Basic Information | |
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Family ID | F070484 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 123 |
Average Sequence Length | 102 residues |
Representative Sequence | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEALIDVVRDMGRTLAAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMVQDDAIEFDRALEGLPE |
Number of Associated Samples | 114 |
Number of Associated Scaffolds | 123 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 77.24 % |
% of genes near scaffold ends (potentially truncated) | 98.37 % |
% of genes from short scaffolds (< 2000 bps) | 89.43 % |
Associated GOLD sequencing projects | 111 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.53 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (97.561 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (8.943 % of family members) |
Environment Ontology (ENVO) | Unclassified (21.138 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (37.398 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 28.91% β-sheet: 10.94% Coil/Unstructured: 60.16% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.53 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 123 Family Scaffolds |
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PF02900 | LigB | 38.21 |
PF00106 | adh_short | 18.70 |
PF00903 | Glyoxalase | 4.88 |
PF03992 | ABM | 4.07 |
PF01408 | GFO_IDH_MocA | 4.07 |
PF02615 | Ldh_2 | 3.25 |
PF00107 | ADH_zinc_N | 1.63 |
PF01019 | G_glu_transpept | 1.63 |
PF02776 | TPP_enzyme_N | 1.63 |
PF12681 | Glyoxalase_2 | 1.63 |
PF13185 | GAF_2 | 1.63 |
PF02245 | Pur_DNA_glyco | 0.81 |
PF01663 | Phosphodiest | 0.81 |
PF08240 | ADH_N | 0.81 |
PF02738 | MoCoBD_1 | 0.81 |
PF08659 | KR | 0.81 |
PF11838 | ERAP1_C | 0.81 |
PF07908 | Obsolete Pfam Family | 0.81 |
PF03473 | MOSC | 0.81 |
PF01636 | APH | 0.81 |
PF00892 | EamA | 0.81 |
PF00501 | AMP-binding | 0.81 |
COG ID | Name | Functional Category | % Frequency in 123 Family Scaffolds |
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COG2055 | Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family | Energy production and conversion [C] | 3.25 |
COG0405 | Gamma-glutamyltranspeptidase | Amino acid transport and metabolism [E] | 1.63 |
COG2094 | 3-methyladenine DNA glycosylase Mpg | Replication, recombination and repair [L] | 0.81 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 99.19 % |
Unclassified | root | N/A | 0.81 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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2228664022|INPgaii200_c1027053 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 693 | Open in IMG/M |
3300000564|RepKanNP_BrdU_F12BDRAFT_1001451 | All Organisms → cellular organisms → Bacteria | 1417 | Open in IMG/M |
3300000955|JGI1027J12803_109181418 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 599 | Open in IMG/M |
3300003995|Ga0055438_10066689 | All Organisms → cellular organisms → Bacteria | 963 | Open in IMG/M |
3300004020|Ga0055440_10102944 | All Organisms → cellular organisms → Bacteria | 683 | Open in IMG/M |
3300004145|Ga0055489_10264765 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. Cs1-4 | 547 | Open in IMG/M |
3300005213|Ga0068998_10041440 | All Organisms → cellular organisms → Bacteria | 877 | Open in IMG/M |
3300005294|Ga0065705_10388203 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 899 | Open in IMG/M |
3300005330|Ga0070690_101529347 | All Organisms → cellular organisms → Bacteria | 540 | Open in IMG/M |
3300005332|Ga0066388_102265152 | All Organisms → cellular organisms → Bacteria | 982 | Open in IMG/M |
3300005343|Ga0070687_101011162 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 603 | Open in IMG/M |
3300005365|Ga0070688_100491555 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 924 | Open in IMG/M |
3300005457|Ga0070662_101624063 | All Organisms → cellular organisms → Bacteria | 558 | Open in IMG/M |
3300005587|Ga0066654_10775835 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 542 | Open in IMG/M |
3300006049|Ga0075417_10646181 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 541 | Open in IMG/M |
3300006173|Ga0070716_100745865 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 753 | Open in IMG/M |
3300006844|Ga0075428_100289227 | All Organisms → cellular organisms → Bacteria | 1763 | Open in IMG/M |
3300006845|Ga0075421_102363754 | All Organisms → cellular organisms → Bacteria | 557 | Open in IMG/M |
3300006880|Ga0075429_101228900 | All Organisms → cellular organisms → Bacteria | 654 | Open in IMG/M |
3300006918|Ga0079216_10934603 | All Organisms → cellular organisms → Bacteria | 659 | Open in IMG/M |
3300009012|Ga0066710_104652904 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 513 | Open in IMG/M |
3300009100|Ga0075418_10890513 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 962 | Open in IMG/M |
3300009100|Ga0075418_12214069 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 599 | Open in IMG/M |
3300009137|Ga0066709_100093661 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 3648 | Open in IMG/M |
3300009156|Ga0111538_11523896 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 843 | Open in IMG/M |
3300009792|Ga0126374_10012195 | All Organisms → cellular organisms → Bacteria | 3444 | Open in IMG/M |
3300009804|Ga0105063_1016282 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 845 | Open in IMG/M |
3300010046|Ga0126384_10214605 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1533 | Open in IMG/M |
3300010333|Ga0134080_10201693 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 862 | Open in IMG/M |
3300010359|Ga0126376_11989333 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 623 | Open in IMG/M |
3300010362|Ga0126377_11559160 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 735 | Open in IMG/M |
3300010362|Ga0126377_12550400 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 587 | Open in IMG/M |
3300010366|Ga0126379_13812136 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 505 | Open in IMG/M |
3300010868|Ga0124844_1066233 | All Organisms → cellular organisms → Bacteria | 1318 | Open in IMG/M |
3300012206|Ga0137380_10353616 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1310 | Open in IMG/M |
3300012906|Ga0157295_10216733 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 621 | Open in IMG/M |
3300012971|Ga0126369_12721522 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 578 | Open in IMG/M |
3300013297|Ga0157378_12236886 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 598 | Open in IMG/M |
3300013308|Ga0157375_12016559 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 686 | Open in IMG/M |
3300014154|Ga0134075_10342387 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 655 | Open in IMG/M |
3300014326|Ga0157380_10949000 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 890 | Open in IMG/M |
3300014874|Ga0180084_1017357 | All Organisms → cellular organisms → Bacteria | 1306 | Open in IMG/M |
3300014885|Ga0180063_1014235 | All Organisms → cellular organisms → Bacteria | 2136 | Open in IMG/M |
3300014968|Ga0157379_10796175 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 892 | Open in IMG/M |
3300015077|Ga0173483_10797099 | All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Sulfolobales → Sulfolobaceae → Sulfolobus → Sulfolobus acidocaldarius | 545 | Open in IMG/M |
3300015200|Ga0173480_10059974 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1738 | Open in IMG/M |
3300015259|Ga0180085_1249814 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 521 | Open in IMG/M |
3300015372|Ga0132256_101895897 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 703 | Open in IMG/M |
3300015374|Ga0132255_100058115 | All Organisms → cellular organisms → Bacteria | 5077 | Open in IMG/M |
3300016445|Ga0182038_10353898 | All Organisms → cellular organisms → Bacteria | 1217 | Open in IMG/M |
3300017659|Ga0134083_10515104 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 537 | Open in IMG/M |
3300017947|Ga0187785_10328926 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 712 | Open in IMG/M |
3300018028|Ga0184608_10314988 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 687 | Open in IMG/M |
3300018058|Ga0187766_11326735 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 525 | Open in IMG/M |
3300018079|Ga0184627_10054407 | All Organisms → cellular organisms → Bacteria | 2073 | Open in IMG/M |
3300018422|Ga0190265_13711946 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 509 | Open in IMG/M |
3300018433|Ga0066667_10581113 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 932 | Open in IMG/M |
3300018482|Ga0066669_11872324 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 557 | Open in IMG/M |
3300020060|Ga0193717_1208290 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 520 | Open in IMG/M |
3300020067|Ga0180109_1272226 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 577 | Open in IMG/M |
3300021560|Ga0126371_13791694 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 509 | Open in IMG/M |
3300023071|Ga0247752_1065827 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 587 | Open in IMG/M |
3300025535|Ga0207423_1041135 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 803 | Open in IMG/M |
3300025560|Ga0210108_1027301 | All Organisms → cellular organisms → Bacteria | 1053 | Open in IMG/M |
3300025917|Ga0207660_10980179 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 689 | Open in IMG/M |
3300025972|Ga0207668_11674443 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 574 | Open in IMG/M |
3300026297|Ga0209237_1152417 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 891 | Open in IMG/M |
3300026301|Ga0209238_1062779 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1316 | Open in IMG/M |
3300026324|Ga0209470_1021485 | All Organisms → cellular organisms → Bacteria | 3472 | Open in IMG/M |
3300026331|Ga0209267_1185500 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 815 | Open in IMG/M |
3300026333|Ga0209158_1061471 | All Organisms → cellular organisms → Bacteria | 1503 | Open in IMG/M |
3300026333|Ga0209158_1146791 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 865 | Open in IMG/M |
3300026342|Ga0209057_1005733 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 8491 | Open in IMG/M |
3300026351|Ga0257170_1061803 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 526 | Open in IMG/M |
3300026524|Ga0209690_1014580 | All Organisms → cellular organisms → Bacteria | 4098 | Open in IMG/M |
3300026548|Ga0209161_10396195 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 607 | Open in IMG/M |
3300026548|Ga0209161_10514248 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 531 | Open in IMG/M |
3300027068|Ga0209898_1004590 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1590 | Open in IMG/M |
3300027169|Ga0209897_1008661 | All Organisms → cellular organisms → Bacteria | 1350 | Open in IMG/M |
3300027462|Ga0210000_1025667 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 911 | Open in IMG/M |
3300027526|Ga0209968_1089239 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 558 | Open in IMG/M |
3300027678|Ga0209011_1143027 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 675 | Open in IMG/M |
3300027765|Ga0209073_10460770 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 530 | Open in IMG/M |
3300027882|Ga0209590_10582580 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 720 | Open in IMG/M |
3300027907|Ga0207428_10030262 | All Organisms → cellular organisms → Bacteria | 4477 | Open in IMG/M |
3300027909|Ga0209382_10404289 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1520 | Open in IMG/M |
3300027909|Ga0209382_10871991 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 951 | Open in IMG/M |
3300027909|Ga0209382_11232650 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 763 | Open in IMG/M |
3300027957|Ga0209857_1038627 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 862 | Open in IMG/M |
3300028380|Ga0268265_10422952 | All Organisms → cellular organisms → Bacteria | 1237 | Open in IMG/M |
3300028381|Ga0268264_10251722 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1641 | Open in IMG/M |
3300030006|Ga0299907_10093632 | All Organisms → cellular organisms → Eukaryota | 2457 | Open in IMG/M |
3300031170|Ga0307498_10043971 | All Organisms → cellular organisms → Bacteria | 1176 | Open in IMG/M |
3300031226|Ga0307497_10009281 | All Organisms → cellular organisms → Bacteria | 2746 | Open in IMG/M |
(restricted) 3300031248|Ga0255312_1054867 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 955 | Open in IMG/M |
3300031545|Ga0318541_10270189 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 946 | Open in IMG/M |
3300031546|Ga0318538_10716621 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 543 | Open in IMG/M |
3300031561|Ga0318528_10399457 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 738 | Open in IMG/M |
3300031564|Ga0318573_10192756 | All Organisms → cellular organisms → Bacteria | 1079 | Open in IMG/M |
3300031573|Ga0310915_10106429 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 1901 | Open in IMG/M |
3300031720|Ga0307469_10203311 | All Organisms → cellular organisms → Bacteria | 1549 | Open in IMG/M |
3300031720|Ga0307469_11238539 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 706 | Open in IMG/M |
3300031731|Ga0307405_10413946 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1059 | Open in IMG/M |
3300031740|Ga0307468_100964033 | All Organisms → cellular organisms → Bacteria | 746 | Open in IMG/M |
3300031748|Ga0318492_10166900 | Not Available | 1116 | Open in IMG/M |
3300031771|Ga0318546_10932175 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 611 | Open in IMG/M |
3300031820|Ga0307473_10455592 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 853 | Open in IMG/M |
3300031879|Ga0306919_10017191 | All Organisms → cellular organisms → Bacteria | 4275 | Open in IMG/M |
3300031890|Ga0306925_11580021 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 639 | Open in IMG/M |
3300031890|Ga0306925_11997980 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 547 | Open in IMG/M |
3300031903|Ga0307407_10575691 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 835 | Open in IMG/M |
3300032002|Ga0307416_101574988 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 762 | Open in IMG/M |
3300032174|Ga0307470_10738255 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 755 | Open in IMG/M |
3300032180|Ga0307471_102733053 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 626 | Open in IMG/M |
3300032205|Ga0307472_102084269 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 570 | Open in IMG/M |
3300032342|Ga0315286_10615763 | All Organisms → cellular organisms → Bacteria | 1118 | Open in IMG/M |
3300032782|Ga0335082_10163368 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2144 | Open in IMG/M |
3300032782|Ga0335082_10229834 | All Organisms → cellular organisms → Bacteria | 1744 | Open in IMG/M |
3300033290|Ga0318519_10795000 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 582 | Open in IMG/M |
3300034090|Ga0326723_0106864 | All Organisms → cellular organisms → Bacteria | 1212 | Open in IMG/M |
3300034147|Ga0364925_0346368 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 559 | Open in IMG/M |
3300034148|Ga0364927_0249074 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 532 | Open in IMG/M |
3300034257|Ga0370495_0137396 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 771 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 8.94% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 8.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 7.32% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.50% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 6.50% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 5.69% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 4.88% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 4.88% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.25% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 3.25% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 2.44% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 2.44% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.44% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 2.44% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.63% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.63% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.63% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.63% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 1.63% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.63% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 1.63% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.63% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.63% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.63% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.63% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.81% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.81% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.81% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.81% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.81% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.81% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.81% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.81% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.81% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.81% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.81% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.81% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.81% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.81% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2228664022 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000564 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B | Environmental | Open in IMG/M |
3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300003995 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 | Environmental | Open in IMG/M |
3300004020 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 | Environmental | Open in IMG/M |
3300004145 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 | Environmental | Open in IMG/M |
3300005213 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 | Environmental | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006918 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 | Environmental | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300009804 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010868 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction) | Environmental | Open in IMG/M |
3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
3300012906 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1 | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014154 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015 | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014874 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D | Environmental | Open in IMG/M |
3300014885 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D | Environmental | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
3300015259 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D | Environmental | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
3300017659 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300017947 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG | Environmental | Open in IMG/M |
3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
3300018058 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG | Environmental | Open in IMG/M |
3300018079 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1 | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300020060 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2 | Environmental | Open in IMG/M |
3300020067 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300023071 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5 | Environmental | Open in IMG/M |
3300025535 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes) | Environmental | Open in IMG/M |
3300025560 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026297 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes) | Environmental | Open in IMG/M |
3300026301 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026324 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes) | Environmental | Open in IMG/M |
3300026331 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes) | Environmental | Open in IMG/M |
3300026333 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes) | Environmental | Open in IMG/M |
3300026342 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes) | Environmental | Open in IMG/M |
3300026351 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B | Environmental | Open in IMG/M |
3300026524 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes) | Environmental | Open in IMG/M |
3300026548 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes) | Environmental | Open in IMG/M |
3300027068 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes) | Environmental | Open in IMG/M |
3300027169 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes) | Environmental | Open in IMG/M |
3300027462 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) | Host-Associated | Open in IMG/M |
3300027526 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) | Host-Associated | Open in IMG/M |
3300027678 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300027957 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes) | Environmental | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300030006 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 | Environmental | Open in IMG/M |
3300031170 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031248 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5 | Environmental | Open in IMG/M |
3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
3300031546 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23 | Environmental | Open in IMG/M |
3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031748 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22 | Environmental | Open in IMG/M |
3300031771 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Host-Associated | Open in IMG/M |
3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032342 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0 | Environmental | Open in IMG/M |
3300032782 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1 | Environmental | Open in IMG/M |
3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
3300034090 | Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N | Environmental | Open in IMG/M |
3300034147 | Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17 | Environmental | Open in IMG/M |
3300034148 | Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17 | Environmental | Open in IMG/M |
3300034257 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
INPgaii200_10270531 | 2228664022 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEDLIAVVRDMGRTLLTTAPDALVVVADDHLNVFSFDAIPAXCVRVGRSVXXDGPARCDRVRPRPRRA |
RepKanNP_BrdU_F12BDRAFT_10014511 | 3300000564 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIGVVRAMGQTLTAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVSRMVQADAIEFDRALEGLPERYPVHEDLANS |
JGI1027J12803_1091814182 | 3300000955 | Soil | YPDYYGQNVGPHGRRMVEELIAVVREMGRSLAATAPDALVVIADDHLNVFSFDAVPALCVRVGRSVSRMVQHDAIEFDRALDGLP |
Ga0055438_100666893 | 3300003995 | Natural And Restored Wetlands | MGKVVYAAAMSHVLYPDYYGKNVGPHGRTMVEELIAVVRDMGRDLLAARPDALVVIADDHLNVFSFDAIPALCVRIGRSVERMVQDDAIEFDRALD |
Ga0055440_101029442 | 3300004020 | Natural And Restored Wetlands | MGKVVYAAAMSHVLYPDYYGKNVGPHGRTMVEELIAVVRDMGRDLLAARPDALVVIADDHLNVFSFDAIPALCVRIGRSVERMVQDDAIEFDRALDGLP |
Ga0055489_102647651 | 3300004145 | Natural And Restored Wetlands | MGRIVFAAAMSHVLDPDYYGTHCGPRGRQMVQELMNLVGEMGGRMAAARPDALVVVADDHLNVFSFNAVPAICVRIGTHVERMEQDHAVAFDRLL |
Ga0068998_100414401 | 3300005213 | Natural And Restored Wetlands | MGKVVYAAAMSHVLYPDYYGKNVGPHGRRMVEELIAVVRDMGRDMLAAKPDALVVIADDHLNVFSFDAIPAMCVRIGRSVQRMVQDDAIEFDRALDGLSERYPLHEDLANRV |
Ga0065705_103882031 | 3300005294 | Switchgrass Rhizosphere | MGKIVYAAAMSHVLHPDYYGQNVGPHGRRMVEELIAVVRAMGRTLTSAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMIQADAIEFDRALDGLPERYPVHEDLANS |
Ga0070690_1015293471 | 3300005330 | Switchgrass Rhizosphere | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPERYPLHE |
Ga0066388_1022651522 | 3300005332 | Tropical Forest Soil | MGRIIYAAAMSHVLDPEYYDRNVGRDGRRMVEGLIEVVREMGRAMLAARPDALVVIADDHLNVFSFDAIPAMCVRIGRSVDRMVQEDAIEFDRALDGLP |
Ga0070687_1010111622 | 3300005343 | Switchgrass Rhizosphere | MGKIVYAAAMSHVLHPDYYGQNVGPHGRRMVEELIAVVRAMGRTLTSAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMI |
Ga0070688_1004915551 | 3300005365 | Switchgrass Rhizosphere | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRYVERMVQADAIEFDR |
Ga0070662_1016240631 | 3300005457 | Corn Rhizosphere | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPERYPLH |
Ga0066654_107758352 | 3300005587 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPHGRRMVEALIAVVREMGQTLAAAAPDALVVIADDHLNVFSFDAVPAMCVRIGRSVSRMAQEG |
Ga0075417_106461811 | 3300006049 | Populus Rhizosphere | MGKIVYAAAMSHVLHPDYYGQNVGPHGRRMVEELIAVVRAMGRTLTSAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRM |
Ga0070716_1007458652 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MGRIVYAAAMSHVLHPPYYEKNVGPHGKRMVEELIAVVGEMGRELTVRRPDALVVIADDHLNVFSFDAVPAMCVRIGRSVSRMAQEGAIEFDRALDGLA |
Ga0075428_1002892272 | 3300006844 | Populus Rhizosphere | MGRIVYAAAMSHVLAPDYYGTNVGLHGRAMVEELMEVVRVMGREMLAARPDALVVVADDHLNVFSFDAVPAFCVRIGRGVERMVQEDAIEFDRALDGLPERYPLHEDLANRVLE |
Ga0075421_1023637541 | 3300006845 | Populus Rhizosphere | MGRIVYAAAMSHVLSPDYYGKNVGPHGRRLVEELIEEVRRMGAEMLDARPDAMIVVADDHLNVFSFDAVPALCVRIGRWVDRMVQADAIEFDRALDGLP |
Ga0075429_1012289002 | 3300006880 | Populus Rhizosphere | MGTIVYAAAMSHVLAPDYYGKNVGPHGRAMVEDLIEVVKGMGRELLATRPDALVVVADDHLNVFSFDAVPALCVRIGRTVERMVQEDAIEFD |
Ga0079216_109346031 | 3300006918 | Agricultural Soil | MSHVLYPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRAL |
Ga0066710_1046529041 | 3300009012 | Grasslands Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIGVVREMGRTLIAAAPDALVVIADDHLNVFSFDAVPALCVRVGRSVNRMIQDDAIEFDRALD |
Ga0075418_108905132 | 3300009100 | Populus Rhizosphere | MGRIVYAAAMSHVLAPDYYGTNVGLHGRAMVEELMEVVRVMGREMLAARPDALVVVADDHLNVFSFDAVPAFCVRIGRGVERMVQEDAIEFDRALDGLPERYPVHEDLA |
Ga0075418_122140691 | 3300009100 | Populus Rhizosphere | MGAIVYAAAMSHVLYPDYYGKNVGPHGRRMVEALIAEVQAMGAALRAARPDALVVVADDHLNVFSYDAVPALCVRVGRSVDRMVQADAIEFD |
Ga0066709_1000936612 | 3300009137 | Grasslands Soil | MGRIVYAAAMSHVLSPDYYDKNYDKNVGPRGRKMVEELMDVVRAMGRTMLEARPDALVVIADDHLNVFSFDAVPAFCVRIGQSVEKMVQDGAIEFDRALDAFARWTRAGSTS* |
Ga0111538_115238961 | 3300009156 | Populus Rhizosphere | MGQIVYAAAMSHVLYPDYYDQNVGAHGRRMVEELIDVVRDMGRTMLGARPDALVVIADDHLNVFSFDAIPAMCVRIGRSVDRMVQEDAIEFDRALDGLPARYP |
Ga0126374_100121951 | 3300009792 | Tropical Forest Soil | MGRLVYAAAMSHVLYPEYYEKNVGPSGRRMVEALIDVVRDMGRAMLDTRPDALVVIADDHLNVFSFNAVPALCVRIGRWVDRMTQDDAIEFDRALDGLPARYALHEDLANRILERG |
Ga0105063_10162821 | 3300009804 | Groundwater Sand | MGRIVYAAAMSHVLYPDYYGENVGPHGRRMVEALIDEVRDMGRTLAAAAPDALVVIADDHLNVFSFDAVPALCVRIGKTVSRMVQEDAIE |
Ga0126384_102146052 | 3300010046 | Tropical Forest Soil | MGRLVYAAAMSHVLYPEYYEKNVGPSGRRMVEALIDVVRDMGRAMLDTRPDALVVIADDHLNVFSFNAVPALCVRIGRWVDRMTQDDSIEFD |
Ga0134080_102016931 | 3300010333 | Grasslands Soil | MGRIVYAAAMSHVLYPDYYGENVGPHGRRMVEELIGVVRAMGRTLMAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVSRMVQADAIEFDRALDGLPERYPLHEDLANGI |
Ga0126376_119893332 | 3300010359 | Tropical Forest Soil | MGRLVYAAAMSHVLYPDYYGKNVGPHGRKMVEELIAVVQVMGRELLATRPDALVVIADDHLNVFSFDAIPAMCVRIGRTVERMVQADAIEFDQALDGLPQRY |
Ga0126377_115591601 | 3300010362 | Tropical Forest Soil | MGRIVYAAAMSHVLYPDYYDKNVGPHGRKMVEELIDVVRDMGRTMLSARPDALVVIADDHLNVFSFDAIPAMCVRIGRSVDRM |
Ga0126377_125504002 | 3300010362 | Tropical Forest Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEKLIAVVRAMGRTLVAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVSRMVQADAIEFDRALDGLP |
Ga0126379_138121361 | 3300010366 | Tropical Forest Soil | MRRLAPGRGIRSTRQAFGGMMGAGGPMGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIGVVRAMGRTLVAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVSRMVQADAIEFDRALDGLPDRYPVHE |
Ga0124844_10662331 | 3300010868 | Tropical Forest Soil | MRRLAPGRGIRSTRQAFGGMMGAGGPMGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIGVVRAMGRTLVAAAPDALVVIADDHLNVFSFDAVPALCVRVGRSVSRMVQADAIEFDRALDGLPDRYPVHE |
Ga0137380_103536161 | 3300012206 | Vadose Zone Soil | MGRIVYAAAMSHVLSPDYYDKNVGPRGRKMVEELMDAVRAMGRTMLEAWPDALVVIADDHLNVFSFDAVPAFCVRIGQSVEKMVQDGAIEFDRA |
Ga0157295_102167331 | 3300012906 | Soil | MGKIVYAAAMSHVLAPDYYGKNVGPRGRKMVEELIDVVRVMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPERYPLHEALANRILERGLEDG |
Ga0126369_127215222 | 3300012971 | Tropical Forest Soil | MGRIVYAGTMSHVLYPDYYEKNVGPHGRKMVEELIEVVRDMGRTMLSARPDALVVIADDHLNVFSFDAIPAMCVRVGRSVDRMVQEDAIEFDRALD |
Ga0157378_122368862 | 3300013297 | Miscanthus Rhizosphere | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVQDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPERYD |
Ga0157375_120165592 | 3300013308 | Miscanthus Rhizosphere | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRYVERMVRADAIEFDRALDGLPERY |
Ga0134075_103423872 | 3300014154 | Grasslands Soil | MGRIVYAAAMSHVLYPDYYGENAGPHGRRTVEALIDVVRAMGRTLAAAAPDALVVIADDHLNVFSFDAVPALCVPIGRSVSRMVQ |
Ga0157380_109490001 | 3300014326 | Switchgrass Rhizosphere | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEDLIAVVKDMGRTLLTTAPDALVVVADDHLNVFSFDAIPALCVRVGRSVDRMVQDDAIE |
Ga0180084_10173574 | 3300014874 | Soil | MGKVVYAAAMSHVLYPDYYGKNVGPHGRKMVEELIDVVRNMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFD |
Ga0180063_10142351 | 3300014885 | Soil | MGKVVYAAAMSHVLYPDYYGKNVGPHGRRMVEELIAVVRDMGRDMLAAKPDALVVIADDHLNVFSFDAIPAMCVRIGRSVQRMVQDDAIEFDRALDVLPERYPLHEDLANRVLEQGMEAG |
Ga0157379_107961753 | 3300014968 | Switchgrass Rhizosphere | MGKVVYAAAMSHVLAPDYYGRNVGPHGRKMVEELIEVVRDMGRDLLAARPDALVVVADDHLNVFSFDAVPAMCVRIGRVVERMVQADAIEFDRALDGLPQRYPLHEDLANRILERGLDE |
Ga0173483_107970991 | 3300015077 | Soil | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVREMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPERYPLHEDLASRILERGLEEGFD |
Ga0173480_100599743 | 3300015200 | Soil | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPERYPLHEDLANRLLERGL |
Ga0180085_12498142 | 3300015259 | Soil | MGRIVFAAAMSHVLDPDYYGTHCGPRGRQMVQDLMARVGEMGTRMAAARPDALVVVADDHLNVFSFNAVPALCVRIGTHVERMEQDHAVAFDRLLDRLPLRYPLHEALASAVLAEGLEADFDLAL |
Ga0132256_1018958972 | 3300015372 | Arabidopsis Rhizosphere | MGQIVYAAAMSHVLYPDYYDQNVGPHGRRMVEELIDVVRDMGRTMLGARPDALVVIADDHLNVFSFDAIPAMCVRIGRSVDRMV |
Ga0132255_1000581156 | 3300015374 | Arabidopsis Rhizosphere | VSPGEQEVRTMGQIVYAAAMSHVLYPDYYDQNVGPHGRRMVEELIDVVRDMGRTMLGARPDALVVIADDHLNVFSFDAIPAMCVRIGRWVDRMVQEDAIEFDRALDG |
Ga0182038_103538982 | 3300016445 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIAVVREMGRMLAAAAPDALVVIADDHLNVFSFDAIPALCVRVGRTVSRMVQHDAIEFDR |
Ga0134083_105151041 | 3300017659 | Grasslands Soil | MGRIVYAAAMSHVLYPDYYSQNVGPHGRRMVEALIDVVRDMGRTLAAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMVQDNAIEFDRALEGLPERYPVHEDLANSILE |
Ga0187785_103289262 | 3300017947 | Tropical Peatland | MGRLVYAAAMSHVLYPDYYGDNVGPHGRRMVEALIAVVREMGQTLAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALDGLPER |
Ga0184608_103149881 | 3300018028 | Groundwater Sediment | MGRIVYAAAMSHVLYPDYYSQNVGPHGRRMVEALIDVVRDMGRTLAAAAPDALVVVADDHLNVFSFDAVPALCVRVGQSVNRMVQDDAIEFDRALEGLPERYPVHEALAERILADGLEAG |
Ga0187766_113267352 | 3300018058 | Tropical Peatland | MGQIVYAAAMSHVLSPDYYGKNVGPHGRRMVEELIEVVRAMGRDMLDAEPDALVVVADDHLNVFSFDAVPAMCVRIGRSVRRMEQEGAIEFDRALDGLPVRYRLHEDLANAVL |
Ga0184627_100544073 | 3300018079 | Groundwater Sediment | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEALIDVVRDMGRTLAAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMVQDDAIEFDRALEGLPE |
Ga0190265_137119462 | 3300018422 | Soil | MGRIVYAAAMSHVLSPDYYGKNVGPHGRAMVEELMDVVRVMGREMLERRPDALIVVADDHLNVFSFDAVPAFCVRIGRSVERMVQEGAIEFDRELETLPLRYALH |
Ga0066667_105811131 | 3300018433 | Grasslands Soil | MGRIVYAAAMSHVLHPPYYEKNVGPHGKRMVEELIAVVGEMGRELSARRPDALVIVADDHLNVFSFDAVPAMCVRIGRSVSRMSQE |
Ga0066669_118723241 | 3300018482 | Grasslands Soil | MGRIVYAAAMSHVLHPPYYDKNVGPHGRRMVEELITVVAEMGRELAARRPDALVVIADDHLNVFSFDAVPAMCVRIGRSVSRMAQEGAIEFDRALEGLPERYPLHEDLANRILE |
Ga0193717_12082902 | 3300020060 | Soil | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPVMCVRIGRFVERMI |
Ga0180109_12722261 | 3300020067 | Groundwater Sediment | MGRVVYAAAMSHVLHPPYYEKNVGPHGKRMVEDLIAVVNEMGRELAVRRPDALVVVADDHLNVFSFDAVPAMCVRIGRSVQRMAQEGAIEFDRALDGLAERYPVHEE |
Ga0126371_137916942 | 3300021560 | Tropical Forest Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELITVVREMGRTLAAAAPDALVVIADDHLNVFSFDAIPALCVRVGRTVNRMVQHDAIEFDRALDGLPERYPVHEDLPTRSSRRACRPDSTSRRRGRRRSTTPS |
Ga0247752_10658271 | 3300023071 | Soil | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPER |
Ga0207423_10411351 | 3300025535 | Natural And Restored Wetlands | VRDRVSRGARLLGQTVAVGQVVYAAAMSHVLYPDYYEKNVGPHGRAMVEELIAVVRDMGRDLLATRPDALVVIADDHLNVFSFDAIPAMCVRIGRSVRRMVQDGAIEFDQALEGLPERYPLHEDLANRVLEQGIE |
Ga0210108_10273013 | 3300025560 | Natural And Restored Wetlands | MGKVVYAAAMSHVLYPDYYGKNVGPHGRTMVEELIAVVRDMGRDLLAARPDALVVIADDHLNVFSFDAIPALCVRIGRSVERMVQDDAIEFDRALDGL |
Ga0207660_109801792 | 3300025917 | Corn Rhizosphere | MGRIVYAAAMSHVLYPDYYGQNVGSHGRRMVEDLITVVRDMGRTLLTTAPDALVVVADDHLNVFSFDAIPALCVRVGRSVNRMVQDDAIEFDRALDGLPERYLVHEDLANS |
Ga0207668_116744432 | 3300025972 | Switchgrass Rhizosphere | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIAVVRAMGRTLTSAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMIQADAIEFDRALDGLPERYPVHEDLANSILETGVQ |
Ga0209237_11524172 | 3300026297 | Grasslands Soil | MGRIVYAAAMSHVLYPDYYSQNVGPHGRRMVEALIEVVRDMGRTLAAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMVQDDAIEFDRALEGLP |
Ga0209238_10627792 | 3300026301 | Grasslands Soil | MGRIVYAAAMSHVLHPPYYEKNVGPHGKRMVEELIAVVGDMGRELAARRPDALVVVADDHLNVFSFDAVPAMCVRIGRSVSRMAQ |
Ga0209470_10214851 | 3300026324 | Soil | MGRIVYAAAMSHVLYPDYYGENVGPHGRRMVEELIGVVRAMGRTLMAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVSRMVQADAIEFDRALDGLPER |
Ga0209267_11855001 | 3300026331 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRQMVEALITVVREMGQTLAAAASDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALEG |
Ga0209158_10614713 | 3300026333 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRQMVEALITVVREMGQTLAAAASDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQGDAIEFDRALEGLPERYPVHED |
Ga0209158_11467911 | 3300026333 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPHGRQMVEALITVVREMGQTLAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALEG |
Ga0209057_10057338 | 3300026342 | Soil | MGRIVYAAAMSHVLYPDYYGENVGPHGRKMVEELIEVVRDMGRTLAAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVSRM |
Ga0257170_10618031 | 3300026351 | Soil | MGRIVYAAAMSHVLYPDYYSQNVGPHGRRMVEALIDVVRDMGRTLAAAAPDALVVVADDHLNVFSFDAVPAFCVRVGRSVNRMVQDDAIEFDRALEGLPERYPVHEDL |
Ga0209690_10145805 | 3300026524 | Soil | MGRIVYAAAMSHVLHPPYYEKNVGPHGKRMVEELIAVVGDMGRELAARRPDALVVVADDHLNVFSFDAVPAMCVRIGRSVSRMAQEGAIEFDRALD |
Ga0209161_103961951 | 3300026548 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRQMVEALITVVREMGQTLAAAASDALVVIADDHLNVFSFDAIPAFCVRVGRSVTRMVQDDAIE |
Ga0209161_105142482 | 3300026548 | Soil | MGRIVYAAAMSHVLYPDYYGENVGPHGRRMVEALIDVVRAMGRTLAAAAPDALVVIADDHLNVFSFDAVPALCVRIGRSVSRMVQDDAIEFDRALEGLPERYPVHEDLANS |
Ga0209898_10045901 | 3300027068 | Groundwater Sand | MGRIVYAAAMSHVLYPDYYGENVGPHGRRMVEALIDEVRDMGRTLAAAAPDALVVIADDHLNVFSFDAVPALCVRIGKTVSRMVQKDAIEFDRALEGLPERYPVHEDLANSILEK |
Ga0209897_10086613 | 3300027169 | Groundwater Sand | MGRIVYAAAMSHVLYPDYYGENVGPHGRRMVEALIDEVRDMGRTLAAAAPDALVVIADDHLNVFSFDAVPALCVRIGKTVSRMVQKDAIEFDRALEGLPERYPVHEDLANSILEKGLQAG |
Ga0210000_10256672 | 3300027462 | Arabidopsis Thaliana Rhizosphere | MSHVLHPPYYEKNVGPHGKRLVEELIAIVREMGDKLAARRPDALVVIADDHLNVFSFDAVPAMCVRIGRSVQRMAQEGAIELQTELGRIEAGP |
Ga0209968_10892392 | 3300027526 | Arabidopsis Thaliana Rhizosphere | MSHVLHPPYYEKNVGPHGKRLVEELIAIVREMGDKLAARRPDALVVIADDHLNVFSFDAVPAMCVRIGRSVQRMAQEG |
Ga0209011_11430272 | 3300027678 | Forest Soil | MGRIVYAAAMSHVLHPPYYEKNVGPHGKRMVEELIAVVGEMGRELSARRPDALVIVADDHLNVFSFDAVPAMCVRIGRSVSRAGGRGC |
Ga0209073_104607702 | 3300027765 | Agricultural Soil | MGRIVYAAAMSHVLHPPYYEKNVGPHGRRMVEDLIAVVNTMGRELQALRPDALVIVADDHLNVFSFDAVPAMCVRIGRSVSRMSQEGAIEFDRALEGLAER |
Ga0209590_105825802 | 3300027882 | Vadose Zone Soil | MGRIVYAAAMSHVLSPDYYDKNVGPHGRKMVEELMDVVRTMGRTMLEARPDALVVIADDHLNVFSFDAVPAFCVRIGQSVEKMVQDGAIEFDRALDGLPIRYA |
Ga0207428_100302624 | 3300027907 | Populus Rhizosphere | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIAVVRAMGGTLAAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMAQADAIEFDRAL |
Ga0209382_104042891 | 3300027909 | Populus Rhizosphere | MGAIVYAAAMSHVLYPDYYGKNVGPHGRRMVEALIAEVQAMGAALRAARPDALVVVADDHLNVFSYDAVPALCVRVGRSVDRMVQADAIEFDRAL |
Ga0209382_108719912 | 3300027909 | Populus Rhizosphere | MGRIVYAAAMSHVLHPPYYEKNVGPHGKRMVEELIAVVGEMGRELAARRPDALVVVADDHLNVFSLDAVPAMCVRIGRSVSRMAQQGAIE |
Ga0209382_112326501 | 3300027909 | Populus Rhizosphere | MGRIVYAAAMSHVLNPGYYEKNVGERGRRMVTDLMAVVRDMGRDLDERRPDAIVIVADDHLNVFSFDAVPAMCVRVGQSVKRMVQEDAIEFDRALDGLPERYPVHEALAERILADGLEAGFD |
Ga0209857_10386271 | 3300027957 | Groundwater Sand | MGRIVYAAAMSHVLYPDYYGENVGPHGRRMVEALIDEVRDMGRTLAAAAPDALVVIADDHLNVFSFDAVPALCVRIGKTVSRMVQEDAIEFDRALEGLPERYPVHEDLANSILEKGLQ |
Ga0268265_104229521 | 3300028380 | Switchgrass Rhizosphere | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEDLIAVVKDMGRTLLTTAPDALVVVADDHLNVFSFDAIPALCVRVGRSVDRMVQDDAIEFDRALDGLPERYPVHEDLAN |
Ga0268264_102517223 | 3300028381 | Switchgrass Rhizosphere | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPERYPLHEDLANRILERGLEDGFDFAAS |
Ga0299907_100936322 | 3300030006 | Soil | VGRIVFAAAMSHVLDPDYYGTNVGPAGRRMVEALMERVRAVGGRLTAERPHALVVVADDHLNVFSFNAVPALCVRIGRHVERMDQDHAVAFDRALEALPDR |
Ga0307498_100439712 | 3300031170 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEDLIAVVRDMGRTLLTTAPDALVVVADDHLNVFSFDAIPALCVRVGRSVNRMVQDDAIEFDRALDGLPERYPVHEDLANSILEKGMQSG |
Ga0307497_100092814 | 3300031226 | Soil | MGRIVYAAAMSHVLYPDYYGHNVGPHGRRMVEDLIAVVRDMGRTLLTTEPDALVVVADDHLNVFSFDAIPALCVRVGRSVDRMVQDDAIEFDRALDGLPERY |
(restricted) Ga0255312_10548672 | 3300031248 | Sandy Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIAEVRDMGRTLAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALEGL |
Ga0318541_102701892 | 3300031545 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPFGRQMVEALIAVVREMGAALAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALDGLPGRYAVHEDLAN |
Ga0318538_107166211 | 3300031546 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIAVVREMGRMLAAAAPDALVVIADDHLNVFSFDAIPALCVRVGRTVSRMVQHDAIEFDRALDGLPERYLVHEDLANAILEKGV |
Ga0318528_103994572 | 3300031561 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPFGRQMVEALIAVVREMGAALAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQD |
Ga0318573_101927561 | 3300031564 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPFGRQMVEALIAVVREMGAALAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEF |
Ga0310915_101064293 | 3300031573 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIAVVREMGRMLAAAAPDALVVIADDHLNVFSFDAIPALCVRVGRTVSRMVQHDAIEFDRALDGLPERYLVHEDL |
Ga0307469_102033113 | 3300031720 | Hardwood Forest Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIGVVRAMGRALTAAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVSRMVQADAIEFDRALDGLPERYPVHE |
Ga0307469_112385392 | 3300031720 | Hardwood Forest Soil | MGKIVYAAAMSHVLHPDYYGQNVGPHGRRMVEELIAVVRAMGRTLTSAAPDALVVVADDHLNVFSFDAVPALCVRVGRSVNRMIQADAIEFDRALDGLPERY |
Ga0307405_104139461 | 3300031731 | Rhizosphere | MGRIVYAAAMSHVLSPDYYGKNVGPHGRVMVEELMSVVRVMGEEMLARRPEALVVIADDHLNVFSFDAVPAFCVRIGRSVQKMEQDGAIEFDRAL |
Ga0307468_1009640331 | 3300031740 | Hardwood Forest Soil | MGHIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRSMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRHVERMIQ |
Ga0318492_101669001 | 3300031748 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPFGRQMVEALIAVVREMGASLAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQD |
Ga0318546_109321752 | 3300031771 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPFGRQMVEALIAVVREMGAALAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALDGLPGRYAVHEDLANSILEKGMQS |
Ga0307473_104555922 | 3300031820 | Hardwood Forest Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRQMVEALITVVREMGQTLAAAASDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALEGLPERYPVHEDLANSILDKG |
Ga0306919_100171911 | 3300031879 | Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIAVVREMGRMLAAAAPDALVVIADDHLNVFSFDAIPALCVRVGRTVSRMVQHDAIEFDRALDGLPERYLVHEDLANAILEKGVQ |
Ga0306925_115800212 | 3300031890 | Soil | MGRIVYAAAMSHVLYPDYYDKNVGPHGRKMVEELIEVVRDMGRTMLSARPDALVVIADDHLNVFSFDAIPAMCVRIGRSVDRMVQEDAIE |
Ga0306925_119979802 | 3300031890 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPFGRQMVEALIAVVREMGAALAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALDGLPGR |
Ga0307407_105756912 | 3300031903 | Rhizosphere | MGRIVYAAAMSHVLSPDYYGKNVGPHGRVMVEELMSVVRVMGEEMLARRPEALVVIADDHLNVFSFDAVPAFCVRIGRSVQKMEQDGAIEFDRALEGLPVR |
Ga0307416_1015749882 | 3300032002 | Rhizosphere | MGRVVYAAAMSHVLHPPYYEKNVGPQGKRMVEELIGVVGEMGRELADRRPDALVVVADDHLNVFSFDAVPAMCVRIGRSVQRMAQEG |
Ga0307470_107382552 | 3300032174 | Hardwood Forest Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRRMVEELIAVVREMGRSLTAAAPDALVVVADDHLNVFSFDAIPALCVRVGRSVNRMIQDGAIEFDRALEGLPERYPVHEDLANSILEKG |
Ga0307471_1027330532 | 3300032180 | Hardwood Forest Soil | MGRIVYAAAMSHVLYPDYYEKNVGAHGRQMVEELIDVVRDMGRAMLHARPDALVVVADDHLNVFSFDAIPAMCVRIGRWVERMVQ |
Ga0307472_1020842691 | 3300032205 | Hardwood Forest Soil | MGRIVYAAAMSHVLYPDYYGQNVGPHGRQMVEALITVVREMGQTLAAAASDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQDDAIEFDRALEGLPERYPVHEDLANSILDK |
Ga0315286_106157631 | 3300032342 | Sediment | MGKVVYAAAMSHVLYPDYYGKNVGPHGRRMVEELIDVVRDMGRDMLAARPDALIVIADDHLNVFSFDAIPAMCVRIGRSVQRMVQDGAIEFDRALDGLPERYPLHEGLANRVLE |
Ga0335082_101633685 | 3300032782 | Soil | MGQLVYAAAMSHVLYPDYYGKNVGPHGRKMVEELIAVVQEMGRELRATRPDALVVIADDHLNVFSFDAIPAMCVRIGRSVERMV |
Ga0335082_102298345 | 3300032782 | Soil | MGKVVYAAAMSHVLYPDYYEKNVGPHGRAMVEELIAVVRDMGRDLLAARPDALVVIADDHLNVFSFDAIPALCVRIGRSVERMVQDDAIEF |
Ga0318519_107950001 | 3300033290 | Soil | MGRIVYAAAMSHVLYPDYYGDNVGPFGRQMVEALIAVVREMGAALAAAAPDALVVIADDHLNVFSFDAIPAFCVRVGRSVNRMVQ |
Ga0326723_0106864_2_343 | 3300034090 | Peat Soil | VGKVVYAAAMSHVLYPDYYEKNVGPHGRAMVEELIAVVRDMGRDLLAARPDALVVIADDHLNVFSFDAIPALCVRIGRSVERMVQDDAIEFDRALDGLPQRYLLHEDLANRILE |
Ga0364925_0346368_1_294 | 3300034147 | Sediment | MGQVVFAAAMSHVLDPDYYGTHCGPRGRQMVEELMRRVGVLGARMMAARPDALVVVADDHLNVFSFNAVPALCVRIGTHVERMEQDHAVAFDRLLDRL |
Ga0364927_0249074_181_531 | 3300034148 | Sediment | MGQVVFAAAMSHVLDPDYYGTHCGPRGRQMVEELMRRVGVLGARMMAARPDALVVVADDHLNVFSFNAVPALCVRIGTHVERMEQDHAVAFDRLLDRLPRRYPLHESLANAVLEGGL |
Ga0370495_0137396_442_771 | 3300034257 | Untreated Peat Soil | MGKIVYAAAMSHVLAPDYYGKNVGPHGRKMVEELIDVVRDMGRTMLAARPDALVVIADDHLNVFSFDAVPAMCVRIGRFVERMVQADAIEFDRALDGLPERYALHEDLAN |
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