Metagenome / Metatranscriptome Family F069779

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069779
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	108 residues
Representative Sequence	MCRALKVLCVAEDAESLAALKRAAVSAEWELAPGATDEAEALAQLHAERPHVVVVFGPFEGFVRAAREAYPFLRIVADRDLPGATVVATSLEEVRGAVKGLPRPGGPVR
Number of Associated Samples	91
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.80 %
% of genes near scaffold ends (potentially truncated)	26.02 %
% of genes from short scaffolds (< 2000 bps)	67.48 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.561 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.634 % of family members)
Environment Ontology (ENVO)	Unclassified (21.951 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (30.894 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.93% β-sheet: 16.06% Coil/Unstructured: 54.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
c.23.1.0: CheY-like	d3cz5a_	3cz5	0.86
c.23.1.0: CheY-like	d3cz5a_	3cz5	0.86
c.23.1.0: CheY-like	d3a0ua_	3a0u	0.85
c.23.1.0: CheY-like	d3t8ya_	3t8y	0.85
c.23.1.0: CheY-like	d6ekgy_	6ekg	0.85
c.23.1.0: CheY-like	d3a0ua_	3a0u	0.85
c.23.1.0: CheY-like	d3t8ya_	3t8y	0.85
c.23.1.0: CheY-like	d6ekgy_	6ekg	0.85
c.23.1.1: CheY-like	d1w25a1	1w25	0.84
c.23.1.1: CheY-like	d1w25a1	1w25	0.84

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01544	CorA	55.28
PF02401	LYTB	12.20
PF00583	Acetyltransf_1	3.25
PF06737	Transglycosylas	3.25
PF00486	Trans_reg_C	1.63
PF01464	SLT	1.63
PF08245	Mur_ligase_M	1.63
PF02080	TrkA_C	0.81
PF01769	MgtE	0.81
PF01037	AsnC_trans_reg	0.81
PF00300	His_Phos_1	0.81
PF01384	PHO4	0.81
PF02371	Transposase_20	0.81
PF07221	GlcNAc_2-epim	0.81
PF00563	EAL	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	55.28
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	24.39
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.81
COG1824	Permease, similar to cation transporters	Inorganic ion transport and metabolism [P]	0.81
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.81
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.81
COG2942	Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family	Carbohydrate transport and metabolism [G]	0.81
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.81
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.81

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.56 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.06 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.06 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	50.41 %
Unclassified	root	N/A	2.44 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	44.72 %
Unclassified	root	N/A	2.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	44.72 %
Unclassified	root	N/A	2.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002120\|C687J26616_10002202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8152	Open in IMG/M
3300002120\|C687J26616_10047077	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300002243\|C687J29039_10000330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18782	Open in IMG/M
3300002503\|C687J35164_10029743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1793	Open in IMG/M
3300002568\|C688J35102_120732236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1441	Open in IMG/M
3300003267\|soilL1_10037487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1825	Open in IMG/M
3300003267\|soilL1_10102605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1311	Open in IMG/M
3300003319\|soilL2_10247880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1499	Open in IMG/M
3300003892\|Ga0063012_10098751	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300003994\|Ga0055435_10080881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300003994\|Ga0055435_10212035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300003995\|Ga0055438_10193256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300004019\|Ga0055439_10300458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300004024\|Ga0055436_10032882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1337	Open in IMG/M
3300004779\|Ga0062380_10399856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300005204\|Ga0068997_10059096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300005440\|Ga0070705_100795573	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005445\|Ga0070708_101686920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300005468\|Ga0070707_100063828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3535	Open in IMG/M
3300005529\|Ga0070741_10003198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41328	Open in IMG/M
3300005529\|Ga0070741_10163990	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300005536\|Ga0070697_100215210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1637	Open in IMG/M
3300006865\|Ga0073934_10031208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5119	Open in IMG/M
3300006865\|Ga0073934_10032906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4927	Open in IMG/M
3300006865\|Ga0073934_10035122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4699	Open in IMG/M
3300006876\|Ga0079217_10917192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300006918\|Ga0079216_11083272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300007070\|Ga0073929_1014262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1812	Open in IMG/M
3300007790\|Ga0105679_11032856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M
3300009012\|Ga0066710_102161460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300009012\|Ga0066710_103721097	Not Available	573	Open in IMG/M
3300009053\|Ga0105095_10001164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13542	Open in IMG/M
3300009078\|Ga0105106_10008748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7304	Open in IMG/M
3300009137\|Ga0066709_100978723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1237	Open in IMG/M
3300009789\|Ga0126307_10514143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300009793\|Ga0105077_125746	Not Available	522	Open in IMG/M
3300009815\|Ga0105070_1038818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300009822\|Ga0105066_1009589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1775	Open in IMG/M
3300009840\|Ga0126313_11766703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300010038\|Ga0126315_10057535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2129	Open in IMG/M
3300010336\|Ga0134071_10708465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300010938\|Ga0137716_10106961	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300012930\|Ga0137407_11802078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300012931\|Ga0153915_10060426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3915	Open in IMG/M
3300018027\|Ga0184605_10068724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1532	Open in IMG/M
3300018027\|Ga0184605_10148703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1053	Open in IMG/M
3300018031\|Ga0184634_10000059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21571	Open in IMG/M
3300018061\|Ga0184619_10027300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2383	Open in IMG/M
3300018063\|Ga0184637_10023354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3728	Open in IMG/M
3300018063\|Ga0184637_10261214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300018077\|Ga0184633_10034069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2564	Open in IMG/M
3300018082\|Ga0184639_10043113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2321	Open in IMG/M
3300018089\|Ga0187774_10254570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300018422\|Ga0190265_12853257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300018469\|Ga0190270_10893211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300019255\|Ga0184643_1261598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300019377\|Ga0190264_10042340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1763	Open in IMG/M
3300020202\|Ga0196964_10051402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1741	Open in IMG/M
3300021080\|Ga0210382_10057574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1544	Open in IMG/M
3300021184\|Ga0196959_10029860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300022554\|Ga0212093_1001546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63141	Open in IMG/M
3300025146\|Ga0209322_10016293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3793	Open in IMG/M
3300025165\|Ga0209108_10622536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300025167\|Ga0209642_10542364	Not Available	639	Open in IMG/M
3300025174\|Ga0209324_10015243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5241	Open in IMG/M
3300025310\|Ga0209172_10020360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4813	Open in IMG/M
3300025310\|Ga0209172_10022636	All Organisms → cellular organisms → Bacteria	4450	Open in IMG/M
3300025312\|Ga0209321_10071295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1978	Open in IMG/M
3300025313\|Ga0209431_10248727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1399	Open in IMG/M
3300025313\|Ga0209431_10826118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300025318\|Ga0209519_10043961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2515	Open in IMG/M
3300025318\|Ga0209519_10161727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1324	Open in IMG/M
3300025322\|Ga0209641_10079534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2516	Open in IMG/M
3300025324\|Ga0209640_10562343	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300025324\|Ga0209640_10895616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300025325\|Ga0209341_10025496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5047	Open in IMG/M
3300025325\|Ga0209341_10047192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3663	Open in IMG/M
3300025325\|Ga0209341_10409336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300025325\|Ga0209341_10419970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300025326\|Ga0209342_10002356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20317	Open in IMG/M
3300025326\|Ga0209342_10092104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2807	Open in IMG/M
3300025327\|Ga0209751_11334479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300025922\|Ga0207646_10055205	All Organisms → cellular organisms → Bacteria	3552	Open in IMG/M
3300026535\|Ga0256867_10028802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2334	Open in IMG/M
3300027169\|Ga0209897_1021520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300027490\|Ga0209899_1042587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300027647\|Ga0214468_1073725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300027713\|Ga0209286_1013526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2924	Open in IMG/M
3300027792\|Ga0209287_10117080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
(restricted) 3300027799\|Ga0233416_10362006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300027831\|Ga0209797_10204122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300027843\|Ga0209798_10552474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300027964\|Ga0256864_1012536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2118	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10525240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300028784\|Ga0307282_10166244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300028828\|Ga0307312_10012516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4708	Open in IMG/M
3300029977\|Ga0272449_1153532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300030006\|Ga0299907_10166283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1823	Open in IMG/M
3300030006\|Ga0299907_10471341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300030006\|Ga0299907_10625887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300030606\|Ga0299906_10242598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1417	Open in IMG/M
3300030620\|Ga0302046_10102018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2339	Open in IMG/M
3300030620\|Ga0302046_10641253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300031229\|Ga0299913_10041193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4388	Open in IMG/M
3300031229\|Ga0299913_10310234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1564	Open in IMG/M
3300031949\|Ga0214473_10072299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4033	Open in IMG/M
3300031949\|Ga0214473_10321789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1761	Open in IMG/M
3300031949\|Ga0214473_10336267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1716	Open in IMG/M
3300031949\|Ga0214473_10386634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1581	Open in IMG/M
3300031949\|Ga0214473_11373422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300031965\|Ga0326597_10214516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2246	Open in IMG/M
3300031965\|Ga0326597_10224586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2184	Open in IMG/M
3300031965\|Ga0326597_10224756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2183	Open in IMG/M
3300031965\|Ga0326597_10359451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1633	Open in IMG/M
3300031965\|Ga0326597_10458404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300033407\|Ga0214472_10497045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1133	Open in IMG/M
3300033407\|Ga0214472_10515254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300033407\|Ga0214472_11347831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300033416\|Ga0316622_102787213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300033417\|Ga0214471_10473607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1004	Open in IMG/M
3300033433\|Ga0326726_11791954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300033433\|Ga0326726_12465940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300034164\|Ga0364940_0076737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.73%
Aquatic	Environmental → Aquatic	29.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.29%
Freshwater	Environmental → Aquatic → Freshwater	9.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs	8.13%
Sediment	Environmental → Aquatic → Sediment	6.50%
Marine	Environmental → Aquatic → Marine	4.88%
Peat	Environmental → Terrestrial → Peat	1.63%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.46%
Loam	Environmental → Terrestrial → Soil → Loam	18.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.50%
Sand	Environmental → Terrestrial → Soil → Sand	6.50%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	5.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.25%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.44%
Lake	Environmental → Aquatic → Freshwater → Lake	1.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.20%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	13.82%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	9.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.50%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	5.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.44%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.44%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.81%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.81%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.63%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	13.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	9.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.50%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	5.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.25%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.44%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.44%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.44%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.63%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediment	0.81%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.81%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300002503	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003892	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - CP Core 2, 1cm	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007070	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC2 2012 metaG	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009793	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300022554	Dewar_combined assembly	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027799 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MG	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027964	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeq	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029977	Hot spring sediment microbial communities from Yellowstone National Park, WY, United States - YNP-CB-024-1	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26616_1000220210	3300002120	Soil	VCRALRVLCVAEDTQALSALKRATVSTEWELVAGATDEAEALRQLHEDRPQVVVVFGPFGRFVSRALEAYPALRVVADRDLPGASAVVTETEEVRAAVLGRTRPGGPVGPGRPGGSGV*
C687J26616_100470773	3300002120	Soil	MCRALKVLCVAEDADALAALKRAAGAAEWELAPGATSEEEALAQIESERPHVLVVLGSFEGLVARALERRPEMRVVADRELGGATVVVDSIEDVRAAVLGMPRHGGAVR*
C687J29039_100003302	3300002243	Soil	VCRALRVLCVAEDTQALSALKRATASTEWELVAGATDEAEALRQLHEDRPQVVVVFGPFGRFVSRALEAYPALRVVADRDLPGASAVVTETEEVRAAVLGRTRPGGPVGPGRPGGSGV*
C687J35164_100297431	3300002503	Soil	VCRALRVLCVAEDTQALSALKRATVSTEWELVAGATDEAEALRQLHEDRPQVVVVFGPFGRFVSRALEAYPALRVVADRDLPGASAVVTETEEVRAAVL
C688J35102_1207322361	3300002568	Soil	MCRALTVLCVAPDREALVALKRAAVSADWELAPGATDDADAIRQLHEERPHVLVVMGGFEDVVRRALDAYPGLRVVADREIPGASVVVSSLDEVRAAVFGRPRPGPVV*
soilL1_100374873	3300003267	Sugarcane Root And Bulk Soil	MCRALKVLCVAPDRETLAALKRATVSADWELTAGATDEEAAMRQLHEDRPHIAVVVGAFEGFVRRALDAYPSLRVIADRGLEGATVVVSALDEVRDAVLGRSRPGPVV*
soilL1_101026051	3300003267	Sugarcane Root And Bulk Soil	MCRALTVLCVAPDRERLADLKRAAVSAEWELAPGATDDGSALQQLEDEHPHVVVVVGEGLEGFVAEARRRLPFLRIVADRAIPGATVTVSRLDEVRDAVRGLPRPGGPIT*
soilL2_102478803	3300003319	Sugarcane Root And Bulk Soil	VCRALKVLCVAPDPAALLELKRATVSADWELTPGATTEADALTQLHETHPHIAVVFGPFDGFVRRALDAAPALRVVADRPVDGVTTVVGGLDEVRDAVLGRPRPGPVR*
Ga0063012_100987513	3300003892	Hot Spring Sediment	MCRALKVLCVAEDAEGLAALKRAAVSAEWELAPGATDEAEALAQLHAERPHVVVVFGPFEGFVRAAREAYPFLRIVADRDLPGATVVATSLEEVRGAVKGLPRPGGPVR*
Ga0055435_100808812	3300003994	Natural And Restored Wetlands	MCVATDAEALQDLRRATVSTEWELVAGATDEAAALWQLHEERPHVVVVFGPFGGFVARALEAYPALRVVADRDLGVPSVMVAGLDEVRAAVLGRSRPGGPVREARPGGSDG*
Ga0055435_102120351	3300003994	Natural And Restored Wetlands	CCIGSSASATGSDVCRALKVLCIATDADSLRALKRAAVSTEWELVAGATDEAEALRQLHEERPHVVVVFGPFEGFVARALEAYPALRVVTDRDLGDASVVVASRDEVRAAVLGRPRPGGPVQEARPGGSDG*
Ga0055438_101932562	3300003995	Natural And Restored Wetlands	MCVATDAEALQDLRRATVSTEWELVAGATDEAAALWQLHEERPHVVVVFGPFGGFVARALEAYPALRVVADRDLGVPSVMVAGLDEVRAAVLGRSRP
Ga0055439_103004582	3300004019	Natural And Restored Wetlands	KVMCVATDAEALQDLRRATVSTEWELVAGATDEAAALWQLHEERPHVVVVFGPFGGFVARALEAYPALRVVADRDLGVPSVMVAGLDEVRAAVLGRSRPGGPVREARQGGSDG*
Ga0055436_100328822	3300004024	Natural And Restored Wetlands	VCRALKVLCIATDADSLRALKRAAASTEWELVAGATDEAEALRQLHEERPHVVVVFGPFEGFVARALEAYPALRVVTDRDLGDASVVVASRDEVRAAVLGRPRPGGPVQEARPGGSDG*
Ga0062380_103998562	3300004779	Wetland Sediment	VCRALLVLCLAEDRDALAALKRATVSAEWELAPGATSEADALEQLRAERPHIVVVFGDFAGFVAAARGAYPFLRIVTDRDLPGATVVAASLEEVRGAVKGLPRPGGPVR*
Ga0068997_100590962	3300005204	Natural And Restored Wetlands	VCRSLKVLCVAGDPEALEALRRATASAEWEVLPGATDVDEALRLLHEERPHVVVAFGNLDAFVERALEAYPALRVVTDRDVPGASAVAGSLEQVRGLVLGRSRPGGPVG*
Ga0070705_1007955731	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MCRALKVLCVASDAETLADLKRATVSAEWELAPGATSEADALEQLHGERPHLVVVFGDFAHLVAEARAAFPSLGIVADRDLPGATAIATSLDEVRGALKELPRPGGPVL*
Ga0070708_1016869202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MCRALKVLCVAADAEALDALKRATVSAEWELSPGATTEAEALVQLREERPHLVVVFGDFAHLVAEARAAFPSLGIVADRDLPG
Ga0070707_1000638284	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCRALKVLCVAADAEALDALKRATVSAEWELSPGATTEAEALVQLREERPHLVVVFGDFGHFVARARDAFPSLRIVADRDVPGATAVATSLDEVRGALKALPRPGGPVL*
Ga0070741_100031983	3300005529	Surface Soil	MCRALTVLCVAEDAESLLALKRAAVSADWELAPGACSEAEALEQLESEHPHVVVVFGAFGPLVEAIRDRVPYVRIVADRDLPGANAVVASLAEVRAAVTGLPRPGGPVRGG*
Ga0070741_101639902	3300005529	Surface Soil	MCRALKVLCVAEDAESLAALKRATVSADWELAPGACSEAGALEQLESERPHVVVVFGAFGRLVATMRERVPYLRIVTDRDLPGANAVAASPEEVRAAVKGLPRPGGPVRGG*
Ga0070697_1002152103	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MCRALKVLCVASDAETLADLKRATVSAEWELAPGATSEADALEQLHGERPHLVVVFGDFAHLVAEARAAFPSLGIVADRDLPGATAVATSLDEVRGALKELPRPGGPVL*
Ga0073934_100312083	3300006865	Hot Spring Sediment	MCVALKVLCVAEDRSALAALKRAVASAEWELAPGAVNEEEAIGQLHGERPHVVVVFGDFGGFVAAARQAFPALRIVADRDLPGVSVVAGSLEAAREAVLGRLAP*
Ga0073934_100329066	3300006865	Hot Spring Sediment	VCGALVVLCVAGDADALVELKRATVSAAWELAPGATTEEEALRQLGEERPHVLVAFGDFARLVRAARERSPDLRIVTDRDLPGATAVATSLEEVRGAVIGAPRPGGPAR*
Ga0073934_100351222	3300006865	Hot Spring Sediment	MCRALKVLCVAEGKEALAALKRASVGVGWELAPGATREGEALAQVKSERPHVLVVFGSFEGFVTRALELRPGIRVVADRELDGASQVVGSMDEVRAAVLGMPRHGGPVG*
Ga0079217_109171922	3300006876	Agricultural Soil	MCRALKVLCVAEDPDALAALKRAAVSAECELAPGATGPEEAVRQLHEERPHVVVVFGAFEGFVARALEAYPALRVVTDRHMPGAGAVV
Ga0079216_110832722	3300006918	Agricultural Soil	MCRALKVLCVAEDPDALAALKRAAVSAEWELAPGAAGLEEAVRQLHEERPHVVVAFGAFEGFVARALEAYPSLRVVTDRHMPGAGAVVDSLEEVRSAVSGRSRPGPVR*
Ga0073929_10142622	3300007070	Hot Spring Sediment	MCRALKVLCVAEDAEGLAALKRAAVSAEWELAPGATEEAEALAQLHAERPHVVVVFGPFEGFVRAAREAYPFLRIVADRDLPGATVVATSLEEVRGAVKGLPRPGGPVR*
Ga0105679_110328561	3300007790	Soil	MCRALKVLCVAPDRETLAELKRAAVSVEWELTSGASDEDAALRQLHEDRPHIAVVFGSFDAFVRRALDAYPSLRVVADHEIEGAAAVVASVD
Ga0066710_1021614602	3300009012	Grasslands Soil	GTVVPRVQEAGMALAMCRALKVLCVASDPEALAALKRASVSADWELAPGATTEAEALAQLNEERPHIVVAFGDFERFVAEASRTYPVLRIVVDRDLPGATAVATSLEEVRGVLKGLPRPGGPVR
Ga0066710_1037210971	3300009012	Grasslands Soil	MKVLCVAEDPEALASLKRAAVSAEWELMPGAISEGQALAQLEAENPHVLVAFGDFEALVGKARASLPWLRIVTDRDVPGATVVASAEEVRSAVKGLPAPGGPVR
Ga0105095_1000116417	3300009053	Freshwater Sediment	VLCVAEDAESLAALKRATVSADWELAPGATTPEEALAQLETEHPHMLVAFGDLGAFVAAARRAHPTLRIVTDRDLPGATVVATSLDEVRRALHALPRPGGPVL*
Ga0105106_100087487	3300009078	Freshwater Sediment	VCRALKVLCVAEDAESLAALKRATVSADWELAPGATTPEEALAQLETEHPHMLVAFGDLGAFVAAARRAHPTLRIVTDRDLPGATVVATSLDEVRRALHALPRPGGPVL*
Ga0066709_1009787231	3300009137	Grasslands Soil	MALAMCRALKVLCVASDPEALAALKRASVSADWELAPGATTEAEALAQLNEERPHIVVAFGDFERFVAEASRTYPVLRIVVDRDLPGATAVATSLEEVRGVLKGLPRPGGPVR*
Ga0126307_105141432	3300009789	Serpentine Soil	MCRALTVLCVAPDREHLAELKRATVSADWELAPGATDEAGALDQLDSEHPHVVVVVGAFDGFVAEARRRYPFLRIVTDTPSPEATVVADRLEDVRAAVKGLPWPAGPIT*
Ga0105077_1257462	3300009793	Groundwater Sand	VCRALKVLCVAPDGDALAALKRAAVTAEWELSPGATTEQEALAQLKSERPHVLIVFGDFAGLVGKAREASPFMRIVADRDLPGATVVAASMEEVRDAVKGLPRPGGPVR*
Ga0105070_10388182	3300009815	Groundwater Sand	VCRALKVLCVAPDGDALAALKRAAVTAEWELSPGATTEQEALAQLKSERPHVLIVFGDFAGLVGKAREASPFMRIVADRDLPG
Ga0105066_10095894	3300009822	Groundwater Sand	VCRALKVLCVAPDGDALAALKRAAVTAEWELSPGATTEQEALAQLKSERPHVLIVFGDFAGLVGKAREASPFMRI
Ga0126313_117667032	3300009840	Serpentine Soil	MCRALTVLCVAPDREALVALKRAAVSADWELARGATGDADAMRQLHEERPHVLVVVGAFEDLVRRALDAYPGLRVIVDRDIPGANVVVSSLDEVR
Ga0126315_100575352	3300010038	Serpentine Soil	MCRALTVLCVAPDREHLAELKRATVSADWELAPGATDEAGALDQLDSEHPHVVVVVGAFDGFVAEARRRYPFLRIVTDTPSPEATVVADRLEDVRAVLKGLPWPAGPIT*
Ga0134071_107084652	3300010336	Grasslands Soil	CVASDPEALAALKRASVSADWELAPGATTEADALAQLNEERPHIIVAFGDFDRFVAEAHKAYPALRIVVDRDLPGATAVATSLEEVRGVLKGLPRPGGPVR*
Ga0137716_101069614	3300010938	Hot Spring Fe-Si Sediment	MCRALKVLCVAPDRRSLAELKRATVSADWELAPGATTEGEALVQLEGERPHVLVALGPFDGLVREARHRFPAMRIVTDRDLPGATVVVASLEEVRGAVGGLPRAGGPVR*
Ga0137407_118020782	3300012930	Vadose Zone Soil	QEAGVAVTMCRALTVLCVASDAEALAALKRATVSAEWELAPGATTEADALQQLREERPHLVVVFGDFSHFVAEAREAFPSLRIVADRDLPGATAVATSLDEVRGALKELPRPGGPVL*
Ga0153915_100604262	3300012931	Freshwater Wetlands	VCRALKVLCVAPDDETLAALKRATVSADWELAPGATSEATALAQLHEERPHIVVVFGPFEGFVAAAREAYPFLRIVTDRDLPGATAVATSLEEVRGAVKGLPRPGGPVR*
Ga0184605_100687241	3300018027	Groundwater Sediment	MCRALKVLCVASDPEALAALKRASVSADWELAPGATTEAEALAQLNEERPHIVVAFGDVERFVAEARRAYPVLRIVVDRDLPGATAVATSLEEVRDVLKGLPRPGGPVR
Ga0184605_101487032	3300018027	Groundwater Sediment	LKVLCVASDPEALAALKRASVSADWELAPGATTETEALAQLNEERPHIVVAFGDFERFVAEAREAYPVLRIVVDRDLPGATAVATSLEEIRAVLKGLPRPGGPVR
Ga0184634_100000599	3300018031	Groundwater Sediment	VCRALKVLCVAPDGDALAALKRAAVTAEWELSLGATTERQALAQMESERPHVLVVFGDFAGLVGKAREAYPFMRIVADRDLPGATVVAASMDEVRDAVKGLPRPGGPVR
Ga0184619_100273003	3300018061	Groundwater Sediment	MCRALKVLCVASDPEALAALKRATVSADWELAPGATTEAEALAQLNEERPHIVVAFGDVERFVAEARRAYPVLRIVADRDLPGATAVATSLEEIRAVLKGLPRPGGPVR
Ga0184637_100233542	3300018063	Groundwater Sediment	VCRALKVLCVAPDGDALAALKRAVVTAEWELSLGATTEREALAQMESERPHVLVVFGDFAGLVGKAREAFPFMRIVADRDLPGATVVAASMEEVRDAVKGLPRPGGPVR
Ga0184637_102612141	3300018063	Groundwater Sediment	VCRALKVLCVAPDRERLAALKRAALSAAWELTPGATTEDAALAQLESERPHVLVVFGDFAGVVAKAREAYPFIRI
Ga0184633_100340694	3300018077	Groundwater Sediment	VCRALKVLCVAPDRERLAALKRAAVSAAWELTPGATTEDAALAQLESERPHVLVVFGDFAGVVAKAREAYPFIRIVADRDLPGATVIAASLEEVRGAVKGLLRSGGPVR
Ga0184639_100431134	3300018082	Groundwater Sediment	VCRALKVLCVAPDRERLAALKRAALSAAWELTPGATTEDAALAQLESERPHVLVVFGDFAGVVAKAREAYPFIRIVADRDLPGATVIAASLEEVRGAVKGLLRSGGPVR
Ga0187774_102545702	3300018089	Tropical Peatland	VCRALKVLCVAEDADRLAELKRAAVSSDWELSSGATSEEEALAELNSEHPHVVVVFGEFGGFVATALDRFPYLRVVADRDLPGASVVATSLEEVRGAIRGLPRPGGPIRSSGG
Ga0190265_128532572	3300018422	Soil	MCRALKVLCVADDPDALAALKRAAVSAEWELTPGATDPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVSDRDLPGAATVVGSLEEVRSAVLGRSRPGPVR
Ga0190270_108932112	3300018469	Soil	MCRAVKVLCVATDVESLGALKRATVAAEWELSAGATDAAGALAQLDEERPHFLVVFGPFHQLVADARERYPALRIVSDRDLPGADVVATSLEEVRGALLGAPRPGGPVR
Ga0184643_12615981	3300019255	Groundwater Sediment	MCRALKVLCVASDPEALAALKRASVSADWELAPGATTETEALAQLNEERPHIVVAFGDVERFVAEARRAYPVLRIVADRDLPGATAVATSLEEVRGVLKGLPRPGGPVR
Ga0190264_100423403	3300019377	Soil	MCRALKVLCVAEDSAALAELKRAAVSAEWELAPGATAPDEAIRQLHEERPHVVVAFGAFEGFVARALEAYPALRVVTDRDMPGAGAIVGSLEEVRSAVSGRSRPGPVR
Ga0196964_100514022	3300020202	Soil	MCRALKVLCVAPDVETLAALKRAAVSADWELAAGASDEELALAQLHEERPHVVVVFGAVFDGFVRRALDAYPALRVVADHDVEGAAAVVAGADEVRDAVLGRSRPGPVT
Ga0210382_100575742	3300021080	Groundwater Sediment	MCRALKVLCVASDPEALAALKRATVSADWELAPGATTEAEALAQLNEERPHIVVAFGDVERFVAEARRAYPVLRIVADRDLPGATAVATSLEEVRDVLKGLPRPGGPVR
Ga0196959_100298602	3300021184	Soil	MCRALKVLCVAPDVETLAALKRAAVSADWELAAGASDEELALAQLHEERPHVVVVFGAVFDGFVRRALDAYPALRVVADHDVEGAAAVVAGPDGVRDAVLGRSRPGPVT
Ga0212093_100154637	3300022554	Hot Spring Sediment	MCRALKVLCVAEDAEGLAALKRAAVSAEWELAPGATEEAEALAQLHAERPHVVVVFGPFEGFVRAAREAYPFLRIVADRDLPGATVVATSLEEVRGAVKGLPRPGGPVR
Ga0209322_100162933	3300025146	Soil	VCRALRVLCVAEDTQALSALKRATVSTEWELVAGATDEAEALRQLHEDRPQVVVVFGPFGRFVSRALEAYPALRVVADRDLPGASAVVTETEEVRAAVLGRTRPGGPVGPGRPGGSGV
Ga0209108_106225361	3300025165	Soil	MCRALKVLCVAEDPAALGRLKRAAASAEWELAPGASNEAEALRQLHEGRPHVVIVFGAFDGFVAKALEAYPALRVVADRDLPGASAVAASLEEVRDAVMGHPRPGGPVR
Ga0209642_105423641	3300025167	Soil	MCRALKVLCVAEDRDALSALKRAMASAEWELAPGAVTGEEATRQLHEERPHVVVVFGDHARFVASAREAFPSLRIVTDRDVPGANVVVASPEQARAAALGRAGLRGTSLREEDRESQ
Ga0209324_100152436	3300025174	Soil	VCRALRVLCVAENTQALSALKRATVSTEWELVAGATDEAEALRQLHEDRPQVVVVFGPFGRFVSRALEAYPALRVVADRDLPGASAVVTETEEVRAAVLGRTRPGGPVGPGRPGGSGV
Ga0209172_100203605	3300025310	Hot Spring Sediment	VCGALVVLCVAGDADALVELKRATVSAAWELAPGATTEEEALRQLGEERPHVLVAFGDFARLVRAARERSPDLRIVTDRDLPGATAVATSLEEVRGAVIGAPRPGGPAR
Ga0209172_100226363	3300025310	Hot Spring Sediment	MCVALKVLCVAEDRSALAALKRAVASAEWELAPGAVNEEEAIGQLHGERPHVVVVFGDFGGFVAAARQAFPALRIVADRDLPGVSVVAGSLEAAREAVLGRLAP
Ga0209321_100712952	3300025312	Soil	LMCRALKVLCVAEDADALAALKRAAGAAEWELAPGATSEEEALAQIESERPHVLVVLGSFEGLVARALERRPEMRVVADRELGGATVVVDSIEDVRAAVLGMPRHGGAVR
Ga0209431_102487271	3300025313	Soil	VLCVAEDTQALSALKRATVSTEWELVAGATDEAEALRQLHEDRPQVVVVFGPFGRFVSRALEAYPALRVVADRDLPGASAVVTETEEVRAAVLGR
Ga0209431_108261182	3300025313	Soil	VCRALKVLCVAEDADALAALKRASVSPEWELVSGATDEAEALRQLYEERPHVVVAFGPFEGFVARALESYPALRVVVDRAVPGASAVVTSPEEVRAAVLGGSRPGGPVGS
Ga0209519_100439614	3300025318	Soil	VCRALRVLCVAEDTQALSALKRATVSTEWELVAGATDEAEALRQLHEDRPQVVVVFGPFGRFVSRALEAYPALRVVADRDLPGASAVVTETEEVRAAVLGRT
Ga0209519_101617272	3300025318	Soil	VCRALKVLCVAPDRERLAALKRAAVSAAWELTPGATTEDAALAQLESERPHVLVVFGDFAGVVAKAREAYPFIRIVADRDLPGATVIAASLEE
Ga0209641_100795341	3300025322	Soil	VCRALKVLCVAEDADALAALKRASVSPEWELVSGATDEAEALRQLYEERPHVVVAFGPFEGFVARALESYPALRVVVDRAVPGASAVVTSPEEVRAAVLGGSRPGGPVGSGRPSGSDG
Ga0209640_105623433	3300025324	Soil	VCRALRVLCVAEDTQALSALKRATVSTEWELVAGATDEAEAMRQLHEERPQVVVVFGAFEGFVARALEAYPALRVVADRDLPGANAVVRETEEV
Ga0209640_108956162	3300025324	Soil	VCRALKVLCVAPDRERLAALKRAAVSAGWELTPGATTEDAALAQLEFKRPHVLVVFGDFAGLVGKAREAFPFMRIVADRDLPGATVVAASIDEVRDAVKGLPRPRGPVR
Ga0209341_100254965	3300025325	Soil	VCRALKVLCVAEDGEALDALKRAAVSSEWELVGGATSEEEGLRQLHEERPHVVVAFGPFGGFVARALEAYPALRVVADRDLPGASVVAGSLQQVRAVVLGRSRPGGPVG
Ga0209341_100471925	3300025325	Soil	VCRALKVLCVAEDADALAALKRASVSPEWELVSGATDEAEALRQLYEERPHVVVAFGPFEGFVARALESYPALRVVVDRAVPGASAVVTSPEEVRAAVLGGSRPG
Ga0209341_104093362	3300025325	Soil	VCRALKVLCVAPDGDALAALKRAAVTAEWEVSPGAITEREALAQMESERPHVLVVFGDFAGLVGKAREAFPFMRIVADRAVPGATAVAASMEEVRDAVKGLPRPGGPVR
Ga0209341_104199702	3300025325	Soil	MCRALKVLCVAEDEDALAALKRASVSMEWELVFGATDEAEALRQLHEERPHVVVVFGPFEGFVARALESYPALRVVVDRAVPGASAVVTSPEEVRAAVLGRSRPGGPVGSRRPGGSDG
Ga0209342_1000235619	3300025326	Soil	VCRALRVLCVAEDTQALSALKRATASTEWELVAGATDEAEALRQLHEDRPQVVVVFGPFGRFVSRALEAYPALRVVADRDLPGASAVVTETEEVRAAVLGRTRPGGPVGPGRPGGSGV
Ga0209342_100921041	3300025326	Soil	VCRALKVLCVAEDADALAALKRASVSPEWELVSGATDEAEALRQLYEERPHVVVAFGPFEGFVARALESYPALRVVVDRAVPGASAVVTSPEEVRAAVLGGSDG
Ga0209751_113344792	3300025327	Soil	VCRALRVLCVAEDAQALSVLKRATVSAEWELVAGATDEAEAMRQLHEERPQVVVVFGAFEGFVARALEAYPALRVVADRDLPGANAVVRETEEVRAAVLGRTHPGGPVGPGRPGGSGV
Ga0207646_100552053	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCRALKVLCVAADAEALDALKRATVSAEWELAPGATTEAEALVQLREERPHLVVVFGDFGHFVARARDAFPSLRIVADRDVPGATAVATSLDEVRGALKALPRPGGPVL
Ga0256867_100288023	3300026535	Soil	MCRALKVLCVAEDPDALAALKRAAVSAEWELTPGATGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDGPGAVTVVGSLEEVRSAVLGRSRPGPVR
Ga0209897_10215202	3300027169	Groundwater Sand	VCRALKVLCVAPDGDALAALKRAAVTAEWELSPGATTEQEALAQLKSERPHVLIVFGDFAGLVGKAREASPFMRIVADRDLPGATVVAASMEE
Ga0209899_10425872	3300027490	Groundwater Sand	VCRALKVLCVAPDGDALAALKRAAVTAEWELSPGATTEQEALAQLKSERPHVLIVFGDFAGLVGKAREASPFMRIVADRDLPGATVVAASMEEVRDAVKGLPRPGGPVR
Ga0214468_10737252	3300027647	Soil	MCRALKVLCVAEHPDALAALKRAAVSAEWELTPGATGLEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVTDRDGPGAVTVVGSLDEVRSAVLGRSHPGPVR
Ga0209286_10135263	3300027713	Freshwater Sediment	VCRALKVLCVAEDAESLAALKRATVSADWELAPGATTPEEALAQLETEHPHMLVAFGDLGAFVAAARRAHPTLRIVTDRDLPGATVVATSLDEVRRALHALPRPGGPVL
Ga0209287_101170801	3300027792	Freshwater Sediment	GSSVCRALKVLCVAEDAESLAALKRATVSADWELAPGATTPEEALAQLETEHPHMLVAFGDLGAFVAAARRAHPTLRIVTDRDLPGATVVATSLDEVRRALHALPRPGGPVL
(restricted) Ga0233416_103620062	3300027799	Sediment	VCRALEVLCVAETPEALAALKRAAVSSDWELAPGATTGEDALAQLRDERPHVVVAFGDLGGFVAAAREAFPSLRIVTDRDLPGATVVATSLEEVRAAVRGLPRPGG
Ga0209797_102041222	3300027831	Wetland Sediment	VCRALLVLCLAEDRDALAALKRATVSAEWELAPGATSEADALEQLRAERPHIVVVFGDFAGFVAAARGAYPFLRIVTDRDLPGATVVAASLEEVRGAVRGLPRPGGPVR
Ga0209798_105524741	3300027843	Wetland Sediment	ALLVLCLAEDRDALAALKRATVSAEWELAPGATSEADALEQLRAERPHIVVVFGDFAGFVAAARGAYPFLRIVTDRDLPGATVVAASLEEVRGAVKGLPRPGGPIR
Ga0256864_10125363	3300027964	Soil	MCRALKVLCVAEDPDALAALKRAAVSAEWELTPGATGPEEALRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRAGPGAVTIVGSLDEVRSAVSGRSRPGPVR
(restricted) Ga0233417_105252402	3300028043	Sediment	VCRALEVLCVAETPEALAALKRAAVSSDWELAPGATTGEDALAQLRDERPHVVVAFGDLGGFVAAAREAFPSLRIVTDRDLPGATVVATSLEEVRAAVRGLPRPGGPVR
Ga0307282_101662442	3300028784	Soil	MCRALKVLCVASHPEGLAALKRASVSADWELAPGATTETEALAQLNEERPHIVVAFGDFERFVAEARKAYPVLRIVVDRDLPGATAVATSLEEVRDVLKGLPRPGGPVR
Ga0307312_100125162	3300028828	Soil	MCRALKVLCVASHPEGLAALKRASVSADWELAPGATTETEALAQLNEERPHIVVAFGDFERFVDEARKAYPVLRIVVDRDLPGATAVATSLEEVRDVLKGLPRPGGPVR
Ga0272449_11535322	3300029977	Sediment	MCRALKVLCVAEDAESLAALKRAAVSAEWELAPGATDEAEALAQLHAERPHVVVVFGPFEGFVRAAREAYPFLRIVADRDLPGATVVATSLEEVRGAVKGLPRPGGPVR
Ga0299907_101662832	3300030006	Soil	MCRALKVLCVAEDPDALAALKRAAVSAEWELTPGATGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDVPGAGVVVGSLDEVRSAVLGRSHPGPVR
Ga0299907_104713412	3300030006	Soil	MCRALKVLCVAEDPEALAELKRAAVSAEWELTPGATGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDGPGAVTVVGSLDEVRSAVSGRSHPGPVR
Ga0299907_106258872	3300030006	Soil	MCRALKVLCVAEHPDALAALKRAAVSAEWELTPGATGLEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVTDRDGPGAVTVVGSL
Ga0299906_102425982	3300030606	Soil	MCRALKVLCVAEDPDALAALKRAAVSAEWELTPGATGPEEAVRQLHQERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDGPGAVTVVGSLEEVRSAVLGRSRPGPVR
Ga0302046_101020184	3300030620	Soil	MCRALKVLCVAEDPDALAALKRAAVSAEWELTPGATGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDVPGAGAVVGSLDEVRSAVLGRSHPGPVR
Ga0302046_106412532	3300030620	Soil	MCRALKVLCVAEDGPALAALKRAAVSADWELAQGATNASDALRQLNEERPHVVVVFGPFDGFIRAAIEAYPAIRVVADRQVPGASVVVGSLEDVRDAVKGRPRPGGPVR
Ga0299913_100411936	3300031229	Soil	AMCRALKVLCVAEHPDALAALKRAAVSAEWELTPGATGLEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVTDRDGPGAVTVVGSLDEVRSAVLGRSHPGPVR
Ga0299913_103102342	3300031229	Soil	MCRALKVLCVAEDPDALAALKRAAVSAEWELTPGATGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDVPGAWAVVGSLDEVRSAVLGRSHPGPVR
Ga0214473_100722995	3300031949	Soil	VCRSLKVLCVAEDPQALDALKRATVSAEWELVSGAIGENEALRRLHEERPHVVVAFGPFGGLVARALEAYPALRVVADRDLPGAASVVTSPEEVRGAVLGRPRPGGPVVEGRPGGAVGRLRRILPMRSTSPWSAPSGWRR
Ga0214473_103217893	3300031949	Soil	EGLALAVCRALKVLCVAEDAEGLAALKRAAVSADWELAPGAATEQDGLEQLEADRPHVVVAFGDLGAFVEAARRAYPFLRIVTDRDLPGATVVATSLEEVRRAVQGLPRPGGPVR
Ga0214473_103362672	3300031949	Soil	VCRALKVLCVAGDADALAALKRATVSTEWELVSGATGEAEALRQLHEERPHVLVVFGPFEGFVARALEAYPALRVVSDRDVRGAGAVVSSMDEVRGAVLGRPRPGGPVGRPGGFDD
Ga0214473_103866343	3300031949	Soil	MCRALKVLCVAEDPEALAALKRAAVSAEWELTPGATGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDGPGAVTVVGSLEEVRSAVLG
Ga0214473_113734222	3300031949	Soil	VCRALRVLCVAEDTDALSALKRATVSTEWELVAGATDEAAALRQLHEERPQVVVVFGPFEGFVARALEAYPALRVVADRDLPGASAVVRAPEEVGAAVLGRSRPGGPVGPRRPGGSGV
Ga0326597_102145162	3300031965	Soil	MCRALKVLCVAEDPEALAALKRAAVSAEWELTPGATGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDGPGAGTVVGSLEEVRSAVLGRSRPGPVR
Ga0326597_102245862	3300031965	Soil	VCRALKVLCVAPDGDALAALKRAAVTAEWELSPGATTEEEALAQLESERPHVLVVFGDFAGFVGKAREAYPFIRIVADRDVPGTTVVAASMKQVRDAVKGLPRPRGPVR
Ga0326597_102247563	3300031965	Soil	VCRALKVLCVAPDGDALAALKRAAVTAEWEVSPGATTEREALAQMESERPHVLVVFGDFAGLVGKAREAFPFMRIVADRDVPGATAVAPSMEEVRDAVKGLPRPGGPVR
Ga0326597_103594512	3300031965	Soil	VLCVAPDGDALAALKRAAVSAEWEVSPGAATEQEALARLQSERPHVLVVFGDFAGLVGKAREAFPFMRIVADRDVPGATVVVASMEEVRDAVKGLPRPGGPVR
Ga0326597_104584042	3300031965	Soil	VCRALKVLCIAEDPGALAALKRAAISADWELTPGATAPEEAVRQLHEERPHVIVAFGPFEGFVAKALEAYPALRVVSDRDVPGAATVVGSLEEVRSAVLGRPRPGPVR
Ga0214472_104970452	3300033407	Soil	VCRALKVLCVAGDADALAALKRATVSTEWELVSGATGEAEALRQLHEERPHVLVVFGPFEGFVARALEAYPALRVVSDRDVPGAGAVVSSMDEVRGAALGRPRPGGPVGRPGGFDD
Ga0214472_105152542	3300033407	Soil	MCRALKVLCVAEDPEALAALKRAAVSAEWELTPGATGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDGPGAVTVVGSLEEVRSAVLGRSRPGPVR
Ga0214472_113478311	3300033407	Soil	MCRALKVLCVAEHPDALAALKRAAVSAEWELTPGAIGPEEAVRQLHEERPHVVVAFGAFEGFVAQAIEAYPALRVVADRDVPGAGAVVGSLDEVRSAVLGRSHPGPVR
Ga0316622_1027872132	3300033416	Soil	GEEALAALKRATVSAEWELAPGATTQVEALAQLDRERPHMVVAFGDQGAFVAAARKAYPALRIVTDRDLPGATRVATSLDEVRGALRAQPRPGGPVL
Ga0214471_104736072	3300033417	Soil	VCRALKVLCVAGDADALAALKRATVSTEWELVAGATGEAEALRQLHEERPHVLVVFGPFEGFVARALEAYPALRVVSDRDVPGAGAVVSSMDEVRGAVLGRPRPGGPVGRPGGFDD
Ga0326726_117919542	3300033433	Peat Soil	LGVRPVPGLPAERLALAVCRALLVLCVAEDAEALAELKRATVSADWELAPGAVTEEEALRQLHAERPHVVVVFGDQGGFVAAAHEAYPALRIVTNRDLPGATAVATSLDEVRDAVKGLSRPGGPVG
Ga0326726_124659401	3300033433	Peat Soil	EDALGALKRATVSADWELAPGATTEEEATRQLHERRPQVLVAFGDFGPFVARALEAYPYLRVVADRELAGATAIASSLEEVRDAIRGRGRPGGPVR
Ga0364940_0076737_17_319	3300034164	Sediment	LKVLCVAEGADALAALKRASVSPEWELVSGATDEAEALRQLYEERPHVVVAFGPFEGFVARALESYPALRVVVDRAVPGASAVVTSPEEVRAAVLGGSDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters