Basic Information | |
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Family ID | F068928 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 124 |
Average Sequence Length | 49 residues |
Representative Sequence | VATPQDNIIEALEAEIIRLKTELSHTEDRLSEMRKKLDDMAIKLYGGGRN |
Number of Associated Samples | 77 |
Number of Associated Scaffolds | 124 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 6.50 % |
% of genes near scaffold ends (potentially truncated) | 32.26 % |
% of genes from short scaffolds (< 2000 bps) | 91.13 % |
Associated GOLD sequencing projects | 63 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.61 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (79.032 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (56.452 % of family members) |
Environment Ontology (ENVO) | Unclassified (93.548 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (84.677 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.61 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Seawater Marine Marine Seawater Marine Marine Water Column Seawater Marine Hydrothermal Vent Plume Hydrothermal Vent Fluids |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
GBIDBA_100298093 | 3300001683 | Hydrothermal Vent Plume | VATPQDNIIEALEAEIIRLKTELTHTENRLSEMRKKLDNMAIKLYGGGRN* |
JGI26061J44794_10423411 | 3300002919 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN* |
JGI26063J44948_10587941 | 3300002965 | Marine | TVATPQDNIIETLEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN* |
Ga0052235_10059062 | 3300003147 | Marine | VATPQDNIIETLEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN* |
Ga0066848_101317531 | 3300005408 | Marine | VNTPQNKIIEALEAEVARLKTQLSDTEDRLLKMRGKFDDMAIKLYGGGRN* |
Ga0066828_103131022 | 3300005423 | Marine | VTTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMRKKFDDMAIKLYGGGA* |
Ga0066859_100104915 | 3300005425 | Marine | VTTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN* |
Ga0066854_102241761 | 3300005431 | Marine | VATPQDNIIEALEAEIIRLKTQLSQTEDRLSEMRKKFDEMSIKLYGGRRN* |
Ga0066866_101188921 | 3300005514 | Marine | KVDIFITVTTPKNKIIEALEAEVTRLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN* |
Ga0066838_100335303 | 3300005592 | Marine | VNTPQNKIIEALEAEVARLKTQLSDTEDRLLKMRGKFDDMAI |
Ga0066833_100371434 | 3300005595 | Marine | TPQNKIIEALETEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN* |
Ga0066380_100290421 | 3300005948 | Marine | VTTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN* |
Ga0066369_100475362 | 3300005969 | Marine | VATPQDNIIEALEAEIIRLKTEFTHTEDRLSEMRKKLDDMAIKLYGGRRN* |
Ga0066369_102123621 | 3300005969 | Marine | MATPQDNIIEALEAEIIRLKTELAHTEDRLSEMRKKLDEMAIKLYGGARN* |
Ga0066369_102581421 | 3300005969 | Marine | VATPQDNIIEALEAEIIRLKTELSHTEDRLSEMRKKLDDMAIKLYGGGRN* |
Ga0066374_100557103 | 3300006012 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN* |
Ga0066374_102224232 | 3300006012 | Marine | VPTPQDNIIEALEAEIIRLKTQLSQTEDRLSEMRKKFDEMSIKLYGGRRN* |
Ga0066382_102664681 | 3300006013 | Marine | ITVATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN* |
Ga0066382_103474282 | 3300006013 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKK |
Ga0066375_101022361 | 3300006019 | Marine | EALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN* |
Ga0066375_101824982 | 3300006019 | Marine | VSTPQDNIIETLEAEIVRLKAQLSDTEDRLSEMKEKYVEMSIKLYGGRRN* |
Ga0068471_15113863 | 3300006310 | Marine | VATPQDNIIETLEAEIVRLKAQLSDTEDRLSKMKEKNDEMAIKLYGGNRNL* |
Ga0068478_12130722 | 3300006311 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKFDEMSIKLYGGRRN* |
Ga0068472_102244362 | 3300006313 | Marine | VATPQDNIIETLEAEIVRLKAQLSDTEDRLSKMKEKNDEMAIKLYGGRRT* |
Ga0068472_102280891 | 3300006313 | Marine | VTTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMKEKLDEMAIKLYGGNRNR* |
Ga0068472_106660562 | 3300006313 | Marine | VATPQDNIIEALEAEIIRLKTQLSHTEDRLSEMRKKFDEMSIKLYGGRRN* |
Ga0068473_13880731 | 3300006316 | Marine | EAEIVRLKTQLSHTEDRLSEMKERLNEMGIKLYGGNRNR* |
Ga0068481_11551925 | 3300006339 | Marine | VPTPQDNIIEALEAEIIRLKTQLSQTEDRLSEMRKKFDEVSIKLYGGRRN* |
Ga0068481_11951373 | 3300006339 | Marine | VTTPQDKIIEALEAEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN* |
Ga0068481_14221893 | 3300006339 | Marine | VATPQNNIIEELEAEIVRLKTQLSHTEDRLSEMKERLNEMGIKLYGGNRNR* |
Ga0068481_15276872 | 3300006339 | Marine | VTTPQNKIIEALESEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN* |
Ga0068503_103199202 | 3300006340 | Marine | VLSEVDIFITVATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN |
Ga0068503_103247612 | 3300006340 | Marine | VATPQDNIIEELEAEIVRLKTQLSHTEDKLSEMKEKYVEMSIKLYGGRRN* |
Ga0068503_104667492 | 3300006340 | Marine | IAVATPQDKIIEALEAEIIRLKTELTHTEDRLSEMRKKFDDLMIKVYGGRRN* |
Ga0068503_104749201 | 3300006340 | Marine | VATPQDNIIETLEAEIVRLKAQLSDTEDRLSKMKEKNDEMAIKLYGGNRNR* |
Ga0068503_104931562 | 3300006340 | Marine | IETLEAEIVRLKAQLSDTEDRLSEMKEKNDEMAIKLYGGNRNR* |
Ga0068493_106515701 | 3300006341 | Marine | VATPQNNIIETLEAEIVRLKAQLSDTEDRLSEMKEKNDEMAIKLYGGNRNR* |
Ga0068493_109108491 | 3300006341 | Marine | VATPQDNIIEALEAEIIRLKTQLSHTEDRLSKMREKFDEIRIKLYGGRRN* |
Ga0031666_12120161 | 3300006727 | Deep Ocean | IIEALEAEIIRLKTQLSQTEDRLSEMRKKFDEMSIKLYGGRRN* |
Ga0066376_104629561 | 3300006900 | Marine | TLEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN* |
Ga0066376_105928862 | 3300006900 | Marine | VATPQDNIIEALEAEVIRLKTELTHTEDRLSEIRKKLDEMSIKLYGGRRN* |
Ga0066376_107061831 | 3300006900 | Marine | EAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN* |
Ga0066367_11509921 | 3300007291 | Marine | VTTPQNNIIETLEAEIVRLKAQLSDTEDRLSKMKEKNDEMAIKLYGGNRNR* |
Ga0066367_14824931 | 3300007291 | Marine | VATPQYNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN* |
Ga0104999_10040162 | 3300007504 | Water Column | VATLQDNIIETLEAEVIRLKTELNHTEDRLSEMRKKLDDMAIKLYGGGRN* |
Ga0115651_14412151 | 3300008952 | Marine | VATLQDNIIETLEAEVIRLKTELNHTEDRLSEMRKKLDDMAIK |
Ga0114996_101471621 | 3300009173 | Marine | VATPQDNIIESLEAEIIKLKTELTHTEDRLSEMRKKLDDMAIKLYGG |
Ga0114996_103384011 | 3300009173 | Marine | VATPQDNIIDALEAEIIRLKTELTHTEDRLSDMRKKLDDMAIKLYGGARN* |
Ga0114996_103572732 | 3300009173 | Marine | VATPQDNIIEALEAENTRLKTQLSHIEDRLSEMRKKLDDMAIKLYGGARN* |
Ga0114996_103635182 | 3300009173 | Marine | VATPQDNIIEALEAEIIRLKTQLSHTEDRLSDMRKKFDEMSIKLYGGRRN* |
Ga0114996_105598101 | 3300009173 | Marine | VATPQDNIIDVLEAEIIRLKTELAHTEDRLSEMRKKLDDMAIKLYGGARN* |
Ga0114996_105979662 | 3300009173 | Marine | VATPQDNIIDALEAEIIRLKTELSHTEARLSEMRKKLDDMAIKLYGGARN* |
Ga0114996_107444102 | 3300009173 | Marine | VITPQNKIIEALEAEITRLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN* |
Ga0114996_109914271 | 3300009173 | Marine | VATPQDNIIDALEAENARLKTELSHTETRFSEMRKKLNDMAIKLYGGARN* |
Ga0114996_111787431 | 3300009173 | Marine | VDIFITVATPQDNIIEALEAEIIRLKTELTHTEERLLEMRKKFDEMSIKLYGGRRN* |
Ga0114996_112631781 | 3300009173 | Marine | VATPQDKIIEALEAENARLKTDLAHTQERLSKMREKFDELKVILRET* |
Ga0114993_100871632 | 3300009409 | Marine | VATPQDNIIESLEAEIIKLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN* |
Ga0114993_105330401 | 3300009409 | Marine | EALEAEIIRLKTELTHTEDRLSEMRKKLDNMAIKLYGGGRN* |
Ga0114993_107482611 | 3300009409 | Marine | VATPQKNIIEALETEIIRLKTELTHTENRLSEMRKKFDDMAIKLYGGGRN* |
Ga0114993_107865051 | 3300009409 | Marine | VPTPQDNIIEALEAEIIRLKTQLSQTEDRLSEMRKKFDEMSIKLYGGRRS* |
Ga0114993_110972471 | 3300009409 | Marine | VATPQVNIIEALEAEIIRLKTELTHTEDRLLKMREKFDDLMIKVYGGGRN* |
Ga0115002_104366531 | 3300009706 | Marine | ITVITSQNKIIEALEAEITRLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN* |
Ga0115002_110849622 | 3300009706 | Marine | ITVATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDNMAIKLYGGGRN* |
Ga0114999_105846103 | 3300009786 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLNDMAIKLYGGGRN* |
Ga0114999_107191852 | 3300009786 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDNMAIKLYGGGRN* |
Ga0114999_111716841 | 3300009786 | Marine | VATPQNNIIEALETEIIRLKTELTHTENRLSEMRKKFDDMAIKLYGGGRS* |
Ga0133547_113000363 | 3300010883 | Marine | VATPQDNIIEALEAEIIRLKTQLSHTEDRLSAMRKKFDEMSIKLYGGRRN* |
Ga0133547_113117443 | 3300010883 | Marine | VETPQDNIIEDLEAEIIRLKTELIHTENRLSKMRRKFDDLMIKIYGGRRN* |
Ga0138361_11787511 | 3300011321 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGRRN* |
Ga0138359_11160181 | 3300011322 | Marine | ALEAEVTRLKTQLSDTENRLSKMRGKFDDMAIKLYGGGRN* |
Ga0163108_100118492 | 3300012950 | Seawater | VNTPQNKIIEALEAEVARLKTQLSDTENRLSKMRGKFDDMAIKLYGGGRN* |
Ga0211669_10374151 | 3300020254 | Marine | VATPQDKIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN |
Ga0211679_10875101 | 3300020263 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN |
Ga0211662_100120310 | 3300020300 | Marine | VNTPQNKIIEALEAEVARLKTQLSDTEDRLLKMRGKFDDMAIKLYGGGRN |
Ga0211573_11358982 | 3300020327 | Marine | EVTRLKTQLSDTENRLSKMREKFDDMAIKLYGGGHN |
Ga0211661_10366173 | 3300020333 | Marine | TVTTPQDKIIEALEAEVTRLKTQLSDTENRLSKMREKFDDMAIKLYGGGHN |
Ga0211680_100902964 | 3300020389 | Marine | VATPQDNIIETLEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN |
Ga0211575_104232031 | 3300020407 | Marine | VTTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN |
Ga0206680_104498831 | 3300021352 | Seawater | VTTPQDKIIEALEAEVTRLKIQLSDTEDRLSKMRGK |
Ga0206690_105065501 | 3300021355 | Seawater | IEALEAEVTRLKTQLSDTEDRLSKMRNKFDNMAIKLYGGGRN |
Ga0206690_110416521 | 3300021355 | Seawater | MATSQDNIIEALEAEIIRLKTELTHTEDRLSEMREKLDNMAIKLYGGRRN |
Ga0206685_100734472 | 3300021442 | Seawater | VTTSQNKIIEALEAEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN |
Ga0232646_10686633 | 3300021978 | Hydrothermal Vent Fluids | VATPQDNIIEALEAEIIRLKTELAHTEDRLSEMRKKLDEMAIKLYGGGRN |
Ga0187827_101173761 | 3300022227 | Seawater | VATPQDNIIEALEAEITRLKAQLSDTEDKLSKMRERFDEMSIKLYGGRRN |
Ga0187827_107227122 | 3300022227 | Seawater | VTTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMRKKFDDMAIKLYGGGA |
Ga0208206_10292891 | 3300025235 | Deep Ocean | IVRLKAQLSDTEDRLSEMKEKNDEMAIKLYGGNRNR |
Ga0208748_11711422 | 3300026079 | Marine | VATPQDNIIEALEAEIIRLKTEFTHTEDRLSEMRKKLDDMAIKLYGGRRN |
Ga0207963_10857051 | 3300026080 | Marine | VSTPQDNIIETLEAEIVRLKAQLSDTEDRLSEMKEKNDEMAIKLYGGNRNR |
Ga0208113_10344872 | 3300026087 | Marine | VPTPQDNIIEALEAEIIRLKTQLYQTEDRLSDMRKKFDEMSIKLYGGRRN |
Ga0207965_10650731 | 3300026092 | Marine | FVTVTTPQNKIIEALEIEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN |
Ga0207966_10571932 | 3300026119 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN |
Ga0207986_10307423 | 3300026192 | Marine | VNTPQNKIIEALEAEVARLKTQLSDTEDRLLKMRGKFDDMAIKLYGGGR |
Ga0208642_11080881 | 3300026210 | Marine | VDIFITVTTPQDKIIEALEAEVTRLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN |
Ga0208409_10461383 | 3300026212 | Marine | IAVTTPQDKIIEALEAEVARLKTQLSDTEDRLLKMRGKFDDMAIKLYGGGRN |
Ga0208879_13318091 | 3300026253 | Marine | VATPQDNIIEALEAEVIRLKTELTHTEDRLSEIRKKLDEMSIKLYGGRRN |
Ga0208522_10492733 | 3300026254 | Marine | VNTPQNKIIEALEAEVARLKTQLSDTEDRLLKMRGKFDDMAIKLYGGGHN |
Ga0208766_11001102 | 3300026269 | Marine | VNTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN |
Ga0209753_11134502 | 3300027622 | Marine | VTTPQNKIIEALEIEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN |
Ga0209752_10448153 | 3300027699 | Marine | VTTPQNKIIEALESEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN |
Ga0209445_10945262 | 3300027700 | Marine | VPTPQDNIIEALEAEIIRLKTQLSQTEDRLSEMRKKFDEMSIKLYGGRRN |
Ga0209228_10637443 | 3300027709 | Marine | NIFITVTTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN |
Ga0209089_100473922 | 3300027838 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDNMAIKLYGGGRN |
Ga0209089_100558972 | 3300027838 | Marine | VATPQDNIIESLEAEIIKLKTELTHTEDRLSEMRKKLDDMAIKLYGGGRN |
Ga0209089_101389712 | 3300027838 | Marine | VATPQKNIIEALETEIIRLKTELTHTENRLSEMRKKFDDMAIKLYGGGRN |
Ga0209403_104244871 | 3300027839 | Marine | VATPQDNIIEALEAENTRLKTQLSHIEDRLSEMRKKLDDMAIKLYGGARN |
Ga0209501_104339271 | 3300027844 | Marine | VATPQDNIIDVLEAEIIRLKTELAHTEDRLSEMRKKLDDMAIKLYGGARN |
Ga0257111_10879031 | 3300028535 | Marine | ALEAEVARLKTQLSDTEDRLSKMRGKFDDMAIKLYGGGRN |
Ga0302123_100870981 | 3300031623 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDNMAIK |
Ga0302123_104423982 | 3300031623 | Marine | ITVTTPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDNMAIKLYGGGRN |
Ga0310121_102974521 | 3300031801 | Marine | VATPQDNIIEALEAEIIRLKTELTHTEDRLSEMRKKLDDMAIK |
Ga0310123_107899841 | 3300031802 | Marine | IVATPQNNIIEALESEVASLKAQLSHTEDRLSKMKEKLDEMAIKLYGGNRNR |
Ga0310124_102618653 | 3300031804 | Marine | VATPQDNITETLEAEIIRLKTELTHTEDRLSEMRKKLDDMAIKLYGGARN |
Ga0310124_108230402 | 3300031804 | Marine | VATPQDNIIDALEAENTRLKTELSHTEDRLSEMRKKFDEL |
Ga0315319_103741852 | 3300031861 | Seawater | VATPQDNIIEDLEAEIIRLKTELTHTKDRLSKMRKKFDDLMIKVYGGGRN |
Ga0315333_104576311 | 3300032130 | Seawater | NKIIEALEAEVARLKTQLSDTEDRLLKMRGKFDDMAIKLYGGGRN |
Ga0310345_100522625 | 3300032278 | Seawater | MTTPQDKIIEALEAEVTRLITQLSDTEDRLSKMREKFDDMAIKLYGGGRN |
Ga0310345_115763031 | 3300032278 | Seawater | VPTPQDNIIEALEAEIIRLKTQLSQTEDRLSEMRKKFDEVSIKLYGGRRN |
Ga0310345_117753901 | 3300032278 | Seawater | IETLEAEIVRLKAQLSDTEDRLSKMKEKIDEMAIKLYGGNRNR |
Ga0310345_118908182 | 3300032278 | Seawater | VATPQDKIIEAQEAEILRLKTELSDTEAKLSKMRKKLDDMAIKLYGGGPN |
Ga0310345_123296381 | 3300032278 | Seawater | VATPQDNIIETLEAEIVRLKAQLSDTEDRLSKMKEKNDEMAIKLYGG |
Ga0315334_110442303 | 3300032360 | Seawater | KVDIFITVTTPQNKIIEALEAEVTRLKTQLSDTEDRLSKMREKFDDMAIKLYGGGRN |
Ga0310342_1013659352 | 3300032820 | Seawater | VATPQDNIIETLEAEIVRLKAQLSDTEDRLSKMKEKNDEMAIKLYGGRRT |
Ga0310342_1023928823 | 3300032820 | Seawater | VATPQDNIIETLEAEIVRLKAQLSNTEDRLSKMQEKINEMAIKLYGGRRNL |
Ga0310342_1028217302 | 3300032820 | Seawater | VATPQNNIIEALEAEIIRLKTELTHTKDKLSEMREKFDELYVILRET |
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