short scaffolds (< 2000 bps) 70.49 %
Associated GOLD sequencing projects 45
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.508 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface
(26.230 % of family members)
Environment Ontology (ENVO) Unclassified
(28.689 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Hypersaline (saline)
(41.803 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.57%    β-sheet: 11.43%    Coil/Unstructured: 80.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF00239Resolvase 2.46
PF01844HNH 2.46
PF08706D5_N 2.46
PF13385Laminin_G_3 1.64
PF09250Prim-Pol 1.64
PF05050Methyltransf_21 1.64
PF01555N6_N4_Mtase 1.64
PF13597NRDD 1.64
PF08241Methyltransf_11 1.64
PF00404Dockerin_1 1.64
PF01325Fe_dep_repress 0.82
PF00145DNA_methylase 0.82
PF13847Methyltransf_31 0.82
PF05063MT-A70 0.82
PF01609DDE_Tnp_1 0.82
PF13588HSDR_N_2 0.82
PF13610DDE_Tnp_IS240 0.82
PF00589Phage_integrase 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 2.46
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 2.46
COG0863DNA modification methylaseReplication, recombination and repair [L] 1.64
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 1.64
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 1.64
COG4725N6-adenosine-specific RNA methylase IME4Translation, ribosomal structure and biogenesis [J] 1.64
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.82
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.82
COG3293TransposaseMobilome: prophages, transposons [X] 0.82
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.82
COG5421TransposaseMobilome: prophages, transposons [X] 0.82
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.82
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.82


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.51 %
All OrganismsrootAll Organisms20.49 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001335|ML8_10008003All Organisms → cellular organisms → Archaea8567Open in IMG/M
3300005265|Ga0073580_122585Not Available9570Open in IMG/M
3300005613|Ga0074649_1001009All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon35221Open in IMG/M
3300005910|Ga0075113_1013635Not Available1464Open in IMG/M
3300005915|Ga0075122_10000514Not Available30333Open in IMG/M
3300005915|Ga0075122_10009941All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon5096Open in IMG/M
3300005915|Ga0075122_10033191Not Available2309Open in IMG/M
3300005915|Ga0075122_10050521Not Available1754Open in IMG/M
3300005915|Ga0075122_10060747Not Available1554Open in IMG/M
3300005915|Ga0075122_10068815Not Available1434Open in IMG/M
3300005915|Ga0075122_10069921Not Available1419Open in IMG/M
3300005915|Ga0075122_10073879Not Available1368Open in IMG/M
3300005915|Ga0075122_10093751Not Available1168Open in IMG/M
3300005915|Ga0075122_10102691Not Available1100Open in IMG/M
3300005915|Ga0075122_10133438Not Available925Open in IMG/M
3300005917|Ga0075115_10289538Not Available553Open in IMG/M
3300005918|Ga0075116_10008454All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon4583Open in IMG/M
3300005918|Ga0075116_10018372All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon3026Open in IMG/M
3300005918|Ga0075116_10042352All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Heimdallarchaeota → Candidatus Heimdallarchaeota archaeon1900Open in IMG/M
3300005918|Ga0075116_10256139Not Available645Open in IMG/M
3300005935|Ga0075125_10005749All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_32_426000Open in IMG/M
3300005935|Ga0075125_10031985All Organisms → Viruses → Predicted Viral2427Open in IMG/M
3300005935|Ga0075125_10049553Not Available1884Open in IMG/M
3300005935|Ga0075125_10101725Not Available1240Open in IMG/M
3300005935|Ga0075125_10179961Not Available878Open in IMG/M
3300005935|Ga0075125_10401354Not Available528Open in IMG/M
3300005936|Ga0075124_10338308Not Available530Open in IMG/M
3300005939|Ga0075123_10073161All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Heimdallarchaeota → Candidatus Heimdallarchaeota archaeon1334Open in IMG/M
3300005939|Ga0075123_10236312Not Available679Open in IMG/M
3300007960|Ga0099850_1325388Not Available579Open in IMG/M
3300008470|Ga0115371_10032484All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon4417Open in IMG/M
3300008470|Ga0115371_11136390Not Available823Open in IMG/M
3300008470|Ga0115371_11221045Not Available974Open in IMG/M
3300008470|Ga0115371_11266895Not Available825Open in IMG/M
3300009087|Ga0105107_10000319All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales → Ignavibacteriales bacterium29485Open in IMG/M
3300009149|Ga0114918_10038342Not Available3336Open in IMG/M
3300009149|Ga0114918_10100366Not Available1799Open in IMG/M
3300009149|Ga0114918_10100516All Organisms → Viruses → Predicted Viral1798Open in IMG/M
3300009149|Ga0114918_10107331Not Available1724Open in IMG/M
3300009149|Ga0114918_10113170Not Available1666Open in IMG/M
3300009149|Ga0114918_10123809Not Available1573Open in IMG/M
3300009149|Ga0114918_10127570Not Available1543Open in IMG/M
3300009149|Ga0114918_10202375Not Available1152Open in IMG/M
3300009149|Ga0114918_10336384Not Available835Open in IMG/M
3300009149|Ga0114918_10413074Not Available734Open in IMG/M
3300009149|Ga0114918_10423956Not Available722Open in IMG/M
3300009149|Ga0114918_10455863Not Available690Open in IMG/M
3300009149|Ga0114918_10542782Not Available619Open in IMG/M
3300009480|Ga0127405_1039668Not Available1200Open in IMG/M
3300009480|Ga0127405_1096189Not Available768Open in IMG/M
3300009514|Ga0129284_10005720Not Available6850Open in IMG/M
3300009529|Ga0114919_10009871All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon7467Open in IMG/M
3300009529|Ga0114919_10044744Not Available3294Open in IMG/M
3300009529|Ga0114919_10115007Not Available1949Open in IMG/M
3300009529|Ga0114919_10220954Not Available1346Open in IMG/M
3300009529|Ga0114919_10260039Not Available1225Open in IMG/M
3300009529|Ga0114919_10438625Not Available905Open in IMG/M
3300009529|Ga0114919_10696341Not Available692Open in IMG/M
3300009529|Ga0114919_10732711Not Available672Open in IMG/M
3300013099|Ga0164315_10000591All Organisms → cellular organisms → Archaea25639Open in IMG/M
3300013099|Ga0164315_10097954All Organisms → cellular organisms → Archaea2370Open in IMG/M
3300013101|Ga0164313_10910985Not Available718Open in IMG/M
3300014656|Ga0180007_10508993Not Available724Open in IMG/M
3300018065|Ga0180430_10036940Not Available3470Open in IMG/M
3300018065|Ga0180430_10948689Not Available600Open in IMG/M
3300018080|Ga0180433_10169959Not Available1800Open in IMG/M
3300020603|Ga0194126_10778728Not Available548Open in IMG/M
3300022828|Ga0222641_1002059All Organisms → Viruses → Predicted Viral2567Open in IMG/M
3300022828|Ga0222641_1002834Not Available2109Open in IMG/M
3300022858|Ga0222679_1011263Not Available1921Open in IMG/M
3300022874|Ga0222685_1000083Not Available21891Open in IMG/M
3300022874|Ga0222685_1007954Not Available2336Open in IMG/M
3300022890|Ga0222667_1005912Not Available3182Open in IMG/M
3300022890|Ga0222667_1057640Not Available720Open in IMG/M
3300023061|Ga0222700_1007994Not Available1958Open in IMG/M
(restricted) 3300023210|Ga0233412_10553054Not Available522Open in IMG/M
3300023262|Ga0222639_1045279All Organisms → Viruses → Predicted Viral1040Open in IMG/M
3300023292|Ga0222694_1001143All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium4927Open in IMG/M
3300023292|Ga0222694_1009035Not Available1473Open in IMG/M
3300023295|Ga0222684_1094554Not Available501Open in IMG/M
3300023435|Ga0222637_1039156Not Available941Open in IMG/M
3300024262|Ga0210003_1024955Not Available3493Open in IMG/M
3300024262|Ga0210003_1029585Not Available3094Open in IMG/M
3300024262|Ga0210003_1123677Not Available1142Open in IMG/M
3300024262|Ga0210003_1130598Not Available1100Open in IMG/M
3300024262|Ga0210003_1197568Not Available826Open in IMG/M
3300024262|Ga0210003_1284767Not Available639Open in IMG/M
3300024265|Ga0209976_10722378Not Available520Open in IMG/M
3300024433|Ga0209986_10006180Not Available9765Open in IMG/M
3300024433|Ga0209986_10258690Not Available841Open in IMG/M
3300024433|Ga0209986_10370649Not Available659Open in IMG/M
3300024433|Ga0209986_10496266Not Available538Open in IMG/M
3300025131|Ga0209128_1162154Not Available660Open in IMG/M
3300025642|Ga0208648_1003430Not Available9955Open in IMG/M
3300025697|Ga0208769_1039656Not Available1522Open in IMG/M
3300025697|Ga0208769_1155690Not Available640Open in IMG/M
3300025698|Ga0208771_1020944Not Available2194Open in IMG/M
3300025698|Ga0208771_1056333All Organisms → Viruses → Predicted Viral1183Open in IMG/M
3300025736|Ga0207997_1079112Not Available1130Open in IMG/M
3300025736|Ga0207997_1100527Not Available967Open in IMG/M
3300025736|Ga0207997_1106759Not Available928Open in IMG/M
3300027818|Ga0209706_10000256All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales → Ignavibacteriales bacterium29511Open in IMG/M
3300028920|Ga0272441_10007367Not Available17926Open in IMG/M
3300030616|Ga0272442_10013575All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon9719Open in IMG/M
3300031227|Ga0307928_10022494All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_32_424311Open in IMG/M
3300031227|Ga0307928_10140086All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1360Open in IMG/M
3300031227|Ga0307928_10185400Not Available1122Open in IMG/M
3300031227|Ga0307928_10203785Not Available1051Open in IMG/M
3300031227|Ga0307928_10227506Not Available972Open in IMG/M
3300031227|Ga0307928_10299140Not Available798Open in IMG/M
3300031227|Ga0307928_10548960Not Available505Open in IMG/M
3300031539|Ga0307380_10551444All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1002Open in IMG/M
3300031539|Ga0307380_10698984Not Available855Open in IMG/M
3300031539|Ga0307380_10847682Not Available749Open in IMG/M
3300031565|Ga0307379_11321338Not Available588Open in IMG/M
3300031578|Ga0307376_10088798All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon2187Open in IMG/M
3300031578|Ga0307376_10121948Not Available1821Open in IMG/M
3300031601|Ga0307992_1000823Not Available19099Open in IMG/M
3300031601|Ga0307992_1091339Not Available1243Open in IMG/M
3300031601|Ga0307992_1242311Not Available650Open in IMG/M
3300031669|Ga0307375_10328282Not Available972Open in IMG/M
3300031673|Ga0307377_11151666Not Available511Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface26.23%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake18.03%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water16.39%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake9.02%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil6.56%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment3.28%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.46%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment2.46%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment2.46%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.64%
Marine SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment1.64%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond1.64%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.82%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.82%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.82%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.82%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.82%
Wetlands BenthicEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Wetlands Benthic0.82%
SedimentEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Sediment0.82%
Lake WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water0.82%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.82%
Beach Aquifer PorewaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater0.82%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001335Wetlands benthic microbial communities from British Columbia, Canada - ML8EnvironmentalOpen in IMG/M
3300005265Hydrothermal sediment microbial communities from Guaymas Basin, California, USA 4484. Combined assembly of Gp0115313 and Gp0146561EnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300005910Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKAEnvironmentalOpen in IMG/M
3300005915Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKBEnvironmentalOpen in IMG/M
3300005917Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKHEnvironmentalOpen in IMG/M
3300005918Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKCEnvironmentalOpen in IMG/M
3300005935Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKNEnvironmentalOpen in IMG/M
3300005936Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKSEnvironmentalOpen in IMG/M
3300005939Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKXEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009480Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 10m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009514Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - F-1WEnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300013099Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay6, Core 4569-2, 0-3 cmEnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300014656Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaGEnvironmentalOpen in IMG/M
3300018065Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_S_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300022828Saline water microbial communities from Ace Lake, Antarctica - #227EnvironmentalOpen in IMG/M
3300022858Saline water microbial communities from Ace Lake, Antarctica - #939EnvironmentalOpen in IMG/M
3300022874Saline water microbial communities from Ace Lake, Antarctica - #1077EnvironmentalOpen in IMG/M
3300022890Saline water microbial communities from Ace Lake, Antarctica - #657EnvironmentalOpen in IMG/M
3300023061Saline water microbial communities from Ace Lake, Antarctica - #1454EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300023262Saline water microbial communities from Ace Lake, Antarctica - #185EnvironmentalOpen in IMG/M
3300023292Saline water microbial communities from Ace Lake, Antarctica - #1333EnvironmentalOpen in IMG/M
3300023295Saline water microbial communities from Ace Lake, Antarctica - #1075EnvironmentalOpen in IMG/M
3300023435Saline water microbial communities from Ace Lake, Antarctica - #143EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024265Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024433Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025642Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKL (SPAdes)EnvironmentalOpen in IMG/M
3300025697Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKC (SPAdes)EnvironmentalOpen in IMG/M
3300025698Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKX (SPAdes)EnvironmentalOpen in IMG/M
3300025736Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028920Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Prop-6NEnvironmentalOpen in IMG/M
3300030616Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Form-2OEnvironmentalOpen in IMG/M
3300031227Saline water microbial communities from Ace Lake, Antarctica - #232EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031601Marine microbial communities from Ellis Fjord, Antarctic Ocean - #133EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ML8_1000800383300001335Wetlands BenthicMKTQIKKWGDSKVIVLSLDFLKYHDAEVGDWVDISDIVIIKKDKEDE*
Ga0073580_12258583300005265SedimentMITQIKKYGDSKVIVLIPEFLKFHELDVGDWVDISDIVKAKSVEI*
Ga0074649_1001009173300005613Saline Water And SedimentMKTQIKKWGDSKVIILSREFLKFHDLKEGDWIDISDAIKTTPRILQ*
Ga0075113_101363543300005910Saline LakeMKTQIKNYGNSKVIILSLEFMKFHDLSIGDWVDIDDIVKVVKNE*
Ga0075122_1000051443300005915Saline LakeMKYMKTQVKKWGDSKVIVLSSDFLKYMKLKEDDWVDISDIIKDDNK*
Ga0075122_1000994173300005915Saline LakeMKTQVKKWGDSKVLVLSPDFMKYMELKEGSWVDLSDLIKCKK*
Ga0075122_1003319173300005915Saline LakeMITQIKKWGDSKVIILSPEFCKYMNLKISDWVDVSDIIKVEKIE*
Ga0075122_1005052133300005915Saline LakeMKTQIKKWGDSKVIVLTQEFLKFHDLKIGDWLDISDAIKVVKDDRS*
Ga0075122_1006074733300005915Saline LakeMKTQVKKWGDSNVIVLSPEFLRFQELETGDWVDISDIYKVKEVSK*
Ga0075122_1006881513300005915Saline LakeMITQIKTRGDSKVIVLSKEFLKFHGLEEGDWIDISDIAKVNI*
Ga0075122_1006992123300005915Saline LakeMKTQVKKYGDSKVIVLTPEFLKYHDLNVGDWIDISDIVKVKKHDA*
Ga0075122_1007387923300005915Saline LakeMKTQIKNYGNSKVIILSPEFMKFHDLSIGDWVDIDDIVKVVKNE*
Ga0075122_1009375143300005915Saline LakeMKTQVKKWGDSKVIILSKEFLKFHKIKTGDWVDISDIIKVKK*
Ga0075122_1010269163300005915Saline LakeMKTQVKKRGDSKVIVLSPEFCKYHDLNEGDWVDISDI
Ga0075122_1013343843300005915Saline LakeMKTQIKKIGTSKGIILPTEFLKFMELDLGDWVDISDIIKMVDIE*
Ga0075115_1028953833300005917Saline LakeGDSKVIVLTPEFLKYHDLNVGDWIDISDIVKVKKHDA*
Ga0075116_1000845493300005918Saline LakeMITQIKKWGDSKVIVFSAEFLKFHGLDVDDWIDISDIVKVKVEI*
Ga0075116_1001837273300005918Saline LakeMKTQVKKRGDSKVIVLSPEFCKYHDLNEGDWVDISDILKVKQ*
Ga0075116_1004235263300005918Saline LakeMKTQVKKWGDSKVIVLTPEFLKYMELKEGDWVDIGDIIKCK*
Ga0075116_1025613943300005918Saline LakeMKTQIKKWGDSKVIVLSSEFLKYMDLELGDWIDISDIIKLKKKQNGK*
Ga0075125_10005749113300005935Saline LakeMKTQVKKWGDSKVLVLSPDFMKYMELKEGDWVDISDIVKVTK*
Ga0075125_1003198533300005935Saline LakeMKTQIKSIGTSKGIILSKEFLKYMDLELGDWVDISDIVKVSK*
Ga0075125_1004955323300005935Saline LakeMKTQVKKWGDSKVIILSPEFLKFHELNIGDWVDIADIVKVEK*
Ga0075125_1010172523300005935Saline LakeMKTQIKKWGDSKVLILSKEFMKFHDLNEGDWVDIADIVKYKGGKINGKR*
Ga0075125_1017996143300005935Saline LakeMKTQIKKHGDSMVIVLSPEFCKFYDLNIADWVDISDIVKVKK*
Ga0075125_1040135423300005935Saline LakeMKTQIKTIGTSKGIILSPEFLKYNDLEVGDWVDVSEIKKVKK*
Ga0075124_1033830823300005936Lake WaterMKTQVKKWGDSKVIVLTPEFLKYMELKEGDWVDIGD
Ga0075123_1007316153300005939Saline LakeMKTQVKKWGDSKVLVLSPDFIKFMELKEGDWVDLSDLIKCLK*
Ga0075123_1023631233300005939Saline LakeMDVSMITQIKKWGDSKVIVFSAEFLKFHGLDVDDWIDISDIVKVKVEI*
Ga0099850_132538833300007960AqueousMKTQIKKYGDSKVIVLTPEFLKFMELNVGDWVDISDL
Ga0115371_1003248483300008470SedimentMKTQVKKWGDSKVIILSPEFCKFMGLDAGDWVDINDIIKVEKFK*
Ga0115371_1113639033300008470SedimentMITQIKTRGDSKVIVLTKEFLKFRGLKEGDWVDIADMAKVNI*
Ga0115371_1122104523300008470SedimentMKTQIKIRGDSKVIVLSKEFVKYHDLNEGDWVDIADIVKVTK*
Ga0115371_1126689523300008470SedimentMKTQVKKWGDSKILVLSPEFIKFHNIEIGDWLDIGDVVKVKPESFNQVN*
Ga0105107_1000031943300009087Freshwater SedimentMKTQIKQWGDSAGIILNKEFMKFYGLKIGDWVDVSDLVKVKPIKKEVKQTK*
Ga0114918_1003834243300009149Deep SubsurfaceMKTQIKKYGNSTILVLSTEFCNYHQLKVGDWVDIADIVKVTK*
Ga0114918_1010036663300009149Deep SubsurfaceMKTEIKKWGDSSVLVLSPEFMRFHNLVVGNWVDISDLIKVEKPNYDIK*
Ga0114918_1010051643300009149Deep SubsurfaceMKTQVKSYGNSKVLVLSPEFMKYMELKENDWVDISEIVKVKR*
Ga0114918_1010733153300009149Deep SubsurfaceMKTQIKKWGDSTVIILQSEFIKFHDLKIGDWVDIADIVKVKK*
Ga0114918_1011317013300009149Deep SubsurfaceMKTQVKKWGDSKVIVLTKEFLKYMDLKEGDWVDIS
Ga0114918_1012380973300009149Deep SubsurfaceMITQIKKIGTSKGIIIPKEYLKFHKLKEGDWIDISDIIKVEVEI*
Ga0114918_1012757083300009149Deep SubsurfaceLLITNKNMKTQIKTRGDSKVIVLSKEFLKFHDLKENDWVDISDIVKVKK*
Ga0114918_1020237533300009149Deep SubsurfaceMITQIKKIGTSKGIILPKEFLKFHELKEGDWIDISDLIKVKNGK*
Ga0114918_1033638443300009149Deep SubsurfaceMKTQIKQWGDSKVIVLSPEFCRFHDLNEGDWVDISDIV
Ga0114918_1041307423300009149Deep SubsurfaceMITQIKKRGDSKVIVLSPEFLKFQGLDENDWVDISDIIKVNPRIKQ*
Ga0114918_1042395623300009149Deep SubsurfaceMKTQIKKWGDSKVIVLNKEFLKYMNLKLGDWVDLADLVKVKQ*
Ga0114918_1045586313300009149Deep SubsurfaceMKTQIKNWGDSKVLILSREFLKFHDLKEGDWVDISDIIKVNKK*
Ga0114918_1054278213300009149Deep SubsurfaceMKTQIKIRGDSKVIVLSKEFLKFHDLNEGDWVDLSDIVKVKEAKNELE*
Ga0127405_103966813300009480Meromictic PondMKTEIKKWGDSSVLVLSPEFMRFHSLAVGDWVDISDLIKVTRPNYDIK*
Ga0127405_109618943300009480Meromictic PondMKTQIKKWGDSKVIVLSSDFLKYMELKEGDWVDIGDIIKCKQ*
Ga0129284_1000572073300009514Beach Aquifer PorewaterMKTEVKKWGDSKVIVLSPEFMRYHDLAVGDWVDISDLIKVERPRR*
Ga0114919_10009871103300009529Deep SubsurfaceMKTQIKKWGDSKVIILSSEFCKFYNLDVDDWVDISDIIKVEKENELS*
Ga0114919_1004474413300009529Deep SubsurfaceMITQIKKWGDSKVIILSPEFLKFYDLDVNDWVDISNI
Ga0114919_1011500743300009529Deep SubsurfaceMKTQIKNWGDSKVIVLSTEFLKFQELKEGDWVDISDIVKVDK*
Ga0114919_1022095433300009529Deep SubsurfaceMKTQIKTIGTSKGIILSPEFLKFMELELGDWVDIDDIIKVEKE*
Ga0114919_1026003913300009529Deep SubsurfaceMITQIKKWGDSKVIILSPEFLKFYDLDVNDWVDISDIIKVEIKNNGKF*
Ga0114919_1043862513300009529Deep SubsurfaceMKTQIKKWGDSKVIILSTEFLKFHNAKVGDWLDISDAVIVKPIKKK*
Ga0114919_1069634123300009529Deep SubsurfaceMKLQIKKRGDSKVIVLPSPFLNFHNLKEGDWLDMGDVVKVKREDFNNVA*
Ga0114919_1073271123300009529Deep SubsurfaceMKTQIKKYGDSKVIVLTPEFLKYMGLEIGDWVDISDMVKVR*
Ga0164315_10000591393300013099Marine SedimentMKTQIKKIGTSKGIIISKEMMAYHELEVGDWVDIADIVKVKK*
Ga0164315_1009795433300013099Marine SedimentMKTQIKKWGDSRVIILSPEFLKYMELEIGDWVDISDIVKLKK*
Ga0164313_1091098533300013101Marine SedimentMITQIKKWGDSKVLVLSPEFCKYHNLDIEDWVDISEIMKVEVEI*
Ga0180007_1050899323300014656GroundwaterMTKTQVKKIGTSLGIILPKDFVKYHNLKVNDWVDIDDIIKVKKKEKK*
Ga0180430_1003694053300018065Hypersaline Lake SedimentMKIQIKKWGDSRVLVLPPVFLKYMDLKEDDWIDISDICRCNPKRSLK
Ga0180430_1094868913300018065Hypersaline Lake SedimentMKTQIKNWGDSKVVVLSPDFLEFHGLNAGDWVDISDIVKVKAPKIR
Ga0180433_1016995913300018080Hypersaline Lake SedimentMKTQVKKWGDSKVIVLSKEVCKYHGIKEGDWIDIADIVKVYQEEEEE
Ga0194126_1077872823300020603Freshwater LakeMKTQLKKWGNSMVIVLSQDFIEFRNLKEGDWVDIDDLVKVYSKPTKFISK
Ga0222641_100205973300022828Saline WaterMKTQIKNYGNSKVIILSPEFMKFHDLSIGDWVDIDDIVKVVKNE
Ga0222641_100283413300022828Saline WaterMKTQIKKWGDSKVIVLSSEFLKYMDLELGDWIDISDIIKLKKKQNGK
Ga0222679_101126343300022858Saline WaterMKYMKTQVKKWGDSKVIVLSSDFLKYMKLKEDDWVDISDIIKDDNK
Ga0222685_100008343300022874Saline WaterMITQIKKWGDSKVIVFSAEFLKFHGLDVDDWIDISDIVKVKVEI
Ga0222685_100795443300022874Saline WaterMKTQVKKWGDSKVIVLTPEFLKYMELKEGDWVDIGDIIKCK
Ga0222667_100591243300022890Saline WaterMITQIKKWGDSKVIILSPEFCKYMNLKISDWVDVSDIIKVEKIE
Ga0222667_105764013300022890Saline WaterMKTQVKKYGDSKVIVLTPEFLKYHDLNVGDWIDISDIVKVKKHDAXKYDQAKSR
Ga0222700_100799443300023061Saline WaterMDVSMITQIKKWGDSKVIVFSAEFLKFHGLDVDDWIDISDIVKVKVEI
(restricted) Ga0233412_1055305423300023210SeawaterMKTQVKKYGNSTVLVLSSEYLKYMELKEGDWLDLSDLIKCTK
Ga0222639_104527953300023262Saline WaterQIKKIGTSKGIILPTEFLKFMELDLGDWVDISDIIKMVDIE
Ga0222694_100114363300023292Saline WaterMKTQIKTIGTSKGIILSPEFLKFHDLELGDWIDISDIIKVRKK
Ga0222694_100903533300023292Saline WaterMKTQVKKYGDSKVIVLTPEFLKYHDLNVGDWIDISDIVKVKKHDA
Ga0222684_109455413300023295Saline WaterQVKKWGDSKVIVLTPEFLKYMELKEGDWVDIGDIIKCK
Ga0222637_103915633300023435Saline WaterMKTQIKKWGDSKVIVLTQEFLKFHDLKIGDWLDISDAIKVVKDDRS
Ga0210003_102495583300024262Deep SubsurfaceMKTQVKSYGNSKVLVLSPEFMKYMELKENDWVDISEIVKVKR
Ga0210003_102958543300024262Deep SubsurfaceMKTQIKKYGNSTILVLSTEFCNYHQLKVGDWVDIADIVKVTK
Ga0210003_112367733300024262Deep SubsurfaceMKTEIKKWGDSSVLVLSPEFMRFHNLVVGNWVDISDLIKVEKPNYDIK
Ga0210003_113059823300024262Deep SubsurfaceMKTQIKKWGDSTVIILQSEFIKFHDLKIGDWVDIADIVKVKK
Ga0210003_119756813300024262Deep SubsurfaceMITQIKKRGDSKVIVLSPEFLKFQGLDENDWVDISDIIKVNPRIKQ
Ga0210003_128476723300024262Deep SubsurfaceMITQIKKYGDSKVLVLSKEFLKYMELDVGNFVDISDIVKLKEKKK
Ga0209976_1072237833300024265Deep SubsurfaceMRTQIKKWGDSNVLVLSLDFKKYHNAEVGDWVDLTDVKIIKNKDKNVKPIN
Ga0209986_10006180203300024433Deep SubsurfaceMKTQIKKWGDSKVIILSSEFCKFYNLDVDDWVDISDIIKVEKENELS
Ga0209986_1025869033300024433Deep SubsurfaceMKTQIKNWGDSKVIVLSTEFLKFQELKEGDWVDISDIVKVDK
Ga0209986_1037064913300024433Deep SubsurfaceQIKKWGDSKVIILSPEFLKFYDLDVNDWVDISDIIKVEIKNNGKF
Ga0209986_1049626623300024433Deep SubsurfaceMKTQIKKYGDSKVIVLTPEFLKYMGLEIGDWVDISDMVKVR
Ga0209128_116215433300025131MarineKTQIKTWGDSKIIVLSRDFLKFHDLKQGDWVDISDIVKLRVKTK
Ga0208648_1003430133300025642Saline LakeMKTQVKKWGDSKVLVLSPDFMKYMELKEGSWVDLSDLIKCKK
Ga0208769_103965663300025697Saline LakeMKTQVKKRGDSKVIVLSPEFCKYHDLNEGDWVDISDILKVKQ
Ga0208769_115569013300025697Saline LakeLFNIIRYMKTQVKKWGDSKVIVLTPEFLKYMELKEGDWVDIGDIIKCK
Ga0208771_102094423300025698Saline LakeMKTQIKSIGTSKGIILSKEFLKYMDLELGDWVDISDIVKVSK
Ga0208771_105633323300025698Saline LakeMKTQVKKWGDSKVLVLSPDFIKFMELKEGDWVDLSDLIKCLK
Ga0207997_107911233300025736Saline LakeMKTQIKKWGDSKVLILSKEFMKFHDLNEGDWVDIADIVKYKGGKINGKR
Ga0207997_110052743300025736Saline LakeMKTQVKKWGDSKVLVLSPDFMKYMELKEGDWVDISDIVKVTK
Ga0207997_110675923300025736Saline LakeMKTQVKKWGDSKVIILSPEFLKFHELNIGDWVDIADIVKVEK
Ga0209706_10000256303300027818Freshwater SedimentMKTQIKQWGDSAGIILNKEFMKFYGLKIGDWVDVSDLVKVKPIKKEVKQTK
Ga0272441_10007367143300028920Marine SedimentMKTQVRKYGDSKVLVLVPEFCKFYNLEVGDWVDISDIVKVEVKQ
Ga0272442_10013575103300030616Marine SedimentMKTQIKQMGNSKVIILNKDFLKFHNLQVGDWVDLEDIFKVKRINGDKK
Ga0307928_1002249483300031227Saline WaterMKTQVKKWGDSKVLVLSPDFMKYMKLKEGDWVDISDIVKVTK
Ga0307928_1014008623300031227Saline WaterMKTQVKKWGDSKVLVLSPDFMKYMELKEGSWVDLSDLIKCKKXIRI
Ga0307928_1018540013300031227Saline WaterMKTQVKKIGSSKGIILSKEFLKYMDLELGDWVDISDIIKVTK
Ga0307928_1020378533300031227Saline WaterMITQIKTRGDSKVIVLSKEFLKFHGLEEGDWIDISDIAKVNI
Ga0307928_1022750613300031227Saline WaterLNLNKYMKTQIKKWGDSKVIVLTQEFLKFHDLKIGDWLDISDAIKVVKDDRS
Ga0307928_1029914023300031227Saline WaterMKTQIKKHGDSMVIVLSPEFCKFYDLNIADWVDISDIVKVKK
Ga0307928_1054896013300031227Saline WaterMKTQIKKWGDSKVIVLTQEFLKFHDLKIGDWLDIS
Ga0307380_1055144413300031539SoilMKTQIKKWGDSKVIVLPTEFLDYMKLNTDDWVDISDINKVEKQNE
Ga0307380_1069898413300031539SoilMKTQIKQYGNSKVLVLTKEFLKYMELKEGDWVDISDLTKVNGKF
Ga0307380_1084768223300031539SoilMKTQIKKRATSLVIVLTKEFLKYMELKEGDWVDIADIHKVKKEDGATEYVN
Ga0307379_1132133823300031565SoilMKTQIKRRNGSLVIVLSPEFCRFMELKEGDWVDASDLVKVKK
Ga0307376_1008879893300031578SoilMITQIKQWGDSKVIILPPEFMKFHKLKIGDWLDISDIVKTKPK
Ga0307376_1012194853300031578SoilMKTQIKQWGDSKVIVLSPEFLKYMGLEVGDWIDASDILKVNRGMEDE
Ga0307992_100082393300031601MarineMKTQIKKWGDSNVIVLSPEFLKFQELKTGDWVDISDIVKVKEVLR
Ga0307992_109133923300031601MarineMKTQIKKIGTSKGIILPTEFLKFMELDLGDWVDISDIIKMVNIE
Ga0307992_124231133300031601MarineMKTQIKKWGDSKVIVLTPDFLKFYDVKVGDWLDLSDVIKVTK
Ga0307375_1032828213300031669SoilMKTQIKKWGDSKVIVLPTEFLDYMKLNTDDWVDISDINKVEKKNE
Ga0307377_1115166613300031673SoilMITQIKKIGTSKGLILSPEFLKFHKLDVDDWVDVSDIIKVEVDL


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