Metagenome Family F068677

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068677
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	105 residues
Representative Sequence	MAVADSRDLSETRSVPGLQHHFVQLRRRVEGIPSQGVAAKHIIAMKFSTEAIVAAAVAVVFALLSFGAIAREQGQGPARGGHNAYIAASNVNLSQVATSDTDVLGFY
Number of Associated Samples	112
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.34 %
% of genes near scaffold ends (potentially truncated)	29.03 %
% of genes from short scaffolds (< 2000 bps)	88.71 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.194 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (9.677 % of family members)
Environment Ontology (ENVO)	Unclassified (16.935 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.194 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.85% β-sheet: 0.00% Coil/Unstructured: 48.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF04542	Sigma70_r2	16.94
PF00583	Acetyltransf_1	5.65
PF00069	Pkinase	3.23
PF13508	Acetyltransf_7	2.42
PF00392	GntR	1.61
PF13673	Acetyltransf_10	0.81
PF08327	AHSA1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	16.94
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	16.94
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	16.94
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	16.94
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	12.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	96.77 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	96.77 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	88.71 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.23 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.71 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.42 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.71 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.42 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.71 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.42 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.71 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2.42 %
Unclassified	root	N/A	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17322046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1358	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10000029	All Organisms → cellular organisms → Bacteria	19962	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1041794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300000890\|JGI11643J12802_12004597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300002128\|JGI24036J26619_10026789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1084	Open in IMG/M
3300002568\|C688J35102_120739624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1457	Open in IMG/M
3300002899\|JGIcombinedJ43975_10049891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300002903\|JGI24801J43971_1009522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300004081\|Ga0063454_101731685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300004114\|Ga0062593_102771686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300004156\|Ga0062589_100651270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	925	Open in IMG/M
3300004156\|Ga0062589_101394900	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300004157\|Ga0062590_100374411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1153	Open in IMG/M
3300004479\|Ga0062595_101212556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300004480\|Ga0062592_100525134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	985	Open in IMG/M
3300005093\|Ga0062594_100593944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	968	Open in IMG/M
3300005093\|Ga0062594_101696736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	660	Open in IMG/M
3300005171\|Ga0066677_10412116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300005175\|Ga0066673_10060541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1937	Open in IMG/M
3300005179\|Ga0066684_10078589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1971	Open in IMG/M
3300005294\|Ga0065705_11129773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300005295\|Ga0065707_10028527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	974	Open in IMG/M
3300005332\|Ga0066388_101868969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1071	Open in IMG/M
3300005345\|Ga0070692_10930699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300005367\|Ga0070667_100235987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1632	Open in IMG/M
3300005436\|Ga0070713_100387765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1303	Open in IMG/M
3300005450\|Ga0066682_10967351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300005574\|Ga0066694_10248467	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300005587\|Ga0066654_10075136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1569	Open in IMG/M
3300005764\|Ga0066903_100415340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2224	Open in IMG/M
3300005764\|Ga0066903_101230943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1393	Open in IMG/M
3300005764\|Ga0066903_102216903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1060	Open in IMG/M
3300005764\|Ga0066903_105488121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300005764\|Ga0066903_107077097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300005937\|Ga0081455_10043325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3938	Open in IMG/M
3300006028\|Ga0070717_10288707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1456	Open in IMG/M
3300006028\|Ga0070717_12136249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300006791\|Ga0066653_10296151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300006797\|Ga0066659_10546038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	935	Open in IMG/M
3300006844\|Ga0075428_102692782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300006852\|Ga0075433_11014367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	723	Open in IMG/M
3300006854\|Ga0075425_102827768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300009012\|Ga0066710_101296853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1129	Open in IMG/M
3300009553\|Ga0105249_10291338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1634	Open in IMG/M
3300010046\|Ga0126384_10261200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1405	Open in IMG/M
3300010325\|Ga0134064_10049558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1285	Open in IMG/M
3300010360\|Ga0126372_10684872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	998	Open in IMG/M
3300010366\|Ga0126379_11690771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300010366\|Ga0126379_13125052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300010399\|Ga0134127_13440570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300012200\|Ga0137382_10216114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1321	Open in IMG/M
3300012204\|Ga0137374_10012729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9790	Open in IMG/M
3300012208\|Ga0137376_10031609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4208	Open in IMG/M
3300012892\|Ga0157294_10299722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300012917\|Ga0137395_10263638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1213	Open in IMG/M
3300012925\|Ga0137419_10189405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1515	Open in IMG/M
3300012971\|Ga0126369_10558847	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300012986\|Ga0164304_10864750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300012987\|Ga0164307_11793690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012989\|Ga0164305_10481819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	971	Open in IMG/M
3300014150\|Ga0134081_10036863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1432	Open in IMG/M
3300014166\|Ga0134079_10288692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300015357\|Ga0134072_10011733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2046	Open in IMG/M
3300015371\|Ga0132258_10481604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3099	Open in IMG/M
3300015373\|Ga0132257_100830110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1155	Open in IMG/M
3300015373\|Ga0132257_102712989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300015374\|Ga0132255_101864356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	914	Open in IMG/M
3300016387\|Ga0182040_11938414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300018000\|Ga0184604_10144498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	779	Open in IMG/M
3300018028\|Ga0184608_10015700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2669	Open in IMG/M
3300018051\|Ga0184620_10330148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300018052\|Ga0184638_1110702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1006	Open in IMG/M
3300018053\|Ga0184626_10192513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	865	Open in IMG/M
3300018081\|Ga0184625_10123003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1349	Open in IMG/M
3300018081\|Ga0184625_10198002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1053	Open in IMG/M
3300018433\|Ga0066667_10189790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1498	Open in IMG/M
3300018468\|Ga0066662_11416850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300018482\|Ga0066669_10907631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300019867\|Ga0193704_1030541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1088	Open in IMG/M
3300019878\|Ga0193715_1003093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3622	Open in IMG/M
3300019883\|Ga0193725_1007241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3182	Open in IMG/M
3300021475\|Ga0210392_10575454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300021560\|Ga0126371_11690379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300022534\|Ga0224452_1051945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1218	Open in IMG/M
3300022694\|Ga0222623_10016879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2702	Open in IMG/M
3300022756\|Ga0222622_10414455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	950	Open in IMG/M
3300023058\|Ga0193714_1017622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1065	Open in IMG/M
3300023066\|Ga0247793_1076498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300024186\|Ga0247688_1073885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300025271\|Ga0207666_1018578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1010	Open in IMG/M
3300025315\|Ga0207697_10178506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	930	Open in IMG/M
3300025915\|Ga0207693_10147649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1849	Open in IMG/M
3300025928\|Ga0207700_10367956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1255	Open in IMG/M
3300025929\|Ga0207664_10273854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1479	Open in IMG/M
3300025961\|Ga0207712_10176625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1674	Open in IMG/M
3300025986\|Ga0207658_10727493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	898	Open in IMG/M
3300026316\|Ga0209155_1035337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2005	Open in IMG/M
3300026323\|Ga0209472_1203047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300026332\|Ga0209803_1356941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300026523\|Ga0209808_1046439	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2007	Open in IMG/M
3300026685\|Ga0208706_101111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300028711\|Ga0307293_10285368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300031170\|Ga0307498_10054661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1095	Open in IMG/M
3300031170\|Ga0307498_10208698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300031446\|Ga0170820_10354068	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300031474\|Ga0170818_113660288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1162	Open in IMG/M
3300031474\|Ga0170818_115396667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	949	Open in IMG/M
3300031538\|Ga0310888_10106174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1437	Open in IMG/M
3300031545\|Ga0318541_10181945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1161	Open in IMG/M
3300031547\|Ga0310887_11065496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300031562\|Ga0310886_10750258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300031720\|Ga0307469_10487703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1077	Open in IMG/M
3300031740\|Ga0307468_101038526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300031820\|Ga0307473_10394566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	905	Open in IMG/M
3300031833\|Ga0310917_10119094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1717	Open in IMG/M
3300031908\|Ga0310900_10185430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1447	Open in IMG/M
3300031910\|Ga0306923_10562122	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300031945\|Ga0310913_10127574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1742	Open in IMG/M
3300032017\|Ga0310899_10652566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300032035\|Ga0310911_10509161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300032059\|Ga0318533_11229428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300032174\|Ga0307470_10263770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1146	Open in IMG/M
3300034354\|Ga0364943_0202681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.52%
Host-Associated	Host-Associated	10.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.45%
Plants	Host-Associated → Plants	10.48%
Aquatic	Environmental → Aquatic	8.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.65%
Sediment	Environmental → Aquatic → Sediment	8.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.84%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.32%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002903	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um Nextera	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026685	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN349 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02144620	2088090014	Soil	MAVANPRYLSETRSVPGLQHNFLQLRRRMEGIPSQGVTAKHIITMKFSTEAIVAFAIAVVFVLMSFGAIVRERGQGPARGAHNVYIAASNVNLSQVSTSNTDVLGFY
AF_2010_repII_A1DRAFT_1000002917	3300000597	Forest Soil	MDVADARDLSETRSVPGLQYHLFQLWRRMEGVPSEGVAAKHIIAMKFSTEAIVALAVAVVFALLSFGAIAREQGQRPARSEHNGYVAASNVNLSQVAASETDVLGFY*
AP72_2010_repI_A100DRAFT_10417942	3300000837	Forest Soil	MAVADSRDLSQTRSVPGLQHGFLQLRRRMEGIPSQGVTAKHIIAMKFSTEAIVALAVAVVFALLSFGAIAREQEQRPATTGQNTYIAASNVT
JGI11643J12802_120045972	3300000890	Soil	MAVANPRYLSETRSVPGLQHNFLQLRRRMEGIPSQGVTAKHIITMKFSTEAIVAFAIAVVFVLMSFGAIVRERGQGPARGAHNVYIAASNVNLSQVSTSNTDVLGFY*
JGI24036J26619_100267891	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MADADSRHLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAVSDVNLSRVAPSQTDILGFY*
C688J35102_1207396241	3300002568	Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIVAGNVNLSRVAPSQTDAFGFY*
JGIcombinedJ43975_100498912	3300002899	Soil	MAVADSCDLSETRSVPGLQHNFVQLWWRVEGIPSQGVAAKHIITMKFSTEAIVAVAVAVVFALLSLGAIAREQGQEPARSGHKAYIAASNVHLSQVAASETD
JGI24801J43971_10095221	3300002903	Soil	MAVADSCDLSETRSVPGLQHNFVQLWWRVEGIPSQGVAAKHIITMKFSTEAIVAVAVAVVFALLSLGAIAREQGQEPARSGHKAYIAASNVHLSQVAAS
Ga0063454_1017316851	3300004081	Soil	MAVADARDLSETRSVPGLQHHFVQLRRWMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIVAGNVNLSRVAPSQTDVLGFY*
Ga0062593_1027716861	3300004114	Soil	MAVGDSRDLSETRSVPGLQHHFVQLRRRLEGISSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARSGHNASIAASSVSLSRVAASDMDVLGFY*
Ga0062589_1006512702	3300004156	Soil	MAVADSRDLSETRSVPGLQHGFLQLRRRMEGIPSQGVAAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPTNMDVHGFY*
Ga0062589_1013949002	3300004156	Soil	AVADSRDLSETRSVPGLQHHFVQLRRRLEGISSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARSGHNASIAASSVSLSRVAASDMDVLGFY*
Ga0062590_1003744112	3300004157	Soil	MAVADSCPLSETRSVPGLQHHFVQLRWGMEGIPSQGIAAKRLIVMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQAPAPGAHNSYIAANNVNFSQVATSDTDIPGVY*
Ga0062595_1012125561	3300004479	Soil	MAVADSCPLSETRSVPGLQHHFVQLRWGVEGIPSQGIAAKRLIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQAPARGGHNSYIAANNVNFSQVATSDTDIPGVY*
Ga0062592_1005251341	3300004480	Soil	MAVADSCPLSETRSVPGLQHHFVQLRWGMEGIPPQGIAAKRLIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQAPARGGHNSYIAANNVNFSQVATSDTDIPGVY*
Ga0062594_1005939441	3300005093	Soil	MAVADSRDLSETRSVPGLQHGFLQLRRRMEGIPSQGVAAKHVIAMKFSTESIVALSVAVVFALMSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPTNMDVHGFY*
Ga0062594_1016967361	3300005093	Soil	VAVADSCPLSETRSVPGLQHHFVQLRWGVEGIPSQGIAAKRLIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQAPARGGHNSYIAANNVNFSQVATSDTDIPGVY*
Ga0066677_104121162	3300005171	Soil	MAVADARDLSETRSVPGLQHHFVQLRRRVEGIPSEGVAAKHIIAMKFSTEAIVAMAVAVVFALLSFGAIAREQGQGPARSRHNTYITASNVNQSQVAASDTDVLGVY*
Ga0066673_100605413	3300005175	Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFALLSFGAIAREQGQGPARGHNAYIAAGTVNLSRVAPSPTDVLGFY*
Ga0066684_100785891	3300005179	Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIVAGNVNLSRVAPSQTDVLGFY*
Ga0066685_111094471	3300005180	Soil	AGRLSRKLGASVVRVFEGCRNPESVKGNQLAASIYEKPIEFHMAVADSRDLSETSASGLQHGFLQLRRRVEGIPSQGVAAKHIIAMKFSTEAIVAVAVAVVFALLSFGAIAREQGQGPARSGHNAYIAASNVNLSQVAASDTDVLGVY*
Ga0065705_111297731	3300005294	Switchgrass Rhizosphere	MAVADSRDLSETRSVPGLQHGILQLRRRMEGIPSQGVAAKHVIAMKFSTESIVALSVAVVFALMSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPTNMDVHGFY*
Ga0065707_100285272	3300005295	Switchgrass Rhizosphere	PEAAEGNQLAASIYEKPIEFCMAVADSRDLSETSVPGLQHGFLQLRRRVEGIPSQGVAAKHVVAMKFSTEAIVAAAVAMVFALLSFGAIAREQGQGPVRGGHNAYIAASNANLSQVAASDTDVLGVY*
Ga0066388_1018689692	3300005332	Tropical Forest Soil	MAVANSRDLSETRSVPGIQHNFVQLGRRMERIPSQGVTAKHIIAMRFSTEAIVALAVAVVFALLSFGAIAREQGQRPGDSGHKAYIAASNVSLSQVSPGNPDVLGYY*
Ga0070692_109306991	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MADADSRHLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGGHNAYIAESDVNLSRVAPSQTDILGF
Ga0070667_1002359872	3300005367	Switchgrass Rhizosphere	MADADSRHLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGGHNAYIAESDVNLSRVAPSQTDILGFY*
Ga0070713_1003877652	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAVADSRYLSETRPVAGLQHHLVQLRRRMERILSQGAAAKYVIAMKFSTEAIVALAVAVVFVLLSLGVIAREQGQGPARRMHNAYIANNANLSPVAASETDVLGFY*
Ga0066682_109673512	3300005450	Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVAVAVAVVFALLSFGAIAREQGEPARSGHNAYIAASNVNLNQVAASETD
Ga0066694_102484672	3300005574	Soil	MAVDDARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIVAGNVNLSRVAPSQTDVLGFY*
Ga0066654_100751363	3300005587	Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVAMAVAVVFALLSFGAIAREQGQGPARDRHNTYIAASNVNQSQVAASDTDVLGVY*
Ga0066903_1004153404	3300005764	Tropical Forest Soil	MAVADACDVSKTRSVSGLQYQLVQLWRRMEGIPSKGVAAKHIITMKFSTEAIVALAVAVVFALLSFGAIAREQEPARSAHNAYIAANSVAANNTDVLGVY*
Ga0066903_1012309434	3300005764	Tropical Forest Soil	MAVADSRDISETRSIPGLQHGFFQLRRRVEEIPSQGVAAKHIIAMKFSTEAIVAAAIAVVFVLLSFGAIAREQGQGPARNAHNAYVAASNVNLSQVAASKTDLLGFY*
Ga0066903_1022169031	3300005764	Tropical Forest Soil	MAVADSRDLSETRSVPGLQHGFLQLRRWMEGIPSQGVVAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPATTGQNTYIAAKNITLSHVAAGNPDVLGFY*
Ga0066903_1054881212	3300005764	Tropical Forest Soil	MAVANSCDLSETRSVSGLQHNFLQLRRRMEGIRSQGVAAKYIITMKFSTETIVALAVAVVFGLLSFGAITREQEQGPATTAQNTYIAASNVNLSQVAPTNTDVLGFY*
Ga0066903_1070770972	3300005764	Tropical Forest Soil	MAVANSRDLSETRSVPGIQHNFVQLGRWMERIPSQGVTTKHIIAMRFSTEAIVALAVAAVFALLSFGAIAREQGGQRPGDSGHNAYVAASNVNLTQVSPGNRDVLGFY*
Ga0081455_100433252	3300005937	Tabebuia Heterophylla Rhizosphere	MAIADLCDVSETRSVPGLQHRFFQFRRRVEGIPSQSLTAEQLIAMKFSTEAIVALAVAVVFALLSFGAIAREQGQGPVRGGHNTYIAASNVNLSQVAASKRDVLGFY*
Ga0070717_102887073	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAAADSRDVAQTRSVSGLQHGLLQLRRRMEGPPSEGVATKDVIPMTFSIEAIVAAVIAVVFALLSLGAIAREQGERPISGPNAYVATSNAHLTHVAAGENDAVGFYQTGR*
Ga0070717_121362492	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAVADSRYLSETRPVAGLQHHLVQLRRRMERILSQGAAAKYVIAMKFSTEAIVALAVAVVFVLLSLGVIAREEGQGPARRMHNAYIANNANLSPVAASETDVLGFY*
Ga0066653_102961512	3300006791	Soil	HLSNDEKSNEFCMAVADSCDVSETRSVPGLQHHFVQLRRRVEGIPSQGVAAKHIIAMKFSAEAIVALAVAVVFVLLSVGAIAREQGQGPARGHNAYIAAGTVNLSRVAPSPTDVLGFY*
Ga0066659_105460382	3300006797	Soil	CMAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARSRHNTYIAASNVNQSQVAASDTDVLGVY*
Ga0075428_1026927821	3300006844	Populus Rhizosphere	LQHGLLQLRRRMEGIPSKGVTAKHIITMKFSTEAIVASAVAVVFALLSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPANTHVLGFY*
Ga0075433_110143672	3300006852	Populus Rhizosphere	FCMAVADSRDPSQTRPVPSLQHHFVQLWRRVERIPSQGVAAKHIIAMKFSTEAIVAIAVAVVFVLLSFGAIAREQGEPGRGGHNAYIAASNVNLSQVAASETDFLGFY*
Ga0075425_1028277681	3300006854	Populus Rhizosphere	MAVADSRDLSQTRPVPGLQHGLLQLRRRMEGIPSKGVTAKHIITMKFSTEAMVASAVAVVFALLSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPANTHVLGFY*
Ga0066710_1012968532	3300009012	Grasslands Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVAVAVAVVFALLSFGAIAREQGEPARSGHNAYIAATSVNLSQVAASDTDVPGVY
Ga0105249_102913382	3300009553	Switchgrass Rhizosphere	MADADSRDLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAVSDVNLSRVAPSQTDILGFY*
Ga0126384_102612003	3300010046	Tropical Forest Soil	MAVADSRDISETRSIPGLQHGFVQLRRRGEGIPSQGIAAKHIIAMKFSTEAIVALAVAIVFALLSFGAIAREQGQGTARSGHKAYIAASNVNLSQAPASNTDVLGFY*
Ga0134064_100495583	3300010325	Grasslands Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFALLSFGAIAREQGQGPARGHNAYIAA
Ga0126372_106848722	3300010360	Tropical Forest Soil	MAVADSRDISETRSIPGLHHGFFQLRRRVEEIPSQGVAAKHIIAMKFSTEAIVAAAIAVVFVLLSFGAIAREQGQGPARNAHNAYVAASNVNLSQVAASKTDLLGFY*
Ga0126379_116907712	3300010366	Tropical Forest Soil	MAVANSRDLSETRSVPGLQHNFVQLGRWMERIPSQGVTTKHIIAMRFSTEAIVALAVAAVFALLSFGAIAREQGGQRPGDSGHNAYVAASNVNLTQVSPGNRDVLGFY*
Ga0126379_131250521	3300010366	Tropical Forest Soil	TEFCMAVANWCDISETRSVPGLQHGFVQLRRRVEGIPSQGIAAKHIIAMKFSTEAIVALAVAIVFALLSFGAIAREQGQGTARSGHKAYIAASNVNLSEVSPGNRDVLGYY*
Ga0134127_134405701	3300010399	Terrestrial Soil	LSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAVSDVNLSRVAPSQTDILGFY*
Ga0137382_102161143	3300012200	Vadose Zone Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPAPDRHNTYIAASNVNQSQVAASDTDVLGVY*
Ga0137374_100127293	3300012204	Vadose Zone Soil	MAVADSRDLSETRSVPGLQHHFVQLWRRVEGIPSQGVAAKHIIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQGPARGPHNASIAASNVSLSQVAASETDVLGFY*
Ga0137376_100316095	3300012208	Vadose Zone Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIAAGTVNLSRVAPSPTDVLGFY*
Ga0157294_102997221	3300012892	Soil	SVPGLQHDFVQLRRRMERIPTEGIAAKHVIAMKLSTEAIVALAVAVVFVLLSFGAIAREQGQQPAGAAHDAHIAANSVKLSQVAPSQTDVLGLY*
Ga0137395_102636382	3300012917	Vadose Zone Soil	SVPGLQHGFLELRRRVEGIPSEGVAANHIIAMKFSTEAIVAMAVAVVFALLSFGAIAREQGQGPARSRHNTYIAASNVNQSQVAASDTDVLGVY*
Ga0137419_101894052	3300012925	Vadose Zone Soil	LAVADSRNLSETRSVPGLQHSFLQLRRRVEGIPSEGVAAKHIIAMTCYTEAIVAMGVAVVYALLSFGAIAREQGQGPARSRHNTYIAASNVNQSQVAASDTDVLGVY*
Ga0126369_105588471	3300012971	Tropical Forest Soil	IEFCMAVADSRDISETRSIPGLQHGFFQLRRRVEEIPSQGVAAKHIIAMKFSTEAIVAAAIAVVFVLLSFGAIAREQGQGPARNAHNAYVAASNVNLSQVAASKTDLLGFY*
Ga0164304_108647501	3300012986	Soil	MADADSRDLSETRSVSGLQHYFVQLRRRMERIPSQGIAAKHIIVMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGGHNAYIAASNVNLSRVAPSQTDILGFY*
Ga0164307_117936901	3300012987	Soil	EFSMAVADARDLSETRSVPGLQYHFVQLWRRVERFPSQGVATKHVIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQRPARTGDNGYIAASNVNLSQVAAAETDVLGVY*
Ga0164305_104818191	3300012989	Soil	MAIADSRDLSETRSVPGLQHHFVQLRRRMEGIPSQGIAAKHIIVMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGGHNAYIAASNVNLSRVAPSQTDILGFY*
Ga0134081_100368631	3300014150	Grasslands Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARDRHNTYIAASNVNQSQVAPSDTDVLGVY*
Ga0134079_102886922	3300014166	Grasslands Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIAAGTVNLSRVAPRPTDVLGFY*
Ga0134072_100117331	3300015357	Grasslands Soil	MAVADSCDVSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIAAGTVNLSRVAPSPTDVLGFY*
Ga0132258_104816041	3300015371	Arabidopsis Rhizosphere	MADADSRDLSETRSILGLQHDFVQLRRRMERLPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSLGAIAREQEQGTARGGHNAYIAASNVNLSWVAPSQTDVLGFY*
Ga0132257_1008301102	3300015373	Arabidopsis Rhizosphere	MADADSRHLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAASNVNLSRVAPSQTDILGFY*
Ga0132257_1027129892	3300015373	Arabidopsis Rhizosphere	MADADSRDLSETRSILGLQHDFVQLRRRMERLPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQDPARGGHNAYIAASNANPSQVTASATNVLGVY*
Ga0132255_1018643562	3300015374	Arabidopsis Rhizosphere	MADADSRHLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAVSDVNLSRVAPSQTDVLGFY*
Ga0182040_119384141	3300016387	Soil	MAVANSRDLSEARSVSGLQHNFLQLRRWMEGIASQGIAAKYIIAMKFSTERTAASAAALILPRMSLRGAAPAQEQRPATTGQNTYIAANNITLSHVAAGNPDVLGFY
Ga0184604_101444981	3300018000	Groundwater Sediment	VAVADSCDLSETRSVLGLQHHFVQLWRRVEGIPSQGVAAKRVIAMKFSTEAIVAAAVAVVFVLLSFGAIAREQGQGPALSGHNAYIATSNVNPSQVAASNKDVLGVY
Ga0184608_100157002	3300018028	Groundwater Sediment	MAVADSRDLSETRSVPGLQHHFVQLRRRVEGIPSQGVAAKHIIAMKFSTEAIVAAAVAVVFALLSFGAIAREQGQGPARGGHNAYIAASNVNLSQVATSDTDVLGFY
Ga0184620_103301481	3300018051	Groundwater Sediment	MAVADSRDLSETRSVPGLQHHFVQLRRRVEGIPSQGVAAKHIIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQGPARGGHNVYIAANNVKLSRVAPSRTDV
Ga0184638_11107022	3300018052	Groundwater Sediment	MAVADSRDLSETRSVPGLQHHFVQLWRRVEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVVLSFGAIAREQGQGPARSGHNPYIAASNVNLSQVAASETDVLGFY
Ga0184626_101925132	3300018053	Groundwater Sediment	MAVADSRDVSETRSVPGLQHHFVQLRRGVEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVVLSFGAIAREQGQGPARGGNNASIAASNVNLSQVAASETDVLGFY
Ga0184625_101230033	3300018081	Groundwater Sediment	MAVADSRDLSETRSVPGLQYHFVQLGRWVERIPSQGVAAKHIIAMKFSTEAIVALAVTVVFVLLSFGAIAREQGQGPVRSGHNGYIAASNVSLSQVAASQTDVLGVY
Ga0184625_101980022	3300018081	Groundwater Sediment	SVPGLQHHFVQLWRRMEGIPSQGVAAKHIIAMKFSTEAIVAAAVALVFVLLSFGAIAREQGQGPARGGHNAHIAASNVNLSQVASSETDVLGFY
Ga0066667_101897902	3300018433	Grasslands Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGHNAYIVAGNVNLSRVAPSQTDVLGFY
Ga0066662_114168502	3300018468	Grasslands Soil	LQHGFLQLRRRVEGIPSEGVAAKHISAMKFSTEAIVAMAVAVVFALLSFGAIAREQGQGPARSRHNTYITASNVNQSQVAASDTDVLGVY
Ga0066669_109076311	3300018482	Grasslands Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIAAGTVNLSRV
Ga0193704_10305411	3300019867	Soil	MAVADARDLSETRSILGLQHDFVQLRRRMERIPSQGVAAKHIIAMKFSTEVIVALAVAVVFVLLSLGAIAREQGQEPARGGHNAYIAASNVNPSQVAANETDVLGFY
Ga0193715_10030931	3300019878	Soil	MAVADARDLSETRSIPGLQHDFVQLRRRMERIPSQGVAAKHIIAMKFSTEVIVALAVAVVFVLLSLGAIAREQGQEPARGGHNAYIAA
Ga0193725_10072413	3300019883	Soil	MAVADSRDLSETRSVPGLQHHFLQLRRRLERIPSQGLAAKHIIAMKFSTEAIVALAVAVVFILLSFGAIAREQGQGPARAGHNAHVAASNISLSQVAASETDVLGFY
Ga0210392_105754542	3300021475	Soil	MAVADSRYQSETRPVAGLQHHLVQLRRRMERILSQGAAAKYVIAMKFSTEAIVALAVAVVFVLLSLGVIAREQGQGPARRMHNAYIANNANLSPVAASETDVLGFY
Ga0126371_116903791	3300021560	Tropical Forest Soil	MAVADSRDLSETRSVPGLQHGFLQLRRWMEGIPSQGVVAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPATTGQNTYIAAKNITLSHVAAGNPDVLGFY
Ga0224452_10519452	3300022534	Groundwater Sediment	MAVADSRDLSETRSVPGLQHHFVQLRRRVEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGGNNASIAASNVNLSQVAASETDVLGFY
Ga0222623_100168793	3300022694	Groundwater Sediment	MAVADSRDLSETRSVPGLQHHFVQLRRRVEGIPSQGVAAKHIIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQGPARGGNNASIAASNVNLSQVAASETDVLGFY
Ga0222622_104144552	3300022756	Groundwater Sediment	VADSRDLSETRSVPGLQHHFVQLRRRVEGIPSQGVAAKHIIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQGPARGGNNASIAASNVNLSQVAASETDVLGFY
Ga0193714_10176221	3300023058	Soil	FCVAVADARDLSETRSILGLQHDFVQLRRRMERIPSQGVAAKHIIAMKFSTEVIVALAVAVVFVLLSLGAIAREQGQEPARGGHNAYIAASNVNPSQVAANETDVLGFY
Ga0247793_10764981	3300023066	Soil	QHDFVQLRRRMERIPTEGIAAKHVIAMNLSTEAIVALAVAVVFVLLSFGAIAREQGQQPAGAAHDAHIAANSVKLSQVAPSQTDVLGLY
Ga0247688_10738851	3300024186	Soil	MAVADACDLSETRSVPGLQYYFFQLWRRVERIPSEGVAAKHIIAMKISTEAIVALTVAVLFVLLSFGAVAREQGQGPARNGNNAYVAASNV
Ga0207666_10185782	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MADADSRHLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAVSDVNLSRVAPSQTDILGFY
Ga0207697_101785061	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MAVADSRDLSETRSVPGLQHGFLQLRRRMEGIPSQGVAAKHVIAMKFSTESIVALSVAVVFALMSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPTNMDVHGFY
Ga0207693_101476492	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAVADSRYLSETRPVAGLQHHLVQLRRRMERILSQGAAAKYVIAMKFSTEAIVALAVAVVFVLLSLGVIAREQGQGPARGGHNAHIAASNVNLSRVAPSQTDILGFY
Ga0207700_103679561	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAVADSRYLSETRPVAGLQHHLVQLRRRMERILSQGAAAKYVIAMTFSTEAIVALAVAVVFVLLSLGVIAREEGQGPARPMHNAYIANNANLSPVAASETDVLGFY
Ga0207664_102738541	3300025929	Agricultural Soil	MAVADSRYLSETRPVAGLQHHLVQLRRRMERILSQGAAAKYVIAMKFSTEAIVALAVAVVFVFLSLGVIAREQGQGPARRMHNAYIANNANLSPVAASETDVLGFY
Ga0207712_101766252	3300025961	Switchgrass Rhizosphere	MADADSRDLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAVSDVNLSRVAPSQTDILGFY
Ga0207658_107274932	3300025986	Switchgrass Rhizosphere	MADADSRYLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAESDVNLSRVAPSQTDILGFY
Ga0209155_10353371	3300026316	Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFALLSFGAIAREQGQGPARGHNAYIAAGTVNLSRVAPSPTDVLGFY
Ga0209472_12030472	3300026323	Soil	QHGFLQLRRRVEGIPSEGVAAKHISAMKFSTEAIVAMAVAVVFALLSFGAIAREQGQGPARSRHNTYITASNVNQSQVAASDTDVLGVY
Ga0209803_13569411	3300026332	Soil	GLQHHFVQLRRRVEGIPAQGVAAKHMIAMKFSTEAIVAATVAVVFALLSLGAIARERGEREQRGHNACIATSSVSLSQVAASDTDVLGFY
Ga0209808_10464393	3300026523	Soil	MAVADARDLSETRSVPGLQHHFVQLRRRMEGIPSQGVAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGPARGHNAYIVAGNVNLSRVAPSQTDVLGFY
Ga0208706_1011111	3300026685	Soil	MAVADSRYLSETRPVAGLQHHLVQLRRRMERILSQGAAAKYVIAMKFSTEAIVALTVAVVFVLLSLGVIAREQGQGPARRMHNAYIANNANLSPVAASETDVLGFY
Ga0307293_102853681	3300028711	Soil	MAVADLRDLSETRSVPGLQHHFVQLWRRVEGIPSQGVAARHVVAMNFSTEAIVALAVAVVFALLSFGAIAREQGQGPARSGHNAYIAGSNVNLSQVAASETDVLGVY
Ga0307498_100546612	3300031170	Soil	MADADSRDLSKTRSVSGLQHHFVQLGRRMERIPSQGVAAKHIIAMKFSTEAIVALAVTVVFVLLSLGAIAREQGQGPARGGHNAYIAASNVNLSRVAPSQTDVLGFY
Ga0307498_102086981	3300031170	Soil	MADADSRDLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAVSDVN
Ga0170820_103540681	3300031446	Forest Soil	CMADADSRDLSETRSVPGLQHHFVQLRRRMERIPSQGNAAKHISAMKFSTEAIVTLAVAVVFVLLSLGAIAREQGQGPARGRHNAHIAASNVSLSRVAPSQTDILGFY
Ga0170818_1136602882	3300031474	Forest Soil	MADADSRDLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHIIAMKFSTEAIVALAVGVVFVILSFGAIAREQGQRPARGGHNAYIAVSNVNLSRVSVGETNVLGFY
Ga0170818_1153966672	3300031474	Forest Soil	GLQHHFLQLRRRVERIPSQGVAAKHIIAMKFSTEAIVAVAVALVFVLLSFGAIAREQGQRPARAGHKAHVAASNISLSQVAVSETDVLGFY
Ga0310888_101061742	3300031538	Soil	MAVADSCPLSETRSVPGLQHHFVQLRWGVEGIPSQGIVAERLIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQAPARGGHNSYIAANNVNFSQVVTSHTDIPGVY
Ga0318541_101819452	3300031545	Soil	MAVADSRDLSETRSVPGLQHGFLQLGRRMEGIPSQGVAAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPTNMDVHGFY
Ga0310887_110654961	3300031547	Soil	PAEFCMADADSRHLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAHIAASNVNLSQVAASETDVLGFY
Ga0310886_107502581	3300031562	Soil	MAVADSCPLSETRSVPGLQHHFVQLRWGVEGIPSQGIVAERLIAMKFSTEAIVAVAVAVVFVLLSFGAIAREQGQAPARGGHNSYIAANNVNFSQGVTSDVY
Ga0307469_104877032	3300031720	Hardwood Forest Soil	MAVADARDLSETRSVPGLQHHFLQLRRRLERIPSQGVAAKHIIAMRFSTEAIVAAAVALVFVILSFGAIAREQGQGPARAGHNAHVAASNISLSQVAVSETDVLAFY
Ga0307468_1010385262	3300031740	Hardwood Forest Soil	MAVADARDLSETRSVPGLQHHFLQLRRRLERIPSQGVAAKHIIAMRFSTEAIVAAAVALVFVILSFGAIAREQGQGPARGGHNAYIAVSDVNLSRVAPSQTDILGFY
Ga0307473_103945662	3300031820	Hardwood Forest Soil	MAVVDSRDLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGEPGRGGPNAYIAASKVNLSQVSTSETDVLGFY
Ga0310917_101190941	3300031833	Soil	DSRDLSETRSVPGLQHGFLQLRRRMEGIPSQGVAAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPATTGQNTYIAAGNVNLSQVAPTNMDVHGFY
Ga0310900_101854302	3300031908	Soil	MADADSRHLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAVVFVLLSLGAIAREQGQGPARGGHNAYIAASNVNLSRVAPSQTDILGFY
Ga0306923_105621222	3300031910	Soil	MAVADSRDLSETRSVPGLQHGFLQLRRRMEGIPSQGVAAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPTNMDVHGFY
Ga0310913_101275742	3300031945	Soil	MAVADSRDLSETRSVPGLQHGFLQLGRRMEGIPSQGVAAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPATTGQNTYIAAGNVNLSQVAPTNMDVHGFY
Ga0310899_106525661	3300032017	Soil	MADADSRDLSETRSVSGLQHHFVQLGRRMERIPSQGVAAKHISAMKFSTEAIVALAVAIVFALLSFGAIAREQGQRPAGSGHNAYIAASNVNLSQVAASNPDVLGFY
Ga0310911_105091612	3300032035	Soil	MAVADSRDLSETRSVPGLQHGFLQLRRRMEGIPSQGVAAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPGTTGQNTYIAASNVNLSQVAPTNMDVHGFY
Ga0318533_112294281	3300032059	Soil	TEFCMAVADSRDLSETRSVPGLQHGFLQLRRRMEGIPSQGVAAKHVIAMKFSTESIVALAVAVVFALMSFGAIAREQEQRPATTGQNTYIAASNVNLSQVAPTNMDVHGFY
Ga0307470_102637702	3300032174	Hardwood Forest Soil	MAVADARDLSETRSVPGLQHHFLQLRRRLERIPSQGVAAKHIIAMRFSTEAIVAAAVALVFVILSFGAIAREQGQGPARAGHNAHVAASNVNLSQVAVSNTDVLGFY
Ga0364943_0202681_201_524	3300034354	Sediment	MAVADSRDLSETRSVPGLQHHFVQLRRRVEGIPSQGIAAKHIIAMKFSTEAIVALAVAVVFVLLSFGAIAREQGQGAARGGNNASIAASNVNLSQVAASETDVLGFY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068677

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences