Metagenome Family F068548

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F068548
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	75 residues
Representative Sequence	LADGPYDEDVDTISRELDPDKRARMTQALAQKLYDDYRGVMLGVRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Number of Associated Samples	107
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	88.71 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.194 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.936 % of family members)
Environment Ontology (ENVO)	Unclassified (23.387 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.484 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.98% β-sheet: 0.00% Coil/Unstructured: 49.02%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00496	SBP_bac_5	66.13
PF13191	AAA_16	2.42
PF07719	TPR_2	1.61
PF07883	Cupin_2	0.81
PF13231	PMT_2	0.81
PF06537	DHOR	0.81
PF00528	BPD_transp_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	59.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.94 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	59.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.65 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	59.68 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	18.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	44.35 %
Actinobacteria bacterium 13_1_40CM_4_65_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	18.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	44.35 %
Actinobacteria bacterium 13_1_40CM_4_65_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	18.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %
Unclassified	root	N/A	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2044078003\|MGB_F5IW0KN16JQF66	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300002561\|JGI25384J37096_10263421	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300004268\|Ga0066398_10222487	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300004281\|Ga0066397_10103381	Not Available	600	Open in IMG/M
3300004633\|Ga0066395_11013665	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300005172\|Ga0066683_10032839	All Organisms → cellular organisms → Bacteria → Proteobacteria	3000	Open in IMG/M
3300005174\|Ga0066680_10030405	All Organisms → cellular organisms → Bacteria → Proteobacteria	3050	Open in IMG/M
3300005174\|Ga0066680_10405796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	865	Open in IMG/M
3300005181\|Ga0066678_10124660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1586	Open in IMG/M
3300005294\|Ga0065705_10368724	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300005295\|Ga0065707_10035955	All Organisms → cellular organisms → Bacteria → Proteobacteria	1005	Open in IMG/M
3300005330\|Ga0070690_101664624	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300005332\|Ga0066388_108007503	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300005356\|Ga0070674_101920695	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300005764\|Ga0066903_108538125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	522	Open in IMG/M
3300005844\|Ga0068862_100122664	All Organisms → cellular organisms → Bacteria → Proteobacteria	2292	Open in IMG/M
3300006034\|Ga0066656_10734112	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300006844\|Ga0075428_101239648	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300006844\|Ga0075428_101239650	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300006846\|Ga0075430_101358908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300006871\|Ga0075434_101565788	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	668	Open in IMG/M
3300006871\|Ga0075434_101977092	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300006914\|Ga0075436_100472456	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	915	Open in IMG/M
3300007076\|Ga0075435_100617258	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300009090\|Ga0099827_10028853	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3978	Open in IMG/M
3300009094\|Ga0111539_10013327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10273	Open in IMG/M
3300009137\|Ga0066709_101030650	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300009147\|Ga0114129_10100567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4001	Open in IMG/M
3300009147\|Ga0114129_10933519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1097	Open in IMG/M
3300009162\|Ga0075423_10308528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1658	Open in IMG/M
3300009553\|Ga0105249_11366539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	780	Open in IMG/M
3300009799\|Ga0105075_1062971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300009806\|Ga0105081_1017885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	849	Open in IMG/M
3300009808\|Ga0105071_1010505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1219	Open in IMG/M
3300009817\|Ga0105062_1006234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1761	Open in IMG/M
3300009818\|Ga0105072_1066871	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300009820\|Ga0105085_1127650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300009821\|Ga0105064_1098995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300009836\|Ga0105068_1097952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300010043\|Ga0126380_10950819	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300010320\|Ga0134109_10224191	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300010336\|Ga0134071_10324161	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300010359\|Ga0126376_10974189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	846	Open in IMG/M
3300010359\|Ga0126376_11878384	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300010362\|Ga0126377_12412559	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	602	Open in IMG/M
3300010362\|Ga0126377_13421147	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	513	Open in IMG/M
3300010398\|Ga0126383_12862381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	564	Open in IMG/M
3300012199\|Ga0137383_10983721	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	615	Open in IMG/M
3300012202\|Ga0137363_10081816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2408	Open in IMG/M
3300012202\|Ga0137363_11122634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300012206\|Ga0137380_10873778	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012206\|Ga0137380_11230056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300012209\|Ga0137379_10209012	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1866	Open in IMG/M
3300012210\|Ga0137378_10670530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	948	Open in IMG/M
3300012349\|Ga0137387_10310756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1140	Open in IMG/M
3300012350\|Ga0137372_10545267	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300012582\|Ga0137358_10368906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	972	Open in IMG/M
3300012918\|Ga0137396_10233677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1355	Open in IMG/M
3300012918\|Ga0137396_10392678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1028	Open in IMG/M
3300012922\|Ga0137394_10217772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1632	Open in IMG/M
3300012927\|Ga0137416_10390616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1176	Open in IMG/M
3300012929\|Ga0137404_11282088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	675	Open in IMG/M
3300012930\|Ga0137407_11396601	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	665	Open in IMG/M
3300012930\|Ga0137407_11546285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300012948\|Ga0126375_10735694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	773	Open in IMG/M
3300012971\|Ga0126369_12042847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	661	Open in IMG/M
3300012972\|Ga0134077_10341156	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300014150\|Ga0134081_10349789	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300014154\|Ga0134075_10346298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300015241\|Ga0137418_10243863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1529	Open in IMG/M
3300015241\|Ga0137418_10492720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	982	Open in IMG/M
3300015245\|Ga0137409_10033263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4984	Open in IMG/M
3300015255\|Ga0180077_1115996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	565	Open in IMG/M
3300015371\|Ga0132258_10235861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4462	Open in IMG/M
3300015373\|Ga0132257_102351941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300017654\|Ga0134069_1170774	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	733	Open in IMG/M
3300017656\|Ga0134112_10477855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300018075\|Ga0184632_10054176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1735	Open in IMG/M
3300018075\|Ga0184632_10149729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1029	Open in IMG/M
3300025173\|Ga0209824_10142177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	867	Open in IMG/M
3300025322\|Ga0209641_11043155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300025923\|Ga0207681_10795516	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	790	Open in IMG/M
3300026313\|Ga0209761_1176672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	975	Open in IMG/M
3300026326\|Ga0209801_1011050	All Organisms → cellular organisms → Bacteria → Proteobacteria	4679	Open in IMG/M
3300026333\|Ga0209158_1012388	All Organisms → cellular organisms → Bacteria → Proteobacteria	4116	Open in IMG/M
3300026536\|Ga0209058_1281668	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	573	Open in IMG/M
3300027654\|Ga0209799_1105715	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300027880\|Ga0209481_10709359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M
3300027954\|Ga0209859_1012216	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1627	Open in IMG/M
3300027961\|Ga0209853_1122644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300028380\|Ga0268265_10099947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2340	Open in IMG/M
3300031543\|Ga0318516_10307146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	917	Open in IMG/M
3300031544\|Ga0318534_10638052	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300031546\|Ga0318538_10288666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	883	Open in IMG/M
3300031562\|Ga0310886_10816611	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300031681\|Ga0318572_10356555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	867	Open in IMG/M
3300031720\|Ga0307469_11550159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300031744\|Ga0306918_10337503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1167	Open in IMG/M
3300031748\|Ga0318492_10424019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300031781\|Ga0318547_10490384	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	758	Open in IMG/M
3300031782\|Ga0318552_10067574	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1722	Open in IMG/M
3300031820\|Ga0307473_10444759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	861	Open in IMG/M
3300031820\|Ga0307473_11056488	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300031846\|Ga0318512_10462877	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	641	Open in IMG/M
3300031859\|Ga0318527_10127630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1058	Open in IMG/M
3300031860\|Ga0318495_10028731	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300031860\|Ga0318495_10495089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300031910\|Ga0306923_10047490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4724	Open in IMG/M
3300031945\|Ga0310913_10116786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1819	Open in IMG/M
3300031946\|Ga0310910_11476215	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	522	Open in IMG/M
3300031949\|Ga0214473_10585878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1233	Open in IMG/M
3300032003\|Ga0310897_10148894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	981	Open in IMG/M
3300032012\|Ga0310902_10262684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1045	Open in IMG/M
3300032044\|Ga0318558_10394170	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300032052\|Ga0318506_10099160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1243	Open in IMG/M
3300032075\|Ga0310890_10866901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	719	Open in IMG/M
3300032075\|Ga0310890_10889084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	710	Open in IMG/M
3300032090\|Ga0318518_10546580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300032179\|Ga0310889_10233182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	865	Open in IMG/M
3300032180\|Ga0307471_100586150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1273	Open in IMG/M
3300032180\|Ga0307471_100950927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1026	Open in IMG/M
3300032180\|Ga0307471_101535148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	823	Open in IMG/M
3300033289\|Ga0310914_11074686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300033290\|Ga0318519_11025059	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.68%
Host-Associated	Host-Associated	15.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.45%
Plants	Host-Associated → Plants	15.32%
Aquatic	Environmental → Aquatic	3.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.23%
Sediment	Environmental → Aquatic → Sediment	2.42%
Freshwater	Environmental → Aquatic → Freshwater	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.48%
Sand	Environmental → Terrestrial → Soil → Sand	8.06%
Loam	Environmental → Terrestrial → Soil → Loam	6.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.87%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	8.06%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.68%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	8.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Switchgrass, Maize And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Switchgrass, Maize And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2044078003	Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300025173	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water (SPAdes)	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MGB_2606760	2044078003	Switchgrass, Maize And Miscanthus Rhizosphere	LCDGPYDEDVDTISRELDGEKRTRMTQALGQKLYDEYRGVMLGMRSLTWALSKKVSGWQTLVYVPLENNYEYVS
JGI25384J37096_102634212	3300002561	Grasslands Soil	CDGTYDEDVDTVSRELDTDKRSRMTQALAQRLYDDYRGVMLGMRSLTWAVSKKVSSWQTLVYVPLENNYEYVS*
Ga0066398_102224872	3300004268	Tropical Forest Soil	DVDTISRELDADKRAKMTHALAQKLYDNYHGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS*
Ga0066397_101033812	3300004281	Tropical Forest Soil	CDGPYDEDIETIMRELNADKRATLSRALGQKLYDDYRGVMLGIKSITWVTSKKVSAWQTLAYVPMETNYEYVS*
Ga0066395_110136651	3300004633	Tropical Forest Soil	LADGPYDEDVDAISRELDAEKRARMTHAFAQKLYDEYRGVMLGMRSLTWAVSKKVNNWPTLVYVPLENNYEYVS*
Ga0066683_100328393	3300005172	Soil	VDTISRELDVEKRARMTQALGQKLYDEYRGVMLGVRSLTWVVSKKVHSWPTLVYVPLENNYEYVS*
Ga0066680_100304053	3300005174	Soil	DGPYDEDVDTISRELDADKRARMTQSLAQKLYDEYRGVMLGMRSLTWAVSKKVTSWQTLVYVPLENNYEYVS*
Ga0066680_104057962	3300005174	Soil	SRELDADKRAKMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS*
Ga0066678_101246602	3300005181	Soil	KGAFNLLCDGPYDEDVDTISRELDADKRAKMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS*
Ga0065705_103687242	3300005294	Switchgrass Rhizosphere	PVLAWQRAIYSKGPFNLLADGPYDEDVDAISRELDAEKRARMTHAFAQKLYDEYRGVMLGMRSLTWAVSRKVNNWPTLVYVPLENNYEYVS*
Ga0065707_100359552	3300005295	Switchgrass Rhizosphere	LLADGPYDEDIDTISRELDVEKRARATHALAQRLYDEYRGVMLGMRSLTWAVSKKVNSWPTLVYVPLENNYEYVS*
Ga0070690_1016646241	3300005330	Switchgrass Rhizosphere	FNLLAEGPYDEDVDTISRELDAEKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVTSWQTLVYVPLENNYEYVS*
Ga0066388_1080075031	3300005332	Tropical Forest Soil	AEKRARMTHTFAQKLYDEYRGVMLGMRSLTWAVSKKVNNWPTLVYVPLENNYEYVS*
Ga0070674_1019206951	3300005356	Miscanthus Rhizosphere	DEDVDTISRELDAEKRGRLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS*
Ga0066903_1085381251	3300005764	Tropical Forest Soil	KGAFNILCDGPYDEEIDTILREVDVERRTKLTQDLGQKLYDEHRGVMLGVRSIAWALSKKVASWQTLTYVPLENNYEYVAAAGS*
Ga0068862_1001226643	3300005844	Switchgrass Rhizosphere	PYDEDVDTISRELDAEKRARLTQALGQKLYDDYRGVMLGVRSLTWAVSKKVNSWQSLVYVPLENNYEYVS*
Ga0066656_107341122	3300006034	Soil	SRELDVEKRARMTQALGQKLYDEYRGVMLGVRSLTWAVSKKVHSWPTLVYVPLENNYEYVS*
Ga0075428_1012396481	3300006844	Populus Rhizosphere	WQRAIHSKGAFNILCDGVYDEDVDTTSRELDADKRARMQQTLAQKMYDDYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS*
Ga0075428_1012396501	3300006844	Populus Rhizosphere	WQRAIHSKGAFNILCDGVYDEDVDTTSRELDADKRARMQQALAQKMYDDYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS*
Ga0075430_1013589081	3300006846	Populus Rhizosphere	EPVLAWQRCIISKGPFNLLAEGPYDEDVETISRELDANRRAQMTQALAQKLYDEYRGVMLGTRSLTWAVSKKVSAWQTLVYVPLENNYEYVS*
Ga0075434_1015657881	3300006871	Populus Rhizosphere	CIHSKGAFNLLCDGTYDEEVDTISRELDGEKRARMTRALGQKLYDDHRGVMLGMRSVTWAVTKKVSAWQTLVYVPLENNYEYVS*
Ga0075434_1019770921	3300006871	Populus Rhizosphere	IYSKGAFNLLAEGPYDEDVDTISRELDAEKRGRLTQALGQKLYDDYRGVMLGVRSITWAVSKKVTSWQSLVYVPLENNYEYVS*
Ga0075436_1004724563	3300006914	Populus Rhizosphere	KGAFNLLCDGTYDEEVDTISRELDGEKRARMTRALGQKLYDDHRGVMLGMRSVTWAVTKKVSAWQTLVYVPLENNYEYVS*
Ga0075435_1006172582	3300007076	Populus Rhizosphere	DVDAVSRELDTDKRARMTQALAQRLYDDYRGVMLGMRSLTWAVSKKVNGWQTLVYVPLENNYEYVS*
Ga0099827_100288531	3300009090	Vadose Zone Soil	ISRELDGDKRARMTHALAQKLYDDYRGVMLWVRSLTWAVSKKVNSWQTLVYVPLENNYEYVS*
Ga0111539_100133279	3300009094	Populus Rhizosphere	YDEDIDTVSRELDVEKRARMTQALAQRLYDDYRGVMLGMRSLTWAVSKKVNNWPTLVYVPLENNYEYVS*
Ga0066709_1010306502	3300009137	Grasslands Soil	FNLLCDGPYDEDVDTISRELDAEKRARMTHTLAQKLYDNYHSVMLGTRSVTWAVSKKVTSWPTLVYVPLENNYEYVS*
Ga0114129_101005671	3300009147	Populus Rhizosphere	IETISRELDTDKRARMTQALGQRLYDDYRGVMLGMRSLTWAVSKKVTSWQTLVYVPLENNYEYVS*
Ga0114129_109335191	3300009147	Populus Rhizosphere	NILCDGVYDEDVDTTSRELDADKRARMQQTLAQKMYDDYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS*
Ga0075423_103085282	3300009162	Populus Rhizosphere	SKGAFNLLADGPYDEDVDTISRELDAEKRGRLTQALGQKLYDDYRGVMLGVRSITWAVSKKVTSWQSLVYVPLENNYEYVS*
Ga0105249_113665391	3300009553	Switchgrass Rhizosphere	VDTISRELDAEKRARLTQALGQKLYDDYRGVMLGVRSLTWAVSKKVNSWQSLVYVPLENNYEYVS*
Ga0105075_10629711	3300009799	Groundwater Sand	LNTILREVDGEKRGKLTHDLAQKLYDGYYGAQLGVKSTTWAVSKKVSGWQTLVYVPLENNYEYVS*
Ga0105081_10178851	3300009806	Groundwater Sand	TISRELDGDKRARMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVSGWQTLVYVPLENNYEYVS*
Ga0105071_10105051	3300009808	Groundwater Sand	DGPYDEDVDTISRELDGEKRARMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVSGWQTLVYVPLENNYEYVS*
Ga0105062_10062342	3300009817	Groundwater Sand	YSKGPFNLLCDGPYDEDVDTISRELDAEKRTRMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVNSWQTLVYVPLENNYEYVS*
Ga0105072_10668712	3300009818	Groundwater Sand	DEDVDTISRELDGEKRARMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVNSWQTLVYVPLENNYEYVS*
Ga0105085_11276502	3300009820	Groundwater Sand	DADKRARMTQALGQRLYDEYRGVMLGMRSLTWAVSKKVSSWQTLVYVPLENNYEYVS*
Ga0105064_10989951	3300009821	Groundwater Sand	YDEDVDTISRELNGEKRARMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVNSWQTLVYVPLENNYEYVS*
Ga0105068_10979522	3300009836	Groundwater Sand	EDVDTISRELDAEKRTRMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVNSWQTLVYVPLENNYEYVS*
Ga0126380_109508192	3300010043	Tropical Forest Soil	WQRAIYSKGPFNLLADGPYDEDVDVISRELDAEKRARMTHTFAQKLYDEYRGVMLGMRSLTWAVSKKVNNWPTLVYVPLENNYEYVS*
Ga0134109_102241912	3300010320	Grasslands Soil	EPVLGWQRCIHSKGAFNLLCDGPYDEDVDTISRELDADKRARMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS*
Ga0134071_103241612	3300010336	Grasslands Soil	QRCIHSKGAFNLLCDGPYDEDVDTISRELDADKRARMTHALAQKLYDNYHGVMLGTRSVTWAVTKRVTAWQTLVYVPLENNYEYVS*
Ga0126376_109741891	3300010359	Tropical Forest Soil	YDEDVETISRELDGDKRARMTHALAQKLYDNYHGVMLGTRSLTWAVTKKVTAWQTLVYVPLENNYEYVS*
Ga0126376_118783842	3300010359	Tropical Forest Soil	IISKGPFNLLCDGPYDEDVETISRELDGDKRAKMTHALAQKLYDNYHGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS*
Ga0126377_124125591	3300010362	Tropical Forest Soil	DAASRELDVDKRARMQQALAQRLYDDYRGVMLGVRSLTWAVSKKVTGWQTLVYVPLENNYEYVS*
Ga0126377_134211471	3300010362	Tropical Forest Soil	LAWQRAIYSKGPFNLLADGPYDEDIDTISRELDVEKRARATHALAQRLYDEYRGVMLGMRSLTWAVSKKVNNWPTLVYVPLENNYEYVS*
Ga0126383_128623812	3300010398	Tropical Forest Soil	HSKGAFNLLCDGPYDEDVDTISRELDGDKRARMTHALAQKLYDNYHGVMLGTRSLTWAVTKKVTAWQTLVYVPLENNYEYVS*
Ga0137383_109837212	3300012199	Vadose Zone Soil	EDVDTISRELDAEKRGRLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS*
Ga0137363_100818161	3300012202	Vadose Zone Soil	FNLLCDGPYDEDVDTISRELDGEKRARMTQAMGQKLYDEYRGVMLGMRSLTWAVSKKVSGWQTLVYVPLENNYEYVS*
Ga0137363_111226342	3300012202	Vadose Zone Soil	HDVDKRARMTQALGQRLYDESRGVMLGVRSLTWAVSKKVNSWQTLVYVPLENNYEYVS*
Ga0137380_108737781	3300012206	Vadose Zone Soil	TLREVDADKRAKLTHDLAQKLYDDYRGVMLGVKSTTWAVTKKVTAWQTLVSVPLENNYEYVS*
Ga0137380_112300562	3300012206	Vadose Zone Soil	CIHSKGAFNLLCDGPYDEDVDTVSRELDADKRAKMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS*
Ga0137379_102090121	3300012209	Vadose Zone Soil	RCIYTKGAFNLLCDGPYDEDVDTISRELDADKRAKMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS*
Ga0137378_106705301	3300012210	Vadose Zone Soil	RELDADKRAKMTQALAQKLYDDYRGVMLGMRSLTWAVSKKVSSWQTLVYVPLENNYEYVS
Ga0137387_103107562	3300012349	Vadose Zone Soil	EDVDTVSRELDVEKRARLTQALAQKLYDEYRGVMLGMRSLTWAVSKKVNSWPTLVYVPLENNYEYVS*
Ga0137372_105452671	3300012350	Vadose Zone Soil	NLLCEGPYDEDLEATLREVDADKRAKLTHDLAQKLYDDYRGVMLGVKSTTWAVTKKVTAWQTLVSVPLENNYEYVS*
Ga0137358_103689061	3300012582	Vadose Zone Soil	IHSKGAFNLLCDGTYDEDVDTISRELDTDKRARMTQALAQRLYDDYRGVMLGVRSLTWAVSKKVTSWQTLISVPLENNYEYVS*
Ga0137396_102336772	3300012918	Vadose Zone Soil	GWQRCIHSKGAFNLLCDGPYDEDVDTISRELDAERRARMTHALAQKLYDDYSGVMLGTRSLTWAVTKKVSGWQTLVYVPLGNNYEYVS*
Ga0137396_103926782	3300012918	Vadose Zone Soil	FNLLCDGPYDEDVETISRELDAEKRARMTQALGQRLYDEHSGVMLGVRSLTWAVSKKVSGWQTLVYVPLENNYEYVS*
Ga0137394_102177721	3300012922	Vadose Zone Soil	PYDEDVDTISRELDVDKRARMTQALGQRLYDEYRGVMLGMRSLTWAVSKKVTSWQTLVYVPLENNYEYVS*
Ga0137416_103906161	3300012927	Vadose Zone Soil	SRELDAEKRARMTQVLGQKLYDDYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS*
Ga0137404_112820882	3300012929	Vadose Zone Soil	HSKGAFNLLCDGPYDEDVDTISRELDADKRAKMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS*
Ga0137407_113966011	3300012930	Vadose Zone Soil	LDGEKRARMTHALGQKLYDDSRGVMLGMRSLTWAVSKKVTSWQTLVSVPLENNYEYVS*
Ga0137407_115462851	3300012930	Vadose Zone Soil	NLLCDGTYDEDVDTVSRELNADKRARMTQALAQRLYDDSRGVMLGMRSLTWAVSKKVSSWQTLVYVPLENNYEYVS*
Ga0126375_107356942	3300012948	Tropical Forest Soil	DGPYDEDIDTISRELDVEKRGRLTQALGQKLYDNYHGVMLGVKSITWAVTKKVTAWPTLVYVPLENNYEYVS*
Ga0126369_120428471	3300012971	Tropical Forest Soil	DAISRELDAEKRARMTHAFAQKLYDEYRGVMLGMRSLTWAVSKKVNNWPTLVYVPLENNYEYVS*
Ga0134077_103411562	3300012972	Grasslands Soil	WQRCIHSKGAFNLLCDGPYDEDVDTISRELDADKRARMTHALAQKLYDNYHGVMLGTRSLTWAVTKKVTAWQTLVYVPLENNYEYVS*
Ga0134081_103497892	3300014150	Grasslands Soil	RELDADKRARMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS
Ga0134075_103462981	3300014154	Grasslands Soil	IYSKGPFNLLADGPYDEDVDTISRELDVEKRARMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVHSWPTLVYVPLENNYEYVS*
Ga0137418_102438631	3300015241	Vadose Zone Soil	WQRCIYSKGPFNLLADGPYDEDVDTISRELDQEKRARMTQALGQKLYDDYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS*
Ga0137418_104927201	3300015241	Vadose Zone Soil	WQRCIYSKGPFNLLADGPYDEDVDTISRELDAEKRARMTQVLGQKLYDDYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS*
Ga0137409_100332631	3300015245	Vadose Zone Soil	PVLAWQRCIYSKGPFNLLADGPYDEDVDTISRELDAEKRARMTQVLGQKLYDDYRGVMLGMRSLTWAVSKKVTGWQPLAYVPL*
Ga0180077_11159962	3300015255	Soil	VLAWQRAIYSKGAFYILCDGLYDEEIDTTSRELDVEKRARLTQALGQKLYDNYHGVMLGVKSTTWAVTKKVNAWQTLVYVPLENNYEYVS*
Ga0132258_102358611	3300015371	Arabidopsis Rhizosphere	YSKGAFNLLAEGPYDEDVDTISRELDAEKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVTSWQNLVYVPLENNYEYVS*
Ga0132257_1023519411	3300015373	Arabidopsis Rhizosphere	DGPYDEDVDTISRELDADKRGRLTQALGQKLYDDYRGVMLGVRSITWAMSKKVNSWQTLVYVPLENNYEYVS*
Ga0134069_11707742	3300017654	Grasslands Soil	LDADKRARMTHALGQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS
Ga0134112_104778551	3300017656	Grasslands Soil	PFNLLADGPYDEDVDTISRELDVEKRARLTQALAQKLYDEYRGVMLGVRSLTWAVSKKVHSWPTLVYVPLENNYEYVS
Ga0184632_100541761	3300018075	Groundwater Sediment	GPYDEDVDTISRELDGEKRSRMTQALGQKLYDDYRGVMLGMRSLTWAVSKKVSSWQTLVFVPLENNYEYVS
Ga0184632_101497291	3300018075	Groundwater Sediment	GPYDEDVDTISRELDGEKRSRMTQALGQKLYDDYRGVMLGMRSLTWAVSKQVNSWQTLVYVPLENNYEYVS
Ga0209824_101421772	3300025173	Wastewater	IWSKGAFNLLCDGPYDEDLDATLREVDAEKRAKLTHDLGQKLYDDYRGVMLGVKSTTWAVTKKVSGWQTLVSVPLENNYEYVS
Ga0209641_110431551	3300025322	Soil	TKGAFNLLCDGPYDEDIDACLREVDGEKRTRLTRALGQKLYDDYRGVMLGVKSTTWAVTRKVGSWQTLVSVPLENNYEYVSAGS
Ga0207681_107955162	3300025923	Switchgrass Rhizosphere	VLAWQRAIYSKGPFNLLADGPYDEDVDTISRELDVEKRARMTQALAQRLYDDYRGVMLGMRSLTWAVSKKVNNWPTLVYVPLENNYEYVS
Ga0209761_11766722	3300026313	Grasslands Soil	CDGTYDEDVDTVSRELDTDKRSRMTQALAQRLYDDYRGVMLGMRSLTWAVSKKVSSWQTLVYVPLENNYEYVS
Ga0209801_10110503	3300026326	Soil	YDEDVDTISRELDADKRAKMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS
Ga0209158_10123883	3300026333	Soil	NRLCDGPYDEDVDTVSRELDADKRAKMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS
Ga0209058_12816681	3300026536	Soil	EPVLGWQRCIHSKGAFNLLCDGPYDEDVDTVSRELDADKRAKMTQALAQKLYDDYRGVMLGTRSVTWAVSKRVTSWQTLVYVPLENNYEYVS
Ga0209799_11057152	3300027654	Tropical Forest Soil	RELDVEKRARATHALAQRLYDEYRGVMLGMRSLTWAVSKKVNSWPTLVYVPLENNYEYVS
Ga0209481_107093591	3300027880	Populus Rhizosphere	FNILCDGVYDEDVDTTSRELDADKRARMQQTLAQKMYDDYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS
Ga0209859_10122162	3300027954	Groundwater Sand	EPVLAWQRCIYTKGAFNLLCDGPYDEDVDTISRELDGEKRARMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVNSWPTLVYVPLENNYEYVS
Ga0209853_11226441	3300027961	Groundwater Sand	ILREVDAEKRAKLTRDFGQKLYDQYPAVMLGVKSTTWAVSKQVGGWQTLVYVPLENNYEYVSTAS
Ga0268265_100999471	3300028380	Switchgrass Rhizosphere	PYDEDVDTISRELDAEKRARLTQALGQKLYDDYRGVMLGVRSLTWAVSKKVNSWQSLVYVPLENNYEYVS
Ga0318516_103071461	3300031543	Soil	ILCDGPYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318534_106380522	3300031544	Soil	PYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSLTWAVSKKVNAWQTLVYVPLENNYEYVS
Ga0318538_102886662	3300031546	Soil	SKGAFNILCDGPYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0310886_108166111	3300031562	Soil	DEDVDTISRELDADKRARMQQALAQKMYDDYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS
Ga0318572_103565552	3300031681	Soil	LCDGPYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0307469_115501591	3300031720	Hardwood Forest Soil	LDGDKRARMTQALGQKLYDEYRGVTLGMRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0306918_103375032	3300031744	Soil	NILCDGPYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318492_104240192	3300031748	Soil	LAWQRAIYSKGAFNILCDGPYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318547_104903841	3300031781	Soil	IYSKGAFNILCDGPYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318552_100675742	3300031782	Soil	VLAWQRAIYSKGAFNLLADGPYDEDVDTISRELDPDKRARMTQALAQKLYDDYRGVMLGVRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0307473_104447591	3300031820	Hardwood Forest Soil	CIYSKGPFNLLADGPYDEDVDTISRELDGDKRARMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0307473_110564881	3300031820	Hardwood Forest Soil	LGWQRAIHSKGAFNLLCDGTYDEDVDTVSRELDADKRARMTHALAQRLYDDYRGVMLGMRSLTWAVSKKVNGWQTLVYVPLENNYEYVS
Ga0318512_104628771	3300031846	Soil	FNLLADGPYDEDVDTISRELDPDKRARMTQALAQKLYDDYRGVMLGVRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0318527_101276301	3300031859	Soil	DEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318495_100287313	3300031860	Soil	FNILCDGPYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318495_104950891	3300031860	Soil	AFNLLADGPYDEDVDTISRELDPDKRARMTQALAQKLYDDYRGVMLGVRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0306923_100474901	3300031910	Soil	YDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0310913_101167861	3300031945	Soil	LADGPYDEDVDTISRELDPDKRARMTQALAQKLYDDYRGVMLGVRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0310910_114762151	3300031946	Soil	WQRAIYSKGAFNILCDGPYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0214473_105858781	3300031949	Soil	DGPYDEDIDACLREVDGEKRTRLTRALGQKLYDDYRGVMLGVKSTTWAVTKKVGSWQTLVSVPLENNYEYVSAGS
Ga0310897_101488941	3300032003	Soil	IHSKGAFNILCDGVYDEDVDTISRELDADKRARMQQALAQKMYDEYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS
Ga0310902_102626841	3300032012	Soil	ADGPYDEDVDTISRELDAEKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318558_103941701	3300032044	Soil	LADGPYDEDVDTISRELDPDKRARMTQALAQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318506_100991602	3300032052	Soil	IYSKGAFNLLADGPYDEDVDTISRELDPDKRARMTQALAQKLYDDYRGVMLGVRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0310890_108669012	3300032075	Soil	TISRELDADKRARMQQALAQKMYDEYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS
Ga0310890_108890841	3300032075	Soil	GAFNLLADGPYDEDVDTISRELDADKRGRLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0318518_105465801	3300032090	Soil	PYDEDVDTISRELDADKRARLTQALGQKLYDDYRGVMLGVRSITWAVSKKVNSWQTLVYVPLENNYEYVS
Ga0310889_102331821	3300032179	Soil	DEDVDTISRELDADKRARMQQALAQKMYDEYRGVMLGMRSLTWAVSKKVNAWQTLVYVPLENNYEYVS
Ga0307471_1005861501	3300032180	Hardwood Forest Soil	YDEDIDTISRELDVEKRARATHVLAQRLYDEYRGVMLGMRSLTWAVSKKVTTWPTLVYVPLENNYEYVS
Ga0307471_1009509272	3300032180	Hardwood Forest Soil	EDVDTISRELDADKRARMTHALGQKLYDEYRGVMLGMRSLTWAVSKKVNSWPTLVSVPLENNYEYVS
Ga0307471_1015351482	3300032180	Hardwood Forest Soil	PVLAWQRCIYSKGPFNLLADGPYDEDVDTISRELDGDKRARMTQALGQKLYDEYRGVMLGMRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0310914_110746861	3300033289	Soil	RELDPDKRARMTQALAQKLYDDYRGVMLGVRSLTWAVSKKVTSWQTLVYVPLENNYEYVS
Ga0318519_110250591	3300033290	Soil	LADGPYDEDVDTISRELDPDKRARMTQALAQKLYDDYRGVMLGVRSLTWAVSKKVNAWQTLVYVPLENNYEYVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068548

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences