Metagenome / Metatranscriptome Family F070443

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F070443
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	113 residues
Representative Sequence	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR
Number of Associated Samples	119
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.46 %
% of genes near scaffold ends (potentially truncated)	43.90 %
% of genes from short scaffolds (< 2000 bps)	56.91 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.057 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.008 % of family members)
Environment Ontology (ENVO)	Unclassified (23.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.27% β-sheet: 0.00% Coil/Unstructured: 80.73%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00589	Phage_integrase	55.28
PF14319	Zn_Tnp_IS91	26.02
PF00719	Pyrophosphatase	0.81
PF00486	Trans_reg_C	0.81
PF04392	ABC_sub_bind	0.81
PF04986	Y2_Tnp	0.81
PF05598	DUF772	0.81
PF03739	LptF_LptG	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.81
COG0795	Lipopolysaccharide export LptBFGC system, permease protein LptF	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.06 %
Unclassified	root	N/A	8.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.06 %
Unclassified	root	N/A	8.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.06 %
Unclassified	root	N/A	8.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.28 %
Unclassified	root	N/A	8.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.21 %
Unclassified	root	N/A	8.94 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.63 %

Name	Rank	Taxonomy	Distribution
Magnetococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales	26.02 %
Unclassified	root	N/A	8.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.69 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %

Name	Rank	Taxonomy	Distribution
Magnetococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae	26.02 %
Unclassified	root	N/A	8.94 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	5.69 %
Herpetosiphonales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales	1.63 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Magnetococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus	26.02 %
Unclassified	root	N/A	8.94 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	5.69 %
Herpetosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae	1.63 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.81 %

Name	Rank	Taxonomy	Distribution
Magnetococcus marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	24.39 %
Unclassified	root	N/A	8.94 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	5.69 %
Herpetosiphon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon	1.63 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Magnetococcus marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	24.39 %
Unclassified	root	N/A	8.94 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	5.69 %
Herpetosiphon aurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus	1.63 %
Rhizobium mongolense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense	0.81 %

Name	Rank	Taxonomy	Distribution
Magnetococcus marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	24.39 %
Unclassified	root	N/A	8.94 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	5.69 %
Herpetosiphon aurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus	1.63 %
Rhizobium mongolense USDA 1844	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense → Rhizobium mongolense USDA 1844	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig02733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus	2426	Open in IMG/M
3300001593\|JGI12635J15846_10076268	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300001650\|JGI20280J16326_100287	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300003223\|JGI26343J46809_1000434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus	2368	Open in IMG/M
3300003505\|JGIcombinedJ51221_10143650	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300005105\|Ga0066812_1000166	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300005161\|Ga0066807_1002610	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300005162\|Ga0066814_10010357	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005163\|Ga0066823_10002099	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300005169\|Ga0066810_10001486	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300005450\|Ga0066682_10153563	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300005558\|Ga0066698_10044122	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300005610\|Ga0070763_10834669	Not Available	546	Open in IMG/M
3300005921\|Ga0070766_10400787	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300006028\|Ga0070717_11149072	Not Available	707	Open in IMG/M
3300006041\|Ga0075023_100035586	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300006047\|Ga0075024_100026779	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300006059\|Ga0075017_100393305	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300006086\|Ga0075019_10087343	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300006086\|Ga0075019_10113663	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300006174\|Ga0075014_100039839	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300006578\|Ga0074059_10021976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus	2557	Open in IMG/M
3300006579\|Ga0074054_12139362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → Herpetosiphon → Herpetosiphon aurantiacus	1691	Open in IMG/M
3300007788\|Ga0099795_10439923	Not Available	599	Open in IMG/M
3300009143\|Ga0099792_10794847	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300009524\|Ga0116225_1027362	All Organisms → cellular organisms → Bacteria	2863	Open in IMG/M
3300009839\|Ga0116223_10050834	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300010154\|Ga0127503_10537545	All Organisms → cellular organisms → Bacteria	2338	Open in IMG/M
3300010343\|Ga0074044_10393652	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300011120\|Ga0150983_13864202	Not Available	592	Open in IMG/M
3300012019\|Ga0120139_1024931	All Organisms → cellular organisms → Bacteria → Proteobacteria	1376	Open in IMG/M
3300012200\|Ga0137382_10814348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	672	Open in IMG/M
3300012683\|Ga0137398_10081538	All Organisms → cellular organisms → Bacteria → Proteobacteria	1997	Open in IMG/M
3300012951\|Ga0164300_10879629	Not Available	564	Open in IMG/M
3300012957\|Ga0164303_10143506	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300012984\|Ga0164309_10256007	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300012986\|Ga0164304_11149409	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300014164\|Ga0181532_10056247	All Organisms → cellular organisms → Bacteria	2574	Open in IMG/M
3300015193\|Ga0167668_1074842	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300015242\|Ga0137412_10105223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2292	Open in IMG/M
3300015374\|Ga0132255_100472038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1839	Open in IMG/M
3300017822\|Ga0187802_10041466	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300017823\|Ga0187818_10025961	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300017927\|Ga0187824_10028518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1672	Open in IMG/M
3300017930\|Ga0187825_10013820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2701	Open in IMG/M
3300017932\|Ga0187814_10091020	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300017934\|Ga0187803_10080141	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300017936\|Ga0187821_10046853	All Organisms → cellular organisms → Bacteria → Proteobacteria	1545	Open in IMG/M
3300017942\|Ga0187808_10020188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2692	Open in IMG/M
3300017943\|Ga0187819_10043753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2652	Open in IMG/M
3300017955\|Ga0187817_10307389	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300017993\|Ga0187823_10010886	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
3300018006\|Ga0187804_10017907	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300018007\|Ga0187805_10025553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2603	Open in IMG/M
3300018067\|Ga0184611_1012453	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300018469\|Ga0190270_10408157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1260	Open in IMG/M
3300018469\|Ga0190270_10866219	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300019875\|Ga0193701_1062643	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300019877\|Ga0193722_1013037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2124	Open in IMG/M
3300019996\|Ga0193693_1008449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2137	Open in IMG/M
3300020580\|Ga0210403_10090664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2472	Open in IMG/M
3300020582\|Ga0210395_10345308	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300020583\|Ga0210401_10123647	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300021170\|Ga0210400_10096621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2336	Open in IMG/M
3300021180\|Ga0210396_10198172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1794	Open in IMG/M
3300021181\|Ga0210388_10174721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1873	Open in IMG/M
3300021401\|Ga0210393_10089349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2446	Open in IMG/M
3300021407\|Ga0210383_10106450	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300021433\|Ga0210391_10123315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2039	Open in IMG/M
3300021475\|Ga0210392_10054301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2481	Open in IMG/M
3300021559\|Ga0210409_11110973	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300022726\|Ga0242654_10362447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	548	Open in IMG/M
3300022734\|Ga0224571_111309	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300025134\|Ga0207416_1013717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4766	Open in IMG/M
3300025320\|Ga0209171_10141379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1419	Open in IMG/M
3300025939\|Ga0207665_10576150	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300026844\|Ga0208760_102223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	562	Open in IMG/M
3300026857\|Ga0208893_1000052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1840	Open in IMG/M
3300026995\|Ga0208761_1003188	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300027076\|Ga0208860_1012252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense → Rhizobium mongolense USDA 1844	811	Open in IMG/M
3300027090\|Ga0208604_1003316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1509	Open in IMG/M
3300027095\|Ga0208606_100085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2469	Open in IMG/M
3300027497\|Ga0208199_1007838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2581	Open in IMG/M
3300027570\|Ga0208043_1014922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2539	Open in IMG/M
3300027583\|Ga0209527_1065698	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300027587\|Ga0209220_1088778	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300027604\|Ga0208324_1014596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2500	Open in IMG/M
3300027625\|Ga0208044_1016526	All Organisms → cellular organisms → Bacteria → Proteobacteria	2697	Open in IMG/M
3300027674\|Ga0209118_1016330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2427	Open in IMG/M
3300027698\|Ga0209446_1002435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4532	Open in IMG/M
3300027889\|Ga0209380_10314259	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300028015\|Ga0265353_1000230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2546	Open in IMG/M
3300028023\|Ga0265357_1039392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	552	Open in IMG/M
3300028047\|Ga0209526_10035947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3488	Open in IMG/M
3300028608\|Ga0247819_10190959	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300028791\|Ga0307290_10120201	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300028889\|Ga0247827_10794100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	626	Open in IMG/M
3300028906\|Ga0308309_10080947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2455	Open in IMG/M
3300030494\|Ga0310037_10028803	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
3300030531\|Ga0210274_1413766	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300030707\|Ga0310038_10055143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2220	Open in IMG/M
3300030740\|Ga0265460_11212556	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300031040\|Ga0265754_1000049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2909	Open in IMG/M
3300031170\|Ga0307498_10351400	Not Available	566	Open in IMG/M
3300031199\|Ga0307495_10024234	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300031231\|Ga0170824_121260848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	690	Open in IMG/M
3300031366\|Ga0307506_10052895	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300031446\|Ga0170820_12939521	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300031753\|Ga0307477_10410388	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031754\|Ga0307475_11467113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	524	Open in IMG/M
3300032013\|Ga0310906_10067589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1840	Open in IMG/M
3300032174\|Ga0307470_10023181	All Organisms → cellular organisms → Bacteria	2835	Open in IMG/M
3300032174\|Ga0307470_10199713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	1276	Open in IMG/M
3300032180\|Ga0307471_100843519	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300032180\|Ga0307471_100910935	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300033433\|Ga0326726_10108196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2497	Open in IMG/M
3300033500\|Ga0326730_1009941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2104	Open in IMG/M
3300033550\|Ga0247829_10078002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → Magnetococcaceae → Magnetococcus → Magnetococcus marinus	2430	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.75%
Host-Associated	Host-Associated	2.44%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.61%
Aquatic	Environmental → Aquatic	21.14%
Plants	Host-Associated → Plants	2.44%
Modeled	Engineered → Modeled	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.98%
Freshwater	Environmental → Aquatic → Freshwater	13.82%
Sediment	Environmental → Aquatic → Sediment	5.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.63%
Peat	Environmental → Terrestrial → Peat	1.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.72%
Loam	Environmental → Terrestrial → Soil → Loam	15.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.44%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.13%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.44%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.81%
Hydrocarbon Resource Environments	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Hydrocarbon Resource Environments	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.81%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.81%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001650	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046	Environmental	Open in IMG/M
3300002853	PDIso9.ppmwps2	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026844	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA (SPAdes)	Environmental	Open in IMG/M
3300026857	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027095	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF020 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0733.00000250	2166559005	Simulated	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADTPARSPQRLHPYGEAV
JGI12635J15846_100762681	3300001593	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQS
JGI20280J16326_1002871	3300001650	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGREPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR*
draft_10069612	3300002853	Hydrocarbon Resource Environments	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQALCPGTDQI
JGI26343J46809_10004341	3300003223	Bog Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCRSVESGLGD
JGIcombinedJ51221_101436501	3300003505	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGXEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR*
Ga0066812_10001663	3300005105	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR*
Ga0066807_10026101	3300005161	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDHAFYGEAVQSNTRPVF
Ga0066814_100103572	3300005162	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRR*
Ga0066823_100020991	3300005163	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGSVEMRLDDVKTEG*
Ga0066672_108407242	3300005167	Soil	MIGLEGATCNTALITEMEEIGANLLLAEHVGRALVVGSEPTDRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIP
Ga0066810_100014864	3300005169	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNEIRVSAERSRRRNSVGLNA
Ga0066682_101535632	3300005450	Soil	VIGLECATRNTALIAQMKEIGANLLLTEHIGRAHVVGREPADCLDVDVPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELGPGTRADTPARSPQRLHPPYGEAVQSNRCRSVESGLGDVKTGGYVPLFVEH*
Ga0066698_100441223	3300005558	Soil	MIGLEGATCNTALIPEMQEIGANILLAEHIGRAHVMGSEPADRLDIDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKCQDLCPGTDQIPQPAALNDYAFYGEAVQSNRCRSVESGLGDVKTGG*
Ga0070763_108346691	3300005610	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRLQRA
Ga0070766_104007872	3300005921	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNGRLRIVCNS
Ga0070717_111490721	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTAQIPQNAVLNDYAFYGEAVQSNRCRSVES
Ga0075023_1000355862	3300006041	Watersheds	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNGSCVVL*
Ga0075024_1000267793	3300006047	Watersheds	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNLRRSIETHSDDIKTEVSLLLQEEYGGDLPTGHAVSGV*
Ga0075017_1003933051	3300006059	Watersheds	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADTPARSPQRIQPYGEAVQSNLRFVREELLGPNVSCGNPSPDR*
Ga0075019_100873431	3300006086	Watersheds	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADTPARSPQRIQPYGEAVQSNR*
Ga0075019_101136632	3300006086	Watersheds	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRRLQAPANLVAEVRRRATV*
Ga0075014_1000398393	3300006174	Watersheds	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNWR*
Ga0074059_100219763	3300006578	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRLQHRVANSRSPVAAHWPRRAHRARA
Ga0074054_121393623	3300006579	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNL
Ga0099795_104399232	3300007788	Vadose Zone Soil	MIGLEGATCNTAFIPEMEEIGANLLLAEHIGRAHVVGSEPADRLDVDVPGPLGKAGKLHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNRR*
Ga0099792_107948471	3300009143	Vadose Zone Soil	MIGLEGATCNTALIPEMKEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKLHVVDHTLTQRGHGRSPFGFKRQNLCPGTDQIPQPAALNDSTPYGEAV
Ga0116225_10273624	3300009524	Peatlands Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYALYGEAVQAAEIGASAEARRTRSEFIG
Ga0116223_100508343	3300009839	Peatlands Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNHSACKSRCVADERCQLPRRDGMTGRQRA*
Ga0127503_105375453	3300010154	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRC*
Ga0074044_103936522	3300010343	Bog Forest Soil	MIGLEGATCNTALIPEMEEIGASILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCRSVESGLGDVRTGG*
Ga0150983_138642021	3300011120	Forest Soil	MEEIGANILLAEHIGRALVVGREPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR*
Ga0120139_10249313	3300012019	Permafrost	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTAQIPQHAVLNDYAFYGEAVQSNRCGSVEMRLDDVKTEG*
Ga0137382_108143482	3300012200	Vadose Zone Soil	MIGLEGATCNTAFIPEMEEIGANLLLAEHIGRAHVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRR*
Ga0137398_100815381	3300012683	Vadose Zone Soil	MIGLEGATCNTAFIPEMEEIGANLVLAEHIGRAHVVGSEPADRLDVDVPGPLGKAGKLHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDSTPYGEAVQSNRSSILSCRIFGRKTGFHFS
Ga0164300_108796292	3300012951	Soil	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADIPARSPQRLHPYGEAVQSNRCRSVESGLGDVETGG*
Ga0164303_101435061	3300012957	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRDFVAPPLNP
Ga0164309_102560073	3300012984	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNHG*
Ga0164304_111494091	3300012986	Soil	MIGLEGATCNTALIPEMEEIGANLLLAEHIGRAHVVGSQPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYG
Ga0181532_100562474	3300014164	Bog	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNQ*
Ga0167668_10748422	3300015193	Glacier Forefield Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNHRLRLIFSTSRVST
Ga0137412_101052232	3300015242	Vadose Zone Soil	MIGLEGATCNTAFIPEMEEIGANLLLAEHIGRAHVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNRR*
Ga0132255_1004720381	3300015374	Arabidopsis Rhizosphere	MKEIGANLLLAEYIGRAHVVGREPADCLDVDVPGPLSKTGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNRR*
Ga0187802_100414661	3300017822	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRR
Ga0187818_100259613	3300017823	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRQ
Ga0187824_100285181	3300017927	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR
Ga0187825_100138202	3300017930	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRRLQAPANLVAGEEVRRRATV
Ga0187814_100910202	3300017932	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRPFLNGLSC
Ga0187803_100801413	3300017934	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNC
Ga0187821_100468532	3300017936	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRLRIARPANRSVLQPGFETLGWAYSGGQL
Ga0187808_100201881	3300017942	Freshwater Sediment	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADTPARSPQRIQPYGEAVQSNRCGSVEMRLDDVKTEG
Ga0187819_100437533	3300017943	Freshwater Sediment	MIGLEGATCKTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRRSARSVGSFT
Ga0187817_103073891	3300017955	Freshwater Sediment	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADTPASSPQRIQPYGEAVQSNRR
Ga0187823_100108862	3300017993	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQILQHAVLNDYAFYGEAVQSNRR
Ga0187804_100179074	3300018006	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSN
Ga0187805_100255533	3300018007	Freshwater Sediment	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCRSVESGLGDVKTGG
Ga0184611_10124534	3300018067	Groundwater Sediment	MIGLEGATCNTALIPEMEEIGANLLLAEHIGRAHVVDSQPADRLDVNVPGPLGKAGKPHVVDHTLTQRGHSRSPFGFKRQDLCPGTDQIPQ
Ga0190270_104081571	3300018469	Soil	VIGLEGTTRNTALIAQMKEIGTNLLLAEHIGRAHVVGGEPADCLDVDVPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQEDSVPAPEQIHQPAALNDSTPYGEAVQSNRR
Ga0190270_108662191	3300018469	Soil	MIGLEGATCNTALIPEMEEIGTNLLLAEHIGRAHVVDSEPADRLDVDVPGSLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNRR
Ga0193701_10626432	3300019875	Soil	VIGLECATRNTALIAQMKEIGANLLLTEHIGRAHVVGREPADCLDVDVPGPLSKTGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLN
Ga0193722_10130372	3300019877	Soil	MIGLEGATCNTAFIPEMEEIGANLLLAEHIGRAHVVGSEPADRLDVDVPGPLGKAGKLHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNRR
Ga0193693_10084491	3300019996	Soil	MIGLEGATCNTAFIPEMEEIGANLLLAEHIGRAHVVGSEPADRLDVDVPGPLGKAGKLHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNRW
Ga0210403_100906643	3300020580	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGSVEMRL
Ga0210395_103453082	3300020582	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGREPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR
Ga0210401_101236474	3300020583	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRLFLA
Ga0210400_100966213	3300021170	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRTLVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR
Ga0210396_101981721	3300021180	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRTLVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGSV
Ga0210388_101747211	3300021181	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNH
Ga0210393_100893493	3300021401	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNREGW
Ga0210383_101064504	3300021407	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGS
Ga0210391_101233151	3300021433	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNGSC
Ga0210392_100543013	3300021475	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSKHW
Ga0210409_111109732	3300021559	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGSVEIGLGD
Ga0242654_103624472	3300022726	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKPGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSN
Ga0224571_1113092	3300022734	Rhizosphere	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHA
Ga0207416_10137173	3300025134	Iron-Sulfur Acid Spring	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDCEIQWNADTDSSARRTAIR
Ga0209171_101413791	3300025320	Iron-Sulfur Acid Spring	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNP
Ga0207665_105761502	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MIGLEGATCNTAFIPEMEEIGANFLLAEHIGRAHVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGSVEMRLDDVKTEG
Ga0208760_1022231	3300026844	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYG
Ga0208893_10000523	3300026857	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVL
Ga0208761_10031881	3300026995	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRR
Ga0208365_10495402	3300027070	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQELCPGTDQ
Ga0208860_10122522	3300027076	Forest Soil	VIGLEGATRDTALIAQMKEIGANLLLTEHIGRAHVVGRNPADCLDVNVAGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNR
Ga0208604_10033163	3300027090	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNHP
Ga0208606_1000853	3300027095	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGSVEM
Ga0208199_10078383	3300027497	Peatlands Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRA
Ga0208043_10149221	3300027570	Peatlands Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNHRE
Ga0209527_10656982	3300027583	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNDVYGTTRYTL
Ga0209220_10887781	3300027587	Forest Soil	MIGLEGATCNTALIPEMEKIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNEIR
Ga0208324_10145961	3300027604	Peatlands Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQAAEIGAS
Ga0209528_11056751	3300027610	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQ
Ga0208044_10165261	3300027625	Peatlands Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAV
Ga0209118_10163303	3300027674	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGE
Ga0209446_10024353	3300027698	Bog Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCRSVESGLGDVETGG
Ga0209380_103142591	3300027889	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGRVEKRLDDVKTEG
Ga0265353_10002303	3300028015	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNLQRRLLDEA
Ga0265357_10393921	3300028023	Rhizosphere	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNHWHRVHLR
Ga0209526_100359471	3300028047	Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGCSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCRSVESGLGDVKTGG
Ga0247819_101909593	3300028608	Soil	MIGLEGATCNTALIPEMEEIGTNLLLAEHIGRAHVVDSEPADRLDVDVPGSLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNWPKPPDMIRTKE
Ga0307290_101202012	3300028791	Soil	VIGLECTTRNTALIAQMKEIGANLLLAEHIGRAHVVGSQPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNERSTST
Ga0247827_107941001	3300028889	Soil	MIGLEGATCNTALIPEMEEIGTNLLLAEHIGRAHVVDSEPADRLDVDVPGSLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNCP
Ga0308309_100809473	3300028906	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRGLG
Ga0310037_100288032	3300030494	Peatlands Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRAFLTSTSSLAP
Ga0210274_14137661	3300030531	Soil	IGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNHSFGNASLIQVKGPR
Ga0310038_100551431	3300030707	Peatlands Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGSVEMR
Ga0265460_112125562	3300030740	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRGLFAKTSNSAVSG
Ga0265754_10000493	3300031040	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNGSCVAL
Ga0307498_103514001	3300031170	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNRCGSVEMRLDDVKTEG
Ga0307500_103144721	3300031198	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTGADTPTRSLQRLHPLR
Ga0307495_100242341	3300031199	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCA
Ga0170824_1212608482	3300031231	Forest Soil	MIGLEGATCNTALIPEMEEIGANLLLAEHIGRAHVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSNLPCSTLTSSHLPIR
Ga0307506_100528951	3300031366	Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSEPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNRRFLEPPLDGLHRNWSPQTTPHPLRQTIDGM
Ga0170820_129395211	3300031446	Forest Soil	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADTPARSPQRLHPYGEAVQSNRR
Ga0307477_104103881	3300031753	Hardwood Forest Soil	VIGLEGATRDTALIAQMKEIGANLLLTEHIGRAHVVGRNPADCLDVNVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQELCPGTDQIPQHAVLNDYAFYGEAVQSNRCRSVESGLGDVETGG
Ga0307475_114671132	3300031754	Hardwood Forest Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRALVVGSDPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQHAVLNDYAFYGEAVQSN
Ga0310906_100675893	3300032013	Soil	VIGLEGTTRNTALIAQMKEIGANLLLAEHIGRAHVVGGEPADCLDVDVPGPLSKTGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNCF
Ga0307470_100231812	3300032174	Hardwood Forest Soil	MIGLEGATCNTAFIPEMEEIGANLLLAEHIGRAHVVGSQPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNCF
Ga0307470_101997133	3300032174	Hardwood Forest Soil	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADTPARSPQRIQPYGEAVQSNRGETASAVLQRRGWS
Ga0307471_1008435192	3300032180	Hardwood Forest Soil	VIGLEGATRNTALIAQMKEIGANLLLAEHIGRTHVVGRKPADRLDVDIPGPLSKTGKPHVVDHTLTQRGHGRSPFEFRHQELCPGTRADTPARSPQRLHPYGEAVQSNRRLQAPANLVAE
Ga0307471_1009109351	3300032180	Hardwood Forest Soil	MIGLEGATCNTAFIPEMEEIGANLLLAEHIGRAHVVGSQPADRLDVDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVQSNRCRSVESGLGGVKTGG
Ga0326726_101081961	3300033433	Peat Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRAHVMGSEPADRLDIDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKCQDLCPGTDQIPQPAALNDYAFYGEAVQSNEIRVSAERSRRRNSVGLN
Ga0326730_10099413	3300033500	Peat Soil	MIGLEGATCNTALIPEMEEIGANILLAEHIGRAHVMGSEPADRLDIDVPGPLGKAGKPHVVDHTLTQRGHGRSPFGFKCQDLCPGTDQIPQPAALNDYAFYGEAVQSNRR
Ga0247829_100780021	3300033550	Soil	MIGLEGATCNTALIPEMEEIGTNLLLAEHIGRAHVVDSEPADRLDVDVPGSLGKAGKPHVVDHTLTQRGHGRSPFGFKRQDLCPGTDQIPQPAALNDCASYGEAVPSNRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070443

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences