NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F066987

Metagenome / Metatranscriptome Family F066987

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F066987
Family Type Metagenome / Metatranscriptome
Number of Sequences 126
Average Sequence Length 41 residues
Representative Sequence MAFTRTQIGIAVGAGVLLVGVFVGYLWWLSNQGPVLARS
Number of Associated Samples 111
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.20 %
% of genes near scaffold ends (potentially truncated) 99.21 %
% of genes from short scaffolds (< 2000 bps) 87.30 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.476 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(9.524 % of family members)
Environment Ontology (ENVO) Unclassified
(21.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.413 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 43.28%    β-sheet: 0.00%    Coil/Unstructured: 56.72%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF01196Ribosomal_L17 42.86
PF03118RNA_pol_A_CTD 11.90
PF07676PD40 5.56
PF07719TPR_2 1.59
PF00411Ribosomal_S11 0.79
PF04240Caroten_synth 0.79
PF02687FtsX 0.79
PF08241Methyltransf_11 0.79
PF02576RimP_N 0.79
PF08544GHMP_kinases_C 0.79
PF02590SPOUT_MTase 0.79
PF01176eIF-1a 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG0203Ribosomal protein L17Translation, ribosomal structure and biogenesis [J] 42.86
COG0202DNA-directed RNA polymerase, alpha subunit/40 kD subunitTranscription [K] 11.90
COG0100Ribosomal protein S11Translation, ribosomal structure and biogenesis [J] 0.79
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 0.79
COG0779Ribosome maturation factor RimPTranslation, ribosomal structure and biogenesis [J] 0.79
COG157623S rRNA pseudoU1915 N3-methylase RlmHTranslation, ribosomal structure and biogenesis [J] 0.79
COG2324Uncharacterized membrane proteinFunction unknown [S] 0.79


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.27 %
UnclassifiedrootN/A8.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001471|JGI12712J15308_10011288All Organisms → cellular organisms → Bacteria2411Open in IMG/M
3300004092|Ga0062389_101821881All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300004092|Ga0062389_102200167All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300005450|Ga0066682_10568919All Organisms → cellular organisms → Bacteria → Acidobacteria715Open in IMG/M
3300005526|Ga0073909_10271547All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300005542|Ga0070732_10577153All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005554|Ga0066661_10665089All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005602|Ga0070762_10024125All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3202Open in IMG/M
3300005602|Ga0070762_10744632All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300005764|Ga0066903_104244984All Organisms → cellular organisms → Bacteria → Acidobacteria766Open in IMG/M
3300005921|Ga0070766_10508842Not Available801Open in IMG/M
3300006052|Ga0075029_101114026All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300006175|Ga0070712_100606412All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300006854|Ga0075425_103065577All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300006893|Ga0073928_10044064All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium4091Open in IMG/M
3300007255|Ga0099791_10670270All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300007788|Ga0099795_10160214All Organisms → cellular organisms → Bacteria → Acidobacteria928Open in IMG/M
3300007982|Ga0102924_1248653All Organisms → cellular organisms → Bacteria → Acidobacteria736Open in IMG/M
3300009088|Ga0099830_10377721All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1143Open in IMG/M
3300009629|Ga0116119_1041387All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1211Open in IMG/M
3300009672|Ga0116215_1541800Not Available503Open in IMG/M
3300009698|Ga0116216_10801060All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300009759|Ga0116101_1170683All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300010048|Ga0126373_12203903All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300010339|Ga0074046_10164459All Organisms → cellular organisms → Bacteria1410Open in IMG/M
3300010358|Ga0126370_12252952All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300010358|Ga0126370_12390477All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300010379|Ga0136449_100993468All Organisms → cellular organisms → Bacteria → Acidobacteria1352Open in IMG/M
3300011120|Ga0150983_13208872All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300011269|Ga0137392_10280341All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1375Open in IMG/M
3300011271|Ga0137393_11444480All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300011411|Ga0153933_1088477All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300012351|Ga0137386_10294194All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300012683|Ga0137398_10174028All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1409Open in IMG/M
3300012957|Ga0164303_10312588All Organisms → cellular organisms → Bacteria → Acidobacteria932Open in IMG/M
3300012971|Ga0126369_10262963Not Available1705Open in IMG/M
3300014167|Ga0181528_10847257Not Available515Open in IMG/M
3300014495|Ga0182015_10095830All Organisms → cellular organisms → Bacteria2065Open in IMG/M
3300015167|Ga0167661_1048395All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300017924|Ga0187820_1013408All Organisms → cellular organisms → Bacteria → Acidobacteria1995Open in IMG/M
3300017932|Ga0187814_10197945All Organisms → cellular organisms → Bacteria → Acidobacteria755Open in IMG/M
3300017933|Ga0187801_10412943All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300017943|Ga0187819_10137462All Organisms → cellular organisms → Bacteria → Acidobacteria1457Open in IMG/M
3300017959|Ga0187779_10364876All Organisms → cellular organisms → Bacteria → Acidobacteria936Open in IMG/M
3300018007|Ga0187805_10588602Not Available525Open in IMG/M
3300018008|Ga0187888_1240907All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300018043|Ga0187887_10118609All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1589Open in IMG/M
3300018086|Ga0187769_10349902All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300018086|Ga0187769_11539883All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300018468|Ga0066662_10907071All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300020579|Ga0210407_10719586All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300020581|Ga0210399_10215864All Organisms → cellular organisms → Bacteria → Acidobacteria1597Open in IMG/M
3300020583|Ga0210401_10091128All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2865Open in IMG/M
3300020583|Ga0210401_10212247All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1793Open in IMG/M
3300020583|Ga0210401_10445774All Organisms → cellular organisms → Bacteria → Acidobacteria1157Open in IMG/M
3300021401|Ga0210393_10118924All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2111Open in IMG/M
3300021406|Ga0210386_10930918Not Available743Open in IMG/M
3300021420|Ga0210394_10405563All Organisms → Viruses → Predicted Viral1199Open in IMG/M
3300021420|Ga0210394_10817729All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300021420|Ga0210394_11358661All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300021420|Ga0210394_11729897All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300022730|Ga0224570_107324All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300024225|Ga0224572_1001037All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3865Open in IMG/M
3300025414|Ga0208935_1057806All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300025434|Ga0208690_1068665All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300025442|Ga0208034_1080649All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300025912|Ga0207707_11318068All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300025913|Ga0207695_10123300All Organisms → cellular organisms → Bacteria2557Open in IMG/M
3300025916|Ga0207663_10664164All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300025928|Ga0207700_11897970All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300026025|Ga0208778_1016375All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300026078|Ga0207702_10689586All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300026489|Ga0257160_1051755Not Available710Open in IMG/M
3300026557|Ga0179587_10477531All Organisms → cellular organisms → Bacteria → Acidobacteria817Open in IMG/M
3300026683|Ga0208210_100908All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300027587|Ga0209220_1078932All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium870Open in IMG/M
3300027616|Ga0209106_1155891All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300027652|Ga0209007_1072275All Organisms → cellular organisms → Bacteria → Acidobacteria871Open in IMG/M
3300027783|Ga0209448_10048608All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1427Open in IMG/M
3300027842|Ga0209580_10256330All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300027842|Ga0209580_10316274All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300027853|Ga0209274_10389765All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300027882|Ga0209590_10883478All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300027882|Ga0209590_11023330All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300027884|Ga0209275_10528930All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300027898|Ga0209067_10519456All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300027908|Ga0209006_10146378All Organisms → cellular organisms → Bacteria2075Open in IMG/M
3300028566|Ga0302147_10317862All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300028748|Ga0302156_10291570All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300028801|Ga0302226_10191847All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300028863|Ga0302218_10029327All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1741Open in IMG/M
3300028906|Ga0308309_10778208All Organisms → cellular organisms → Bacteria → Acidobacteria832Open in IMG/M
3300029882|Ga0311368_10282282All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1267Open in IMG/M
3300029915|Ga0311358_10568176All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300029943|Ga0311340_10169547All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2250Open in IMG/M
3300030058|Ga0302179_10029825All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2551Open in IMG/M
3300030503|Ga0311370_10012624All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis13259Open in IMG/M
3300030520|Ga0311372_11398121All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300030580|Ga0311355_10295018All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1633Open in IMG/M
3300030707|Ga0310038_10242253All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300030815|Ga0265746_1041759All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300031128|Ga0170823_12603727All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1170Open in IMG/M
3300031234|Ga0302325_11036778All Organisms → cellular organisms → Bacteria → Acidobacteria1115Open in IMG/M
3300031236|Ga0302324_101672953All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300031238|Ga0265332_10135817All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300031241|Ga0265325_10239481All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300031446|Ga0170820_15548146All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300031474|Ga0170818_101815601Not Available2161Open in IMG/M
3300031708|Ga0310686_105202838All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300031708|Ga0310686_111290234Not Available507Open in IMG/M
3300031711|Ga0265314_10334344All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300031823|Ga0307478_11525251All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300032174|Ga0307470_10780735All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300032770|Ga0335085_10903249All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium963Open in IMG/M
3300032828|Ga0335080_11984227Not Available564Open in IMG/M
3300032892|Ga0335081_10624918All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1324Open in IMG/M
3300032892|Ga0335081_12380951All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300032955|Ga0335076_10233724All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1735Open in IMG/M
3300033887|Ga0334790_033114All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2110Open in IMG/M
3300033888|Ga0334792_065658All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1081Open in IMG/M
3300034125|Ga0370484_0097940All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300034163|Ga0370515_0008491All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium4941Open in IMG/M
3300034163|Ga0370515_0404977All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300034163|Ga0370515_0490705All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300034199|Ga0370514_164102All Organisms → cellular organisms → Bacteria575Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.52%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.94%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa7.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.76%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.76%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.76%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.97%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.97%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil3.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.17%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.17%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.17%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.38%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.38%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.38%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.38%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.38%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.38%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.59%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.59%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.59%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.59%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.59%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.59%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.79%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.79%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.79%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.79%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.79%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009629Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011411Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaGHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300015167Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300022730Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2Host-AssociatedOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300025414Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025434Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025442Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026025Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026683Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN352 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028566Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2EnvironmentalOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030815Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031238Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaGHost-AssociatedOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033887Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1EnvironmentalOpen in IMG/M
3300033888Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1EnvironmentalOpen in IMG/M
3300034125Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12712J15308_1001128813300001471Forest SoilMTFTRTGFTRAQIGIAVGAAALLVFGFLGYIWWLSNQGPVLARSEDHDPL
Ga0062389_10182188123300004092Bog Forest SoilMGFTRTQIGIAVGAGALLVFGFLGYIWWLNNQGPVLARSEDHDPLT
Ga0062389_10220016723300004092Bog Forest SoilMGFTRTQIAIAVTAGALLVFGFLGYIWWLSNQGPVLARSE
Ga0066682_1056891923300005450SoilMAFTRNQIGIAVGAGTLLVLVFLGYVWWLSNQGPVLARSEDRD
Ga0073909_1027154723300005526Surface SoilMAFTRTQIGIAVGVGALLVFGFVGYLWWMSNQGPVLAR
Ga0070732_1057715323300005542Surface SoilMAVTRTQIGIAVGAGVLLVLVFVGYLFWLSNQGPVLA
Ga0066661_1066508913300005554SoilMAANRNQIGIAVGAGALIVLVFLGYIWWLSNQGPVLARSEDHDP
Ga0070762_1002412533300005602SoilMAFTRTQIGIAASAGALLVLVFVGYLWWLSNQGPVLA
Ga0070762_1074463213300005602SoilMAFTRTQIGIAVGVGALLVFGFVGYLWWLSNQGPVRERSEEKD
Ga0066903_10424498413300005764Tropical Forest SoilMAFTKVQIGIAVGTAALLVFGFVGYLWWLSNQGPVLARSEQKDS
Ga0070766_1050884213300005921SoilMGFTRIQIGIAVGVAALLVFGFLGYIWWLSNQGPVLARSE
Ga0075029_10111402623300006052WatershedsMAFTRTQIGIAVGAGVFLVLVFVGYLWWLSNQGPVLA
Ga0070712_10060641213300006175Corn, Switchgrass And Miscanthus RhizosphereMAFTRTQIGIAVGAASLLVLVFVGYLWWLSNQGPVLARSEDHDP
Ga0075425_10306557713300006854Populus RhizosphereMAFTKAQIGIAVGSGALLVFGFVGYLWWLSNQGPVL
Ga0073928_1004406413300006893Iron-Sulfur Acid SpringMAFTRTQIGIAVGAGVLLVAVFLGYVRWLSDQGPVLARS
Ga0099791_1067027013300007255Vadose Zone SoilMAFTRNQIGIAVGAGALLVLVFLGYVWWLSNQGPVLARSEDRDPLTGIPNSVT
Ga0099795_1016021413300007788Vadose Zone SoilMTLYPMQFSKTHLGIAIGAASLLVLVFVGYLWWLSNQPPVL
Ga0102924_124865313300007982Iron-Sulfur Acid SpringMAFTRTQIGIAVGAGVLLVLVFVGYLFWLSNQGPVLARSE
Ga0099830_1037772113300009088Vadose Zone SoilMAFTRNQIGIAVGAGALLVLVFLGYVWWLSNQGPV
Ga0116119_104138723300009629PeatlandMGFTRIQIGIAVSAGALLVFGFLGYIWWLSNQGPVLA
Ga0116215_154180013300009672Peatlands SoilMGFTRTQIAIAAAAGALLVFGFLGYIWWLSNQGPVLARSED
Ga0116216_1080106023300009698Peatlands SoilMAFTRTQIGIAVGAGVLLVGVFVGYLWWLSNQGPVLARS
Ga0116101_117068323300009759PeatlandMGFTRTQIGIAVGAAALLVFGFLGYIWWLSNQGPVLARS
Ga0126373_1220390313300010048Tropical Forest SoilMAFTKTQIGIAVGAGALLVCVFVGYLWWLSNQGPV
Ga0074046_1016445933300010339Bog Forest SoilMAFTRTQIGIAAGTGVLIVGVFVGYLWWLSNQGPVLARSEDHDPL
Ga0126370_1225295213300010358Tropical Forest SoilMAATRTQIGIAVGAGVLLVLVFLGYLWWLSNQGPVLARSEDHDPLTGL
Ga0126370_1239047723300010358Tropical Forest SoilMAFTRTQIGIAVGTGALLVFGFVGYLWWLSNQPPVLARSEQ
Ga0136449_10099346813300010379Peatlands SoilMAFTKTQIGIAAGTGILLVSVFVGYLWWLSNQGPVLARSEDHDPLTG
Ga0150983_1320887213300011120Forest SoilMAFTRNQIGIAVGAGTLLVLVFLGYVWWLSNQGPVLARSEDRDPLTGIPNS
Ga0137392_1028034133300011269Vadose Zone SoilMATTRSQIGIAVGAGALLVLGFLGYVWWLNNQGPVLA
Ga0137393_1144448023300011271Vadose Zone SoilMEFSRTQVGIAVGVGALLVAIFFGYLLWLNNQGPVLARSEE
Ga0153933_108847723300011411Attine Ant Fungus GardensMGFTRTQIAIAVGVGALLVFGFLGYIWWLSNQGPVLSRSEEHDPLTGL
Ga0137386_1029419423300012351Vadose Zone SoilMAFTRNQIGIAIGAGTLLVLVFLGYVWWLSNQGPVLARSEDRDPLTGIPN
Ga0137398_1017402813300012683Vadose Zone SoilMATTRSQIGIAVGAGALLVLGFLGYVWWLSNQGPVLARSD
Ga0164303_1031258813300012957SoilMAFTRTQIGIAVGVGALLVFGFVGYLWWMSNQGPVLARSEDKD
Ga0126369_1026296313300012971Tropical Forest SoilMAFTRTQIGIAVGTGALLVFGFVGYLWWLSNQPPVLARSEEKDTLTGLPV
Ga0181528_1084725713300014167BogMAFTRTQIGIAVTTGVLLVGGFVGYLYWLSNQGPVLARSE
Ga0182015_1009583013300014495PalsaMGFTRTQIGIAVGAAALLVFGFLGYIWWLSNQGPVLARSEDHDPLTGL
Ga0167661_104839523300015167Glacier Forefield SoilMAFTKTQIGIAVGAASLLVLVFLGYLWWLNGQGPVLARSDDHDPLTG
Ga0187820_101340823300017924Freshwater SedimentMAFTKTQIGIAVSAGVLLVLVFVGYLWWLSNQGPVLARSEEHDP
Ga0187814_1019794513300017932Freshwater SedimentMAFTKTQIGIAVSAGVLLVLVFVGYLWWLSNQGPVL
Ga0187801_1041294323300017933Freshwater SedimentMAATRTQIGIAVGAGILLVLVFVGYLWWLSNQGPVLARSE
Ga0187819_1013746223300017943Freshwater SedimentMAFTKTQIGIAVGAGVLLVLVFVGYLWWLSNQGPVLARSE
Ga0187779_1036487613300017959Tropical PeatlandVAFTKTQIGIAVGAGALLVLVFLGYLWWLSNQGPVLARSDDHDPL
Ga0187805_1058860213300018007Freshwater SedimentMAFTKTQIGIAVGGGALLVFVFVGYLWWLSNQGPVL
Ga0187888_124090713300018008PeatlandMGFTRTQIGIAVGAAALLVFGFLGYIWWLSNQGPVLARSEERDS
Ga0187887_1011860913300018043PeatlandMGFTRTQIGIAVGAAALLVFGFLGYIWWLSNQGPVLARSEERDSLSGL
Ga0187769_1034990213300018086Tropical PeatlandMASFTKNQIGIAVGFASVLVLIFVGYLWWLSNQGP
Ga0187769_1153988323300018086Tropical PeatlandMAFTRTQIGIAVGVGALLVLSFLGYIWWLSNQGPV
Ga0066662_1090707133300018468Grasslands SoilMAFTRTQIGIAVGVGALLVFGFVGYLWWLSNQGPVL
Ga0210407_1071958613300020579SoilMAFTRNQIGIAVGAGTLLVLVFLGYVWWLSNQGPVLARSEDRDPLTGM
Ga0210399_1021586433300020581SoilMAFTRTQIGIAGGAGTLLVLVFVGYIWWLSNQGPVLARSEDHDPLT
Ga0210401_1009112843300020583SoilMAFTRTQIGIAASAGALLVLVFVGYLWWLSNQGPVLAR
Ga0210401_1021224733300020583SoilMAFTRTHIGIAVGAGVLLVGIFVGYLWWLSNQGPVLARSEDR
Ga0210401_1044577413300020583SoilMAFTRTQIGIAVGIGALLVFGFVGYLWWLSNQGPVWARSE
Ga0210393_1011892433300021401SoilMGFTRTQIGIAVGAGALLVLVFLGYIWWLSNQGPVLARSEDH
Ga0210386_1093091823300021406SoilMGFTRVQIGIAVGVAALLVFGFLGYIWWLSNQGPVLARSE
Ga0210394_1040556313300021420SoilMGFTRTQIGIAVGAGVLLVAVFLGYVWWLSDQGPV
Ga0210394_1081772913300021420SoilMAFTRTQIGIAVGAGTLLVLVFVGYIWWLSNQGPVLA
Ga0210394_1135866123300021420SoilMAFTRTQIGIAVGAGVLLVGVFVGYLWWLSNQGPVLARSDDHD
Ga0210394_1172989713300021420SoilMGFTRTQIGIAVGVASLLVFGFLGYIWWLSNQGPVLARSEDHDPLT
Ga0224570_10732413300022730RhizosphereMAFTRTQIGIAVGAGVLLVAVFLGYVWWLSDQGPVLARS
Ga0224572_100103753300024225RhizosphereMAFTRTQIGIAVGAGVLLVAVFLGYVWWLSDQGPVLARSEERDPLS
Ga0208935_105780623300025414PeatlandMAFTKTQIGIAVGAGALLVMVFVGYLWWLSNQGPVLARSE
Ga0208690_106866513300025434PeatlandMAFTRTQIGIAVGAGVLLVAVFLGYVWWLSDQGPVLARSEERD
Ga0208034_108064913300025442PeatlandMAFTRTQIGIAVGAGTMLVLVFVGYLWWLSNQGPVLAR
Ga0207707_1131806823300025912Corn RhizosphereMAFTKTQIGIAAGAGVFLVLVFLGYLWWLSNQGPVLARSED
Ga0207695_1012330043300025913Corn RhizosphereMAFTKTQIGIAAGAGVLLVMVFVGYLWWLSNQGPVLARSE
Ga0207663_1066416413300025916Corn, Switchgrass And Miscanthus RhizosphereMAFTKTQIGIAAGAGVFLVLVFLGYLWWLSNQGPVLAR
Ga0207700_1189797023300025928Corn, Switchgrass And Miscanthus RhizosphereMGFTRTQIAIAAGAGALMVLVFLGYVWWLSNQGPVLARSQD
Ga0208778_101637513300026025Rice Paddy SoilMAFTKTQIGIAVGAAALLVGLFLGYLWWLSNQGPVLARSEDHDPLTG
Ga0207702_1068958613300026078Corn RhizosphereMAFTKTQIGIAAGAGVFLVLVFLGYLWWLSNQGPVLARS
Ga0257160_105175523300026489SoilMGFTRTQIAIAASAAALLVLVFLGYIWWLGNQGPVLA
Ga0179587_1047753113300026557Vadose Zone SoilMGFTRIQIAIAAAAGALLVFGFLGYIWWLSNQGPVLARSEDHDSLTG
Ga0208210_10090813300026683SoilMAFTKAQIGIAVGSGALLVFGFVGYLWWLSNQGPVLARSEEK
Ga0209220_107893213300027587Forest SoilMAFTRNQIGIAVGAGALLVLVFLGYVWWLSNQGPVLARSEDRDP
Ga0209106_115589123300027616Forest SoilMASTRSQIGIAVGAGVLLVLGFLGYVWWLNNQGPVLARSEDHDPLTG
Ga0209007_107227513300027652Forest SoilMAFTKTQIGIAVGAGLLLVAVFLGYVWWLSDQGPVLAR
Ga0209448_1004860813300027783Bog Forest SoilMAFTKTQIGIAVGAGVLLVLVFVGYLLWLSNQGPVLARSDDHD
Ga0209580_1025633023300027842Surface SoilMAVTRTQIGIAVGTGALLVFGFVGYLWWLSNQGPVLARSDDHDPL
Ga0209580_1031627423300027842Surface SoilMAVTRTQIGIAVGAGVLLVLVFVGYLFWLSNQGPVL
Ga0209274_1038976523300027853SoilMAFTRTQIGIAVGAGVLLVAVFLGYVWWLSDQGPVLARSEERDPLSG
Ga0209590_1088347813300027882Vadose Zone SoilMGFTRTQIAIAVGAGALLVFGFLGYIWWLSNQGPVLARSVDHDSLT
Ga0209590_1102333013300027882Vadose Zone SoilMGFTRTQIGIAAGAGVLLVGIFVGYLWWLSNQGPVLA
Ga0209275_1052893023300027884SoilMAFTRTQIAIAVGVGALLVFGFVGYLWWLSNQGPVWARSEDKDPL
Ga0209067_1051945613300027898WatershedsMAFTRTQIGIAVGVGALLVFGFVGYLWWLSNQGPVLARSEDK
Ga0209006_1014637813300027908Forest SoilMAFTRTQIGIAVGAGVLLVGVFVGYIWWLSNQGPV
Ga0302147_1031786223300028566BogMGFTRTQIGIAVGAGALLVFGFLGYIWWLSNQGPVLARSED
Ga0302156_1029157023300028748BogMGFTRIQIGIAVGVAAVLVFGFLGYINWLSNQGPVLARS
Ga0302226_1019184723300028801PalsaMAFTRTQIGIAVGVGALLVFGFLGYIWWLSNQGPVLARSDDHDP
Ga0302218_1002932733300028863PalsaMAFTRTQIGIAVGVGALLVFGFLGYIWWLSNQGPV
Ga0308309_1077820823300028906SoilMGFTRTQIGIAVGVGALMVFGFLGYIWWLSNQGPV
Ga0311368_1028228213300029882PalsaMGFTRTQIGIAVGVAALLVFGFLGYIWWLSDQGPVLARSEDHDP
Ga0311358_1056817623300029915BogMGFTRTQIGIAVGAAALLVFGFLGYIWWLSNQGPVLARSEERDSLSGLP
Ga0311340_1016954753300029943PalsaMAFTRTQIGIAVGAGVLLVAVFLGYVWWLSDQGPVLARSEEHDPLSGLPV
Ga0302179_1002982513300030058PalsaMAFTRTQIGIAVGAGVLLVAVFLGYVWWLSDQGPV
Ga0311370_10012624243300030503PalsaMGFTRTQIGIAVGVAALLVFGFLGYIWWLSDQGPV
Ga0311372_1139812123300030520PalsaMGFTRTQIGIAVGVAALLVFGFLGYIWWLSDQGPVLARSEDHDPLT
Ga0311355_1029501813300030580PalsaMGFTRTQIGIAIGAGALLVLVFLGYIWWLSNQGPVLA
Ga0310038_1024225313300030707Peatlands SoilMAFTRTQIGIAVGAGVLLVLVFVGYLWWLSDQGPVLARSEDHDPLTGLPV
Ga0265746_104175923300030815SoilMAFTRNQIGIAVGAGALLVFGFLGYIWWLNSQGPVLARSP
Ga0170823_1260372713300031128Forest SoilMAATRTQIGIAAGTGALLVAVFLGYLWWLNGQGPV
Ga0302325_1103677833300031234PalsaMGFTRTQIGIAVGAAALLVFGFLGYIWWLSNQGPVLARSEDHDPLTGLPV
Ga0302324_10167295323300031236PalsaMGFTRIQIGIAVGVAAVLVFSFLGYINWLSNQGPVL
Ga0265332_1013581723300031238RhizosphereMAFTRTQIGIAVGAGVLLVGVFVGYLWWLSNQGPVL
Ga0265325_1023948113300031241RhizosphereMAFTRVQIGIAVGAGVLLVGIFVGYLWWLSNQGPVLARSEDHDPLTG
Ga0170820_1554814613300031446Forest SoilMAFTRTQIGIAAGAGVLLVGIFVGYLWWLSNQGPVLARSEDHDPLT
Ga0170818_10181560133300031474Forest SoilMAFTRTQIGIAVGAGTLLVCVFLGYLWWLSNQGPVLA
Ga0310686_10520283823300031708SoilMAFTRTQIAIAVTAGALLVFGFLGYIWWLSNQGPV
Ga0310686_11129023423300031708SoilMGFTRIQIGIAVGVAALLVFGFLGYIWWLSNQGPVLAR
Ga0265314_1033434423300031711RhizosphereMAFTRTQIGIAVGAGVLVVGVFVGYLWWLSNQGPVLARSDDHDPLTGLPV
Ga0307478_1152525113300031823Hardwood Forest SoilMAFTKTQIGIAVGAGALLVLVFVGYLWWLNNQGPVLARSDDHDPL
Ga0307470_1078073513300032174Hardwood Forest SoilMGFTRTQIAIAAAAGALLVFGFLGYFWWLSNQGPVLARSEDHDSL
Ga0335085_1090324913300032770SoilMAFTRTQIGIAAGTGFLLVFVFVGYLWWLSNQGPVLARS
Ga0335080_1198422723300032828SoilMAFTKTQIGIAVGAGALLVFVFVGYLWWLSNQGPVLARS
Ga0335081_1062491813300032892SoilMAFTKTQIGIAVGAGALLVFVFVGYLWWLSNQGPVLARSEDH
Ga0335081_1238095123300032892SoilMAFSKTHIGIAVGAGSLLVLVFVGYLWWLNNQGPVLARSEDKDP
Ga0335072_1147921623300032898SoilMAFTKTQIGIASATAALLVLGFVGYLWWLSSQGPVLARSDE
Ga0335076_1023372413300032955SoilMGSFSKTQIGIAVGTALVLVLAFVGYFWWLSNQGPV
Ga0334790_033114_2_1183300033887SoilMAFTRVQIGIAVGAGVLLVGVFVGYLWWLSNQGPVLARS
Ga0334792_065658_3_1103300033888SoilMAFTRTQIGIAVGTGTLLVMVFVGYLWWLSNQGPVL
Ga0370484_0097940_651_7613300034125Untreated Peat SoilMAFTRTQIGIAVGTGSLLVLVFVGYIWWLSNQGPVLA
Ga0370515_0008491_1_1413300034163Untreated Peat SoilMAFTRTQIGIAVGAGVLLVGVFVGYLWWLSNQGPVLARSEDHDPLTG
Ga0370515_0404977_433_5763300034163Untreated Peat SoilMGFTRIQIGIAVGAASLLVFGFLGYIWWLSKQGPVLARSEERDSLSGL
Ga0370515_0490705_384_5183300034163Untreated Peat SoilMGFTRIQIGIAVGVAALLVCGFLGYINWLSNQGPVLARSEERDTL
Ga0370514_164102_3_1493300034199Untreated Peat SoilMAFTRTQIGISVGAGFLLVAVFLGYVWWLSDQGPVLARSEERAPLSGLP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.