Metagenome / Metatranscriptome Family F066934

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066934
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	72 residues
Representative Sequence	MTTAVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRNMS
Number of Associated Samples	86
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.57 %
% of genes near scaffold ends (potentially truncated)	27.78 %
% of genes from short scaffolds (< 2000 bps)	84.13 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.302 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.809 % of family members)
Environment Ontology (ENVO)	Unclassified (47.619 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.698 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00196	GerE	30.95
PF00126	HTH_1	24.60
PF03466	LysR_substrate	15.87
PF13404	HTH_AsnC-type	2.38
PF07730	HisKA_3	2.38
PF07690	MFS_1	2.38
PF01037	AsnC_trans_reg	2.38
PF01061	ABC2_membrane	1.59
PF03869	Arc	1.59
PF13796	Sensor	1.59
PF02771	Acyl-CoA_dh_N	0.79
PF16859	TetR_C_11	0.79
PF02452	PemK_toxin	0.79
PF13738	Pyr_redox_3	0.79
PF00005	ABC_tran	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	2.38
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	2.38
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	2.38
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	2.38
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.79
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.30 %
Unclassified	root	N/A	12.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.30 %
Unclassified	root	N/A	12.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.30 %
Unclassified	root	N/A	12.70 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.54 %
Unclassified	root	N/A	12.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.54 %
Unclassified	root	N/A	12.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.62 %
Unclassified	root	N/A	12.70 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.70 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.56 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.79 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.70 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	5.56 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.70 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	5.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	0.79 %
Streptoalloteichus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Streptoalloteichus	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.70 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.56 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Novosphingobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp.	0.79 %
Streptoalloteichus hindustanus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Streptoalloteichus → Streptoalloteichus hindustanus	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001461\|JGI12698J15209_1011401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300001661\|JGI12053J15887_10289845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300002245\|JGIcombinedJ26739_100878579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300005435\|Ga0070714_100120124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2337	Open in IMG/M
3300005437\|Ga0070710_11433731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	517	Open in IMG/M
3300005541\|Ga0070733_10815668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	627	Open in IMG/M
3300005602\|Ga0070762_10822022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300005602\|Ga0070762_11042520	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005610\|Ga0070763_10063475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1788	Open in IMG/M
3300005610\|Ga0070763_10124183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1326	Open in IMG/M
3300005921\|Ga0070766_10548889	Not Available	772	Open in IMG/M
3300006041\|Ga0075023_100378809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300006176\|Ga0070765_101682747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300007982\|Ga0102924_1058364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2193	Open in IMG/M
3300010379\|Ga0136449_103287019	Not Available	622	Open in IMG/M
3300010386\|Ga0136806_1065291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2052	Open in IMG/M
3300010858\|Ga0126345_1255741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	626	Open in IMG/M
3300010858\|Ga0126345_1294151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	951	Open in IMG/M
3300010859\|Ga0126352_1052912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300010865\|Ga0126346_1066627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1475	Open in IMG/M
3300010865\|Ga0126346_1371778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300010865\|Ga0126346_1423269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1036	Open in IMG/M
3300010866\|Ga0126344_1060156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	917	Open in IMG/M
3300010867\|Ga0126347_1563933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1513	Open in IMG/M
3300010869\|Ga0126359_1013921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	554	Open in IMG/M
3300010869\|Ga0126359_1235152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1222	Open in IMG/M
3300010869\|Ga0126359_1282472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	630	Open in IMG/M
3300010876\|Ga0126361_10072287	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010876\|Ga0126361_10379151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3459	Open in IMG/M
3300010876\|Ga0126361_10446174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1373	Open in IMG/M
3300010880\|Ga0126350_10333888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	899	Open in IMG/M
3300010880\|Ga0126350_12097280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4020	Open in IMG/M
3300011270\|Ga0137391_10238245	Not Available	1579	Open in IMG/M
3300012357\|Ga0137384_10961698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300012359\|Ga0137385_10655539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	879	Open in IMG/M
3300012363\|Ga0137390_11612127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300012929\|Ga0137404_11212464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300012930\|Ga0137407_10327118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300014169\|Ga0181531_10072745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2029	Open in IMG/M
3300014169\|Ga0181531_10207061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Streptoalloteichus → Streptoalloteichus hindustanus	1192	Open in IMG/M
3300014654\|Ga0181525_10064916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2053	Open in IMG/M
3300017937\|Ga0187809_10065617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1184	Open in IMG/M
3300019887\|Ga0193729_1217476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300020583\|Ga0210401_10431681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1180	Open in IMG/M
3300021170\|Ga0210400_10241971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1474	Open in IMG/M
3300021180\|Ga0210396_10476155	Not Available	1094	Open in IMG/M
3300021180\|Ga0210396_11064587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300021180\|Ga0210396_11601682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300021181\|Ga0210388_10228708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1630	Open in IMG/M
3300021401\|Ga0210393_11165906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300021402\|Ga0210385_10011509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5411	Open in IMG/M
3300021402\|Ga0210385_10354845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1096	Open in IMG/M
3300021402\|Ga0210385_10394690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1038	Open in IMG/M
3300021403\|Ga0210397_10650357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300021404\|Ga0210389_10302818	Not Available	1253	Open in IMG/M
3300021404\|Ga0210389_10358836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1145	Open in IMG/M
3300021404\|Ga0210389_10873795	Not Available	700	Open in IMG/M
3300021404\|Ga0210389_11503508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300021405\|Ga0210387_10731941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	876	Open in IMG/M
3300021405\|Ga0210387_11404091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300021406\|Ga0210386_10054982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3169	Open in IMG/M
3300021406\|Ga0210386_10113424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2235	Open in IMG/M
3300021406\|Ga0210386_10408541	Not Available	1171	Open in IMG/M
3300021420\|Ga0210394_10948438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300021474\|Ga0210390_10949207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300021475\|Ga0210392_10333740	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300021477\|Ga0210398_10430841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1075	Open in IMG/M
3300021477\|Ga0210398_10684981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830	Open in IMG/M
3300021477\|Ga0210398_10836727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740	Open in IMG/M
3300021477\|Ga0210398_11316098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300021479\|Ga0210410_11836953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300022708\|Ga0242670_1018008	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300024288\|Ga0179589_10269413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300025928\|Ga0207700_11060631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300025928\|Ga0207700_11176720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300026557\|Ga0179587_10037642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2726	Open in IMG/M
3300027164\|Ga0208994_1000486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2880	Open in IMG/M
3300027297\|Ga0208241_1058144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300027496\|Ga0208987_1003457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2513	Open in IMG/M
3300027684\|Ga0209626_1058626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	969	Open in IMG/M
3300027817\|Ga0209112_10003232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4223	Open in IMG/M
3300027817\|Ga0209112_10301848	Not Available	566	Open in IMG/M
3300027867\|Ga0209167_10228468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300027867\|Ga0209167_10262356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300027884\|Ga0209275_10451578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300027889\|Ga0209380_10537919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680	Open in IMG/M
3300027895\|Ga0209624_10367064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300027898\|Ga0209067_10751540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300027905\|Ga0209415_10025814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8754	Open in IMG/M
3300027905\|Ga0209415_10541475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300027908\|Ga0209006_10277713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1435	Open in IMG/M
3300027908\|Ga0209006_10348990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1254	Open in IMG/M
3300027908\|Ga0209006_11537924	Not Available	502	Open in IMG/M
3300027910\|Ga0209583_10325152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp.	707	Open in IMG/M
3300028047\|Ga0209526_10344458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1000	Open in IMG/M
3300028047\|Ga0209526_10744278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300028536\|Ga0137415_11300914	Not Available	545	Open in IMG/M
3300028654\|Ga0265322_10020004	Not Available	1919	Open in IMG/M
3300028800\|Ga0265338_10468875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	890	Open in IMG/M
3300028879\|Ga0302229_10063248	Not Available	1809	Open in IMG/M
3300028906\|Ga0308309_11428312	Not Available	593	Open in IMG/M
3300030503\|Ga0311370_10229964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2464	Open in IMG/M
3300030611\|Ga0257182_1280662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300030730\|Ga0307482_1017931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1429	Open in IMG/M
3300030730\|Ga0307482_1079516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	861	Open in IMG/M
3300030730\|Ga0307482_1106305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300030730\|Ga0307482_1107401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	771	Open in IMG/M
3300030730\|Ga0307482_1247562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300030998\|Ga0073996_12285530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300031231\|Ga0170824_111342998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300031234\|Ga0302325_10037362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	9890	Open in IMG/M
3300031234\|Ga0302325_12244815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300031238\|Ga0265332_10033486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2236	Open in IMG/M
3300031708\|Ga0310686_105550037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1458	Open in IMG/M
3300031708\|Ga0310686_107911173	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300031708\|Ga0310686_119271679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1276	Open in IMG/M
3300031718\|Ga0307474_11108847	Not Available	626	Open in IMG/M
3300031823\|Ga0307478_10207698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1578	Open in IMG/M
3300031823\|Ga0307478_10723644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300031823\|Ga0307478_11139463	Not Available	650	Open in IMG/M
3300032770\|Ga0335085_10256460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2098	Open in IMG/M
3300032897\|Ga0335071_11388831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300032898\|Ga0335072_10768477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	928	Open in IMG/M
3300033134\|Ga0335073_11451170	Not Available	666	Open in IMG/M
3300033547\|Ga0316212_1002468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2636	Open in IMG/M
3300034163\|Ga0370515_0334101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.03%
Host-Associated	Host-Associated	3.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	7.14%
Plants	Host-Associated → Plants	3.17%
Human	Host-Associated → Human	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.71%
Freshwater	Environmental → Aquatic → Freshwater	3.97%
Peat	Environmental → Terrestrial → Peat	3.17%
Sediment	Environmental → Aquatic → Sediment	2.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.79%
Digestive System	Host-Associated → Human → Digestive System	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.52%
Loam	Environmental → Terrestrial → Soil → Loam	22.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.79%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.05%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.38%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage	0.79%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.79%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	12.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment	0.79%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.79%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001461	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010386	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 kmer 63	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030611	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP1-1 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12698J15209_10114012	3300001461	Forest Soil	MGEGIMTTAVLTRLREIREERARRRTLWRELSAYTTAEDLDDIEAAVARSDGAQTDPETQEIRRFLAARRAMSQRA*
JGI12053J15887_102898452	3300001661	Forest Soil	MGGIMTTSILTRLQEARESRARRRVLWRELSAYTTAGDLNDIEAAIARSGDAEADAETQEIRRFLAAQRNSSRAA*
JGIcombinedJ26739_1008785791	3300002245	Forest Soil	MTTSILTRLQEARQTRARRRVLWRELSAYTTAGDLNDIEAAIARSGDAEADAETQEIRRFLAAQRN
Ga0070714_1001201242	3300005435	Agricultural Soil	MATSVLTRLQEIRESHAQRRALWRELSAYSTDNDLNDIEAAIDRADAEGDPRTLEVRRILAAQRNAIAMRRR*
Ga0070710_114337311	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MATSVLTRLQEIRESYAQRRALWRELSAYSTDNDLNDIEAAIDRADAEGDPQTLEVRRILAAQRNAIAMRRG*
Ga0070733_108156682	3300005541	Surface Soil	MTSSVLSRLSEVRESYARRRALWRELTSYITADDLNDIEAAVDRCDDDAGTDPQIGEIRRILAAQRSIASRA*
Ga0070762_108220221	3300005602	Soil	MATSVLTRLQEIRESHTRRRTLWRELSGYTTANDLNDIEAAIARSDAEGDPETQAIRRFLAAQRFTS*
Ga0070762_110425202	3300005602	Soil	RLHEIRESHARRRALRRELSAYTTVGDLNDIEAAIARYDTETDPETQEIRRFLAAQRNAA
Ga0070763_100634753	3300005610	Soil	MTTSVLTRFHEIREDYARRRALWRELSAYTTDGDLNDLEAAVARSDDADTDPETQEIRRFLVAQRMASQRA*
Ga0070763_101241833	3300005610	Soil	GRGSSMTTSVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARCDDTETDPETQEIRRFLAAQRNMS*
Ga0070766_105488891	3300005921	Soil	MTSSVLSRLSEIRESYARRRALWRELTSYITADDLNDIEAAVDRCDDDAGTDPQIGEIRRILAAQRSIASRP*
Ga0075023_1003788092	3300006041	Watersheds	MDQDWVHWMVNGQTAFLRTGNTMATSVLTRLNEIRESHARRRTLWRELSAYTTASDLNDIEAAIARSDGAEADPETQAIRRFLAAQRFAS*
Ga0070765_1016827471	3300006176	Soil	IGRIDLNWIHWMVMTQSQTHGRGSSMTTSVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARCDDTETDPETQEIRRFLAAQRNMS*
Ga0102924_10583643	3300007982	Iron-Sulfur Acid Spring	MGQNWVHWIVKAFTNRQGHIMTPSVLTRLQQVRAEHARRRTLWRELSSYTTAGDLNDIEAAIARSGDAESDAQTQEIRRFLAARRNAA*
Ga0136449_1032870192	3300010379	Peatlands Soil	MVTGKPQRGTSMTTSVLSRLQEIRGGYARRRTLWRELSAYTTAGDLNDIEATIARSDTENDPETQEIRRILAAQRNLPQHA*
Ga0136806_10652912	3300010386	Sediment	MRQQHARRRALWRELSTYTSIDDLNDIEAAIDRCDEAATDPQTAEIRRFIAAQRNVARRG
Ga0126345_12557412	3300010858	Boreal Forest Soil	EKECPEGYPLKERSNMATAVLSRLTEIRDAYARRRTLWRELSAYTTADDLTDIEAAIARCDDAETDPETSEIRRILAVQRFGLDNNRV*
Ga0126345_12941511	3300010858	Boreal Forest Soil	HFHGRESTMATSVLTRLHEIRESYARRRTLWRELSAYTTASDLNDIEAAIARSSDAETDPETQQIRRFLAAQRNFS*
Ga0126352_10529121	3300010859	Boreal Forest Soil	VSKGYIMTPSVLTRLQQVRAEHARRRTLWRELSSYTTAGDLNDIEAAIARSGDAESDAQTQEIRRFLAARRNAA*
Ga0126346_10666271	3300010865	Boreal Forest Soil	STMATSVLTRLHEIRESYARRRTLWRELSAYTTASDLNDIEAAIARSSDAETDPETQQIRRFLAAQRNFS*
Ga0126346_13717781	3300010865	Boreal Forest Soil	SQIHGRGSSMTTAVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRTMS*
Ga0126346_14232693	3300010865	Boreal Forest Soil	HFHGRESTMATSVLTPLHEIRESYADIRESYTRRRTLWRELSAYTTASDLNDIEAAIARSSDAETDPETQQIRRFLAAQRNFS*
Ga0126344_10601562	3300010866	Boreal Forest Soil	MVMTQSQIHGRGSSMTTAVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRTMSL
Ga0126347_15639333	3300010867	Boreal Forest Soil	MATSVLTRLHEIRESYARRRTLWRELSAYTTASDLNDIEAAIARSSDAETDPETQQIRRFLAAQRNFS*
Ga0126359_10139211	3300010869	Boreal Forest Soil	MATAVLSRLTEIRDAYARRRTLWRELSAYTTADDLTDIEAAIARCDDAETDPETSEIRRILAVQRFGLDNNRV*
Ga0126359_12351522	3300010869	Boreal Forest Soil	MATSVLTRLQEIRESHARRRTLWRELSGYTTANDLNDIEAAIARSDAEADPETQEIRRFLAAQRFTS*
Ga0126359_12824721	3300010869	Boreal Forest Soil	KNTMATAILSRLAEIREASARRRTLWRELSAYTTADDLNDIEAAIARCGDAETDPETQEVRRIIAAQRFTQVVPRS*
Ga0126361_100722872	3300010876	Boreal Forest Soil	MTPSVLTRLQQVRAEHARRRTLWRELSSYTTAGDLNDIEAAIARSGDAESDAQTQEIRRFLAARRNAA*
Ga0126361_103791514	3300010876	Boreal Forest Soil	MTTSVLTRLQEIRGDYARRRTLWRELSAYTTASDLNDIEAAIARCDDAETDPETQDIRRFLANQRTLSQQP*
Ga0126361_104461742	3300010876	Boreal Forest Soil	MTTAVLNRLHKIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRTMS*
Ga0126350_103338882	3300010880	Boreal Forest Soil	MATAILSRLAEIREASARRRTLWRELSAYTTADDLNDIEAAIARCDDAETDPETQEVRRIIAAQRFSQFTPRS*
Ga0126350_120972805	3300010880	Boreal Forest Soil	MTTAVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRTMS*
Ga0137391_102382452	3300011270	Vadose Zone Soil	MDLNWIHWMVIAQSQIHGRGSTMTTTVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRNMS*
Ga0137384_109616982	3300012357	Vadose Zone Soil	MTTSVLSRLSEIRESYARRRDLWRELSAYTTSNDLNDIEAAIARSGDVEADLETQEIRRFLAAQRMASQRA*
Ga0137385_106555392	3300012359	Vadose Zone Soil	MTTSVLSRLSEIRESYARRRDLWRELSAYTTANDLNDIEAAIARSGDVEADLETQEIRRFLA
Ga0137390_116121272	3300012363	Vadose Zone Soil	MTTTVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRNMS*
Ga0137404_112124641	3300012929	Vadose Zone Soil	MDQCWVHWMVTGQSHFHGRESTMATSVLTRLHEIRESYTEIRESYARRRTLWRELSAYTTASDLNDIEAAIARSGDAETDPETQQIRRFLAAQRNIA*
Ga0137407_103271182	3300012930	Vadose Zone Soil	MVTGQSHFHGRESTMATSVLTRLHEIRESYTELRESYTRRRTLWRELSAYTTASDLNDIEAAIARSGDAETDPETQQIRRFLAAQRNMT*
Ga0181531_100727451	3300014169	Bog	MTTSVLSRLHEIRDSYARRRTLWRELTSYITADDLNDIEAAVDRCDDDSGTDPQIKEIRRILAAQRSIASRP*
Ga0181531_102070613	3300014169	Bog	EDYARRRALWRELSAYTTDGDLNDLEAAIARSDDADTDPETQEIRRFLVAQRMASQRA*
Ga0181525_100649161	3300014654	Bog	MTTSVLTRFHEIREDYARRRALWRELSAYTTDGDLNDLEAAIARSDDADTDPETQEIRRFLVAQRMASQRA*
Ga0187809_100656171	3300017937	Freshwater Sediment	MATSVLTRLQEIRESRAQRRALWRELSAYSTDNDLNDIEAAIDRADAEGDPQTLEVRRILAAQRNAIAMRRG
Ga0193729_12174762	3300019887	Soil	MATSVLTRLHEIRESYTEIRESYTRRRTLWRELSAYTTASDLNDIEAAIARSGDAETDPETQQIRRFLAAQRNMT
Ga0210401_104316811	3300020583	Soil	MTISILTRLQEIRESRARQRVLWRELSTYTTTEDLNDIEAAIARSGAEADPQTQEIRRFLAAQRAVPHS
Ga0210400_102419713	3300021170	Soil	RESIMTTTVLTRLREIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDVDTDPQTQEIRRFLAARRNVSHAA
Ga0210396_104761553	3300021180	Soil	MTTAVLTRLREIREERARRRTLWRELSAYTTAGDLNDIEAAVARSDGAETNPETQEIRRFLATRRTTSQHA
Ga0210396_110645872	3300021180	Soil	MTTTVLTRLREIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDVDTDPQTQEIRRFLAARRNVSHAA
Ga0210396_116016821	3300021180	Soil	MTPSVLTRLQQVRAEHARRRTLWRELSSYTTAGDLNDIEAAIARSGDAESDAQTQEIRRFLAARRNAA
Ga0210388_102287083	3300021181	Soil	MVTAQSQIQGRESIMTTTVLTRLREIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDVDTDPQTQEIRRFLAARRNVSHAA
Ga0210393_111659062	3300021401	Soil	MVTEKSQQITYGGIMTTSILTRLQEARESRARRRVLWRELSAYTTAGDLNDIEAAIARSGDAEADAETQEIRRFLAAQRNSSRAA
Ga0210385_100115093	3300021402	Soil	MSAVLTRLREIRDERTRRRTLWRELSVYATDNDLNDIEAAIARSEDGEANRETQEIRRFLAAQRGLSQRA
Ga0210385_103548452	3300021402	Soil	MTTSVLTRFHEIREDYARRRALWRELSAYTTDGDLNDLEAAVARSDDADTDPETQEIRRFLVAQRMASQRA
Ga0210385_103946902	3300021402	Soil	MTTAVLNRLHEIRESHARRRALRRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRNMS
Ga0210397_106503572	3300021403	Soil	MATSVLTRLQEIRESHTRRRTLWRELSGYTTANDLNDIEAAIARSDAEGDPETQAIRRFLAAQRFTS
Ga0210389_103028182	3300021404	Soil	MTASILTRLQEIRESHARRRVLWRELSAYTTTDELNDIEAAIARSGAEADPETQQIRRFLAAQRNAA
Ga0210389_103588362	3300021404	Soil	MTTSILTRLQEARQSRARRRVLWRELSAYTTAGDLNDIEAAIARSGDAEADAETQEIRRFLAAQRNSSRAA
Ga0210389_108737951	3300021404	Soil	MTIAVLTRLREIREERARRRTLWRELSAYTTAEELNDIEAAVARSEGAETDPEIQEIRHFLAARRTMSQRA
Ga0210389_115035081	3300021404	Soil	MTISILTRLQEIRESHARRRILWRELSAYTTTEDLNDIEAAIARSGDAETDPETQEIRRFLAAQRNAA
Ga0210387_107319412	3300021405	Soil	MTTSILTRLQEARQSRARRRVLWRELSAYTTAGDLNDIEAAIARSGDAAADAETQEIRRFLAAQRNSSRAA
Ga0210387_114040912	3300021405	Soil	MATSVLTRLQEIRESRARRRTLWRELSAYTTAGDLNDIEAAIARSDAEADPETQQIRRFLSAQRNMA
Ga0210386_100549822	3300021406	Soil	MTPTVLTRLRRIRAERARRRTLWRELSAYTTAGDLNDIEAAIARSGDAGNDPETQEIRRFLAARRNAA
Ga0210386_101134243	3300021406	Soil	MVTAQSQIHGRESIMTTTVLTRLREIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDVDTDPQTQEIRRFLAARRNVSHAA
Ga0210386_104085412	3300021406	Soil	MTISVLTRFKATRADRARRRTLRRELSACTTNNDLNDIEAAIARSDDAEIDPEIQEIRRFLAARRTLSQRA
Ga0210394_109484382	3300021420	Soil	MTSSVSSRLSEIRESYARRRALWRELTSYITADDLNDIEAAVDRCDDDAGTDPQIGEIRRILAAQRSIASRP
Ga0210390_109492072	3300021474	Soil	MTPTVLTRLRRIRAERARRRTLWRELSAYTTAGDLNDIEAAIARSGDAGNDPETREIRRF
Ga0210392_103337402	3300021475	Soil	MTTSILTRLQEIRESRARRRVLWRELSAYTTTDDLNDIEAAIARSGAETDPQTQQIRRFLAAQRNVA
Ga0210398_104308411	3300021477	Soil	VLTRLRRIRAERARRRTLWRELSAYTTAGDLNDIEAAIARSGDAGNDPETQEIRRFLAARRNAA
Ga0210398_106849812	3300021477	Soil	MTPTVLTRLRRIRAERARRRTLWRELSAYTTAGDLNDIEAAIARSGDAGNDPETQEI
Ga0210398_108367272	3300021477	Soil	MTTTVLTRLREIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDVDTDPQTQEIRRF
Ga0210398_113160982	3300021477	Soil	MTTSVLTRLQEIREDHARRRALWRELSDYKTADDLNDLEAAIDRCDRAETDPETRAIRQFLAAQRNVSLHN
Ga0210410_118369531	3300021479	Soil	MTTSVLTRLQEIREDRARRRALWRELSAYKTADDLNDLEAAIDRCDGAQTDPQTRVIRQFLAAQRNVSAHN
Ga0242670_10180081	3300022708	Soil	EVRESYARRRALWRELTSYITADDLNDIEAAIARSDDTETDPETQEIRRFLAAQRNMS
Ga0179589_102694131	3300024288	Vadose Zone Soil	MATSVLTRLHEIRESYTEIRESYARRRTLWRELSAYTTASDLNDIEAAIARSGDAETDPETQQIRRFLAAQRNIA
Ga0207700_110606312	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTVLHRLHEIRESRARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPQTQEIRRFLAAQRNG
Ga0207700_111767202	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MATSVLTRLQEIRESHAQRRALWRELSAYSTDNDLNDIEAAIDRADAEGDPRTLEVRRILAAQRNAIAMRRR
Ga0179587_100376422	3300026557	Vadose Zone Soil	MTTAVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRNMS
Ga0208994_10004863	3300027164	Forest Soil	MTTSILTRLQEARESRARRRVLWRELSAYTTAGDLNDIEAAIARSGDAEADAETQEIRRFLAAQRNSSRAA
Ga0208241_10581441	3300027297	Forest Soil	MTTSVLTRFHEIREDYARRRALWRELSAYTTDGDLNDLEAAIARSDDADTDPETQEIRRFLVAQRMASQRA
Ga0208987_10034572	3300027496	Forest Soil	MVTEKSRQITHGGIMTTSILTRLQEARESRARRRALWRELSAYTTTGDLNDIEAAIARSGDAQADAETQEIRRFLAAQRNSSRAA
Ga0209626_10586262	3300027684	Forest Soil	MTTSILTRLQEARQTRARRRVLWRELSAYTTAGDLNDIEAAIARSGDAEADAETQEIRRFLAAQRNSSRAA
Ga0209112_100032322	3300027817	Forest Soil	MVPRHSQDRMGEGIMTTAVLTRLREIREERARRRTLWRELSAYTTAEDLDDIEAAVARSDGAQTDPETQEIRRFLAARRAMSQRA
Ga0209112_103018481	3300027817	Forest Soil	MTTAVLTRLREIREERARRRTLWRELSAYTTTEDLNDIEAAVARSDGAETDPETQEIRRFLAARRTMSEQL
Ga0209167_102284681	3300027867	Surface Soil	MTSSVLSRLSEVRESYARRRALWRELTSYITADDLNDIEAAVDRCDDDAGTDPQIGEIRRILAAQRSIASRA
Ga0209167_102623562	3300027867	Surface Soil	MTTSVLSRLHEIRESYARRRTLWRELTSYITADDLNDIEAAVDRCDDDSGTDPRIEEIRRILAAQRSIASRP
Ga0209275_104515782	3300027884	Soil	MATSVLTRLQEIRESHTRRRTLWRELSGYTTANDLNDIEAAIARSDAEGDPQTQEIRRFLAAQRFTS
Ga0209380_105379191	3300027889	Soil	MTSSVLSRLSEIRESYARRRALWRELTSYITADDLNDIEAAVDRCDDDAGTDPQIGEIRRILAAQRSIAS
Ga0209624_103670642	3300027895	Forest Soil	MTTSVLNRLHQIREAYAQRRTLWRELSSYITADDLNDIEAAVDRCDDAESDPQTRQIRQYLAARRATLYS
Ga0209067_107515402	3300027898	Watersheds	MATSVISRLSEIRDSYARRRTLWRELSAYTTSNDRNDLEAAIARSEEAESNPQTQELRRILSAQRSALGL
Ga0209415_100258146	3300027905	Peatlands Soil	MTTSVLSRLQEIRGGYARRRTLWRELSAYTTAGDLNDIEATIARSDTENDPETQEIRRILAAQRNLPQHA
Ga0209415_105414752	3300027905	Peatlands Soil	MTSSVLSRLNEIRESYARRRTLWRELTSYITADDLNDIEAAVDRCDDDAGTDPQIGEIRRILAAQRSIASRA
Ga0209006_102777132	3300027908	Forest Soil	MTTSVLNRLHEIRESYARRRTLWRELTSYITADDLNDIEAAVDRCDDDTGTDPQLEEIRRILAAQRSIASRA
Ga0209006_103489902	3300027908	Forest Soil	MNDMTTSVLSRLSEIREAYSRRRSLWRELSEYITADDLNDIEAAVDRCDDDGTGAQTQEIRRILAAQRSIARRPLGLG
Ga0209006_115379242	3300027908	Forest Soil	GYNTMATAILSRLAEIREASARRRTLWRELSAYTTADDLNDIEAAIARCDDAETDPETQEVRRIIAAQRFSQFTPRS
Ga0209583_103251522	3300027910	Watersheds	MDQDWVHWMVNGQTAFLRTGNTMATSVLTRLNEIRESHARRRTLWRELSAYTTASDLNDIEAAIARSDGAEADPETQAIRRFLAAQRFAS
Ga0209526_103444582	3300028047	Forest Soil	MTTTVLNRLREIRESRARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPETQEILRFLAAQRNAA
Ga0209526_107442781	3300028047	Forest Soil	MVTKKSQQITYGGTMTTSILTRLQEARQSRARRRVLWRELSAYTTAGDLNDIEAAIARSGDTEADAETQEIRRFLAAQRNSSRAA
Ga0137415_113009142	3300028536	Vadose Zone Soil	MTTTVLNRLHEIRESHARRRALRRELSAYTTAGDLNDIEAAIARSDDTETDPETQEIRRFLAAQRNMS
Ga0265322_100200042	3300028654	Rhizosphere	MTTSVLSRLHEIRESYARRRTLWRELTSYITADDLNDIEAAVDRCDDDSGTDPRIEEIRRILASQRSIASRP
Ga0265338_104688752	3300028800	Rhizosphere	MTTSVLTRLNEIRESYTRRRALWRELSVYTTENDLNDLEAAIARSEAEGDQETQEVRRVLAAQRAALAGRRG
Ga0302229_100632481	3300028879	Palsa	MATAVLSRLTEIRDAHARRRALWRELSAYTTADDLTDLEAAVARCDDAETHPETREVRRILSAQRFNSERH
Ga0308309_114283121	3300028906	Soil	MVMTQSQTHGRGSSMTTSVLNRLHEIRESHARRRALRRELSAYTTVGDLNDIEAAIARCDDTETDPETQEIRRFLAAQRNAA
Ga0311370_102299641	3300030503	Palsa	MASSILNRLQEIRDDYARRRTLWRELSAYQTTDALNDLEAAITRSETEGEPETQEMRRILAAQRIAVLQRG
Ga0257182_12806622	3300030611	Host-Associated	MATAVLSRLSEIRDAYARRRALWRELSAYTTADDLTDIEAAIARCDDAETHPETAEIRRILATQRFALDVRS
Ga0307482_10179311	3300030730	Hardwood Forest Soil	SKAEMRGSIMTPTVLTRLRRIRAERARRRTLWRELSAYTTAGDLNDIEAAIARSGDAGNDPETQEIRRFLAARRNAA
Ga0307482_10795161	3300030730	Hardwood Forest Soil	PQSIQRGELMTTSVLTRLQEIREDRARRRALWRELSAYKTADDLNDLEAAIDRCDGAQTDPQTRVIRQFLAAQRNVSAHN
Ga0307482_11063052	3300030730	Hardwood Forest Soil	MTTAVLNRLHEIRESHARRRALRRELSAYTTVGDLNDIEAAIARYDTETDPETQEIRRFLAAQRNAA
Ga0307482_11074011	3300030730	Hardwood Forest Soil	MTTAVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDPQTQEIRRFLAAQRTMSRA
Ga0307482_12475621	3300030730	Hardwood Forest Soil	RQEAMTTSMLTRLTEIRESYAQRRALWRELSAYTTDGELNDIEAAVDRSDSEGDPRTREVRRILATRRAALAGRRY
Ga0073996_122855301	3300030998	Soil	GSTMTTAVLNRLHEIRESHARRRALWRELSAYTTAGDLNDIEAAIARSDDTETDQETQEIRRFLAAQRNMSYRA
Ga0170824_1113429981	3300031231	Forest Soil	MTTSVLTRLQEIREDHARRRALWRELSAYKTADDLNDLEAAIDRCDGAETDPQTRAIRQFLAAQRNVS
Ga0302325_100373621	3300031234	Palsa	TIMASSILNRLQEIRDDYARRRTLWRELSAYQTTDALNDLEAAITRSETEGEPETQEMRRILAAQRIAVLQRG
Ga0302325_122448151	3300031234	Palsa	MATAVLSRLTEIRDAHARRRALWRELSAYTTADDLTDLEAAVARCDDAETHPETREVRRILS
Ga0265332_100334863	3300031238	Rhizosphere	MTTSVLSRLHEIRESYARRRTLWRELTSYITADDLNDIEAAVDRCDDDSGTDPRIEEIRRILA
Ga0310686_1055500372	3300031708	Soil	MTTSVLSRLSEIRESNARRRALWRELSAYTTAGDLNDIEAAIARCDDAETDPETLEVRRILASQRFLSHA
Ga0310686_1079111731	3300031708	Soil	IMTPTVLTRLQRIRAERARRRTLWRELSAYTTAGDLNDIEAAIARSGDAGNDPETQEIRRFLAARRNAA
Ga0310686_1192716792	3300031708	Soil	MTTSVLTRFHEIREDYARRRTLWRELSAYTTDGDLNDLEAAIARSDDADTDPETQEIRRFLVAQRMASQRA
Ga0307474_111088471	3300031718	Hardwood Forest Soil	MTTAVLNRLHEIRESRARRRALRRELSAYTTVGDLNDIEAAIARYDTETDPETQEIRRFLAAQRNAA
Ga0307478_102076983	3300031823	Hardwood Forest Soil	MTTSILTRLQEARQSRARRRVLWRELSAYTTAGDLNDIEAAIARSGDAEADAETQEIRRFLAAQRNSARAA
Ga0307478_107236441	3300031823	Hardwood Forest Soil	RLRRIRAERARRRTLWRELSAYTTAGDLNDIEAAIARSGDAGNDPETQEIRRFLAARRNA
Ga0307478_111394632	3300031823	Hardwood Forest Soil	MTTAVLTRLREIREERARRRTLWRELSAYTTAEDLNDIEAAVARSDGAETDPETQEIRRFLATRRTMAQRT
Ga0335085_102564602	3300032770	Soil	MRTSVLTRLQEIRESRTRRRTLWRELSAYTTADDLDDLEAAIARSAGAESDPETREIRRFLATRRMSQAA
Ga0335071_113888312	3300032897	Soil	MTTSVLTRLHEIRESQARRRALWRELSVYTTDNDLNDIEAAVDRADAEGDPRTLEVRRILAAQRNAIALRRG
Ga0335072_107684772	3300032898	Soil	MTPTVLTRLQEFRAEYARRRTLWRELSAYTSVDDLNDIEAAIARSNAENDPETMEIRRFLAARRNVANAA
Ga0335073_114511702	3300033134	Soil	MMTPSVLSRVQEIREAYARRRALFRELSTYTSADDLNDIEAAINRCDDRTQADPETQEIRRFLAARRNNLTQYS
Ga0316212_10024684	3300033547	Roots	MTTSVLTRFQEIREDYARRRALWRELSAYTTDGDLNDLEAAIARSDDADTDPETQEIR
Ga0370515_0334101_459_638	3300034163	Untreated Peat Soil	MTTSVLTRFQEIREDYARRRALWRELSAYTTDGDLNDLEAAIARSDDADTDPETQEIRRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066934

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences