NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069298

Metagenome / Metatranscriptome Family F069298

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069298
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 61 residues
Representative Sequence LHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIRSWKI
Number of Associated Samples 119
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 54.47 %
% of genes near scaffold ends (potentially truncated) 54.03 %
% of genes from short scaffolds (< 2000 bps) 90.32 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (82.258 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(8.064 % of family members)
Environment Ontology (ENVO) Unclassified
(16.935 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.613 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.13
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF02371Transposase_20 70.97
PF13701DDE_Tnp_1_4 2.42
PF13683rve_3 2.42
PF00665rve 1.61
PF01548DEDD_Tnp_IS110 0.81
PF03631Virul_fac_BrkB 0.81
PF01527HTH_Tnp_1 0.81
PF13276HTH_21 0.81
PF13365Trypsin_2 0.81
PF12762DDE_Tnp_IS1595 0.81
PF00529CusB_dom_1 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG3547TransposaseMobilome: prophages, transposons [X] 71.77
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 1.61
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 1.61
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 1.61
COG4584TransposaseMobilome: prophages, transposons [X] 1.61
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.26 %
UnclassifiedrootN/A17.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2035918004|FACENC_F56XM5W01B12BRAll Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei518Open in IMG/M
2140918024|NODE_199819_length_2056_cov_18.361868Not Available2106Open in IMG/M
2170459010|GIO7OMY01AGLBVNot Available516Open in IMG/M
2189573004|GZGWRS401BABA3All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei509Open in IMG/M
3300000567|JGI12270J11330_10017487All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4527Open in IMG/M
3300000732|JGI12023J11887_1000313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2438Open in IMG/M
3300001356|JGI12269J14319_10128615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1146Open in IMG/M
3300001418|JGI20188J14859_1002962All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2332Open in IMG/M
3300001527|A3513AW1_1179673All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria783Open in IMG/M
3300001593|JGI12635J15846_10238098All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1177Open in IMG/M
3300001622|JGI20252J16333_100248Not Available1157Open in IMG/M
3300002245|JGIcombinedJ26739_100266854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1598Open in IMG/M
3300002549|JGI24130J36418_10072220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium838Open in IMG/M
3300003218|JGI26339J46600_10021942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1849Open in IMG/M
3300004139|Ga0058897_11106587All Organisms → cellular organisms → Bacteria → Proteobacteria950Open in IMG/M
3300004635|Ga0062388_100969493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria823Open in IMG/M
3300005168|Ga0066809_10025065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1231Open in IMG/M
3300005181|Ga0066678_10368880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales949Open in IMG/M
3300005277|Ga0065716_1006926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. YR577781Open in IMG/M
3300005329|Ga0070683_100437800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1247Open in IMG/M
3300005333|Ga0070677_10041932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1809Open in IMG/M
3300005335|Ga0070666_10073046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2336Open in IMG/M
3300005335|Ga0070666_10189287Not Available1445Open in IMG/M
3300005434|Ga0070709_10247833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1282Open in IMG/M
3300005435|Ga0070714_100791421Not Available918Open in IMG/M
3300005435|Ga0070714_100969091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria827Open in IMG/M
3300005436|Ga0070713_100520687All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1124Open in IMG/M
3300005436|Ga0070713_101251101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria719Open in IMG/M
3300005530|Ga0070679_100097033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2935Open in IMG/M
3300005544|Ga0070686_100109627All Organisms → cellular organisms → Bacteria → Proteobacteria1878Open in IMG/M
3300005712|Ga0070764_10101258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1539Open in IMG/M
3300005713|Ga0066905_100162254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1625Open in IMG/M
3300006047|Ga0075024_100259223All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae837Open in IMG/M
3300006050|Ga0075028_100183394All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1122Open in IMG/M
3300006172|Ga0075018_10047111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1782Open in IMG/M
3300006173|Ga0070716_101004711Not Available660Open in IMG/M
3300006175|Ga0070712_101811471All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae534Open in IMG/M
3300006176|Ga0070765_100057490All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3205Open in IMG/M
3300006852|Ga0075433_11489906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales584Open in IMG/M
3300006880|Ga0075429_100554905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae1007Open in IMG/M
3300006949|Ga0075528_10017846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1752Open in IMG/M
3300006950|Ga0075524_10055185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1651Open in IMG/M
3300007076|Ga0075435_101326491Not Available630Open in IMG/M
3300009029|Ga0066793_10630623All Organisms → cellular organisms → Bacteria → Proteobacteria610Open in IMG/M
3300009143|Ga0099792_10548619All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria730Open in IMG/M
3300009156|Ga0111538_11246831All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria939Open in IMG/M
3300009521|Ga0116222_1370016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria622Open in IMG/M
3300009522|Ga0116218_1504045All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus denitrificans539Open in IMG/M
3300009649|Ga0105855_1296562Not Available513Open in IMG/M
3300009649|Ga0105855_1299567Not Available511Open in IMG/M
3300009651|Ga0105859_1082886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria846Open in IMG/M
3300010040|Ga0126308_10331309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1005Open in IMG/M
3300010154|Ga0127503_10220112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria503Open in IMG/M
3300010159|Ga0099796_10127465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria984Open in IMG/M
3300010301|Ga0134070_10392703All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales545Open in IMG/M
3300010301|Ga0134070_10451357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria515Open in IMG/M
3300010341|Ga0074045_11036827All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria514Open in IMG/M
3300010343|Ga0074044_10480013Not Available812Open in IMG/M
3300011106|Ga0151489_1295958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2163Open in IMG/M
3300011999|Ga0120148_1087389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria607Open in IMG/M
3300012232|Ga0137435_1023410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1770Open in IMG/M
3300012473|Ga0157340_1008890Not Available680Open in IMG/M
3300012917|Ga0137395_10880561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales648Open in IMG/M
3300012925|Ga0137419_10347239All Organisms → cellular organisms → Bacteria1147Open in IMG/M
3300012989|Ga0164305_11107059All Organisms → cellular organisms → Bacteria → Proteobacteria681Open in IMG/M
3300013306|Ga0163162_12461202All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium599Open in IMG/M
3300013765|Ga0120172_1068738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria887Open in IMG/M
3300014158|Ga0181521_10230587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. B1990Open in IMG/M
3300014199|Ga0181535_10817513Not Available527Open in IMG/M
3300014501|Ga0182024_11544514All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria756Open in IMG/M
3300014638|Ga0181536_10312233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria727Open in IMG/M
3300015371|Ga0132258_11963867All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1472Open in IMG/M
3300015374|Ga0132255_102235999All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium834Open in IMG/M
3300017995|Ga0187816_10331549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae670Open in IMG/M
3300017998|Ga0187870_1131230Not Available934Open in IMG/M
3300018004|Ga0187865_1193733All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria695Open in IMG/M
3300018027|Ga0184605_10084581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1387Open in IMG/M
3300018028|Ga0184608_10015165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2707Open in IMG/M
3300018038|Ga0187855_10286371All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. T1473964Open in IMG/M
3300018058|Ga0187766_10435144All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria873Open in IMG/M
3300018469|Ga0190270_12132460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales620Open in IMG/M
3300019875|Ga0193701_1083068All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria617Open in IMG/M
3300020582|Ga0210395_10317752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1171Open in IMG/M
3300020583|Ga0210401_10247132All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1643Open in IMG/M
3300021432|Ga0210384_11545241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria569Open in IMG/M
3300022518|Ga0224548_1029314Not Available601Open in IMG/M
3300022694|Ga0222623_10097649Not Available1142Open in IMG/M
3300022756|Ga0222622_11296609All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria536Open in IMG/M
3300022881|Ga0224545_1008105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1644Open in IMG/M
(restricted) 3300023208|Ga0233424_10080088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1446Open in IMG/M
3300025324|Ga0209640_10301415All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1339Open in IMG/M
3300025527|Ga0208714_1024428All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1446Open in IMG/M
3300025553|Ga0208080_1039433Not Available1319Open in IMG/M
3300025619|Ga0207926_1082459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria811Open in IMG/M
3300025857|Ga0209014_10202350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria687Open in IMG/M
3300025938|Ga0207704_10516488Not Available965Open in IMG/M
3300025960|Ga0207651_10677148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium907Open in IMG/M
3300026276|Ga0209847_1061719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. ERR 942719Open in IMG/M
3300026285|Ga0209438_1111051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria802Open in IMG/M
3300026496|Ga0257157_1085306All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria547Open in IMG/M
3300027383|Ga0209213_1038296All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium906Open in IMG/M
3300027546|Ga0208984_1006329All Organisms → cellular organisms → Bacteria2151Open in IMG/M
3300027605|Ga0209329_1002578Not Available2890Open in IMG/M
3300027669|Ga0208981_1025259Not Available1515Open in IMG/M
3300027818|Ga0209706_10402050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria637Open in IMG/M
3300028778|Ga0307288_10183909All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium800Open in IMG/M
3300028873|Ga0302197_10541720All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300028875|Ga0307289_10202666Not Available816Open in IMG/M
3300029636|Ga0222749_10066617All Organisms → cellular organisms → Bacteria → Proteobacteria1626Open in IMG/M
3300030520|Ga0311372_10942157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1151Open in IMG/M
3300030618|Ga0311354_11890447All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300031057|Ga0170834_101535908All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1501Open in IMG/M
3300031184|Ga0307499_10168043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria655Open in IMG/M
3300031231|Ga0170824_112544287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria885Open in IMG/M
3300031708|Ga0310686_115344422All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1076Open in IMG/M
3300031754|Ga0307475_10180937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1682Open in IMG/M
3300031847|Ga0310907_10265636All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium850Open in IMG/M
3300031945|Ga0310913_10171800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1506Open in IMG/M
3300032013|Ga0310906_10147371All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae1367Open in IMG/M
3300032066|Ga0318514_10348946Not Available784Open in IMG/M
3300032118|Ga0315277_11296769All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria639Open in IMG/M
3300032180|Ga0307471_100339530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1607Open in IMG/M
3300034150|Ga0364933_095506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria751Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.06%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil6.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.65%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.03%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.23%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.23%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil3.23%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.23%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.42%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.42%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.42%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.42%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.42%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.61%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.61%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.61%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.61%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.61%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.81%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.81%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.81%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.81%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.81%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.81%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.81%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.81%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2035918004Soil microbial communities from sample at FACE Site 2 North Carolina CO2-EnvironmentalOpen in IMG/M
2140918024Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
2189573004Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)EnvironmentalOpen in IMG/M
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300000732Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2EnvironmentalOpen in IMG/M
3300001098Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001418Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012EnvironmentalOpen in IMG/M
3300001527Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001622Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002549Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212EnvironmentalOpen in IMG/M
3300003218Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1EnvironmentalOpen in IMG/M
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005277Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006949Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16BEnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009649Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059EnvironmentalOpen in IMG/M
3300009651Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012473Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610Host-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022518Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022881Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24EnvironmentalOpen in IMG/M
3300023208 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MGEnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025527Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025553Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025857Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026276Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060 (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028873Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
FACENCA_61887802035918004SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIRSWKI
B_all_v_008770902140918024SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVYLDPPGLIRSWRIYGFGQRLXXXXAKNH
F62_096919202170459010Grass SoilARSTSHSVAARNGCTNIPLAAVGAQEDETILEDGFFKVHVRIRFVHLDPPGLIKSGKI
FG2_080265002189573004Grass SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPD
JGI12270J11330_1001748753300000567Peatlands SoilMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGHARVRFVHLDPPGLIKSWKI*
JGI12023J11887_100031333300000732Forest SoilLHDAARFRARSTSHSVAALGGCTNIPLAAVGAQEDETILESGFLGHAKVRFVHLDPPGLFKSWKI*
JGI12633J13313_10133713300001098Forest SoilTSHSVAVRNGCTNIPLAAGKGQEDDTILIFGALGHGHCRFVHLDPPGLIRSR*
JGI12269J14319_1012861533300001356Peatlands SoilMTRPGPSTINLTSVAAHRGCTNIPLAAVGAQEDETILEDGLFGHARVRFVYLDPPGLIRSWKI*
JGI20188J14859_100296233300001418Arctic Peat SoilMTRPVSEHDPSHSVAAHRGCTNIPLAAVGAQEDETILEDGLFGHAKVRFVHLDPPGLIRSWKI*
A3513AW1_117967313300001527PermafrostMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGLLGQVRVRFVHLDPPGLIKSWKI*
JGI12635J15846_1023809813300001593Forest SoilTSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGHAKVRFVYLDPPGLIRSWKI*
JGI20252J16333_10024823300001622Forest SoilMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETFLKTGFLGHVRMRFVHLDPPGLIKSWKI*
JGIcombinedJ26739_10026685423300002245Forest SoilTLLRDAARFRARSTSHTVAAGGGGCTNIPLAAGRAQEDETILENGFSGQAKVRFVHLDPPGLIRSWKIG*
JGI24130J36418_1007222033300002549Arctic Peat SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVYLDPPGLIKSWRI*
JGI26339J46600_1002194223300003218Bog Forest SoilMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGHVRMRFVHLDPSGLIKSWMI*
Ga0058897_1110658723300004139Forest SoilMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGFLGHVRMRFVHLDPPGLIKSWKI*
Ga0062388_10096949313300004635Bog Forest SoilMTRLVSEHDQTHTVAVRIGCTNIPLAAGKAQEDETILLGGCSSHVAGRFVDPDPPGLIGSWRIRQ*
Ga0066809_1002506513300005168SoilMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGFFGHVRMRFVHLDPPGLIKSWKI*
Ga0066678_1036888013300005181SoilMTRLVFRARSTSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGHARVRFVHLDPPGLIKSRKI*
Ga0065716_100692613300005277Arabidopsis RhizosphereEPDCMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGHVRMRFVHLDPPGLIKSWKI*
Ga0070683_10043780013300005329Corn RhizosphereHSVAARNGCTNIPLAAVGAQEDETILEDGFFGHVRMRFVHLDPPGLIKSWKI*
Ga0070677_1004193223300005333Miscanthus RhizosphereMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGHVRVRFVHLDPPGLIKSWKI*
Ga0070666_1007304633300005335Switchgrass RhizosphereLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFAGHAKVRFVHLDPQD*
Ga0070666_1018928723300005335Switchgrass RhizosphereMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGHVRMRFVHLDPPGLIKSWKI*
Ga0070709_1024783323300005434Corn, Switchgrass And Miscanthus RhizosphereMTRPVYEHDPSHSVAVRNGCTNIPLAAGKGQEDDTILIFGVSGHGHYRFVHLDPPGLIRSR*
Ga0070714_10079142113300005435Agricultural SoilFRARSTSHTVAAGGGGCTNIPLAAGRAQEDETILENGFSGQAKVRFVHLDPPGLIRSWKIG*
Ga0070714_10096909113300005435Agricultural SoilMTRPVYEHDPSHSVAVRNGCTNIPLAAGKGQEDDTILIFGASGHGHYRFVHLDPPGLIRSR*
Ga0070713_10052068713300005436Corn, Switchgrass And Miscanthus RhizosphereMTRLVYEHDPSHSVAVRNGCTNIPLAAGKGQEDDTILIFGASGHGHYRFVHLDPPGLIRSR*
Ga0070713_10125110113300005436Corn, Switchgrass And Miscanthus RhizosphereGRFRTRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGFPGHGLVWFVHPDPPRLIESR*
Ga0070679_10009703333300005530Corn RhizosphereMTRLVSEHDPSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGQVRMRFVHLDPPGLIKSWKI*
Ga0070686_10010962733300005544Switchgrass RhizosphereDCMTRLVSEHDPSHSVAARNGCTNIPLAAVRAQEDETILEDGLFGHVRVRFVHLDPPGLNKSWKI*
Ga0070764_1010125823300005712SoilVSVSEVRARLHDAARFRARSTSHTVAARGGCTNIPLAAGRGSGDETILSIGILGHGYHRFVTRIRQN*
Ga0066905_10016225423300005713Tropical Forest SoilLHDAARFRARSTSHSAAAHGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVHLDPPGLFKSWKI*
Ga0075024_10025922323300006047WatershedsSHSVAARNGCTNIPLAAVGAQEDETILEDGLFGHAKVRFVYLDPPGLIRSWKI*
Ga0075028_10018339413300006050WatershedsIARPGRFLARSTSHSVAVRDGSTKIPLAAVGAQEDETILFCGFSGHRVLRFVHPDSPELIKS*
Ga0075018_1004711123300006172WatershedsLHDAARFRARSTSHPVAAHGGCTNIPLAAVGAQEDETILENGCSGHAKVRFVHLDPQD*
Ga0070716_10100471123300006173Corn, Switchgrass And Miscanthus RhizosphereMTRPVYEHDPSHSVAVCNGYTNIPLAAGKGQEDDTILIFGASGHGHYRFVHLDPPGLIRSR*
Ga0070712_10181147123300006175Corn, Switchgrass And Miscanthus RhizosphereTRLVSEHDPSHTVAVRDGCTNIPLAAGRAQEDENLLENGVSGHGLLRFVHLDPSGLIMP*
Ga0070765_10005749023300006176SoilMISRFRTRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGFSGHGLVWFVHPDPPRLIESR*
Ga0075433_1148990613300006852Populus RhizosphereQAHLRDAARFRARSTSHAVAAHSSCTKIPLSAGRAQEDETILESGISGHGLLRFVYLDPPGLIRSWR*
Ga0075429_10055490513300006880Populus RhizosphereRGSFPSTINLTSVAARNGCTNIPLAAVGAQEDETILEDGFFTMFGCGSSTLDPPGLIKSWKI*
Ga0075528_1001784613300006949Arctic Peat SoilRSNSHTVAARSSCTKIPLAAGRAQEDETILEFGCLSQALTRFVHLDPPRLIMSR*
Ga0075524_1005518533300006950Arctic Peat SoilARSNSHTVAARSSCTKIPLAAGRAQEDETILEFGCLSQALTRFVHLDPPRLIMSR*
Ga0075435_10132649113300007076Populus RhizosphereVIWSFRTRSNSHSVVASCDRTTIPLAAGKAHEDETILKFGFSSHAGFRFVHPDPPRL
Ga0066793_1063062313300009029Prmafrost SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVYLDPPGLIKSRRI*
Ga0099792_1054861923300009143Vadose Zone SoilLHDAARFRARSTSHSVAALGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVHLDPPGLFKSWKS*
Ga0111538_1124683113300009156Populus RhizosphereLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIRS*
Ga0116222_137001623300009521Peatlands SoilVIWLFLARSTSHPVVAQSDCTNIPLAAGGAQEKETILEGGFSGHARVRFVHLDPPGLIRSWKI*
Ga0116218_150404513300009522Peatlands SoilRSTSHTVAVRDGCTNIPLAAGRAQEDETFLENGVSGHGLLRFVHLDPSGLIPS*
Ga0105855_129656213300009649Permafrost SoilTRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGFSGHGLVRFVHPDPPRLIGSR*
Ga0105855_129956723300009649Permafrost SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIRSWKI*
Ga0105859_108288623300009651Permafrost SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIKSWKK*
Ga0126308_1033130923300010040Serpentine SoilMTRLVFRARSTSHSVAARNGCTNIPLAAVGAQEDETSLENGFSGHAKVRFVHLDRQD*
Ga0127503_1022011223300010154SoilLHDAARFRARSTSHPVAAHGGCTNIPLAAVGAQEDETILENGCSGHAKVRFIHPDPQD*
Ga0099796_1012746523300010159Vadose Zone SoilLHDAARFRARSTSHSVAALGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVHLDPPGLIKSWKI*
Ga0134070_1039270323300010301Grasslands SoilLHDTARFRARSTSHSVAARNGCNNIPLAAVGAQEDETILEDWFLGHVRMRFVHLDPPGLIKSW
Ga0134070_1045135723300010301Grasslands SoilQAHLRDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGCSGHAKVRFVHLDPQD*
Ga0074045_1103682723300010341Bog Forest SoilSVIWLFLARSTSHPVVAQSDCTNIPLAAGGAQEDETILNCGFSGHGFQWFVYQDPPGLIRSWKI*
Ga0074044_1048001323300010343Bog Forest SoilARSTSHPVVAQSDCTNIPLAAGGAQEDETILNCGFSGHGFQRFVYQDPPGLIRSWKI*
Ga0151489_129595813300011106SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPHGLIRSWKILGFGQRLSS
Ga0120148_108738913300011999PermafrostRLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILNCGFSGHGFRRFVHLDPPGLTVLED*
Ga0137435_102341013300012232SoilLPDAARLRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVHLDPRTDQVLENLRI
Ga0157340_100889023300012473Arabidopsis RhizosphereLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGLFGHVRVRFVHLDPPGLIKSWKI*
Ga0137395_1088056133300012917Vadose Zone SoilLHDAARFRARSTSHSVAALGGCTNIPLAAVGAQEDETILEDGFSGHAKVRFVHLDAQD*
Ga0137419_1034723923300012925Vadose Zone SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILESGFLGHAKVRFVYLDPPGLFKSWKI*
Ga0164305_1110705923300012989SoilLRDAARFRARSTSHTVAAGGGGCTNIPLAAGRVQEDETILENGFSGQAKVRFVHLDPPGLIRSWKIG*
Ga0163162_1246120223300013306Switchgrass RhizosphereLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIKSWKI*
Ga0120172_106873813300013765PermafrostVIWLFLARSTSHPVAAQCDCTNIPLAAGGAQEDETILEGGFSGHAQVRFVHLDPPRLIMSR*
Ga0181521_1023058713300014158BogSGRRLARSNSHSVAVRDGCANIPLAAVKAQEDETILKCGVSSHVSKRFVHPVRQD*
Ga0181535_1081751313300014199BogLHDAARFRARSTSHTVAAQDGNTNIPLAAAGAQVGETILVIGISGHGLSRFVHPDPPELIRSWKI
Ga0182024_1154451413300014501PermafrostAARFRARSTSHSVAARNGCTNIPLAAVGAQEDETILEDGLLGQVRVRFVHLDPPGLIKSWKI*
Ga0181536_1031223313300014638BogVSESRALLHDAARFRARSTSHTVAAQDGNTNIPLAAAGAQVGETILVIGISGHGLSRFVHPDPPELIRSWKI*
Ga0132258_1196386723300015371Arabidopsis RhizosphereMTRPVSEHDQPHIRLPFDGCTKIPLAAHRAQEDETILENGVLGHGLLRFVHLDPPGLIRSGKMTGFG*
Ga0132255_10223599923300015374Arabidopsis RhizosphereLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGILGHAKVRFVHLDPPGLIRSWKI*
Ga0187816_1033154923300017995Freshwater SedimentLRDAARFRARSTSHTVAAGGGGCTNIPLAAGRAQEDETILENGFSGQAKVRFVHLDPPGLIKSWKI
Ga0187870_113123013300017998PeatlandRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGFSGHGLVRFVHPDPPRLIGSR
Ga0187865_119373313300018004PeatlandSTSHSVAARGGCTNIPLAAGEAQEDETILDNGFSGHGLARFVHPDPPRLIGSR
Ga0184605_1008458123300018027Groundwater SedimentLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFSGHAKVRFVHLDPQD
Ga0184608_1001516553300018028Groundwater SedimentLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVYLDPPGLFKSWKI
Ga0187855_1028637113300018038PeatlandRSNSHSVAVRDGCTNIPLAAVKAQEDETIPKCGVSSHVSKRFVHPDPPELIGSWKI
Ga0187766_1043514413300018058Tropical PeatlandPGRYRTRSNSHAVAARNGCTNIPLAAGEAQEDETILQSGYSSQPATRFVHPDPPRLIRSR
Ga0190270_1213246023300018469SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFAGHAKVRFVHLDPQD
Ga0193701_108306823300019875SoilLHDAARFRARSTSHSVAALGGCTNIPLAAVGAQEDETILESGFLGHAKVRFVYLDPPGLFKSWKI
Ga0210395_1031775223300020582SoilSHTVAAGGGGCTNVPLAAGRAREDETILENGFSGQAKVRFVHLDPPGLIRSWKIG
Ga0210401_1024713233300020583SoilRFRTRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGVSGHGLVRFVHPDPPRLIGSR
Ga0210384_1154524113300021432SoilNNRALHVDTAAGAARSGCTNIPLAAVEAQEDETILDNGFSGHGLVRFVHPDPPRLIGSR
Ga0224548_102931423300022518SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIRSWK
Ga0222623_1009764913300022694Groundwater SedimentLHDAARFRARSTSHSVAALGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVYLDPPGLFKSWKI
Ga0222622_1129660913300022756Groundwater SedimentRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFSGHAKVRFVHLDPQD
Ga0224545_100810523300022881SoilVIWLFLARSTSHPVVAQSDCTNIPLAAGGAQEDETILNCGFSGHGFQRFVYQDPPGLIRSWKI
(restricted) Ga0233424_1008008823300023208FreshwaterRARSNSHSVAVCDGCTNIPLAAVVAQEDETILESGFSGQTLGRFVHLDPPGLIGSWKILGIR
Ga0209640_1030141523300025324SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVYLDPPGLIRSWRI
Ga0208714_102442823300025527Arctic Peat SoilRLIVSVSESRALLHDAARFRARSTSHTVAAQDGNTNIPLAAAGAQVGETILVIGISGHGQSRFVHPDPPELIRSWKI
Ga0208080_103943323300025553Arctic Peat SoilARSNSHTVAARSSCTKIPLAAGRAQEDETILEFGCLSQALTRFVHLDPPRLIMSR
Ga0207926_108245913300025619Arctic Peat SoilLLLARSTSHSVAVRDGCTNIPLAAAKARLDETILSNGFSGHRDTRFVHPDPPELIRFWKI
Ga0209014_1020235023300025857Arctic Peat SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVYLDPPGLIKSWRI
Ga0207704_1051648813300025938Miscanthus RhizosphereLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIRSWKILGFGSAFI
Ga0207651_1067714833300025960Switchgrass RhizosphereLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFLGHAKVRFVHLDPPGLIRSWKILGFGQR
Ga0209847_106171923300026276Permafrost SoilGSFSRARSTSHSVAARGGCTNIPLAAGGAQEDETILESGVSGHAKVRFVHLDPPGLIGSWEITEFG
Ga0209438_111105123300026285Grasslands SoilHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGCSGHAKVRFVHLDPQD
Ga0257157_108530623300026496SoilFRRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGFSGHGLVWFVHPDPPRLIESR
Ga0209213_103829623300027383Forest SoilLHDAARFRARSTSHSVAALGGCTNIPLAAVGAQEDETILESGFLGHAKVRFVHLDPPGLFKSWKI
Ga0208984_100632913300027546Forest SoilFRTRSTSHSVAARSGCTNIPLAAVEAQEDETILDNGFSGHGLVRFVHPDPPRLIGSR
Ga0209329_100257813300027605Forest SoilRFRTRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGFSGHGLVRFVHPDPPRLIGSR
Ga0208981_102525923300027669Forest SoilLHDAARFRARSTSHSVAALGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVHLDPPGLIKSWKI
Ga0209706_1040205023300027818Freshwater SedimentLFLARSTSHPVVAQSDCTNIPLAAGGAQEDETILNCGFSGHGFRRFVHLDPPGLTVLED
Ga0307288_1018390923300028778SoilMRDAARFRARSTSHTVAAGGGGCTNIPLAAGRAQEDETILENGFSGQAKVRFVHLDPPGLIRSWKIG
Ga0302197_1054172013300028873BogLHDAARFRARSTSHTVAAQDGNTNIPLAAAGAQVGETILVIGISGHGQSRFVH
Ga0307289_1020266613300028875SoilFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEDGFSGHAKVRFVHLDPQD
Ga0222749_1006661713300029636SoilTSHSVAARSGCTNIPLAAGEAQEDETILDNGFSGHGLVRFVHPDPPRLIGSR
Ga0311372_1094215713300030520PalsaSVRDLVVCRTRSTSHSVAARGGCTKIPLAAGGAQEDETILDSGYWVHANARFVDLDPPRRIMSR
Ga0311354_1189044723300030618PalsaHSVAARGGCTKIPLAAGGAQEDETILDSGYWVHANARFVDLDPPRRIMSR
Ga0170834_10153590813300031057Forest SoilSTSHSVAARNGCTNIPLAAVGAQEDETILEDGLLGQVRVRFVHLDPPGLIKSWKI
Ga0307499_1016804313300031184SoilLHDEARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGSLGHAKVRFVHLDPPGLLKSRKI
Ga0170824_11254428723300031231Forest SoilAARFRARSTSHSVAARNGCTNIPLAAVGAQEDETILEDGLLGQVRVRFVHLDPPGLIKSWKI
Ga0310686_11534442213300031708SoilLHDAARFRARSTSHSVAARGGCTNIPLAAVGAQEDETILENGFLGHAKVRFVYLDSPGLIRS
Ga0307475_1018093713300031754Hardwood Forest SoilRTRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGFSGHGLVWFVHPDPPRLIESR
Ga0310907_1026563613300031847SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILEYGFLGHAKVRFVHLDPPGLIRSWKIL
Ga0310913_1017180023300031945SoilSHSVAAHGGCTNIPLAAVGAQEDETILENGFSGHAKVRFVHLDPPGLIRSWKI
Ga0310906_1014737133300032013SoilLHDAARFRARSTSHSVAAHGGCTNIPLAAVGAQEDETILENGFSGHAKVRFVHPDPK
Ga0318514_1034894623300032066SoilVIWLFLARSTSHPVAAQSDCTNIPLAAGGAQEDETILNCGFSGHGFQRFVDLDPPGLT
Ga0315277_1129676923300032118SedimentSHSVAARSDCTNIPLSADGAQEDETILEYGFLGHGSPRFVHLDPPGLIRSWKI
Ga0307471_10033953013300032180Hardwood Forest SoilGRFRTRSTSHSVAARSGCTNIPLAAGEAQEDETILDNGFSGHGLVRFVHPDPPRLIGSR
Ga0364933_095506_54_2303300034150SedimentLHDEARFRARSTSHSVAAHGGCTIIPLAAVGAQEDETILEDGFAGHAKVRFVHLDPQD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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