Metagenome Family F067973

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067973
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	97 residues
Representative Sequence	MDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKIADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Number of Associated Samples	110
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.20 %
% of genes near scaffold ends (potentially truncated)	44.00 %
% of genes from short scaffolds (< 2000 bps)	83.20 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.000 % of family members)
Environment Ontology (ENVO)	Unclassified (37.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.58% β-sheet: 26.02% Coil/Unstructured: 50.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF07963	N_methyl	3.20
PF00072	Response_reg	1.60
PF01192	RNA_pol_Rpb6	0.80
PF14332	DUF4388	0.80
PF07690	MFS_1	0.80
PF00211	Guanylate_cyc	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	0.80
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	98.40 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	98.40 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	95.20 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.40 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	95.20 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.40 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	95.20 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.40 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	95.20 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.60 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	95.20 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.60 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8978708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1292	Open in IMG/M
2162886015\|FOassembled-_contig22472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
2170459005\|F1BAP7Q01B283Q	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
2199352025\|deepsgr__Contig_158889	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	790	Open in IMG/M
2228664021\|ICCgaii200_c0940759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3865	Open in IMG/M
2228664021\|ICCgaii200_c0942030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3683	Open in IMG/M
3300000891\|JGI10214J12806_10098992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	731	Open in IMG/M
3300000891\|JGI10214J12806_10335984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	908	Open in IMG/M
3300000956\|JGI10216J12902_107955090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1542	Open in IMG/M
3300000956\|JGI10216J12902_110985165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300001139\|JGI10220J13317_10805281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300001431\|F14TB_101610921	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	979	Open in IMG/M
3300002126\|JGI24035J26624_1005354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1229	Open in IMG/M
3300002899\|JGIcombinedJ43975_10099334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300004016\|Ga0058689_10010774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1409	Open in IMG/M
3300004114\|Ga0062593_100017967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3625	Open in IMG/M
3300004114\|Ga0062593_102063648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300004157\|Ga0062590_101331118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300004157\|Ga0062590_102690917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300005166\|Ga0066674_10216939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	910	Open in IMG/M
3300005166\|Ga0066674_10266907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300005172\|Ga0066683_10123912	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1577	Open in IMG/M
3300005174\|Ga0066680_10144338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1486	Open in IMG/M
3300005175\|Ga0066673_10022316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2939	Open in IMG/M
3300005178\|Ga0066688_10098387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1784	Open in IMG/M
3300005180\|Ga0066685_10229346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1278	Open in IMG/M
3300005184\|Ga0066671_10836905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300005187\|Ga0066675_10082792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2075	Open in IMG/M
3300005187\|Ga0066675_10496566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	912	Open in IMG/M
3300005187\|Ga0066675_10756061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300005289\|Ga0065704_10852890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300005294\|Ga0065705_10092282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005294\|Ga0065705_10205849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1400	Open in IMG/M
3300005295\|Ga0065707_10227408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1178	Open in IMG/M
3300005331\|Ga0070670_101580077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300005338\|Ga0068868_101804700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300005355\|Ga0070671_100173733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1823	Open in IMG/M
3300005356\|Ga0070674_100524830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300005367\|Ga0070667_101563616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300005434\|Ga0070709_10325962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1129	Open in IMG/M
3300005435\|Ga0070714_100135907	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300005439\|Ga0070711_100775545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300005447\|Ga0066689_10067176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1976	Open in IMG/M
3300005450\|Ga0066682_10599371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300005451\|Ga0066681_10382096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300005457\|Ga0070662_101459932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300005555\|Ga0066692_10245303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1130	Open in IMG/M
3300005563\|Ga0068855_102289287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300005575\|Ga0066702_10084545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1782	Open in IMG/M
3300005576\|Ga0066708_10071124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2002	Open in IMG/M
3300005598\|Ga0066706_11508134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300006031\|Ga0066651_10601738	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300006032\|Ga0066696_10200174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1274	Open in IMG/M
3300006175\|Ga0070712_101136159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300006358\|Ga0068871_101377874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300006791\|Ga0066653_10674450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300006871\|Ga0075434_101954209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300006904\|Ga0075424_102791103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300007076\|Ga0075435_102022662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300009156\|Ga0111538_12052291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300009162\|Ga0075423_10871212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	954	Open in IMG/M
3300010303\|Ga0134082_10159205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	915	Open in IMG/M
3300010303\|Ga0134082_10260890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300010321\|Ga0134067_10376341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300010322\|Ga0134084_10176456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300010371\|Ga0134125_12873253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300012198\|Ga0137364_10413667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1010	Open in IMG/M
3300012200\|Ga0137382_10265838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1191	Open in IMG/M
3300012200\|Ga0137382_10929059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300012202\|Ga0137363_10758185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300012206\|Ga0137380_10071386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3177	Open in IMG/M
3300012350\|Ga0137372_10037442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4400	Open in IMG/M
3300012354\|Ga0137366_11111051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300012913\|Ga0157298_10404525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300012929\|Ga0137404_10065284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2837	Open in IMG/M
3300012929\|Ga0137404_10300783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1392	Open in IMG/M
3300012930\|Ga0137407_10171189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1932	Open in IMG/M
3300012951\|Ga0164300_11100380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300012957\|Ga0164303_11043709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300012961\|Ga0164302_10380939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	955	Open in IMG/M
3300012985\|Ga0164308_11112029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300012989\|Ga0164305_10891835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300013296\|Ga0157374_10663111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1055	Open in IMG/M
3300013297\|Ga0157378_11262786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	779	Open in IMG/M
3300013297\|Ga0157378_11751851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300013306\|Ga0163162_10112620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2820	Open in IMG/M
3300015242\|Ga0137412_11287370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300015357\|Ga0134072_10145391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300015371\|Ga0132258_11192141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1925	Open in IMG/M
3300015371\|Ga0132258_11386727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1776	Open in IMG/M
3300015373\|Ga0132257_100311574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1894	Open in IMG/M
3300017792\|Ga0163161_11806345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300018054\|Ga0184621_10157724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	817	Open in IMG/M
3300018066\|Ga0184617_1173033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300018081\|Ga0184625_10528493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300018433\|Ga0066667_10157077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1613	Open in IMG/M
3300018468\|Ga0066662_10857154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300019362\|Ga0173479_10363613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300019877\|Ga0193722_1040992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1185	Open in IMG/M
3300019879\|Ga0193723_1076714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	961	Open in IMG/M
3300019882\|Ga0193713_1191420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300019887\|Ga0193729_1225146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	618	Open in IMG/M
3300020059\|Ga0193745_1120587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300021344\|Ga0193719_10006342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4872	Open in IMG/M
3300021344\|Ga0193719_10035666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2149	Open in IMG/M
3300021413\|Ga0193750_1012456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2127	Open in IMG/M
3300022756\|Ga0222622_10093614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1830	Open in IMG/M
3300025915\|Ga0207693_10021164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5169	Open in IMG/M
3300025928\|Ga0207700_10043843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3289	Open in IMG/M
3300025930\|Ga0207701_10070627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3170	Open in IMG/M
3300025931\|Ga0207644_10977282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300025933\|Ga0207706_10192589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1789	Open in IMG/M
3300025941\|Ga0207711_11953511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300025949\|Ga0207667_11872764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300026035\|Ga0207703_12324723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300026309\|Ga0209055_1145129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	835	Open in IMG/M
3300026327\|Ga0209266_1012243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	4948	Open in IMG/M
3300026527\|Ga0209059_1007406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4966	Open in IMG/M
3300026530\|Ga0209807_1018599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3397	Open in IMG/M
3300026540\|Ga0209376_1000423	All Organisms → cellular organisms → Bacteria	47078	Open in IMG/M
3300026550\|Ga0209474_10456358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300026552\|Ga0209577_10442051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	911	Open in IMG/M
3300027460\|Ga0207506_1007116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300027750\|Ga0209461_10015149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1347	Open in IMG/M
3300031469\|Ga0170819_10741311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.00%
Host-Associated	Host-Associated	24.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.80%
Plants	Host-Associated → Plants	24.00%
Aquatic	Environmental → Aquatic	3.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.80%
Sediment	Environmental → Aquatic → Sediment	3.20%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.60%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.20%
Loam	Environmental → Terrestrial → Soil → Loam	6.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.20%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	31.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.20%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.60%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2162886015	Grass soil microbial communities from Rothamsted Park, UK - FO (Mercury 0.02g/kg) assembled	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00065430	2088090015	Soil	MDTRYRVVPGGEDPMSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCIVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRL
FOassembled-_0472.00001570	2162886015	Grass Soil	MDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTYEAFRLQRRLAKLH
E41_07929920	2170459005	Grass Soil	MDSLIDRMEGGLRLKILSSTRRKNFFAHLKKAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYMEEAFRLRRRLAKLQ
deepsgr_02632220	2199352025	Soil	MESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
ICCgaii200_09407591	2228664021	Soil	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCIVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAK
ICCgaii200_09420304	2228664021	Soil	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCIVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLHRRILITGRI
JGI10214J12806_100989921	3300000891	Soil	MDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTYEAFRLQRRLAKLHRKILISGRI
JGI10214J12806_103359841	3300000891	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCTVTSIHPSGVGHVHSKDDVIMYRDEAFRLRRRLAKLHRKILISGRI
JGI10216J12902_1079550902	3300000956	Soil	MNPLIDQMEGGLRLKVFSSTQRKHFFAHLKGAEQIHFANKLSEPGKCSVTSIHPPGVGRVRPKHDVIMYMHDAFRLRRRLAKLHRKILITGKIG*
JGI10216J12902_1109851651	3300000956	Soil	MDPLIGRMESGLRLKVLSPTQRKNFFAHLKGAEQVHFARMFRELGKCTVTSIHPSGVGGARSKHNVIMYKEEAFRLQRRLAKLHRKIVISGRIS*
JGI10220J13317_108052811	3300001139	Soil	RMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCTVTSIHPSGVGHVHSKDDVIMYRDEAFRLRRRLAKLHRKILISGRIS*
F14TB_1016109211	3300001431	Soil	MDTRYRVVPGGEDPMSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
JGI24035J26624_10053542	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	MDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSXHDVIMYTYEAFRLQRRLAKLHRKILISGRIS*
JGIcombinedJ43975_100993341	3300002899	Soil	PMSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCIVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0058689_100107742	3300004016	Agave	MTSHQPIQVDQLIDPMETGLRLKIFSSAQRKHFFVHLKGAEQIHFANKVADSGICRVTSIHPPGVGHMRSKHDVTMYTDDAFRLRRRLKKLRRKILISGLIDKPPG
Ga0062593_1000179675	3300004114	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCTVTSIHPSGVGHVHSKDDVIMYRDEAFRLRRRLAKLHRKILISGRIS*
Ga0062593_1020636481	3300004114	Soil	MEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0062590_1013311182	3300004157	Soil	MDPLIGRMESGLRLKILSPPRRKDFFAHLKVAQQVHFANKIAEPGKCRVTSIHPSGPGGIQSKHDVIMYTEEALRLRRRLAKLQRKFLISGRIS*
Ga0062590_1026909171	3300004157	Soil	MDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0066674_102169391	3300005166	Soil	MESGLRLKILSFTRRKNFFAHLKGAQQVHFANKIADPGKCMVTSIHPAGVGRGHSKHDVVVYTDEAFRLRRRLTKLHRKILISGRINR*
Ga0066674_102669072	3300005166	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYMDEAFRLRRRLAKLHRKILITGRIN*
Ga0066683_101239123	3300005172	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYTDEAFRLRRRLAKLERKILITGRIN*
Ga0066680_101443383	3300005174	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRITSIHPSGVGRVHPTHDVIMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0066673_100223163	3300005175	Soil	MDSLIDRMESGLRLKILSFTRRKNFFAHLKGAQQVHFANKIADPGKCMVTSIHPAGVGGGHSKHDVVMYADEAFRLRRRLAKLQRKIVISGKLDR*
Ga0066688_100983873	3300005178	Soil	IGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRITSIHPSGVGRVHPTHDVTMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0066685_102293462	3300005180	Soil	MIDRMESGLRLKLFSSAQRKRFFGHLKGAEQIHFANKAAESGKCQVISIHPPGVGHIRSKHDVTMYMDDAFRLRRRLMKLRRKILISGKLNR*
Ga0066671_108369051	3300005184	Soil	MDPLIGGMESGLRLKILSSTRRRDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGVGRVHPTHDVIMYTDEAFRLQRRLAKLHRKILITGRIT*
Ga0066675_100827922	3300005187	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRITSIHPSGVGRVHPTHDVTMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0066675_104965661	3300005187	Soil	MSFSLILASFTPGTQNASYSPIQMDSLIDRMESGLRLKILSSTRRKNFFAHLKGAQQVHFANKIADPGKCMVTSIHPAGVGGGHSKHDVVMYADEAFRLRRRLAKLQRKIVISGKLDR*
Ga0066675_107560612	3300005187	Soil	MESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYMDEAFRLRRRLAKLHRKILITGRIN*
Ga0065704_108528901	3300005289	Switchgrass Rhizosphere	MESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0065705_100922821	3300005294	Switchgrass Rhizosphere	GLRLKILSPTRHKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGPGHVQSKHYVIMYTEEAFRLQRRLAKLHRKILISGRXS*
Ga0065705_102058492	3300005294	Switchgrass Rhizosphere	MESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLTRKIVISGRLDR*
Ga0065707_102274082	3300005295	Switchgrass Rhizosphere	MASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0070670_1015800771	3300005331	Switchgrass Rhizosphere	MDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTYEAFRLQRRLAKL
Ga0068868_1018047002	3300005338	Miscanthus Rhizosphere	ENASYKPIQIDDPLTIRMESGLRLRMRSPTQRKNFFAHLKGAEQIHFANKITEFGKCRVTSIHPSGVGRVHPKHDVIMYTDDAFRLRRRLAKLHRKILITGRIG*
Ga0070671_1001737332	3300005355	Switchgrass Rhizosphere	MDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKIADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGGLDR*
Ga0070674_1005248302	3300005356	Miscanthus Rhizosphere	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0070667_1015636161	3300005367	Switchgrass Rhizosphere	MESGLRLRMRSPTQRKNFFAHLKGAEQIHFANKIAEPDKCRVTSIHPSGVGRVHPKHDVIMYTDDAFRLRRRLAKL
Ga0070709_103259622	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDSLIDRMESGLRLKILSSTRRKNFFAHLKKAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0070714_1001359073	3300005435	Agricultural Soil	MDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTYEAFRLQRRLAKLHRKILISGRIS*
Ga0070711_1007755451	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGSLDR*
Ga0066689_100671761	3300005447	Soil	KILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYMDEAFRLRRRLAKLHRKILITGRIN*
Ga0066682_105993712	3300005450	Soil	MSFSLILASFTPGTQNASYSPIQMDSLIDRMESGLRLKILSSTRRKNFFAHLKGAQQVHFANKIADPGKCMVTSIHPAGVGRGHSKHDVVMYIDEAFRLRRRLAKLHRKI
Ga0066681_103820961	3300005451	Soil	MDSLIDRMESGLRLKILSSTRRKNFFAHLKGAQQVHFANKIADPGKCMVTSIHPAGVGGGHSKHDVVMYADEAFRLRRRLAKLQRKIVISGKLDR*
Ga0070662_1014599321	3300005457	Corn Rhizosphere	MDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0066692_102453032	3300005555	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0068855_1022892871	3300005563	Corn Rhizosphere	AVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0066702_100845451	3300005575	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRITSIHPSGVGRVHPTHDVTMYTDEAFRLRRRLAKLHRK
Ga0066708_100711243	3300005576	Soil	MIDRIESGLRLKLFSSAQRKRFFAHLKGAEQIHFANKAAESGKCQVISIHPPGVGHIRSKHDVTMYMDDAFRLRRRLAKLSKKILISGKMNPPGQRY*
Ga0066706_115081342	3300005598	Soil	MIDRIESGLRLKLFSSAQRKRFFAHLKEAEQIHFANKAVESGKCQVISIHPPGVGHIRSKHDVTMYMDDAFRLRRRLAKLSKKILISGKMNPPRQRY*
Ga0066651_106017381	3300006031	Soil	MSFSLILASFTPGTQNASYSPIQMDSLIDRMERGLRLKIFSSAQRKHFFAHLKGAEQIHFANKAAESGNCQVISIHPPGVGHIRSKHDVTMYMDDAF
Ga0066696_102001741	3300006032	Soil	PMIDRIESGLRLKLFSSAQRKRFFGHLKGAEQIHFANKAAESGNCQVISIHPPGVGHIRSKHDVTMYMDDAFRLRRRLMKLRRKILISGKMNR*
Ga0070712_1011361591	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0068871_1013778741	3300006358	Miscanthus Rhizosphere	IQMDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTYEAFRLQRRLAKLHRKILISGRIS*
Ga0066653_106744501	3300006791	Soil	MDSLIDRMESGLRLKIFSSAQRKHFFAHLKGAEQIHFANKITEPDKCKVTSIHPAEVGGVRSKHDVIMYANEALRLQGRLAKLHRKILITGRIT*
Ga0075434_1019542092	3300006871	Populus Rhizosphere	MDPLIGRTESGLRLKVLTSTRRRDFFAHLKRAQQVHFANKITEPGKCKVTSIHPPGVGHVRSKHDAVMYTDEAFRLQRRLAKLHRKILISGRIS
Ga0075424_1027911031	3300006904	Populus Rhizosphere	MHRPQPVQMDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0075435_1020226621	3300007076	Populus Rhizosphere	MDPLIGRTESGLRLKVLTSTRRRDFFAHLKRAQQVHFANKITEPGKCKVTSIHPPGVGHVRSKHDAVMYTDEAFRLQRRLAKLHRKILISGRIS*
Ga0111538_120522911	3300009156	Populus Rhizosphere	MDSLIDRMEGGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADAGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0075423_108712122	3300009162	Populus Rhizosphere	LSWPHSLPAHKMHRPQPVQMDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0134082_101592051	3300010303	Grasslands Soil	PMIDRMESGLRLKLFSSAQRKRFFAHLKGAEQIHFANKAAESGNCQVISIHPPGVGHIRSKHDVTMYMDDAFRLQRRLMKLRRKILISGKMNR*
Ga0134082_102608901	3300010303	Grasslands Soil	QMDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRITSIHPSGVGRVHPTHDVTMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0134067_103763411	3300010321	Grasslands Soil	QMDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYTDEAFRLRRRLAKLERKILITGRIN*
Ga0134084_101764561	3300010322	Grasslands Soil	RMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYTDEAFRLRRRLAKLERKILITGRIN*
Ga0134125_128732531	3300010371	Terrestrial Soil	LRLVHATARENASYKPIQIDDPLTIRMESGLRLRMRSPTQRKNFFAHLKGAEQIHFANKITEFGKCRVTSIHPSGVGRVHPKHDVIMYTDDAFRLRRRLAKLHRKILITGKIG*
Ga0137364_104136672	3300012198	Vadose Zone Soil	MNPLIGRMESGLRLKVLSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGVGRVHPTHDVIMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0137382_102658381	3300012200	Vadose Zone Soil	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCTVTSIHPAGVGGGHSKHDVVMYTAEAFRLRRRLAKLQRKIVISGRLDR*
Ga0137382_109290591	3300012200	Vadose Zone Soil	PIQMDPLIGGMESGQRLKILSSTRRRDFFAHLKGAQQVHFANRIAEPGKCRVTSIHPSGVGRVHPTHDVIMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0137363_107581852	3300012202	Vadose Zone Soil	MDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTAEAFRLRRRLAKLQRKIVISGRLDR*
Ga0137380_100713863	3300012206	Vadose Zone Soil	MNPLIGRMESGLRLKVLSSTRRKNFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGVGRVHPTRDVIMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0137372_100374426	3300012350	Vadose Zone Soil	MDPLISRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGVGRVHPTRDVIMYTDEAFRLQRRLAKLHRKILITGRIN*
Ga0137366_111110511	3300012354	Vadose Zone Soil	MNPLIGRMESGLRLKVLSSTRRKNFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGVGRVHPTHDVIMYTDEAFRLRRRLAKLHRKILITG
Ga0157298_104045251	3300012913	Soil	GGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0137404_100652842	3300012929	Vadose Zone Soil	MESGLRLKILSSTRRKNFFAHLKGAQQVHFANNIAEPGKCRVTSIHPAGVGRGHSKHDVVMYTDEAFRLRRRLANLQRKILISGRINR*
Ga0137404_103007832	3300012929	Vadose Zone Soil	MDPLIGGMESGLRLKILSSTRRRDFFAHLKGAQQVHFANKIAEPGKCRITSIHPSGVGRVHPKHDVIMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0137407_101711893	3300012930	Vadose Zone Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGVGRVHPTHDVIMYTDEAFRLRRRLAKLHRKILITGRIT*
Ga0164300_111003801	3300012951	Soil	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0164303_110437092	3300012957	Soil	MNPLIGRMESELRLKVFSSTQRKHFFAHLKGAEQIHFANKIAEPDKCRVTSIHPSGVGRVHPKHDVTMYTDDAFRLRRRLAKLHRKILITGRIG*
Ga0164302_103809392	3300012961	Soil	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKL
Ga0164308_111120291	3300012985	Soil	PRYRVVPGGEDPMSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0164305_108918351	3300012989	Soil	MNPLIGRMESELRLKVFSSTQRKHFFAHLKGAEQIHFANKIAEPDKCRVTSIHPSGVGRVHPKHDVTMYTDDAFRLRRR
Ga0157374_106631112	3300013296	Miscanthus Rhizosphere	ASYKPIQIDDPLTIRMESGLRLRMRSPTQRKNFFAHLKGAEQIHFANKITEFGKCRVTSIHPSGVGRVHPKHDVIMYTDDAFRLRRRLAKLHRKILITGKIG*
Ga0157378_112627861	3300013297	Miscanthus Rhizosphere	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKIADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0157378_117518511	3300013297	Miscanthus Rhizosphere	TESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTYEAFRLQRRLAKLHRKILISGRIS*
Ga0163162_101126203	3300013306	Switchgrass Rhizosphere	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYREEAFRLRRRLAKLQRKIVISGRLDR*
Ga0137412_112873701	3300015242	Vadose Zone Soil	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTAEAFRLRRRLAKLQRKIV
Ga0134072_101453912	3300015357	Grasslands Soil	ESGLRLKLFSSAQRKRFFAHLKGAEQIHFANKAAESGNCQVISIHPPGVGHIRSKHDVTMYMDDAFRLRRRLMKLRRKILISGKMNR*
Ga0132258_111921415	3300015371	Arabidopsis Rhizosphere	MDPLIGRLESGLRLKVLTSTRRRDFFVHLKRAQQVHFANKTTEPGKCKVTSIHPPGVGHVRSKHDVVMYTDEAFRLQRRLAKLHRKILISGRIS*
Ga0132258_113867272	3300015371	Arabidopsis Rhizosphere	MGSRFLAVNASQQMNPLIGQMESGLRLKVFSSTQRKHFFAHLKGAEQIHFANKLAEPGKCSVTSIHPPTVGRVRPKHDVIMYTHDAFRLRRRLAKLHRKILITGKIG*
Ga0132257_1003115742	3300015373	Arabidopsis Rhizosphere	MDSLIDRMEGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADAGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR*
Ga0163161_118063451	3300017792	Switchgrass Rhizosphere	IDPRYRIVPGGEDPMSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0184621_101577242	3300018054	Groundwater Sediment	MDTLIGRMESGLRLKVLTFTQRKDFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSRHDVIMYTDEAFRLQRRLAKLDRKILISGRIS
Ga0184617_11730331	3300018066	Groundwater Sediment	MDSSIGLMESGLRLKILSSTRRKNFFAHLKGAQQVHFANKIAEPGKCRVTSIHPAGVGRGHSKHDVVMYTEEAFRLRRRLAKLQRKILISGGINR
Ga0184625_105284931	3300018081	Groundwater Sediment	MSFSLIMASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0066667_101570772	3300018433	Grasslands Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYMDEAFRLRRRLAKLHRKILITGRIN
Ga0066662_108571541	3300018468	Grasslands Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRITSIHPSGVGRVHPTHDVIMYTEEAFRLRRRLAKLHRKILITGRIN
Ga0173479_103636132	3300019362	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCTVTSIHPSGVGHVHSKDDVIMYRDEAFRLRRRLAKLHRKILISGRIS
Ga0193722_10409922	3300019877	Soil	MDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYRDEAFRLQRRLAKLHRKILISGRIS
Ga0193723_10767141	3300019879	Soil	MDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTDEAFRLQRRLAKLHRKILISGRIS
Ga0193713_11914202	3300019882	Soil	RTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTDEAFRLQRRLAKLHRKILISGRIS
Ga0193729_12251462	3300019887	Soil	MDPLIGRMESGLRLKVLTSTQRKGFFAHLKGAQQVHFVNKITEPGKCKVTSIHPPGVGHVRSKHDVVMYTDEAFRLQRRLAKLHRKILISGGIDG
Ga0193745_11205872	3300020059	Soil	IQMDPLIGRMESGLRLKVLTFTQRKDFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTDEAFRLQRRLAKLHRKILISGRIS
Ga0193719_100063422	3300021344	Soil	MDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0193719_100356662	3300021344	Soil	MDLLIGRTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTDEAFRLQRRLAKLDRKILISGRIS
Ga0193750_10124562	3300021413	Soil	MESGLRLKLLSSTRRKNFFAHLKGAQQVHFANNIAEPGKCSVTSIHPAGVGRGHSKHDVVMYADEAFRLRRRLAKLHKKILISGRINR
Ga0222622_100936142	3300022756	Groundwater Sediment	MASFTPGTQNASSLAAQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0207693_100211645	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0207700_100438431	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ESGLRLKILSSTRRKNFFAHLKRAQQVHFANKIADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGGLDR
Ga0207701_100706271	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MASFTPGTQNASSLAVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0207644_109772821	3300025931	Switchgrass Rhizosphere	MDSLIDRMESGLRLKILSSTRRKNFFAHLKRAQQVHFANKIADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0207706_101925891	3300025933	Corn Rhizosphere	MESLIDRMEGGGLRLKILSSTRRKNFFAHLKRAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0207711_119535111	3300025941	Switchgrass Rhizosphere	DPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTYEAFRLQRRLAKLHRKILISGRIS
Ga0207667_118727641	3300025949	Corn Rhizosphere	AVQMDSLIDRMESGLRLKILSSTRRKNFFAHLKKAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR
Ga0207703_123247231	3300026035	Switchgrass Rhizosphere	LRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSKHDVIMYTYEAFRLQRRLAKLHRKILISGRIS
Ga0209055_11451291	3300026309	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRITSIHPSGVGRVHPTHDVTMYTDEAFRLRRRLAKLHRKILITGRIT
Ga0209266_10122431	3300026327	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYMDEAFRLRRRLAKLHRKIL
Ga0209059_10074061	3300026527	Soil	DPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGVGRVHPTHDVIMYTDEAFRLQRRLAKLHRKILITGRIT
Ga0209807_10185994	3300026530	Soil	MIDRIESGLRLKLFSSAQRKRFFAHLKEAEQIHFANKAVESGKCQVISIHPPGVGHIRSKHDVTMYMDDAFRLRRRLAKLSKKILIS
Ga0209376_100042346	3300026540	Soil	MDPLIGRMESGLRLKILSSTRRKDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSPGVGRVHPTHDVIMYTDEAFRLRRRLAKLHRKILITGRIN
Ga0209474_104563582	3300026550	Soil	IDRMESGLRLKLFSSAQRKRFFGHLKGAEQIHFANKAAESGNCQVISIHPPGVGHIRSKHDVTMYMDDAFRLRRRLMKLRRKILISGKMNR
Ga0209577_104420511	3300026552	Soil	MDPLIGGMESGLRLKILSSTRRRDFFAHLKGAQQVHFANKIAEPGKCRVTSIHPSGVGRVHPTHDVIMYTDEAFRLQRRLAKLHRKILITGRIT
Ga0207506_10071162	3300027460	Soil	MDPLIAQTESGLRLKVLTSTRRKGFFAHLKGAQQVHFANNITEPGKCKVTSIHPPGVGHVRSIHDVIMYTYEAFRLQRRLAKLHRKILISGRIS
Ga0209461_100151491	3300027750	Agave	MTSHQPIQVDQLIDPMETGLRLKIFSSAQRKHFFVHLKGAEQIHFANKVADSGICRVTSIHPPGVGHMRSKHDVTMYTDDAFRLRRRLKKLRRKI
Ga0170819_107413111	3300031469	Forest Soil	VQMDSLIDRMEGGLRLKILSSTRRKNFFAHLKKAQQVHFANKVADPGKCMVTSIHPAGVGGGHSKHDVVMYTEEAFRLRRRLAKLQRKIVISGRLDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences