Metagenome Family F070240

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070240
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	92 residues
Representative Sequence	VKDRAGKPLAAKARLQILLGTLVVGCWKRTAMVQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP
Number of Associated Samples	109
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.56 %
% of genes near scaffold ends (potentially truncated)	87.80 %
% of genes from short scaffolds (< 2000 bps)	91.06 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.561 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.821 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (32.520 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 2.56% β-sheet: 42.74% Coil/Unstructured: 54.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.37.1.0: automated matches	d2nr8a_	2nr8	0.66297
c.37.1.0: automated matches	d4a14a_	4a14	0.63722
c.37.1.9: Motor proteins	d1ry6a_	1ry6	0.62945
c.37.1.0: automated matches	d2vvga_	2vvg	0.62207
c.37.1.0: automated matches	d3dc4a1	3dc4	0.61366

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF04311	DUF459	63.41
PF13472	Lipase_GDSL_2	8.13
PF14378	PAP2_3	3.25
PF03062	MBOAT	2.44
PF03706	LPG_synthase_TM	1.63
PF00676	E1_dh	0.81
PF02852	Pyr_redox_dim	0.81
PF01250	Ribosomal_S6	0.81
PF02548	Pantoate_transf	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	63.41
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	1.63
COG0360	Ribosomal protein S6	Translation, ribosomal structure and biogenesis [J]	0.81
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.81
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.81
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.87 %
Unclassified	root	N/A	2.44 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.24 %
Unclassified	root	N/A	2.44 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.63 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	85.37 %
Unclassified	root	N/A	2.44 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.63 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	84.55 %
Unclassified	root	N/A	2.44 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.63 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	84.55 %
Unclassified	root	N/A	2.44 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.63 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02JBF5K	Not Available	591	Open in IMG/M
3300002120\|C687J26616_10050575	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300002124\|C687J26631_10014653	All Organisms → cellular organisms → Bacteria	2783	Open in IMG/M
3300002407\|C687J29651_10215918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300004019\|Ga0055439_10068903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300004058\|Ga0055498_10019212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300004058\|Ga0055498_10104294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300004156\|Ga0062589_100266800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1297	Open in IMG/M
3300004463\|Ga0063356_105182052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300004782\|Ga0062382_10143940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1001	Open in IMG/M
3300005093\|Ga0062594_101853697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300005328\|Ga0070676_10044832	All Organisms → cellular organisms → Bacteria	2575	Open in IMG/M
3300005332\|Ga0066388_108592670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300005334\|Ga0068869_100910377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300005341\|Ga0070691_10823801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300005341\|Ga0070691_11096190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300005441\|Ga0070700_100293433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300005441\|Ga0070700_101256405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300005455\|Ga0070663_101009956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300005617\|Ga0068859_101360093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300005764\|Ga0066903_104563826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300005764\|Ga0066903_106261287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300005842\|Ga0068858_101786580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300005844\|Ga0068862_100383970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1311	Open in IMG/M
3300006237\|Ga0097621_100524712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300006237\|Ga0097621_101721231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300006845\|Ga0075421_100862151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1037	Open in IMG/M
3300006854\|Ga0075425_100047264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4812	Open in IMG/M
3300006880\|Ga0075429_100912145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300009098\|Ga0105245_12256084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300009147\|Ga0114129_11604582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300009147\|Ga0114129_12556643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300009176\|Ga0105242_12704525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300009806\|Ga0105081_1082449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300009817\|Ga0105062_1013152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1329	Open in IMG/M
3300010373\|Ga0134128_11249633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300011119\|Ga0105246_10023048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4025	Open in IMG/M
3300012893\|Ga0157284_10018932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1316	Open in IMG/M
3300012895\|Ga0157309_10144895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300012897\|Ga0157285_10144632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300012900\|Ga0157292_10291191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300012902\|Ga0157291_10077723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300012971\|Ga0126369_13100704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300014324\|Ga0075352_1140455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300014326\|Ga0157380_11221917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300015200\|Ga0173480_10087061	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300015258\|Ga0180093_1103312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300015372\|Ga0132256_100750347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300015372\|Ga0132256_103221199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300015373\|Ga0132257_101202920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	959	Open in IMG/M
3300017965\|Ga0190266_10382454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300018063\|Ga0184637_10121005	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300018067\|Ga0184611_1088374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1068	Open in IMG/M
3300018081\|Ga0184625_10311573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300018469\|Ga0190270_12884836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300019356\|Ga0173481_10385231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300019356\|Ga0173481_10614370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300019362\|Ga0173479_10512059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300019884\|Ga0193741_1055523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300020200\|Ga0194121_10191363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1122	Open in IMG/M
3300022901\|Ga0247788_1083639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300025155\|Ga0209320_10019473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3302	Open in IMG/M
3300025155\|Ga0209320_10297814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300025159\|Ga0209619_10294637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300025160\|Ga0209109_10134399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1255	Open in IMG/M
3300025318\|Ga0209519_10117152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1570	Open in IMG/M
3300025318\|Ga0209519_10594858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300025324\|Ga0209640_10353808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1219	Open in IMG/M
3300025324\|Ga0209640_10765313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300025325\|Ga0209341_10758339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300025325\|Ga0209341_11041214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300025326\|Ga0209342_11041110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300025549\|Ga0210094_1041920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	792	Open in IMG/M
3300025893\|Ga0207682_10408655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300025904\|Ga0207647_10610429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300025908\|Ga0207643_10039081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2669	Open in IMG/M
3300025926\|Ga0207659_10339731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1243	Open in IMG/M
3300025931\|Ga0207644_10044606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3151	Open in IMG/M
3300025936\|Ga0207670_10750888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300025937\|Ga0207669_10450019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300025937\|Ga0207669_10509473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	964	Open in IMG/M
3300025940\|Ga0207691_11399952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300025942\|Ga0207689_10619108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300025944\|Ga0207661_10101482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2417	Open in IMG/M
3300026023\|Ga0207677_11802245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300026062\|Ga0208654_1005454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1636	Open in IMG/M
3300026372\|Ga0256804_1040962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300026933\|Ga0207578_1003350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300027511\|Ga0209843_1073785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300027561\|Ga0209887_1023104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1479	Open in IMG/M
(restricted) 3300027799\|Ga0233416_10315948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10413945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300028587\|Ga0247828_10973693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300028589\|Ga0247818_10917610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300028596\|Ga0247821_10843880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300028608\|Ga0247819_10958103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300028744\|Ga0307318_10068903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1181	Open in IMG/M
3300028803\|Ga0307281_10373791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300028819\|Ga0307296_10194465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1100	Open in IMG/M
3300028889\|Ga0247827_10286393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	955	Open in IMG/M
3300029804\|Ga0247696_107393	Not Available	688	Open in IMG/M
3300031199\|Ga0307495_10085979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
(restricted) 3300031237\|Ga0255334_1029447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300031562\|Ga0310886_10570715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300031562\|Ga0310886_11131240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300031576\|Ga0247727_10134619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2445	Open in IMG/M
3300031746\|Ga0315293_10438949	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300031772\|Ga0315288_10342342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1541	Open in IMG/M
3300031847\|Ga0310907_10594620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300031862\|Ga0315280_10506145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300031908\|Ga0310900_10453981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300031943\|Ga0310885_10871135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300031997\|Ga0315278_10382243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1454	Open in IMG/M
3300032003\|Ga0310897_10103388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1136	Open in IMG/M
3300032122\|Ga0310895_10390050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300032342\|Ga0315286_10337313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1592	Open in IMG/M
3300032397\|Ga0315287_11563279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300032401\|Ga0315275_11745471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300032516\|Ga0315273_10262955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2348	Open in IMG/M
3300033550\|Ga0247829_10616220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300034165\|Ga0364942_0088987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300034354\|Ga0364943_0271114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.98%
Host-Associated	Host-Associated	25.20%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.91%
Plants	Host-Associated → Plants	25.20%
Aquatic	Environmental → Aquatic	17.07%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.45%
Freshwater	Environmental → Aquatic → Freshwater	10.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.13%
Marine	Environmental → Aquatic → Marine	3.25%
Sediment	Environmental → Aquatic → Sediment	3.25%
Floodplain	Environmental → Terrestrial → Floodplain	1.63%
Roots	Host-Associated → Plants → Roots	1.63%
Cave	Environmental → Terrestrial → Cave	0.81%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.15%
Loam	Environmental → Terrestrial → Soil → Loam	14.63%
Lake	Environmental → Aquatic → Freshwater → Lake	8.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.32%
Sand	Environmental → Terrestrial → Soil → Sand	4.06%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.32%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	6.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.69%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	8.13%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.06%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.25%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.63%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.81%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.81%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026062	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026372	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F5	Environmental	Open in IMG/M
3300026933	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027799 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MG	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300029804	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-4-W_N	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031237 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_35cm_T3_129	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_04154450	2170459021	Switchgrass, Maize And Mischanthus Litter	VPGKPLAAKARLQILVGTLVVGCWKQTAIVQCSGANAGTWIPFKGKRTGVITWPAQSAGVKLTFQATVVAAGKSLKLRAPVTVHLP
C687J26616_100505752	3300002120	Soil	VRSAAGKPLPAKMRLQILFAGTVVGCWKNGAMTQCTGPNAGTWIVFKGKRSGVLTWPAQSLGIRLTFQAVVVAVKQTRRLRAPVTVQPAPAPAPTP*
C687J26631_100146532	3300002124	Soil	VHAVVGXEPWRYTVRVKDAAGKPLAAKMRLQILFGTVVVGCWKGTAMTQCTGANAGTWIAFKGKRTGVIVWPAQSLGIKLTFQAVVMAERRTLRLRAPVTVQPRP*
C687J29651_102159182	3300002407	Soil	AAGKPLPXKMRLQILFAGTVVGCWKNGAMTQCSGANAGTWIVFKGKRSGVLTWPAQSLGVRLTFQAVVVAEKQTRRLRAPVTVQPAPTPTP*
Ga0055439_100689032	3300004019	Natural And Restored Wetlands	LQILFGTLVVGCWKRTAIAQCTGTSPGTWIAFKGKRTGTLTWPEASIGQKLTFRAIVVASGRTVKLRSPVTVQPKA*
Ga0055498_100192122	3300004058	Natural And Restored Wetlands	KDAAGKPAAAKMRLQILFGPTVVGCWKGTAMMQCSGANAGTWIAFKGKRSGVLTWPAQSVGIKLTFQAVVVAEMRTLRLRSPVTVQAAP*
Ga0055498_101042942	3300004058	Natural And Restored Wetlands	RLQILVGTTVVGCWKVTAMTQCTGSNAGTWIAFRGKKTGVLTWPKESAGIKLIFQAVVLADSHVLRLRAPVTVQPAP*
Ga0062589_1002668001	3300004156	Soil	AKVRLQLLRGPRVVGCWKTTAMVRCSGARAGTWISFRGKRSGVIAWPARLAGVRLAFRATVVAGTQALTLRAPVTVRLP*
Ga0063356_1051820522	3300004463	Arabidopsis Thaliana Rhizosphere	AGTPWRYTIVVKDRAGKPLLAKVRLQLLRGPRVVGCWKKTAMVRCSGARAGTWISFRGKRSGVIAWPARLAGVRLAFRATVVAGTQALTLRAPVTVRLP*
Ga0062382_101439402	3300004782	Wetland Sediment	GCWKGTTMTQCTGANAGTWIVFRGKKTGTLTWPAQSVGAKLTFQAVVSAAAKTLKLRVPVTVQAKA*
Ga0062594_1018536971	3300005093	Soil	TSSTQPLAGTPWRYTIVVKDRAGKPLPAKVRLQLLRGPRVVGCWKTTAMVRCSGARAGTWISFRGKRSGVIAWPARLAGVRLAFRATVVAGTQALTLRAPVTVRLP*
Ga0070676_100448321	3300005328	Miscanthus Rhizosphere	TPLADTPWRYTIVVKDRAGTPLAAKARLQVLLGTLVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP*
Ga0066388_1085926702	3300005332	Tropical Forest Soil	PLADSPWRYTILVKDQQGRPIRAKARLQILLGTLVVGCWKSTAIVQCSGATSGTWIPFRGKRTGVIKWPAQSAGAKLTFQATVVAAGRSLKLRAPVRVHLP*
Ga0068869_1009103772	3300005334	Miscanthus Rhizosphere	LVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP*
Ga0070689_1007853372	3300005340	Switchgrass Rhizosphere	LVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVRVKLP*
Ga0070691_108238012	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MSTTSTMPLVDTPWRYTIVVRDQAGKPLAAKARLQILLGTLVVGCWKGTAIEQCSGARSGTWISFRGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP*
Ga0070691_110961901	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PLPAKARLHILVGTRVVECWNGTAMTRCSQAESGTWIGFKGKRTGTLSWPARSAGSKRTFVATVVAGGRSLKLRAPLSVKLP*
Ga0070700_1002934332	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPVADTPWRYTIVVEDRGGKPLPAKARLHILVGTRVVECWNGTAMTRCSQAESGTWIGFKGKRTGTLSWPARSAGSKRTFVATVVAGGRSLKLRAPVSVKLP*
Ga0070700_1012564051	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	KPLAAKARLQILLGTLVVGCWKGAAIEQCSGARSGTWISFRGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP*
Ga0070663_1010099562	3300005455	Corn Rhizosphere	MATTSTTPLADTPWRYTIVVKDRAGKPLAAKARLQILLGTLVVGCWKRTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVRVKLP*
Ga0068859_1013600931	3300005617	Switchgrass Rhizosphere	TTPLADTPWRYTIVVKDRAGKPLAAKARLQILLGTLVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP*
Ga0066903_1045638262	3300005764	Tropical Forest Soil	VKDPRGKPLAARTKLQILVGTLVVGCWRETEIVQCTGADAGTWIPFKGKRTGVITWPARSAGVKLTFQATVVAAGRSLKLRAPVTVHVP*
Ga0066903_1062612871	3300005764	Tropical Forest Soil	STTKPVVGVPWRYTITAKDASGRPVAAKARLQILIGAIVVGCWKGDAMAPCTGAKSGTWIPFRGRRIGTIVWPQQSVGVKLTFLATVVSGTQFVKLRAPVTVQATP*
Ga0068858_1017865801	3300005842	Switchgrass Rhizosphere	YTIVVEDRGGKPLPAKARLHILVGTRVVECWNGTAMTRCSQAESGTWIGFKGKRTGTLSWPARSAGSKRTFVATVVAGGRSLKLRAPLSVKLP*
Ga0068862_1003839701	3300005844	Switchgrass Rhizosphere	PLADTPWRYTIVVKDRAGKPLAAKARLQILLGALVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP*
Ga0097621_1005247122	3300006237	Miscanthus Rhizosphere	ILVGTRVVECWNGTAMTRCSQAESGTWIGFKGKRTGTLSWPARSAGSKRTFVATVVAGGRSLKLRAPVSVKLL*
Ga0097621_1017212311	3300006237	Miscanthus Rhizosphere	TMSTSSTKPFADTPWRYTIVVKDQDGKSLAAKVRLQLLRGARVVRCWKSTAMVRCSGARAGTWISFKGKRTGIIAWPARLAGSRLTFRATVVAATQALTLRAPVTVRLP*
Ga0075421_1008621511	3300006845	Populus Rhizosphere	KARLQILLGTLVVGCWKDTAMTQCSGAAAGTWIAFKGKRTGVLTWPAQSAGIKLTFQATVVAAGRSLKLRAPVTVKLP*
Ga0075425_1000472648	3300006854	Populus Rhizosphere	AAKARLQILVGTLVVGCWKQAAIVQCSGATAGTWIPFKGKRTGVITWPAQSAGVKLTFQATVVAAGRSLKLRAPVTVHLP*
Ga0075429_1009121452	3300006880	Populus Rhizosphere	LQILLGTLVVGCWKGTAMTQCSGANAGTWIPFKGKRTGVLTWPAPSAGIKLTFQATVVAAGRSLKLRAPVTVKLP*
Ga0105245_122560842	3300009098	Miscanthus Rhizosphere	PWRYTIVVNDRAGKPLAAKARLQILVGTLVVGCWKQAAIVQCSGATAGTWIPFKGKRTGVITWPAQSAGVKLTFQATVVAAGSSLKLRAPVTVHLP*
Ga0114129_116045821	3300009147	Populus Rhizosphere	TIVVKDRSGKPLRAKVRLQILLGTLVVGCWKGTAMTQCSGANAGTWIAFNAKRTGVLTWPAQSAGIKLTFQATVVAAGRSLKLRAPVTVKLP*
Ga0114129_125566431	3300009147	Populus Rhizosphere	IVVRDQAGKPLAAKARLQILLGTLVVGCWKGTAIEQCSGARSGTWISFRGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP*
Ga0105242_127045252	3300009176	Miscanthus Rhizosphere	AAKARLQILLGTLVVGCWKETAMVQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP*
Ga0105081_10824491	3300009806	Groundwater Sand	DAGKPLAARMRLQILLGPTVVGCWKGGQMAQCLDGSQGSWIPFKGKRTGVLTWPAQSVGVKLTFRAIVVAAKRTFKLRAPVTVQPKS*
Ga0105062_10131521	3300009817	Groundwater Sand	PVVDQPWRYTITVKTAAGKPLAARMRLQILLGTTVVGCWKGGQMAQCLDGSLGSWIPFKGKRTGVLTWPAQSVGVQLTFRAIVVAQKRMFKLRAPVTVQAKP*
Ga0134128_112496331	3300010373	Terrestrial Soil	ARLQILLGTLVVGCWKRTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP*
Ga0105246_100230482	3300011119	Miscanthus Rhizosphere	MSTTSTTPLVDTPWRYAIVVKDRSGRPLQAKARLQILLGTLVVGCWKGTAMTQCSGATAGTWIPFKGKRTGVLTWPAQSAGIKLTFQATVVAAGRSLKLRAPVTVKLP*
Ga0157284_100189321	3300012893	Soil	TTSTTPLADTPWRYTIVVKDRAGKPLAAKARLQILLGTLVVGCWKGTAIEQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRPLRLRAPVTVKLP*
Ga0157309_101448952	3300012895	Soil	WRYTIVVKDRAGTPLAAKARLQILLGRLVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP*
Ga0157285_101446322	3300012897	Soil	LADTPWRYTIVVNDRAGKPLAARARLQILLGTLVVGCWKETAMVQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAERVLKLRAPVTVKLP*
Ga0157292_102911911	3300012900	Soil	LLGTLVVGCWKGAAIEQCSGARSGTWISFRGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP*
Ga0157291_100777232	3300012902	Soil	VRDQAGRPLAARARLQILLGALVVGCWKGTAIEQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP*
Ga0126369_131007041	3300012971	Tropical Forest Soil	RMRLQILLGETVVGCWKGKAMVQCVGAASGTWIPFKGRKTGILTWPAQSVGVTLTFQAVVQTGGRTRRLPAPVTVQPATAPPPTTTTTP*
Ga0075352_11404551	3300014324	Natural And Restored Wetlands	TPVVDQQWRWTVVVKDAKGTPLAAKLKLQILLGTLVVGCWKGTAVTQCTGANAGTWIAFKGKRTGMLTWPAQSLGVKLTFQAVVVAGGKTLKLRAPVTVQAKA*
Ga0157380_112219171	3300014326	Switchgrass Rhizosphere	SSTAPFVDMPWRYTIVVKDRAGKPLAAKARLQILLGTLVVGCWKGTAMVHCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVRVKLP*
Ga0173480_100870613	3300015200	Soil	PWRYTIVVKDRAGTPLAAKARLQILLGRLVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVRVKLP*
Ga0180093_11033122	3300015258	Soil	PVVDQPWHFTVTVKNAAGKPAAAKMRLQILLGPTVVGCWKGTAMTQCSGANAGTWISFKGNRSDVLTWPAQSVGIKLTFQAVVVADRRTLRLRSPVTVQAAP*
Ga0132256_1007503472	3300015372	Arabidopsis Rhizosphere	MPWRYTIVVKDRAGKPLTAKARLQILLGALVVGCWKGTAMVQWSGARSGTWIPFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP*
Ga0132256_1032211991	3300015372	Arabidopsis Rhizosphere	GALVVGCWKQTAIVPCSGATAGTWIPFRGKRTGVITWPAQSAGAKLAFQATVVAAGTSLKLRAPVTVRLP*
Ga0132257_1012029201	3300015373	Arabidopsis Rhizosphere	ARLQVLSGTLVVGCWKQTAIVQCSGATAGTWIPFRGKRTGVITWPAQSAGAKLAFQATVVAAGTSLKLRAPVTVRLP*
Ga0190266_103824541	3300017965	Soil	PLAAKVRLQILLGTFVVGCWKRTAIVPCSGATSGTWISFKGKRTGVIRWPAQSAGAKLMFQATVVAMSRALKLRAPVRVQLP
Ga0184637_101210051	3300018063	Groundwater Sediment	GASVTVKNAAGKPAVAKMRLQILLGSTVVGCWKGTAMTQCSGANAGTWIAFKGKRSDVITWPVQSVGIKLTFQAVVVAETRTLRLRSPVTVQPVP
Ga0184611_10883741	3300018067	Groundwater Sediment	SSTTALVDAPWRYTITVKDQAGKPVAAKVRLQILLRTLVVGCWKAAGLVRCSGAKAGTWIAFRGKRTAAITWPARYSGMKLTFQAIVVSGTRALRLRAPVTVRSSS
Ga0184625_103115732	3300018081	Groundwater Sediment	GTPWRYTITVEDQAGKPVGAKVRLQILLGTLVVGCWKATGLVRCSGPRAGTWIAFRGKRTAAITWPARYSGMKLTFQAMVVAGTRTLRLRAPVTVRMA
Ga0190270_128848361	3300018469	Soil	LIGTLVVGCWKRTAIVPCSGPTSGTWISFRGKRTGLITWPVQSAGVKLTFQATIVAAARSLKLRAPVRVQLP
Ga0173481_103852311	3300019356	Soil	VVKDPAGKPLAAKARLQIFLGTLVVGCWNGTAMVQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP
Ga0173481_106143701	3300019356	Soil	TTPLADTPWRYTIVVKDRAGTPLAAKARLQILLGRLVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVRVKLP
Ga0173479_105120592	3300019362	Soil	KPLAAKARLQILLGTLVVGCWKGTAIEQCSGARSGTWISFRGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP
Ga0193741_10555231	3300019884	Soil	LLAGRMRLQVLDGTTVVGCWKRGGIRACSGANAGTWISFKGRRTGVIAWQARYATLRLTFQAIVVAGTPPLLLRAPVTVQLPAKP
Ga0194121_101913632	3300020200	Freshwater Lake	LVDTPWRYTIIVKDQSGKPIAAKARLQILLGTTVVGCWKGTAMAPCTGANAGTWISFKGRRTGIIAFPPESAGVKLTFQATVVAGTRSLRLRAPVAPKLP
Ga0247788_10836392	3300022901	Soil	PLAGTPWRYTIVVKDRAGKPLPAKVRLQLLRGPRVVGCWKTTAMVRCSGARAGTWISFRGKRSGVIVWPARLAGVRLAFRATVIAGTQALTLRAPVTVRLP
Ga0209320_100194734	3300025155	Soil	AKMRLQILFAGTVVGCWKNGAMTQCTGPNAGTWIVFKGKRSGVLTWPAQSLGIRLTFQAVVVAVKQTRRLRAPVTVQPAPAPAPTP
Ga0209320_102978142	3300025155	Soil	AAGKPLPAKMRLQILFAGTVVGCWKNGAMTQCSGANAGAWIVFKGKRSGVLTWPAQSLGIRLTFQAVVVAEKQTRRLRAPVTVQPAPTP
Ga0209619_102946372	3300025159	Soil	VTVKNAAGKPVVAKMRLQILLGTTVVGCWKVTAMMQCSGANAGTWIAFKGKRSDVLTWPAQSVGIELTFQAVVVAAKRTVRLRSPVTVQPAR
Ga0209109_101343991	3300025160	Soil	LFAGTVVGCWKNGAMTQCTGANAGTWIVFKGKRSGVLTWPAQSLGIRLTFQVVVVAEKQTRRLRAPVTVQPTPAPAPAPTP
Ga0209519_101171521	3300025318	Soil	PLPVKMRLQILFAGTVVGCWKNGAMTQCTGPNAGTWIVFKGKRSGVLTWPAQSLGIRLTFQAVVVAVKQTRRLRAPVTVQPAPAPAPTP
Ga0209519_105948581	3300025318	Soil	NQAGKPLAAKVRLQILFGTLVVGCWKGTAMTQCAGANAGTWISFRGKRTGTITWPAQSAGIKLTFQAVVVAGGRSLRLRAPVTVQLP
Ga0209640_103538082	3300025324	Soil	KMRLQILFAGTVVGCWKNGAMTQCTGPNAGAWIVFKGKRSGVLTWPAQSLGIRIMFQAVVVAEKQTRRLRAPVTVQPTPAPAPAPTP
Ga0209640_107653132	3300025324	Soil	GTVVGCWKNGAMTQCTGPNAGTWIVFKGKRSGVLTWPAQSLGIRLTFQVVVVAEKQTRRLRAPVTVQPAPAPAPAPTP
Ga0209341_107583392	3300025325	Soil	AKMRLQILFAGTVVGCWKNGAMTQCSGANAGAWIVFKGKRSGVLTWPAQSLGIRLTFQAVVVAEKQTRRLRAPVTVQPAPAPAPAPTP
Ga0209341_110412142	3300025325	Soil	VTVKNAAGKPLPAKMRLQILLGTTVVGCWKGTAMMQCSGANAGTWIVFKGKRTGVLTWPAQSLGIKLTFQAIVVADRRTLRLRAPVTVQPKA
Ga0209342_110411102	3300025326	Soil	MTTSSAKPVVDQPWRWTVTVKNSAGKLVAAKMRLQILLGPTVVGCWKGTAMTPCSGPNAGTWIAFKGKRSGIITWPAQSAGIKLTFQAVVVAESRTLRLRAPV
Ga0210094_10419201	3300025549	Natural And Restored Wetlands	ILIGTAVVGCWKGTEMMPCTGANSGTWIVFRGVRTGVITWPAQSVGAKLTFQAVVSAGRKTTRLRAPVTVQQKT
Ga0207682_104086551	3300025893	Miscanthus Rhizosphere	TMTTTSTMPVADTPWRYTIVVEDRGGKPLPAKARLHILVGTRVVECWNGTAMTRCSQAESGTWIGFKGKRTGTLSWPARSAGSKRTFVATVVAGGRSLKLRAPVSVKLP
Ga0207647_106104291	3300025904	Corn Rhizosphere	TPWRYTIVVRDQAGKPLAAKARLQILLGTLVVGCWKGTAIEQCSGARSGTWISFRGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP
Ga0207643_100390813	3300025908	Miscanthus Rhizosphere	MPVADTPWRYTIVVEDRGGKPLPAKARLHILVGTRVVECWNGTAMTRCSQAESGTWIGFKGKRTGTLSWPARSAGSKRTFVATVVAGGRSLKLRAPVSVKLP
Ga0207659_103397312	3300025926	Miscanthus Rhizosphere	STTPLADTPWRYTIVVKDRAGKPLAAKARLQILLGTLVVGCWKRTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP
Ga0207644_100446064	3300025931	Switchgrass Rhizosphere	WRYTIVVKDRAGKPLAAKARLQILLGTLVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP
Ga0207670_107508882	3300025936	Switchgrass Rhizosphere	ILLGALVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP
Ga0207669_104500192	3300025937	Miscanthus Rhizosphere	MPWRYTIVVKDRAGKPLAAKARLQILLGTLVVGCWKGTAMVHCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVRVKLP
Ga0207669_105094732	3300025937	Miscanthus Rhizosphere	MPVADTPWRYTIVVEDRGGKPLPAKARLHILVGTRVVECWNGTAMTRCSQAESGTWIGFKGKRTGTLSWPARSAGSKRAFVATVVAGGRSL
Ga0207691_113999521	3300025940	Miscanthus Rhizosphere	VRLQLLRGARVVRCWKSTAMVRCSGARAGTWISFKGKRTGIIAWPARLAGSRLTFRATVVAATQALTLRAPVTVRLP
Ga0207689_106191082	3300025942	Miscanthus Rhizosphere	ATTSTTPLADTPWRYTIVVKDRAGKPLAAKARLQILLGTLVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP
Ga0207661_101014821	3300025944	Corn Rhizosphere	RAGKPLAAKARLQILLGALVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP
Ga0207677_118022452	3300026023	Miscanthus Rhizosphere	GRLVVGCWKGTAIEQCSGASSGTWIAFKGKRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP
Ga0208654_10054541	3300026062	Natural And Restored Wetlands	TPWRYTVVVKNRAGRPLAAKMRLQILLGTTVVGCWKGTAMTACSGANAGTWISFKGRRTGVLTWPAQSAGVTLTFQAIVVAGTRSLRLRAPVTVQLP
Ga0256804_10409622	3300026372	Sediment	TSSPTPTVDDPWRWTVAVKDAKGKPLVGKVRLQILLGTLVVGCWKGTAMTQCSGATSGTWIAFKGLRTGVLTWPAQSVGVKLTFQAVVAAGGTILRLRAPVTVQPKT
Ga0207578_10033501	3300026933	Soil	PWRYAIVVKDRSGRPLQAKARLQILLGTLVVGCWKGTAMTQCSGATAGTWIPFKGKRTGVLTWPAQSAGIKLTFQATVVAAGRSLKLRAPVTVKLP
Ga0209843_10737852	3300027511	Groundwater Sand	ITVKSAAGKPLAARMRLQILLGTTVVGCWKGGQMAQCLDGSQGSWIPFKGKRTGVLTWPAQSVGVQLTFRAIVVVQKRTFKLRAPVTVQAKP
Ga0209887_10231041	3300027561	Groundwater Sand	VVDQPWRYTITVKTAAGKPLAARMRLQILLGTTVVGCWKGGQMAQCLDGSLGSWIPFKGKRTGVLTWPAQSVGVKLTFRAIVVAQKRTFKLRAPVTVQAKP
(restricted) Ga0233416_103159481	3300027799	Sediment	KPLAARMRLQILVGGTVVGCWKGGEMAQCLDGSLGSWIVFKGKRTGVLTWPAQSVGVKLTFRAIVVAQKRTLRLRAPVVVQPKS
(restricted) Ga0233417_104139452	3300028043	Sediment	VVVKDAKGKPLPARMKLQILFGDIVVGCWKGTEMTQCTGANPGTWIVFKGKKTGTLTWPLQSVGTKLAFQAVVTAGGKTIKLRKPVTVQPKS
Ga0247828_109736931	3300028587	Soil	AGKPLAAKARLQILLGTLVVGCWKRTAMVQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP
Ga0247818_109176102	3300028589	Soil	PLAAKARLQILLGTLVVGCWKETAMVQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP
Ga0247821_108438802	3300028596	Soil	LAGTPWRYTIVVKDRAGKPLPAKVRLQLLRGPRVVGCWKTTAMVRCSGARAGTWISFRGKRSGVIAWPARLAGVRLAFRATVVAGTQALTLRAPVTVRLP
Ga0247819_109581031	3300028608	Soil	KPLTAKARLQILLGTLVVGCWKGAAMVQCSGARSGTWIPFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP
Ga0307318_100689032	3300028744	Soil	TTALVDAPWRYTITVKDQAGKPVAAKVRLQILLRTLVVGCWKAAGLVRCSGAKAGTWIAFRGKRTAAITWPARYSGMKLTFQAIVVSGTRALRLRAPVTVRSSS
Ga0307281_103737911	3300028803	Soil	ILLGTLVVGCWKGSAMAPCSGANAGTWISFKGKRTGTIIWPAQSAGVKLTFQATVVAGTRSLKLRAPVTVQLP
Ga0307296_101944652	3300028819	Soil	VDTPWRYTITVKDQAGKPVAAKVRLQILLGTLVVGCWKSTAMVQCSGARAGTWITFKGKRTATIAWPAQSAGIKLTFQATVVAGTRTLRLRAPIRVRLA
Ga0247827_102863931	3300028889	Soil	QPLAGTPWRYTIVVKDRAGKPLLAKVRLQLLRGPRVVGCWKKTAMVRCSGARAGTWISFRGKRSGVIAWPARLAGVRLAFRATVVAGTQALTLRAPVTVRLP
Ga0247696_1073932	3300029804	Soil	RLQILLGNAVVGCWKGTAMAACEGTGSGTWISFKGRRSGTLTWPAQSVGVTLTFQALVVTSGRSLRLRVPVRVQAP
Ga0307495_100859791	3300031199	Soil	AAKARLQILVGTLVVGCWKQTAIVQCSGANAGTWISFKGRRTGVITWPAQSAGVKLTFQATVVAAGRSLKLRAPVTVHLP
(restricted) Ga0255334_10294471	3300031237	Sandy Soil	ILLGTTVVGCWRGSAMTACSGTNAGTWIAFKGKRTGTLTWPAQSAGIKLTFQATVVAGTRSLKLRAPVTVQRP
Ga0310886_105707151	3300031562	Soil	VKDRAGKPLAAKARLQILLGTLVVGCWKRTAMVQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP
Ga0310886_111312402	3300031562	Soil	TPLANTPWRYTIVVKDRAGKPLAAKARLQILVGTLVVGCWKGTAIEQCSGASSGTWIAFKGRRIGVLTWPAQSAGVKLTFQATVVAAGRALRLRAPVTVKLP
Ga0247727_101346191	3300031576	Biofilm	AKMRLQILVGTTVVGCWKNGTMAQCLDGSLGQWISFKGKRSGVLTWPAQSLGVKLTFQAVVKADRQTRKLRAPVTVQPAP
Ga0315293_104389492	3300031746	Sediment	MVTSSPAPVVDQPWRYTVTVRSRAGKPLPAKMRLQILFGSLVVGCWKGTAMAQCSGANAGTWIVFKGKRTGVITWPAQSLGIRLTFQAVVVAETKTLKLRAPVTVQSA
Ga0315288_103423423	3300031772	Sediment	GKPLPAKMRLQILFGSLVVGCWKGTAMAQCSGANAGTWIVFKGKRTGVITWPAQSLGIRLTFQAVVVAETKTLKLRAPVTVQSA
Ga0310907_105946202	3300031847	Soil	STSSTQPLAGTPWRYTIVVKDRAGKPLPAKVRLQLLRGPRVVGCWKTTAMVRCSGARTGTWISFRGKRSGVIAWPARLAGVRLAFRATVVAGTQALTLRAPLTVRLP
Ga0315280_105061451	3300031862	Sediment	APVVDQPWRYTVTVRSRAGKPLPAKMRLQILFGSLVVGCWKGTAMAQCSGANAGTWIVFKGKRTGVITWPAQSLGIRLTFQAVVVAETKTLKLRAPVTVQSA
Ga0310900_104539811	3300031908	Soil	KPLAAKARLQILLGTLVVGCWKRTAMVQCSGARSGTWISFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP
Ga0310885_108711351	3300031943	Soil	RLQILLGTLVVGCWKRTAMVQCSGARSGTWISFKGKRTGVLRWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP
Ga0315278_103822431	3300031997	Sediment	MVTSSPAPVVDQPWRYTVTVKSRTGKPLPAKMRLQILFGPLVVGCWKGTAMAQCSGANAGTWIVFKGKRTGVLTWPAQSLGIRLTFQAVVVAETKTLKLRAPVTVLSA
Ga0310897_101033882	3300032003	Soil	MSTSSTTPLADTPWRYTIVVKDRAGKPLTAKARLQILLGTLVVGCWKGTAMVQCSGARSGTWISFRGKRAGVLTWPAQSAGVKLTFQATVVAAGRALKLRAPVTVKLP
Ga0310895_103900502	3300032122	Soil	LQILLGTLVVGCWKGTAMVQCSGARSGTWIPFKGKRTGVLTWPAQSAGVKLTFQATVVAAGRALKLRTPVTVKLP
Ga0315286_103373133	3300032342	Sediment	MVTSSPAPVVDQPWRYTVTVKSRAGKPLPAKMRLQILFGSLVVGCWKGTAMAQCSGANAGTWIVFKGKRTGVITWPAQSLGIRLTFQAVVVAETKTLKLRAPVTVQSA
Ga0315287_115632792	3300032397	Sediment	MVTSSPAPAVDQPWRYTVTVKSRAGKPLPAKMRLQILFGSLVVGCWKGTAMAQCSGANAGTWIVFKGKRTGVLTWPAQSLGIRLTFQAVVVAETKTLKLRAPVTVQSA
Ga0315275_117454711	3300032401	Sediment	MRLQILFGSLVVGCWKGTAMAQCSGANAGTWIVFKGKRTGVLTWPAQSLGIRLTFQAVVVAETKTLKLRAPVTVLSA
Ga0315273_102629553	3300032516	Sediment	MVTSSPAPVVDQPWRYTVTVKSRAGKPLPAKMRLQILFGSLVVGCWKGMAMAQCSGANAGTWIVFKGKRTGVLTWPAQSLGIRLTFQAVVVAETKTLKLRAPVTVQPT
Ga0247829_106162201	3300033550	Soil	HASMSTTSTTPLVDTPWRYTIVVRDQAGKPLAAKARLQILLGTLVVGCWKGTAIEQCSGARSGTWISFRGKRTGVLTWPAKSAGVKLTFQATVVAAGRAQLQRAPVTVKLP
Ga0364942_0088987_17_346	3300034165	Sediment	MTASSARPVVDQPWRWTVTVKNDSGKPVTAKMRLQILLGSTVVGCWKGTAMTQCSGANAGTWIAFRGRRSGVITWPAQSVGIKLTFQAVVVAERKTLRLRAPVTVRLTP
Ga0364943_0271114_1_300	3300034354	Sediment	DQPWRFTVTVKNAAGKPAVAKMRLQILLGSTVVGCWKGTAMTQCSGANAGTWIAFKGKRSDVITWPVQSVGIKLTFQAVVVAETRTLRVRSPVTVQPAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters