Metagenome / Metatranscriptome Family F068786

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068786
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	65 residues
Representative Sequence	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLTDGKIVFYEVVE
Number of Associated Samples	93
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	40.65 %
% of genes near scaffold ends (potentially truncated)	24.19 %
% of genes from short scaffolds (< 2000 bps)	83.87 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (92.742 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.323 % of family members)
Environment Ontology (ENVO)	Unclassified (21.774 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.516 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.26% β-sheet: 36.96% Coil/Unstructured: 59.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain	d4hwsa1	4hws	0.59692
d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain	d1hc7a2	1hc7	0.58838
d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain	d12asa_	12as	0.58631
d.104.1.0: automated matches	d1x54a2	1x54	0.579
c.66.1.7: Protein-L-isoaspartyl O-methyltransferase	d1i1na_	1i1n	0.57031

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00072	Response_reg	2.42
PF14417	MEDS	1.61
PF09587	PGA_cap	1.61
PF13382	Adenine_deam_C	0.81
PF13847	Methyltransf_31	0.81
PF00296	Bac_luciferase	0.81
PF00211	Guanylate_cyc	0.81
PF02374	ArsA_ATPase	0.81
PF00571	CBS	0.81
PF12706	Lactamase_B_2	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.81
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.81

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.74 %
Unclassified	root	N/A	7.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.74 %
Unclassified	root	N/A	7.26 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	92.74 %
Unclassified	root	N/A	7.26 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	81.45 %
Unclassified	root	N/A	7.26 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	81.45 %
Unclassified	root	N/A	7.26 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	76.61 %
Unclassified	root	N/A	7.26 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	4.84 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	76.61 %
Unclassified	root	N/A	7.26 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	4.84 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	76.61 %
Unclassified	root	N/A	7.26 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	3.23 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	76.61 %
Unclassified	root	N/A	7.26 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1.61 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	1.61 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	76.61 %
Unclassified	root	N/A	7.26 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1.61 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9111716	All Organisms → cellular organisms → Archaea	2523	Open in IMG/M
3300000787\|JGI11643J11755_11758525	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	612	Open in IMG/M
3300000787\|JGI11643J11755_11798588	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	933	Open in IMG/M
3300003987\|Ga0055471_10018316	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1644	Open in IMG/M
3300003987\|Ga0055471_10055048	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1086	Open in IMG/M
3300003997\|Ga0055466_10133935	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	699	Open in IMG/M
3300004157\|Ga0062590_102266976	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	570	Open in IMG/M
3300004480\|Ga0062592_101697382	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	614	Open in IMG/M
3300004643\|Ga0062591_102348757	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	558	Open in IMG/M
3300005339\|Ga0070660_100995296	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	708	Open in IMG/M
3300006636\|Ga0075525_10030303	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1076	Open in IMG/M
3300006792\|Ga0075530_1256639	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	539	Open in IMG/M
3300006844\|Ga0075428_100349305	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1587	Open in IMG/M
3300006844\|Ga0075428_100366387	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1545	Open in IMG/M
3300006845\|Ga0075421_100618264	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1270	Open in IMG/M
3300006846\|Ga0075430_100283991	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1369	Open in IMG/M
3300006846\|Ga0075430_100999856	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	689	Open in IMG/M
3300006853\|Ga0075420_100062955	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	3288	Open in IMG/M
3300006876\|Ga0079217_10024682	All Organisms → cellular organisms → Archaea	2165	Open in IMG/M
3300006876\|Ga0079217_10058492	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1580	Open in IMG/M
3300006876\|Ga0079217_11363704	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	552	Open in IMG/M
3300006880\|Ga0075429_100789507	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	832	Open in IMG/M
3300006894\|Ga0079215_10073673	All Organisms → cellular organisms → Archaea	1415	Open in IMG/M
3300006894\|Ga0079215_10227359	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	969	Open in IMG/M
3300006894\|Ga0079215_10637591	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	704	Open in IMG/M
3300006918\|Ga0079216_10430396	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	842	Open in IMG/M
3300006918\|Ga0079216_11898918	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	514	Open in IMG/M
3300007004\|Ga0079218_11118125	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	806	Open in IMG/M
3300007004\|Ga0079218_11340377	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	758	Open in IMG/M
3300009081\|Ga0105098_10160260	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1016	Open in IMG/M
3300009094\|Ga0111539_10007422	All Organisms → cellular organisms → Archaea	14050	Open in IMG/M
3300009100\|Ga0075418_10122348	Not Available	2765	Open in IMG/M
3300009146\|Ga0105091_10075570	All Organisms → cellular organisms → Archaea	1521	Open in IMG/M
3300009146\|Ga0105091_10366744	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	712	Open in IMG/M
3300009147\|Ga0114129_12589497	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	605	Open in IMG/M
3300009147\|Ga0114129_13426869	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	509	Open in IMG/M
3300009157\|Ga0105092_10097631	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	1609	Open in IMG/M
3300009157\|Ga0105092_10195794	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1128	Open in IMG/M
3300009168\|Ga0105104_10044427	All Organisms → cellular organisms → Archaea	2437	Open in IMG/M
3300009789\|Ga0126307_10042618	All Organisms → cellular organisms → Archaea	3528	Open in IMG/M
3300009840\|Ga0126313_10015199	All Organisms → cellular organisms → Archaea	4995	Open in IMG/M
3300009840\|Ga0126313_10095445	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	2178	Open in IMG/M
3300010039\|Ga0126309_10045535	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	2074	Open in IMG/M
3300010039\|Ga0126309_11126605	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	535	Open in IMG/M
3300010041\|Ga0126312_10030196	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3620	Open in IMG/M
3300010045\|Ga0126311_11792329	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	520	Open in IMG/M
3300010137\|Ga0126323_1132237	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	549	Open in IMG/M
3300010152\|Ga0126318_10754643	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	536	Open in IMG/M
3300010152\|Ga0126318_10881009	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	553	Open in IMG/M
3300011332\|Ga0126317_10281885	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	510	Open in IMG/M
3300011332\|Ga0126317_10587931	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	580	Open in IMG/M
3300011400\|Ga0137312_1028449	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	840	Open in IMG/M
3300012046\|Ga0136634_10106076	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1064	Open in IMG/M
3300012212\|Ga0150985_101950263	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	511	Open in IMG/M
3300012212\|Ga0150985_121832741	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	604	Open in IMG/M
3300012469\|Ga0150984_103891009	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	536	Open in IMG/M
3300012469\|Ga0150984_109277769	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	517	Open in IMG/M
3300012530\|Ga0136635_10073705	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1057	Open in IMG/M
3300012909\|Ga0157290_10346868	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	563	Open in IMG/M
3300013026\|Ga0170681_1025646	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1252	Open in IMG/M
3300013306\|Ga0163162_12741448	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	567	Open in IMG/M
3300013867\|Ga0181467_116881	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	654	Open in IMG/M
3300013872\|Ga0181463_1015628	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1079	Open in IMG/M
3300015374\|Ga0132255_103777423	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	643	Open in IMG/M
3300017695\|Ga0180121_10099974	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1043	Open in IMG/M
3300017787\|Ga0183260_10244025	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1241	Open in IMG/M
3300017789\|Ga0136617_10166140	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1876	Open in IMG/M
3300018072\|Ga0184635_10391452	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	527	Open in IMG/M
3300018073\|Ga0184624_10031543	All Organisms → cellular organisms → Archaea	2051	Open in IMG/M
3300018073\|Ga0184624_10123916	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1121	Open in IMG/M
3300018432\|Ga0190275_10121208	All Organisms → cellular organisms → Archaea	2358	Open in IMG/M
3300018432\|Ga0190275_13506869	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	508	Open in IMG/M
3300018465\|Ga0190269_10914835	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	650	Open in IMG/M
3300018465\|Ga0190269_11988160	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	505	Open in IMG/M
3300018466\|Ga0190268_10025719	All Organisms → cellular organisms → Archaea	2002	Open in IMG/M
3300018466\|Ga0190268_10034581	All Organisms → cellular organisms → Archaea	1836	Open in IMG/M
3300018466\|Ga0190268_11451473	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	592	Open in IMG/M
3300018469\|Ga0190270_10788860	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	955	Open in IMG/M
3300018476\|Ga0190274_10306589	Not Available	1482	Open in IMG/M
3300018481\|Ga0190271_10658927	Not Available	1168	Open in IMG/M
3300018481\|Ga0190271_10992032	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	964	Open in IMG/M
3300018920\|Ga0190273_10191465	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1270	Open in IMG/M
3300019356\|Ga0173481_10199675	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	866	Open in IMG/M
3300019767\|Ga0190267_10002903	All Organisms → cellular organisms → Archaea	4248	Open in IMG/M
3300019767\|Ga0190267_10648213	Not Available	666	Open in IMG/M
3300020020\|Ga0193738_1174501	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	553	Open in IMG/M
3300020065\|Ga0180113_1103884	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	534	Open in IMG/M
3300020154\|Ga0196965_1127386	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	658	Open in IMG/M
3300024430\|Ga0196962_10067662	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1088	Open in IMG/M
3300025537\|Ga0210061_1001387	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	3755	Open in IMG/M
3300025567\|Ga0210076_1003819	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	3560	Open in IMG/M
3300025582\|Ga0209386_1028875	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1025	Open in IMG/M
3300025791\|Ga0210115_1038964	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1034	Open in IMG/M
3300025908\|Ga0207643_11110096	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	510	Open in IMG/M
3300025961\|Ga0207712_11967894	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	523	Open in IMG/M
3300027075\|Ga0214467_1008824	Not Available	1018	Open in IMG/M
3300027075\|Ga0214467_1030561	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	608	Open in IMG/M
3300027360\|Ga0209969_1064308	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	581	Open in IMG/M
3300027639\|Ga0209387_1212543	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	536	Open in IMG/M
3300027647\|Ga0214468_1014760	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	2177	Open in IMG/M
3300027647\|Ga0214468_1173639	Not Available	538	Open in IMG/M
3300027675\|Ga0209077_1091433	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	841	Open in IMG/M
3300027691\|Ga0209485_1129378	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	737	Open in IMG/M
3300027691\|Ga0209485_1139370	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	717	Open in IMG/M
3300027743\|Ga0209593_10183030	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	743	Open in IMG/M
3300027880\|Ga0209481_10213640	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	966	Open in IMG/M
3300027907\|Ga0207428_10346762	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1093	Open in IMG/M
3300027909\|Ga0209382_10027214	Not Available	6902	Open in IMG/M
3300027909\|Ga0209382_11249407	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	756	Open in IMG/M
3300027956\|Ga0209820_1168843	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	607	Open in IMG/M
3300029695\|Ga0206087_1028518	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	617	Open in IMG/M
3300030609\|Ga0247634_10399406	Not Available	577	Open in IMG/M
3300031058\|Ga0308189_10285364	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	639	Open in IMG/M
3300031091\|Ga0308201_10088116	All Organisms → cellular organisms → Archaea	871	Open in IMG/M
3300031229\|Ga0299913_10357720	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1448	Open in IMG/M
3300031547\|Ga0310887_10799313	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	592	Open in IMG/M
3300031548\|Ga0307408_101597106	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	619	Open in IMG/M
3300031824\|Ga0307413_10522174	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	958	Open in IMG/M
3300031852\|Ga0307410_10171388	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1636	Open in IMG/M
3300031995\|Ga0307409_102846835	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	511	Open in IMG/M
3300032002\|Ga0307416_100849791	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1011	Open in IMG/M
3300032005\|Ga0307411_11118959	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	711	Open in IMG/M
3300034268\|Ga0372943_0700981	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.58%
Host-Associated	Host-Associated	25.81%
Engineered	Engineered	1.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.39%
Plants	Host-Associated → Plants	25.81%
Aquatic	Environmental → Aquatic	24.19%
Built Environment	Engineered → Built Environment	1.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.97%
Freshwater	Environmental → Aquatic → Freshwater	16.13%
Marine	Environmental → Aquatic → Marine	4.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.84%
Sediment	Environmental → Aquatic → Sediment	3.23%
Unclassified	Engineered → Built Environment → Unclassified	1.61%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.06%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.84%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	4.03%
Ice	Environmental → Aquatic → Freshwater → Ice	4.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.42%
Sand	Environmental → Terrestrial → Soil → Sand	1.61%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.06%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.03%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	4.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.61%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.61%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	1.61%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	10.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.26%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.84%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	4.03%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	4.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.42%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.61%
Clean Room	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300006636	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two	Environmental	Open in IMG/M
3300006792	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300013026	Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Cordon de Lila	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013867	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In5-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300013872	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In1-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020154	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025582	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300029695	Metatranscriptome of soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030609	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00983280	2088090015	Soil	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLTDGKIAFYEVVE
JGI11643J11755_117585252	3300000787	Soil	MSEKKADLVNSSEVKVMTEKGRDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE*
JGI11643J11755_117985882	3300000787	Soil	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLTDGKIAFYEVVE*
Ga0055471_100183162	3300003987	Natural And Restored Wetlands	MSEKKVDLVNSSEVQVMKEKEKDFIDIDVQRLEEGKYYRVEYEGDVYAVEKSTDDKIVFYEVVE*
Ga0055471_100550482	3300003987	Natural And Restored Wetlands	MSEKKVDLVNSSEVKVMKEKGRDFIDIDVNHLEEQKFYRVEYEGDVYAVEKSPDGKIVFYEVVE*
Ga0055466_101339351	3300003997	Natural And Restored Wetlands	MSEKKADLVNSSEVKVMTEKGRDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLSDGKIVFYEVVE*
Ga0062590_1022669761	3300004157	Soil	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLTNGKIVFYEVVE*
Ga0062592_1016973822	3300004480	Soil	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAVEKLTNGK
Ga0062591_1023487572	3300004643	Soil	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAVEKLTNGKIVFYEVVE*
Ga0070660_1009952962	3300005339	Corn Rhizosphere	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVKRLEEQKFYRVEYEGDVYAIEKLTNGKIVFYEVVE*
Ga0075525_100303033	3300006636	Arctic Peat Soil	VTSEKKVDLVNSPEVQVMKEKEKDFIDIDFKHLEEQKFYRVEYEGDVYAVEKLADGKIAFYEVVE*
Ga0075530_12566391	3300006792	Arctic Peat Soil	MSEKKADLVNSSEVKVMTEKGRDFIDIDINRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE*
Ga0075428_1003493051	3300006844	Populus Rhizosphere	MSEKKADLVNSSEVQVMKEKERDFINIDVQGLEEQKFYRVEYEGDLYAVEKLEDGKIVFYEVIE*
Ga0075428_1003663873	3300006844	Populus Rhizosphere	MSEKKTDLVNSSEVQVMTEKGRDFIDIDINRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE*
Ga0075421_1006182641	3300006845	Populus Rhizosphere	MSEKKADLVNSSEVKVMTEKGKDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE*
Ga0075430_1002839912	3300006846	Populus Rhizosphere	MSEKKADLVNSSEVQVMKEKERDFINIDVQGLEEQKFYRVEYEGDVYAVEKLEDGKIVFYEVIE*
Ga0075430_1009998563	3300006846	Populus Rhizosphere	SMSEKKADLVNSSEVKVMTEKGMDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE*
Ga0075420_1000629553	3300006853	Populus Rhizosphere	MSEKKVDLVNSSEVQVMKEKERDFINIDVQGLEEQKFYRVEYEGDLYAVEKLEDGKIVFYEVIE*
Ga0079217_100246824	3300006876	Agricultural Soil	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDQGKFYRVEYEGDVYAVEKLTDGKIVFYEVVE*
Ga0079217_100584924	3300006876	Agricultural Soil	VSEKKVDLVNSSEVQVMKEKEKDFIDIDVNRLEEAKFYRVEYEGDVYAVEKLADGKIAFYEVIE*
Ga0079217_113637042	3300006876	Agricultural Soil	MSSNISGNENTLEKKVDLVNSPEVQVMKEKEKDFIDIDLKHLDEGKFYRVEYEGDVYAVEKLTDGKIAFYEVVE*
Ga0075429_1007895073	3300006880	Populus Rhizosphere	SMSEKKADLVKTSEVKVMTEKGKDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE*
Ga0079215_100736733	3300006894	Agricultural Soil	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLTDGKIVFYEVVE*
Ga0079215_102273593	3300006894	Agricultural Soil	MSEKKVDLVNSSEVQVMKEKEKDFIDIDVNRLEEAKFYRVEYEGDVYAVEKLADGKIAFYEVVE*
Ga0079215_106375911	3300006894	Agricultural Soil	MSEKKVDLVNSSEVQVMKEKEKDFIDIDVNRLEEAKFYRVEYEGDVYAVEKLADGKIAF
Ga0079216_104303961	3300006918	Agricultural Soil	MSEKKADLVNSSEVKVMKEKGMDFIDIDVNRLQEQKFYRVEYEGDVYVVEKSADGKIVFYEVVE*
Ga0079216_118989181	3300006918	Agricultural Soil	MSSNISGNENTLEKKVDLINSPEVQVMKEKEKDFIDIDLKHLDEGKFYRVEYEGDVYAVEKLTDGKIAFYEVVE
Ga0079218_111181251	3300007004	Agricultural Soil	SSEVKVMKEKGMDFIDIDVNRLEEQKFYRVEYEGDVYVVEKSADGKIVFYEVVE*
Ga0079218_113403772	3300007004	Agricultural Soil	MSSNISGNENTLEKKVDLVNSPEVQVMKEKEKDFIDIDLKHLDEGKFYRVEYEGDVYAVEKLTDGKI
Ga0105098_101602602	3300009081	Freshwater Sediment	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLTDGKITFYEVVE*
Ga0111539_1000742214	3300009094	Populus Rhizosphere	MSEKKADLVNSSEVQVMKEKERDFINIDVQVLEEQKFYRVEYEGDLYAVEKLEDGKIVFYEVIE*
Ga0075418_101223483	3300009100	Populus Rhizosphere	MSEKKADLVNSSEVQVMKEKERDFINIDVQGLEEQKFYRVEYEGDHYAVEKLEDGKIVFYEVIE*
Ga0105091_100755702	3300009146	Freshwater Sediment	MSSNISGNENTLEKKVDLINSPEVQVMKEKEKDFMDIDLKHLEEGKFYRVEYEGDVYAVEKLTDGKIAFYEVVE*
Ga0105091_103667442	3300009146	Freshwater Sediment	MSEKKADLVNSSEVKVMTEKGMDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE*
Ga0114129_123267052	3300009147	Populus Rhizosphere	VQVMKEKERDFINIDVQGLEEQKFYRVEYEGDLYAVEKLEDGKIVFYEVIE*
Ga0114129_125894971	3300009147	Populus Rhizosphere	MSEKKADLVKTSEVKVMTEKGKDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVV
Ga0114129_134268691	3300009147	Populus Rhizosphere	VSERKVDLVNSSEVQVMKEKGRDFIDIDVNSLEEQKFYRVEYEGDVYAVEKLTNGKIVFYEVIE*
Ga0105092_100976313	3300009157	Freshwater Sediment	SPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLTDGKIAFYEVVE*
Ga0105092_101957942	3300009157	Freshwater Sediment	MSEKKADLVNSSEVKVMTEKGRDFIDIDVSRLQEQKFYRVEYEGDVYAVEKLSDGKIVFYEVVE*
Ga0105104_100444273	3300009168	Freshwater Sediment	MSEKKADLVNSSEVKVMTEKGRDFIDIDVNRLQEQKFYRVEYEGDIYAVEKLPDGKLVFYEVVE*
Ga0126307_100426182	3300009789	Serpentine Soil	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLSDDKIVFYEVVE*
Ga0126313_100151997	3300009840	Serpentine Soil	MSEKKVDLVNSSEVQIMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLTDGKIVFYEVVE*
Ga0126313_100954454	3300009840	Serpentine Soil	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLSDGKIVFYEVVE*
Ga0126309_100455351	3300010039	Serpentine Soil	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLTDGKIVFYEVVE*
Ga0126309_111266051	3300010039	Serpentine Soil	VQVMKEKEKDFIDIDFKRLEEQKFYRVEYEGDVYAVEKLADGKIAFYEVVE*
Ga0126312_100301965	3300010041	Serpentine Soil	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNSLEEQKFYRVEYEGDVYAIEKLSDDKIVFYEVVE*
Ga0126311_117923292	3300010045	Serpentine Soil	LTSEKKVDLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLADGKIAFYEVVE*
Ga0126323_11322372	3300010137	Soil	SERKVDLVNSPEVQIMKDGEKDFINIDFKNLEKGKYYRVEYEGDVYGVEKQDDSKIAIYEVVE*
Ga0126318_107546432	3300010152	Soil	KKVDLVNSPEVQIMKDGQKDFINIDYRNLEKGKYYRVEYEGDVYGIEKQGESKIVFYEVVE*
Ga0126318_108810091	3300010152	Soil	KKVDLVNSPEVQIMKDEQKDFINIDFKNLEKGKYYRVEYEGDVYGIEKQDNGKIALYEVVE*
Ga0126317_102818852	3300011332	Soil	SSEVQVMKEKGRDFIDIDVNHLEEQKFYRVEYEGDVYAIEKTNGKIVFYEVVE*
Ga0126317_105879311	3300011332	Soil	DLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLSDDKIVFYEVVE*
Ga0137312_10284491	3300011400	Soil	LTSEKKVDLVNSPEVQVMKEKEKDFIDIDLKHLELGKYYRVEYEGDVYGVEKLDDGKIAFYEVV
Ga0136634_101060762	3300012046	Polar Desert Sand	MSTDASEKIVDLVNSPEVQIMKEGEKDFIDIDFKNLEKGKFYRVEYEGDVYGVEKQDDGKIAYYEVVE*
Ga0150985_1019502631	3300012212	Avena Fatua Rhizosphere	VDLVDSSVVQIMKDGQKDFINIDLKNLEKEKYYRVEYEGDVYGVEKQDDGKMVIYELVG*
Ga0150985_1218327412	3300012212	Avena Fatua Rhizosphere	SSSSDEKKVDLVDSKEVQIMKDGKKDFINIDFKNLEKGKYYRVEYEGDVYGVEKQNDSKISIYEVVE*
Ga0150984_1038910092	3300012469	Avena Fatua Rhizosphere	LPISSSSDKKVDLVNSSEVQIMKDREKDFINIDFKKLEKGKYYRVEYEGDVYGVEKQDNGKIAIYEVVE*
Ga0150984_1092777692	3300012469	Avena Fatua Rhizosphere	SSSSERKVDLVNSPEVQIMKDGEKDFINIDFKNLEKGKYYRVEYEGDVYGVEKQDDSKIAIYEVVE*
Ga0136635_100737052	3300012530	Polar Desert Sand	MSTDTSEKIVDLVNEPEVQIMKEGEKDFIKVEIKNLQEGKFYRVEYEGDVYGIEKQDDGKIILYEVVE*
Ga0157290_103468681	3300012909	Soil	EVNVMTEKKDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0170681_10256462	3300013026	Rock	MSTTDTSEKTVDLVNSPEVQIMKEGEKDFIDIDIKNLEKGKFYRVEYEGDVYGIEKQDDGKIAYYEVVE*
Ga0163162_127414481	3300013306	Switchgrass Rhizosphere	MSEKNVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAVEKLTNGKIVFYEVVE*
Ga0181467_1168811	3300013867	Clean Room	MSEKKSDLVNSSEVKVMTEKGKDFIDIDVNRLQEEKFYRVEYEGDVYAVEKLPDGKIVFYEVVE*
Ga0181463_10156282	3300013872	Clean Room	MSTDTSEKKVDLVDSPEVRIMKDDQRDFINIDLKNLEKGKFYRVEYEGDVYSVEKQDNGKIAFYEVVE*
Ga0132255_1037774231	3300015374	Arabidopsis Rhizosphere	MSEKKVDLVNSSEVQIMKEKGRDFIDIDVNSLEEQKFYRVEYEGDVYAVEKLTNGKIVFYEVIE*
Ga0180121_100999741	3300017695	Polar Desert Sand	MSTDTSEKIVDLVNEPEVQIMKEGEKDFIKVEIKNLQEGKFYRVEYEGDVYGIEKQDDGKIILYEVVE
Ga0183260_102440252	3300017787	Polar Desert Sand	MDMSTDTSEKTVDLVNSPEVQILKEGEKDFIDIDFKNLEKGKFYRVEYEGDVYGVEKQDDGKIAYYEVVE
Ga0136617_101661402	3300017789	Polar Desert Sand	MSTDTSEKTVDLVNSPEVQILKEGEKDFIDIDFKNMQKGKFYRVEYEGDVYGVEKQDDGKIAYYEVVE
Ga0184635_103914522	3300018072	Groundwater Sediment	MSEKKSDLVNSSEVKVMTEKGRDFIDIDVNRLQDQKFYRVEYEGDVYAVEKLSDEK
Ga0184624_100315433	3300018073	Groundwater Sediment	MSEKKADLVNSSEVKIMTEKGRDFIDIDVKRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0184624_101239163	3300018073	Groundwater Sediment	LTSEKKVDLVNSPEVQVMKEKEKDFIDIDFKRLEEQKFYRVEYEGDVYAVEKLADGKIAFYEVVE
Ga0190275_101212084	3300018432	Soil	MSEKKADLVNSSEVKVMTEKGRDFIDIDVSRLQEQKFYRVEYEGDVYAVEKLSDGKIVFYEVVE
Ga0190275_135068691	3300018432	Soil	MSTDTSEKIVDLVNEPEVQIMKEGEKDFINVEIRNLQEGKFYRVEYEGDVYGIEKQDDGKIILYEVVE
Ga0190269_109148351	3300018465	Soil	MSEKKADLVNSSEVKVMTEKGRDFIDIDVNRLQDQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0190269_119881601	3300018465	Soil	MSTDTSEKIVDLVNEPEVQIMKEGEKDFINVEIRNLQEGKFYRVEYEGDVYGIEKQEDGKIMLYEVVE
Ga0190268_100257193	3300018466	Soil	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKHLDEGKFYRVEYEGDVYAVEKLTDGKIAFYEVVE
Ga0190268_100345813	3300018466	Soil	MSTDTSEKIVDLVNEPGVQIMKEGEKDFINVEIRNLQEGKFYRVEYEGDVYGIEKQDDGKIILYEVVE
Ga0190268_114514731	3300018466	Soil	LTSEKKVDLINSPEVQVMKEKEKDFIDIDFKRLEEQKFYRVEYEGDVYAVEKLADGKIAFYEVVE
Ga0190270_107888601	3300018469	Soil	MSEKKADLVNSSEVKVMTEKGRDFIDIDVNRLQEQKFYRVEYDGDVYAIEKLSDGKIVFYEVVE
Ga0190274_103065892	3300018476	Soil	MSEKKADLVNSSEVKVMTEKGRDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0190271_106589272	3300018481	Soil	MSEKKTDLVNSSEVKVMTEKGKDFIDIDVNRLQEQKFYRVEYEGDVYALEKLPDGKIVFYEVVE
Ga0190271_109920323	3300018481	Soil	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLTDGKIVFYEVVE
Ga0190273_101914652	3300018920	Soil	MSTDTSEKIVDLVNEPEVQIMKEGEKDFINVEIRDLQEGKFYRVEYEGDVYGIEKQDDGKIILYEVVE
Ga0173481_101996751	3300019356	Soil	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAVEKLTNGKIVFYEVVE
Ga0190267_100029033	3300019767	Soil	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYGVEKLTDGKIAFYEVVE
Ga0190267_106482131	3300019767	Soil	LVNSSEVKVMTEKGRDFIDIDVNRLQEQKFSRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0193738_11745012	3300020020	Soil	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLADGKIAFYEVVE
Ga0180113_11038842	3300020065	Groundwater Sediment	VDLVNSPEVQVMKEKEKDFIDIDFKRLEEQKFYRVEYEGDVYAVEKLADGKIAFYEVVE
Ga0196965_11273862	3300020154	Soil	NVSGKKVDLVNSSEVQVMKEKEKDFIDIDVNRLEEAKFYRVEYEGDVYAVEKLADGKIAFYEVVE
Ga0196962_100676621	3300024430	Soil	VSEKKVDLVNSSEVQVMKEKEKDFIDIDVNRLEEAKFYRVEYEGDVYAVEKLADGKIAFYEVVE
Ga0210061_10013873	3300025537	Natural And Restored Wetlands	MSEKKVDLVNSSEVQVMKEKEKDFIDIDVQRLEEGKYYRVEYEGDVYAVEKSTDDKIVFYEVVE
Ga0210076_10038194	3300025567	Natural And Restored Wetlands	MSEKKVDLVNSSEVQVMKEKEKNFIDIDVQRLEEGKYYRVEYEGDVYAVEKSTDDKIVFYEVVE
Ga0209386_10288752	3300025582	Arctic Peat Soil	VTSEKKVDLVNSPEVQVMKEKEKDFIDIDFKHLEEQKFYRVEYEGDVYAVEKLADGKIAFYEVVE
Ga0210115_10389642	3300025791	Natural And Restored Wetlands	MSEKKVDLVNSSEVKVMKEKGRDFIDIDVNHLEEQKFYRVEYEGDVYAVEKSPDGKIVFYEVVE
Ga0207643_111100962	3300025908	Miscanthus Rhizosphere	MLSNTYIQMSSDNSKKTVDLVNESAVQILKEGQQDFINIDIKNLQENKFYRVEYEGDVYAVEKQSDDRLFLYEVVE
Ga0207712_119678941	3300025961	Switchgrass Rhizosphere	MSEKNVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLTNGKIVFYEVVE
Ga0214467_10088243	3300027075	Soil	MSEKKADLVNSSEVKVMTEKGRDFIDIDVNRLQEQNFYQVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0214467_10305611	3300027075	Soil	MSILHMSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLTDGKITFYEV
Ga0209969_10643082	3300027360	Arabidopsis Thaliana Rhizosphere	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0209387_12125432	3300027639	Agricultural Soil	MSEKKVDLVNSSEVQVMKEKEKDFIDIDVNRLEEAKFYRVEYEGDVYAVEKLADGKIAFYEVVE
Ga0214468_10147603	3300027647	Soil	MSSNISGNENTLEKKVDLVNSPEVQVMKEKEKDFIDIDLKHLEEEKFYRVEYEGDVYAIEKLTDGKIAFYEVVE
Ga0214468_11736391	3300027647	Soil	MSEKKADLVNSSEVKVMTEKGMDFIDIDVNRLQEQKCYRVEYEGDVYAVEKLSDGKIVFYEVVE
Ga0209077_10914331	3300027675	Freshwater Sediment	MSEKKADLVNSSEVKVMTEKGMDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0209485_11293781	3300027691	Agricultural Soil	MSEKKADLVNSSEVKVMKEKGMDFIDIDVNRLQEQKFYRVEYEGDVYVVEKSADGKIVFYEVVE
Ga0209485_11393702	3300027691	Agricultural Soil	MSSNISGNENTLEKKVDLVNSPEVQVMKEKEKDFIDIDLKHLDEGKFYRVEYEGDVYAVEKLTDGKIAFYEVVE
Ga0209593_101830301	3300027743	Freshwater Sediment	MSEKKADLVNSSEVKVMTEKGRDFIDIDVNRLQEQKFYRVEYEGDIYAVEKLPDGKLVFYEVVE
Ga0209481_102136402	3300027880	Populus Rhizosphere	MSEKKADLVNSSEVQVMKEKERDFINIDVQGLEEQKFYRVEYEGDLYAVEKLEDGKIVFYEVIE
Ga0207428_103467622	3300027907	Populus Rhizosphere	MSEKKVNLVNSSEVQVMKEKGRDFIDIDVNSLEEQKFYRVEYEGDVYAVEKLTNGKIVFYEVIE
Ga0209382_100272148	3300027909	Populus Rhizosphere	MSEKKTDLVNSSEVQVMTEKGRDFIDIDINRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0209382_112494072	3300027909	Populus Rhizosphere	MSEKKADLVNSSEVQVMKEKERDFINIDVQGLEEQKFYRVEYEGDVYAVEKLEDGKIVFYEVIE
Ga0209820_11688432	3300027956	Freshwater Sediment	MSSNISGNENTLEKKADLVNSPEVQVMKEKEKDFIDIDLKNLDEGKFYRVEYEGDVYAVEKLTDGKITFYEVVE
Ga0206087_10285182	3300029695	Soil	LVNSSEVQVMKEEGRDFIDIDVNRLEEQKFYRVEYEGDVYAVEKLADGKIVFYEVVE
Ga0247634_103994061	3300030609	Soil	VNSSEVKVMKEKGMDFIDIDDNRLEEQKIYRVEYEGDVYAVEKLADGKIVFYEVVE
Ga0308189_102853642	3300031058	Soil	DNSKKTVDLVNESAVQILKEGQQDFINIDIKNLQENKFYRVEYEGDVYAVEKQSDDKLFLYEVVE
Ga0308201_100881161	3300031091	Soil	KIVDLTDSPAVQILNEGETDFIDIDIKNLDVGKFYRVEYEGDVYGVEKQDNGKIAFYEVV
Ga0299913_103577203	3300031229	Soil	MSEKKADLVNSSEVKVMTEKGKDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0310887_107993132	3300031547	Soil	MSEKKADLVKTSEVKVMTEKGKDFIDIDVNRLQEQKFYRVEYEGDVYAVEKLPDGKIVFYEVVE
Ga0307408_1015971062	3300031548	Rhizosphere	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLTDGKIVFYEVVE
Ga0307413_105221742	3300031824	Rhizosphere	MSEKKVDLVNSSEVQVMKEKERDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLSDDKIVFYEVVE
Ga0307410_101713883	3300031852	Rhizosphere	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLSDDKIVFYEVVE
Ga0307409_1028468351	3300031995	Rhizosphere	MSEKKVDLVNSSEVQIMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLSDDKIVFYEVVE
Ga0307416_1008497911	3300032002	Rhizosphere	LVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLSDGKIVFYEVVE
Ga0307411_111189592	3300032005	Rhizosphere	MSEKKVDLVNSSEVQVMKEKGRDFIDIDVNRLEEQKFYRVEYEGDVYAIEKLIDGKIVFYEVIE
Ga0372943_0700981_69_275	3300034268	Soil	MSTDTSEKKVDLVNSPEVQIMIDGQKDFINIDYRNLEKGKYYRVEYEGDVYGIEKQGESKIVFYEVVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068786

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences