Metagenome / Metatranscriptome Family F066972

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066972
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	82 residues
Representative Sequence	VRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKK
Number of Associated Samples	97
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.97 %
% of genes near scaffold ends (potentially truncated)	91.27 %
% of genes from short scaffolds (< 2000 bps)	89.68 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.921 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.191 % of family members)
Environment Ontology (ENVO)	Unclassified (43.651 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.079 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.55% β-sheet: 0.00% Coil/Unstructured: 42.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF07813	LTXXQ	7.94
PF01042	Ribonuc_L-PSP	3.97
PF00072	Response_reg	3.17
PF00589	Phage_integrase	2.38
PF00313	CSD	2.38
PF03713	DUF305	2.38
PF00486	Trans_reg_C	1.59
PF02148	zf-UBP	1.59
PF13193	AMP-binding_C	0.79
PF01068	DNA_ligase_A_M	0.79
PF00202	Aminotran_3	0.79
PF05231	MASE1	0.79
PF02668	TauD	0.79
PF17201	Cache_3-Cache_2	0.79
PF12536	DUF3734	0.79
PF00903	Glyoxalase	0.79
PF00583	Acetyltransf_1	0.79
PF04392	ABC_sub_bind	0.79
PF00496	SBP_bac_5	0.79
PF01557	FAA_hydrolase	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	31.75
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	3.97
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	2.38
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	1.59
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.79
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.79
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.79
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.79
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.79
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.92 %
Unclassified	root	N/A	15.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.92 %
Unclassified	root	N/A	15.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.92 %
Unclassified	root	N/A	15.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.57 %
Unclassified	root	N/A	15.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	74.60 %
Unclassified	root	N/A	15.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	71.43 %
Unclassified	root	N/A	15.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	69.84 %
Unclassified	root	N/A	15.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	69.84 %
Unclassified	root	N/A	15.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.08 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.38 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.08 %
Bradyrhizobium sp. MOS002	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	1.59 %
Bradyrhizobium sp. CCGUVB23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	0.79 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000700\|JGI12332J11870_100745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1020	Open in IMG/M
3300000706\|JGI12374J11875_103288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	584	Open in IMG/M
3300000721\|JGI12410J11868_101393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	864	Open in IMG/M
3300000724\|JGI12581J11935_100243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1655	Open in IMG/M
3300000729\|JGI12371J11900_1004564	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300000905\|JGI12406J12870_105097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	553	Open in IMG/M
3300000955\|JGI1027J12803_102674001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	514	Open in IMG/M
3300004479\|Ga0062595_102062300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	553	Open in IMG/M
3300004633\|Ga0066395_10864289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300005332\|Ga0066388_107780266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	537	Open in IMG/M
3300005345\|Ga0070692_11089521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	563	Open in IMG/M
3300005615\|Ga0070702_100774743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	739	Open in IMG/M
3300005764\|Ga0066903_100507535	Not Available	2046	Open in IMG/M
3300005764\|Ga0066903_103528843	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300005764\|Ga0066903_103614094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	833	Open in IMG/M
3300005842\|Ga0068858_101869791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	593	Open in IMG/M
3300006057\|Ga0075026_100133323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1262	Open in IMG/M
3300006086\|Ga0075019_10201528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1177	Open in IMG/M
3300006102\|Ga0075015_100244319	Not Available	970	Open in IMG/M
3300006175\|Ga0070712_101296589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	635	Open in IMG/M
3300006354\|Ga0075021_10862855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	587	Open in IMG/M
3300006893\|Ga0073928_10265016	Not Available	1307	Open in IMG/M
3300006893\|Ga0073928_10718507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	696	Open in IMG/M
3300006904\|Ga0075424_100407687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	1450	Open in IMG/M
3300010046\|Ga0126384_11202467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	699	Open in IMG/M
3300010373\|Ga0134128_11518244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	737	Open in IMG/M
3300010376\|Ga0126381_102488007	Not Available	742	Open in IMG/M
3300010376\|Ga0126381_103222692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300010396\|Ga0134126_11129309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	873	Open in IMG/M
3300012971\|Ga0126369_11751596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	710	Open in IMG/M
3300012971\|Ga0126369_13292462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	529	Open in IMG/M
3300014325\|Ga0163163_12196850	Not Available	611	Open in IMG/M
3300015374\|Ga0132255_103210886	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300016270\|Ga0182036_10527849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	938	Open in IMG/M
3300016270\|Ga0182036_11573276	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300016294\|Ga0182041_12322634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	502	Open in IMG/M
3300016341\|Ga0182035_10566515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300016357\|Ga0182032_10388283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1126	Open in IMG/M
3300016371\|Ga0182034_11665574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300016404\|Ga0182037_10116529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1954	Open in IMG/M
3300016404\|Ga0182037_10250085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1402	Open in IMG/M
3300016404\|Ga0182037_10463021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1056	Open in IMG/M
3300016404\|Ga0182037_10912863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	762	Open in IMG/M
3300016404\|Ga0182037_11989151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	521	Open in IMG/M
3300016422\|Ga0182039_11330753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	651	Open in IMG/M
3300016422\|Ga0182039_11861950	Not Available	552	Open in IMG/M
3300016445\|Ga0182038_10090498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2191	Open in IMG/M
3300016445\|Ga0182038_11397811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	627	Open in IMG/M
3300017937\|Ga0187809_10047265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1387	Open in IMG/M
3300017974\|Ga0187777_10385421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	968	Open in IMG/M
3300017974\|Ga0187777_10636835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	753	Open in IMG/M
3300020580\|Ga0210403_10217901	Not Available	1566	Open in IMG/M
3300020580\|Ga0210403_10701735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	811	Open in IMG/M
3300020581\|Ga0210399_10644666	Not Available	874	Open in IMG/M
3300021178\|Ga0210408_10748679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	767	Open in IMG/M
3300021401\|Ga0210393_10187402	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300021407\|Ga0210383_10575125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	972	Open in IMG/M
3300021560\|Ga0126371_11045559	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300021560\|Ga0126371_12135495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	675	Open in IMG/M
3300022507\|Ga0222729_1077182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	500	Open in IMG/M
3300022557\|Ga0212123_10125431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2032	Open in IMG/M
3300024225\|Ga0224572_1083822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	588	Open in IMG/M
3300025933\|Ga0207706_10256769	All Organisms → cellular organisms → Bacteria → Proteobacteria	1526	Open in IMG/M
3300026041\|Ga0207639_11495315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	634	Open in IMG/M
3300026823\|Ga0207759_111614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300026830\|Ga0207861_101655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1564	Open in IMG/M
3300026849\|Ga0207804_107155	Not Available	1066	Open in IMG/M
3300026862\|Ga0207724_1001308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2557	Open in IMG/M
3300026868\|Ga0207818_1011470	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300026869\|Ga0207821_1001927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2580	Open in IMG/M
3300026887\|Ga0207805_1000790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4301	Open in IMG/M
3300026890\|Ga0207781_1001165	All Organisms → cellular organisms → Bacteria → Proteobacteria	3712	Open in IMG/M
3300026896\|Ga0207730_1001725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2473	Open in IMG/M
3300026909\|Ga0207858_1002316	Not Available	1997	Open in IMG/M
3300026941\|Ga0207741_1001216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3490	Open in IMG/M
3300026941\|Ga0207741_1006550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1399	Open in IMG/M
3300026990\|Ga0207824_1000834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4657	Open in IMG/M
3300027000\|Ga0207803_1005622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1901	Open in IMG/M
3300027043\|Ga0207800_1000375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13100	Open in IMG/M
3300027069\|Ga0208859_1018788	Not Available	783	Open in IMG/M
3300027330\|Ga0207777_1050926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	734	Open in IMG/M
3300029636\|Ga0222749_10758536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	531	Open in IMG/M
3300030707\|Ga0310038_10334380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	674	Open in IMG/M
3300031057\|Ga0170834_104643366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1046	Open in IMG/M
3300031544\|Ga0318534_10194699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1171	Open in IMG/M
3300031561\|Ga0318528_10755621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	520	Open in IMG/M
3300031564\|Ga0318573_10423602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	716	Open in IMG/M
3300031572\|Ga0318515_10383446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	753	Open in IMG/M
3300031573\|Ga0310915_11172541	Not Available	532	Open in IMG/M
3300031668\|Ga0318542_10342854	Not Available	768	Open in IMG/M
3300031668\|Ga0318542_10657351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	547	Open in IMG/M
3300031719\|Ga0306917_10745884	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300031723\|Ga0318493_10417081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	736	Open in IMG/M
3300031744\|Ga0306918_10653502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	823	Open in IMG/M
3300031744\|Ga0306918_11173605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	593	Open in IMG/M
3300031781\|Ga0318547_10838385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	573	Open in IMG/M
3300031792\|Ga0318529_10156947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1048	Open in IMG/M
3300031845\|Ga0318511_10545602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	538	Open in IMG/M
3300031890\|Ga0306925_10306676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1707	Open in IMG/M
3300031890\|Ga0306925_11046182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	829	Open in IMG/M
3300031890\|Ga0306925_11211727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	756	Open in IMG/M
3300031890\|Ga0306925_11226414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	750	Open in IMG/M
3300031912\|Ga0306921_10745595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1122	Open in IMG/M
3300031912\|Ga0306921_11531828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	727	Open in IMG/M
3300031942\|Ga0310916_10158122	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300031942\|Ga0310916_10755257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	821	Open in IMG/M
3300031942\|Ga0310916_11091546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	663	Open in IMG/M
3300031946\|Ga0310910_10776419	Not Available	755	Open in IMG/M
3300031947\|Ga0310909_10461597	Not Available	1066	Open in IMG/M
3300031959\|Ga0318530_10431639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300032001\|Ga0306922_10309185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1697	Open in IMG/M
3300032001\|Ga0306922_10915345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	910	Open in IMG/M
3300032042\|Ga0318545_10380707	Not Available	509	Open in IMG/M
3300032051\|Ga0318532_10239218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	644	Open in IMG/M
3300032055\|Ga0318575_10142886	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300032076\|Ga0306924_10658000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1180	Open in IMG/M
3300032076\|Ga0306924_11466571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	725	Open in IMG/M
3300032076\|Ga0306924_12220427	Not Available	559	Open in IMG/M
3300032076\|Ga0306924_12484900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	520	Open in IMG/M
3300032089\|Ga0318525_10290855	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300032091\|Ga0318577_10548005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	550	Open in IMG/M
3300032828\|Ga0335080_11155798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	780	Open in IMG/M
3300033289\|Ga0310914_11001581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	736	Open in IMG/M
3300033289\|Ga0310914_11191052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	663	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.44%
Host-Associated	Host-Associated	5.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.10%
Aquatic	Environmental → Aquatic	6.35%
Plants	Host-Associated → Plants	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.10%
Sediment	Environmental → Aquatic → Sediment	3.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.38%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.32%
Loam	Environmental → Terrestrial → Soil → Loam	25.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.17%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.17%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	22.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.17%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000700	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56	Environmental	Open in IMG/M
3300000706	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65	Environmental	Open in IMG/M
3300000721	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41	Environmental	Open in IMG/M
3300000724	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29	Environmental	Open in IMG/M
3300000729	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35	Environmental	Open in IMG/M
3300000905	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026830	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 33 (SPAdes)	Environmental	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300026862	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12332J11870_1007451	3300000700	Tropical Forest Soil	MCGASQKGRPVVRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKKSLCEAKALLETDEVA*
JGI12374J11875_1032882	3300000706	Tropical Forest Soil	MRSAIPIFLAILVLATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASAS
JGI12410J11868_1013931	3300000721	Tropical Forest Soil	MCGASQKGRPVVRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKKSLCEAKALLETDEV
JGI12581J11935_1002431	3300000724	Tropical Forest Soil	MCGASQKGRPVVRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASA
JGI12371J11900_10045642	3300000729	Tropical Forest Soil	VRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKKSLCEAKALLETDEVA*
JGI12406J12870_1050971	3300000905	Tropical Forest Soil	VSSAILIFFAILAFATTPAHAQGTWLETRMIRAICSSEATPVANTDRLARRLNLTDPQKAALKDLTERFCVCR
JGI1027J12803_1026740012	3300000955	Soil	MRSAILIFLAILAVATTPARAQGTWVETRFARAICGGGAAPVANTDGLAKRLKLTDPQKAALKDLADASASADA
Ga0062595_1020623002	3300004479	Soil	MRSAILIFLAILAFATTPARAQGSWLETRFARAICSGGATPVANTDGLARRLKLTDPQKAALKDLTEASASADASAKKSLCADKDLSTTPGR
Ga0066395_108642891	3300004633	Tropical Forest Soil	VRSAIPIFLAILAFETTPARAQGTWLETSMIRAICSSKATPAANTDRLAKRLNLTDPQRAALKDLTDASVSADASAKTSLCADKPDFSTTPGRMEFAEKM
Ga0066388_1077802661	3300005332	Tropical Forest Soil	VRSAIPIFLAILAFATTPARAQGTWLETSMIRAICSSKATPAANTDRLAKRFNLTDPQKAGLKDLTDASVSADASAKTS
Ga0070692_110895212	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRSAILIFLAILAVATTPARAQGTWVETRFARAICGGGAAPVASTDGLAKRLKLTDRQKVALKDLADAS
Ga0070702_1007747432	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSGASQKGRPVVRSATLIFFVFLAFATTPARAQGTWLETRITRAICSSEVTPVANTDRLARRLNLTDSQKAALKDMIDASASADASAKKSLCADKP
Ga0066903_1005075351	3300005764	Tropical Forest Soil	VRSAILIFLAILAFATTPARAQGTWLETRMTKAICSSEATPVANTDGLARRLKLTDPQKAALKDLTDASASAD
Ga0066903_1035288431	3300005764	Tropical Forest Soil	VRSAILIFPAILAFGMTPARAQGTWLETRMLRAICNSEATPVANTDRLAKRLDLTDSQKAALKDLTDASASADA
Ga0066903_1036140941	3300005764	Tropical Forest Soil	VRSAILILLAILVFATTPVRAQGTWLETRMIKGICSGGTTPVADTDRLASRLNLTDAQKAALKNLTDAAASADATA
Ga0068858_1018697911	3300005842	Switchgrass Rhizosphere	MRSAIRIVLAISAFAITPARTQGTWLETRMTRAICSGGATPVVNTDGLARRLKLTDPQKAALKDLTEASASADASAKKSLC
Ga0075026_1001333231	3300006057	Watersheds	VRSAILIVLASLAFVTTPARAQGTWLERKMTNAICSSEATPATNTDRLASRLKLTDPQKAALKDLTAASA
Ga0075019_102015281	3300006086	Watersheds	VRSAILIFLAILAFATTPARAQGTWLETRLIKAICSDKTTPAANTDRLAKRLNLTDLQKAALKDLADASASADASAKTSLCADKPDFTTT
Ga0075015_1002443192	3300006102	Watersheds	VRSAILIFLAILAFATTPARAQGTWLETRMIRAICSSKATPAADTGRLAKRLSLTDPQKAALNDLSDASASADASA
Ga0070712_1012965891	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSGASQEGRSVVRSAILFFLAILVFATTPARAQGTWLEARMTRAICSGEATPVANTDGLARRLRLTDPQKAALKD
Ga0075021_108628552	3300006354	Watersheds	VRSAILIFLAILAFATTPARAQGTWLETRITRAICSSEGTPVANTDRLARRLKLTDPQKAALKALTDASASADASAKK
Ga0073928_102650161	3300006893	Iron-Sulfur Acid Spring	MGSYVVRSAILIFLAILAFATTRAHAQGTWLETRLIKAVCSSKATQPADTDRLAKRLNLTDPQKAALKDLAEASAAADTTAKTS
Ga0073928_107185072	3300006893	Iron-Sulfur Acid Spring	VRFAILIFLAILGFATTPARAQGTWLEARMIGAICSSKVTSAANTDRLAKRLNLTDPQKAALKDLSDASASADASAKTSLCA*
Ga0075424_1004076871	3300006904	Populus Rhizosphere	VRSAILIFLIILAFATTSARAQGTWLETRVTRAICSSETTPVANADRLARRLKLTDPQKAALKDLTDASASADASAKK
Ga0126384_112024672	3300010046	Tropical Forest Soil	MRSAILIFVAILAFATTPARAQGEARIIKAICNSEGTPVANTERLARRLNLADPQKAMLKNLTDASASADA
Ga0134128_115182442	3300010373	Terrestrial Soil	MSGASQKGRPVVRSATLIFFVFLAFATTPARAQGTWLETRITRAICSSEVTPVANTDRLARRLNLTDSQKAALKDM
Ga0126381_1024880071	3300010376	Tropical Forest Soil	VRSAILILVASLAFATTPARAQGTRLETKLIGAICSSGATSVANTDRLARRLNLSDPQKAALKDLTDGSASADAAAKKSLCA
Ga0126381_1032226922	3300010376	Tropical Forest Soil	MSGASQQGRSVVRSAILIFLAILAFAATPARAQGTWLETRMTTAICSSKATPANTDRLARRLNLTDPQKAALKDLTDASASADASAKKLLCADKPDLST
Ga0134126_111293092	3300010396	Terrestrial Soil	MSGASQKGRPVVRAATLIFFVFLAFATTPARAQGTWLETRITRAICSIEVTPVANTDRLARRLNLSEAALKDMIDASA
Ga0126369_117515962	3300012971	Tropical Forest Soil	MIFLAILAFATTPARAQGTWLETRMTSAICYGEATPVANTDGLARRLKLTDAQKASLKDLTDASASADASAKKSLSAVQARSFYDAGPNGVR
Ga0126369_132924621	3300012971	Tropical Forest Soil	VRSAIPIFLAILAFATTPARAQGTWLETSMIRAICSSKATPTANTDRLAKRLNLTDPQKAALKDLTDASASADASAKSSLCADK
Ga0163163_121968501	3300014325	Switchgrass Rhizosphere	MQRSAFEIRPLVFCEALRKIRRSVVRSAILIFLAILACAMPAHAQGTWLETRLIRAVCSSEVTPVANTDRLAKRLNLREPQKEALKDLADASASADTKAKTSLCADKPDLSTTPGRMAFA
Ga0132255_1032108862	3300015374	Arabidopsis Rhizosphere	VRLANPFFLSILALATTPAHAQGTWLEKRMTAAICSSDTTPAANTDRLVRRLNLSDPQKAALKELTDASASADASAKKSLCADKPDLS
Ga0182036_105278491	3300016270	Soil	VRSAILIYLAILAFATMPARAQGTWLETRMIKGICSGEATPVANTDRLASRLKLTDPQKAALKNLTDAAASA
Ga0182036_115732762	3300016270	Soil	MSSTIVIFVVFLAFATTPARAQGTWLETRLIRAVCNSKETSAANTDRLAKRLNLTDPQKAALKDLAEASAAA
Ga0182041_123226341	3300016294	Soil	VRSAILIFLAMLAFATTPARAQGTWLETRMIRGICSSEAAPVANTDRLASPLHLPVAPRAALTDLADASVSADASAKKSLCADKPDFSTT
Ga0182035_105665153	3300016341	Soil	VRSAILILLAILAFATTPARAQGTWLETRMIGAICSSEAARVANSDPLAKRLNLNDPQKAALKDLTDASATADAA
Ga0182032_103882833	3300016357	Soil	VRSAILIFLAILALATTPARAQGTWLETKMIKGICSSEATPVADTDRLARRLNLTDPQRATLKDLTDAAASAATSAKKSLCA
Ga0182034_116655741	3300016371	Soil	LLRADVWRLAKGESVVRSAILIFLAILAFATTPARAQGTWLETRMIRGICSSEAAPVANTDRLASRLNLTDPQKA
Ga0182037_101165293	3300016404	Soil	MRWAILIFLAVLTFATTPARAQGTWLERKMISGICSSEATPVANTDRLASRLNLTDPQKAALKDLSEASAAADASAKKSLCADKPDFSTT
Ga0182037_102500854	3300016404	Soil	LAPPKKGSSVVRSAMLIFLAILAFATTSARAQGTWLETRMIRGICGSEAAPVANTDRLARRLNLTDPQKAALKDLTDASASADAFCEEVAMR
Ga0182037_104630211	3300016404	Soil	VRSAIFIFSGILAFATTPARAQGTWLETKMISAICSSDATPATNTDRLAKRLSLTDAQKAALKDLNDASASADAS
Ga0182037_109128631	3300016404	Soil	VRLAILIFLAILAFATTPARAQGTWLETKMIRGICSSEATPVANTDRLASRLNLTDPQKAALKDLTDASASADASAKKSLCADKPDFSTTPA
Ga0182037_119891512	3300016404	Soil	VRLAILFFVAVVVFATTPARAQGTWLKTRMTRAICSGEATPVANTDGLARRLRLTDPQKAALKDLTDASASADTSAK
Ga0182039_113307532	3300016422	Soil	MRWAILFFLAVLTFATTPARAQGTWLERKMISGICSSEATPVANTDRLASRLNLTDPQKAALKDLSEASAAADASAKKSLCADKPDFSTT
Ga0182039_118619502	3300016422	Soil	VRSAILIFLALLVFAATPARAQPEWLKTRMMGAMCNGRSTPADNTDRLAKRLNLTDPQKAALKDLSDASASAAASAKT
Ga0182038_100904983	3300016445	Soil	MRWGILIFLAVLTFATTPARAQGTWLERKMISGICSSEATPVANTDRLASRLNLTDPQKAALKDLTDASASADASAKKSLCA
Ga0182038_113978112	3300016445	Soil	VRSAMLIFLAILAFATTSARAQGTWLETRMIRGICGSEAAPVANTDRLARRLNLTDPQKAALKDLTD
Ga0187809_100472651	3300017937	Freshwater Sediment	MRSQRCTEILSRASVWRLANGRSVLRPAILILLAIPAFAATPARSQGTWLETRITRAICSSDLTPVANTDRLARKLNLTDRQKEMLKEMIEASASADVSAKEALCADK
Ga0187777_103854212	3300017974	Tropical Peatland	VRSAILIFLGTLAFATAPARAQGTWLETRMIKAICNSEATPIANTDRVARRLNLTDPQKAALKDLIDASASA
Ga0187777_106368351	3300017974	Tropical Peatland	VRSAILIFLATLALATTPARAQGTWLETRMIKEICNSEPTPTTNADRVARRLNLTDPQKAALKDLIDASASANA
Ga0210403_102179013	3300020580	Soil	VRSAILIFLAILAFATTPARAQGTWLETRLIRAVCSSKETSAANTDRLAKRLNLTDPQKVALKDLAEASAAAD
Ga0210403_107017351	3300020580	Soil	VRSAILIFLAILGFATTPARAQGTWLETRMIKAICSSEATPAADTGRLAKRLNLTEPQKAALKDLSDASASADVSAKASLCADKTDLSTTL
Ga0210399_106446661	3300020581	Soil	MSGLAKGGSVVHSAILIFLAILAFATTPARAQGTWLETRLIKAVCSGEATPAANTDRLAKRLNLTDPQKAALKDLADASASADASAKTSLCADK
Ga0210408_107486791	3300021178	Soil	LLRADVWPRKREAVVRLAILIFLVILAFVTTPARAQGTWLETRITRAICSGEVTPVANVDRLARRLNLTDSQKAALK
Ga0210393_101874023	3300021401	Soil	MGSYVVRSAILIFLAILAFATTRAHAQGTWLETRLIKAVCSSKATQPADTDRLAKRLNLTDPQKAALKDLAEASAAADTTAK
Ga0210383_105751251	3300021407	Soil	VRSAILIFLAILAFATTPARAQDTWLETRITRAICSGELTPVANTERLARRLNLTDPQKAALKDMIDASASADASPD
Ga0126371_110455593	3300021560	Tropical Forest Soil	MRWAILIFLAVLTFATTPARAQGTWLERKMISGICSSEATPVANTDRLASRLNLTDPQKAALKDLSEASAAADASAKKSLC
Ga0126371_121354952	3300021560	Tropical Forest Soil	VRSEISIFFVILAFATTPAQAQGTWLETRMISAMCSSEAKPVTNTDRLARRLDLTDSQKAALKDMIDAS
Ga0222729_10771821	3300022507	Soil	MGSYVVRSAILIFLAILAFATTPARAQGTWLEKRMIAAICSSKATPAADTGRLAKRLSLTEPQKAALKDLSDASTSAEASAKTSLCADKTDLSTTPDRIVFAQKM
Ga0212123_101254314	3300022557	Iron-Sulfur Acid Spring	VRSAILIFLAILAFATTPARAQGTWLETRMIRAICSSKATPAADTGRLAKRLNLTEPQKAALKDLSDASASADASAKT
Ga0224572_10838221	3300024225	Rhizosphere	VRSAILIFVAILAFATTPARAQGTWLEKRMIAAICSSKATPAADTGRLAKRLSLTDPQKAALKDFCVCRSLGEGVAMR
Ga0207706_102567693	3300025933	Corn Rhizosphere	VRSATLIFFVFLAFATTPARAQGTWLETRITRAICSSEVTPVANTDRLARRLNLTDSQKAALKDMIDA
Ga0207639_114953151	3300026041	Corn Rhizosphere	MRSAILIFLAILAVATTPARAQGTWVETRFARAICGGGAAPVASTDGLAKRLKLTDRQKVALKDLADASASADA
Ga0207759_1116141	3300026823	Tropical Forest Soil	VRSAILIFLAILAFATTARAQSTWLERSTVSAICSRTASPAAGERLARRLNLTDPQKSALRDLTDAFASADASAKKSLCADK
Ga0207861_1016551	3300026830	Tropical Forest Soil	VRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKKSLCEAKALLETDEVA
Ga0207804_1071552	3300026849	Tropical Forest Soil	VSSAILIFFAILAFATTPAHAQGTWLETRMIRAICSSEATPVANTDRLARRLNLTDPQKAALKDLTDASAS
Ga0207724_10013081	3300026862	Tropical Forest Soil	MCGASQKGRAVVRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKKSLCADK
Ga0207818_10114701	3300026868	Tropical Forest Soil	MRSAIPIFLAILVLATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDA
Ga0207821_10019271	3300026869	Tropical Forest Soil	MSGASQKGRSVVSSAILIFFAILAFATTPAHAQGTWLETRMIRAICSSEATPVANTDRLARRLNLTDPQKAALKDLTDASASAAASAQKSL
Ga0207805_10007901	3300026887	Tropical Forest Soil	VRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDA
Ga0207781_10011651	3300026890	Tropical Forest Soil	MRSAIPIFLAILVLATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHA
Ga0207730_10017253	3300026896	Tropical Forest Soil	MSGASQKGRSVVSSAILIFFAILAFATTPAHAQGTWLETRMIRAICSSEATPVANTDRLARRLNLTDPQKAALKDLTD
Ga0207858_10023161	3300026909	Tropical Forest Soil	VSLAILIFFAILAFATTPAHAQGTWLETRMIRAICSSEATPVANTDRLARRLNLTDPQKAALKDLTDASASAAASAQK
Ga0207741_10012164	3300026941	Tropical Forest Soil	VSSAILIFFAILAFATTPAHAQGTWLETRMIRAICSSEATPVANTDRLARRLNLTDPQKAALKDLTDASASAAASAQKSLCA
Ga0207741_10065503	3300026941	Tropical Forest Soil	MRSAIPIFLAILVLATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHAFCEEVSMR
Ga0207824_10008341	3300026990	Tropical Forest Soil	VRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKK
Ga0207803_10056221	3300027000	Tropical Forest Soil	MCGASQKGRPVVRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKD
Ga0207855_10305751	3300027039	Tropical Forest Soil	VRSAILIFLAILAFATTARAQSTWLERSTVSAICSRTASPAAGERLARRLNLTDPQKSALRDLTDAFASADASAKKSLCA
Ga0207800_100037516	3300027043	Tropical Forest Soil	VSSAILIFFAILAFATTPAHAQGTWLETRMIRAICSSEATPVANTDRLARRLNLTDPQKAALKDLTDASASAAASAQKSL
Ga0208859_10187882	3300027069	Forest Soil	VRSAIPIFLAILAFATTPARAQGTWLETRLIKAICSDKTTPAANTDRLAKRLNLTDLQRAALKDLADASASADASAKTSLCADK
Ga0207777_10509262	3300027330	Tropical Forest Soil	MRSAILIFLAILVLATTPARAQGTWLETRMTKAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKKSLCADKP
Ga0222749_107585361	3300029636	Soil	VRSAILIFLAILAFATTPARAQGTWLETRMIRAICSSKATPAADTGRLAKRLSLTEPQKAALKDLSDA
Ga0310038_103343802	3300030707	Peatlands Soil	VRSAILIFLAILAFATTPARAQGTWLETRLIKAICSDKTTPAANTDRLAKRLNLTDLQRAALKDLADASASADVSAKTSLCADKPD
Ga0170834_1046433661	3300031057	Forest Soil	LRADVWRLAKKGRPVVRSAILIFLVILTFATTPARAQGTWLETRITRVICSGEVTPVANTDRLARRLNLTDPQKAALKDMIDASASAD
Ga0318534_101946993	3300031544	Soil	MRWGILIFLAVLTFATTPARAQGTWLERKMISGICSSEATPVANTDRLASRLNLTDPQKAALKDLSEASAAADASAKKS
Ga0318528_107556211	3300031561	Soil	VRLAILIFLAILAFATTPARAQGTWLETKMIRGICSSEATPVANTDRLASRLNLTDPQKAALKDLTDASVSADASAKKSLCADKPDFSTTPGR
Ga0318573_104236021	3300031564	Soil	MSGASQKGRSVVRSAILIFLAMLAFATTPARAQGTWLETRMIRGICSSEAAPVANTDRLASRLNLTDPQKAALKD
Ga0318515_103834462	3300031572	Soil	MRSAILIFLAILTFATTPARAQGTWLERRMISGICSSEATPVVSTDRLASRLNLTNPQKAALKDLADASASAD
Ga0310915_111725411	3300031573	Soil	MRLAILIFVAILALATTQARAQGTSLETRMIKAICSSKATPVANTDRLARRLNLSDSQKAMLKDLTDTSASAAASAKKSLCADKMDFSTTPSRM
Ga0318542_103428542	3300031668	Soil	VRSAILIFFVILAFATTAARAQGTWLETKMIRGICSSEATPVANTDRLASRLNLTDPQKAALKDLTDASVSADASAKKSLCADKPDFSTTPGRM
Ga0318542_106573512	3300031668	Soil	VRSAMLIFLAILAFATTSARAQGTWLETRMIRGICGSEAAPVANTDRLARRLNLTDPQKAALKDLTDASASADASAKKS
Ga0306917_107458842	3300031719	Soil	VRSAILFFLATLAFATTPARAQSTWLETRMIKEICNSEPTPTTNTDRMARRLKLTDPQKAALKDLIDAYASAIASAKASLCAAKPDL
Ga0318493_104170811	3300031723	Soil	MRSAILFFLAILTFATTPARAQGTWLERRMIGGICSSEATPVVSTDRLASRLNLTNPQKAALKDLADAS
Ga0306918_106535022	3300031744	Soil	VRSAILIFLGTLAFATAPARAQGTWLETRMIKAICNSEATPIANTDRVARRLNLTDPQKTAERLDRRFCVCQRIDQGVAMR
Ga0306918_111736051	3300031744	Soil	VRSAMLIFLAILAFATTSARAQGTWLETRMIRGICGSEAAPVANTDRLARRLNLTDPQKAALKDLTDASASADASAKKSLCADKPDFSTTPGRM
Ga0318547_108383851	3300031781	Soil	VRSAILIFLSILAFATTPARAQGTWLETRMIKGICSSEATPVADTDRLARRLNLTDPQKAALKNLTDAAASANATAQK
Ga0318529_101569471	3300031792	Soil	VRSAILIFLAILAFATTPARAQGTWLETRMIKGICSNEATPVANTDRLARRLNLTDPQKAALKNLTDAAASADATAKQS
Ga0318511_105456021	3300031845	Soil	VRLAILIFLAILAFATTPARAQGTWLETKMIRGICSSEATPVANTDRLASRLNLTDPQKAALKDLTDASVSADASAKKS
Ga0306925_103066762	3300031890	Soil	MLIFLAILAFATTSARAQGTWLETRMIRGICGSEAAPVANTDRLARRLNLTDPQKAALKDLTDASASADAFCEEVAMR
Ga0306925_110461821	3300031890	Soil	MSSTIVIFVVFLAFATTPARAQGTWLETRLIRAVCNSKETSAANTDRLAKRLNLTDPQKAALKDLAEASAAAGTTAKTSICADKHYLSTTPGRLAF
Ga0306925_112117271	3300031890	Soil	VRLAILFFVAVVVFATTPARAQGTWLKTRMTRAICSGEATPVANTDGLARRLRLTDPQKAALKDLTDASASADTSAKKSLCAD
Ga0306925_112264142	3300031890	Soil	VRSAILIFFAIPAFATTPAHAQGTWLETRMIRAICSSEATPVANTDRLARRLNLTDPQKAALKDLTDASASAATSAQKSLCAD
Ga0306921_107455952	3300031912	Soil	MSGASQKGRSVVRSAILIYLAILAFATMPARAQGTWLETRMIKGICSGEATPVANTDRLASRLKLTDPQKAALKNLTDAAASADASAKKSLCADKLDLSTTPGRMAF
Ga0306921_115318281	3300031912	Soil	VRSAMLIFLAILAFATTSARAQGTWLETRMIRGICGSEAAPVANTDRLARRLNLTDPQKAALKDLTDASASADAFCEEVAMR
Ga0310916_101581221	3300031942	Soil	MRLAILIFVAILALATTQARAQGTSLETRMIKAICRSKATPVANTDRLARRLNLSDSQKAMLKDLTDTSASAAASAKK
Ga0310916_107552572	3300031942	Soil	LLRADVWRLAKKRSVVRSATLIFLAILAFATTPARAQGTWLETRMIRGICNSEATAVANTDRLASRLNLTDPQKAALKDLTDASASADASAKKSLCADKPDFST
Ga0310916_110915462	3300031942	Soil	VRSAMLIFLAILAFATTSARAQGTWLETRMIRGICGSEAAPVANTDRLARRLNLTDPQKAALKDLTDASASADASAKKSLCADKPDFS
Ga0310910_107764191	3300031946	Soil	VRLAILIFLAILAFATTPARAQGTWLETKMIRGICSSEATPVANTDRLASRLNLTDPQKAALKDLTDASAS
Ga0310909_104615972	3300031947	Soil	VRSAIAIFLAILAFATTPARGQGTWLETKMISSICSSEATPAANTDRLAKRLNLTDPQKAALKALTDSSASA
Ga0318530_104316391	3300031959	Soil	VRSAILIFLAILAFATTPARAQGTWLETRMIKGICSNEATPVANTDRLARRLNLTDPQKAALKNLTDAAASADATAK
Ga0306922_103091851	3300032001	Soil	VRSAILIFLAILAFATTPARAQGTWLETRMIKGICSNEATPVANTDRLARRLNLTDPQKAALKNLTDAAASADATAKK
Ga0306922_109153451	3300032001	Soil	MRSAILIFLTILAFATTPARAQGTWLETRFARAICSGGTAPVANTDGLAKRLKLTDPQKAALKDLTDASASADASAKKSLC
Ga0318545_103807071	3300032042	Soil	VRSAIAIFLAILAFATTPARGQGTWLETKMISSICSSEATPAANTDRLAKRLNLTDPQKAALKALTDSSASAEASAK
Ga0318532_102392181	3300032051	Soil	MRSAILIFLAILTFATTPARAQGTWLERRMISGICSSEATPEVSTDRLASRLNLTNPQKAALKDLADASASADASA
Ga0318575_101428862	3300032055	Soil	VRSAILIFLAILAFATTARAQSTWLERSTVSAICSRTASPAAGERLARRLNLTDPQKSALRDLTDAFASADTSAKK
Ga0306924_106580001	3300032076	Soil	VRSAILIFLAMLAFATTPARAQGTWLETRMIRGICSSEAAPVANTDRLASRLNLTDPQKAALKDLADAS
Ga0306924_114665711	3300032076	Soil	MSGASKNGRVVVHSAIFIFACILAFATTPARAQGTWLETKMISAICSGDATPATNTDRLAKRLSLTDAQKAALKDLNDASASADASARKSLCADKPDLS
Ga0306924_122204272	3300032076	Soil	VRSAILIFLATLAFATTPARAQTWLETRMIRSICNSQATPAANTDRLARRLNLIDAQKAALKDLTEASTSADGSAKKSLCADK
Ga0306924_124849001	3300032076	Soil	VRSAILIFLAMLAFATTPARAQGTWLETRMIRGICSSEATPVANTDRLASRLNLTDPQKAALKDLTDASASADASAKKSLCAEKPDFSTTPG
Ga0318525_102908552	3300032089	Soil	MRWGILIFLAVLTFATTPARAQGTWLERKMISGICSSEATPVANTDRLASRLNLTDPQKAALKDLSEASAAADASA
Ga0318518_104220862	3300032090	Soil	MSLWVGIACWHRCMIGRCSAILFFTAILAFATTQARAQGTWLETRVTRAICSSEGTPVANTDRLVRRLNLSDPQKAALKDLTDSSASADA
Ga0318577_105480052	3300032091	Soil	MRSAILIFLAILTFATTPARAQGTWLERRMIGGICSSEATPVVSTDRLASRLNLTNPQKAALKDLADASASADASAKKSPCADKPDFSTTPGR
Ga0335080_111557981	3300032828	Soil	VRSAILIFLAILAFATTPARAQGTWLETRMIRTICSSKATPAGNTDRLAKRLNLTDPQKEALKDLTDASASAAASAKTALCADKP
Ga0310914_110015812	3300033289	Soil	VRSAIPMFLAILAFVTTPACAQGTWLETSMIRAICSNKTTPAANTDRLAKRLNLTDPQKAALKDLTDASV
Ga0310914_111910522	3300033289	Soil	AENIVVEGRCLAPPKKGSSVVRSAMLIFLAILAFATTSARAQGTWLETRMIRGICGSEAAPVANTDRLARRLNLTDPQKAALKDLTDASASADAFCEEVAMR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066972

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences