Metagenome / Metatranscriptome Family F066909

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066909
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	79 residues
Representative Sequence	MTHVVSLRMPPKKVAAIDRRAADSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAALRAQGEKDR
Number of Associated Samples	108
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.70 %
% of genes near scaffold ends (potentially truncated)	38.89 %
% of genes from short scaffolds (< 2000 bps)	86.51 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (75.397 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.429 % of family members)
Environment Ontology (ENVO)	Unclassified (34.921 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.746 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.91% β-sheet: 0.00% Coil/Unstructured: 59.09%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01850	PIN	20.63
PF12029	DUF3516	3.97
PF04480	DUF559	2.38
PF02518	HATPase_c	2.38
PF07690	MFS_1	1.59
PF07596	SBP_bac_10	1.59
PF05649	Peptidase_M13_N	1.59
PF02113	Peptidase_S13	1.59
PF13633	Obsolete Pfam Family	1.59
PF00829	Ribosomal_L21p	1.59
PF03450	CO_deh_flav_C	0.79
PF08335	GlnD_UR_UTase	0.79
PF00009	GTP_EFTU	0.79
PF07638	Sigma70_ECF	0.79
PF13361	UvrD_C	0.79
PF14094	DUF4272	0.79
PF06271	RDD	0.79
PF14559	TPR_19	0.79
PF01180	DHO_dh	0.79
PF03572	Peptidase_S41	0.79
PF01636	APH	0.79
PF03050	DDE_Tnp_IS66	0.79
PF01434	Peptidase_M41	0.79
PF00072	Response_reg	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2165	Type II secretory pathway, pseudopilin PulG	Cell motility [N]	3.17
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	1.59
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.59
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	1.59
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.79
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.79
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.79
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.79
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.79
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.79
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.79
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.79
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.40 %
Unclassified	root	N/A	24.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.40 %
Unclassified	root	N/A	24.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.40 %
Unclassified	root	N/A	24.60 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	44.44 %
Unclassified	root	N/A	24.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	43.65 %
Unclassified	root	N/A	24.60 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	38.10 %
Unclassified	root	N/A	24.60 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.17 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.79 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	38.10 %
Unclassified	root	N/A	24.60 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.17 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	0.79 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.79 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	38.10 %
Unclassified	root	N/A	24.60 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	3.17 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.79 %
Phycisphaerae bacterium SM1_79	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM1_79	0.79 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	38.10 %
Unclassified	root	N/A	24.60 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	1.59 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1.59 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.79 %
Phycisphaerae bacterium SM1_79	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM1_79	0.79 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	38.10 %
Unclassified	root	N/A	24.60 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.59 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.59 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.79 %
Phycisphaerae bacterium SM1_79	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM1_79	0.79 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	38.10 %
Unclassified	root	N/A	24.60 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.59 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.79 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.79 %
Phycisphaerae bacterium SM1_79	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM1_79	0.79 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104632003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300001213\|JGIcombinedJ13530_100549158	Not Available	545	Open in IMG/M
3300001213\|JGIcombinedJ13530_101827256	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	608	Open in IMG/M
3300001686\|C688J18823_10536711	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005329\|Ga0070683_101205384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300005439\|Ga0070711_100701133	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300005439\|Ga0070711_101134746	Not Available	674	Open in IMG/M
3300005445\|Ga0070708_101009752	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005529\|Ga0070741_10010119	All Organisms → cellular organisms → Bacteria	17959	Open in IMG/M
3300005530\|Ga0070679_100444742	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300005557\|Ga0066704_10328016	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300005561\|Ga0066699_10541077	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300005569\|Ga0066705_10027922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3002	Open in IMG/M
3300005577\|Ga0068857_100000483	All Organisms → cellular organisms → Bacteria	28463	Open in IMG/M
3300005586\|Ga0066691_10712076	Not Available	594	Open in IMG/M
3300006196\|Ga0075422_10133545	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300006797\|Ga0066659_10552001	Not Available	930	Open in IMG/M
3300006806\|Ga0079220_11894650	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300008786\|Ga0103639_1007773	Not Available	526	Open in IMG/M
3300009012\|Ga0066710_101659261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	975	Open in IMG/M
3300009091\|Ga0102851_11013973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300009111\|Ga0115026_10448356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	947	Open in IMG/M
3300009137\|Ga0066709_101058651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1190	Open in IMG/M
3300009137\|Ga0066709_102049045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	792	Open in IMG/M
3300009137\|Ga0066709_102863087	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300009167\|Ga0113563_10177435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2089	Open in IMG/M
3300009167\|Ga0113563_10347762	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1560	Open in IMG/M
3300009762\|Ga0116130_1142617	Not Available	754	Open in IMG/M
3300009776\|Ga0116154_10088252	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300010341\|Ga0074045_10598610	Not Available	703	Open in IMG/M
3300010366\|Ga0126379_10911315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	982	Open in IMG/M
3300010379\|Ga0136449_100473301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2188	Open in IMG/M
3300010401\|Ga0134121_12849401	Not Available	530	Open in IMG/M
3300010413\|Ga0136851_10138219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2552	Open in IMG/M
3300012199\|Ga0137383_10221755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1386	Open in IMG/M
3300012200\|Ga0137382_10074879	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300012203\|Ga0137399_10941133	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012203\|Ga0137399_11353803	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012205\|Ga0137362_10497624	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300012210\|Ga0137378_10768242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	875	Open in IMG/M
3300012210\|Ga0137378_11074702	Not Available	719	Open in IMG/M
3300012211\|Ga0137377_10185040	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300012211\|Ga0137377_11079381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300012212\|Ga0150985_108659051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300012212\|Ga0150985_112832198	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300012349\|Ga0137387_11253976	Not Available	521	Open in IMG/M
3300012356\|Ga0137371_11305026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300012361\|Ga0137360_10203512	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300012362\|Ga0137361_10494633	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300012469\|Ga0150984_117908692	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300012469\|Ga0150984_118121897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300012683\|Ga0137398_10893704	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300012685\|Ga0137397_10824878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300012685\|Ga0137397_11312217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300012918\|Ga0137396_10562885	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300012922\|Ga0137394_10179596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1805	Open in IMG/M
3300012923\|Ga0137359_10128798	All Organisms → cellular organisms → Bacteria	2249	Open in IMG/M
3300012923\|Ga0137359_10207525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1750	Open in IMG/M
3300012923\|Ga0137359_11733307	Not Available	512	Open in IMG/M
3300012925\|Ga0137419_11884614	Not Available	513	Open in IMG/M
3300012927\|Ga0137416_10981913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	754	Open in IMG/M
3300012930\|Ga0137407_12326581	Not Available	512	Open in IMG/M
3300014490\|Ga0182010_10696967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300014491\|Ga0182014_10047640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2995	Open in IMG/M
3300014502\|Ga0182021_12757208	Not Available	590	Open in IMG/M
3300014502\|Ga0182021_13688177	Not Available	508	Open in IMG/M
3300015245\|Ga0137409_10129833	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300015264\|Ga0137403_11628128	Not Available	500	Open in IMG/M
3300016319\|Ga0182033_10455241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1092	Open in IMG/M
3300016404\|Ga0182037_11231069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300016422\|Ga0182039_10216035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1540	Open in IMG/M
3300018005\|Ga0187878_1354117	Not Available	518	Open in IMG/M
3300018015\|Ga0187866_1285473	Not Available	583	Open in IMG/M
3300018021\|Ga0187882_1291924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300018030\|Ga0187869_10454181	Not Available	609	Open in IMG/M
3300018034\|Ga0187863_10596836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300018044\|Ga0187890_10201480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1128	Open in IMG/M
3300018057\|Ga0187858_10598923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300018083\|Ga0184628_10136131	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300019775\|Ga0197853_1015008	Not Available	602	Open in IMG/M
3300019999\|Ga0193718_1031028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1186	Open in IMG/M
3300020004\|Ga0193755_1155958	Not Available	689	Open in IMG/M
3300020163\|Ga0194039_1003500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	7583	Open in IMG/M
3300022524\|Ga0224534_1013321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2422	Open in IMG/M
3300024284\|Ga0247671_1032002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300025716\|Ga0209746_1034423	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300025725\|Ga0209638_1079841	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300025865\|Ga0209226_10294289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300025888\|Ga0209540_10273867	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300026078\|Ga0207702_10714346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	988	Open in IMG/M
3300026285\|Ga0209438_1071613	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300027877\|Ga0209293_10787104	Not Available	504	Open in IMG/M
3300027896\|Ga0209777_10868169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	628	Open in IMG/M
3300027903\|Ga0209488_10646160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	763	Open in IMG/M
3300027907\|Ga0207428_10749179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300031057\|Ga0170834_113266110	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300031122\|Ga0170822_16316902	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031231\|Ga0170824_124123231	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300031727\|Ga0316576_10287395	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium SM1_79	1231	Open in IMG/M
3300031754\|Ga0307475_11227527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300031771\|Ga0318546_10495609	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300031834\|Ga0315290_10823575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300031879\|Ga0306919_11024767	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031954\|Ga0306926_10583674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1366	Open in IMG/M
3300032055\|Ga0318575_10483037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300032143\|Ga0315292_10655365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	884	Open in IMG/M
3300032164\|Ga0315283_11323404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300032180\|Ga0307471_103543883	Not Available	552	Open in IMG/M
3300032256\|Ga0315271_10808870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300032770\|Ga0335085_11977418	Not Available	592	Open in IMG/M
3300032828\|Ga0335080_11139553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300032892\|Ga0335081_11790918	Not Available	665	Open in IMG/M
3300032893\|Ga0335069_10707775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1144	Open in IMG/M
3300032893\|Ga0335069_11647770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300033402\|Ga0326728_10000130	All Organisms → cellular organisms → Bacteria	305707	Open in IMG/M
3300033483\|Ga0316629_10824894	Not Available	714	Open in IMG/M
3300033513\|Ga0316628_103111944	Not Available	605	Open in IMG/M
3300033513\|Ga0316628_104185254	Not Available	514	Open in IMG/M
3300033521\|Ga0316616_100688603	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300033521\|Ga0316616_101809984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300033557\|Ga0316617_101746220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300033755\|Ga0371489_0001591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	33685	Open in IMG/M
3300033823\|Ga0334837_021483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2318	Open in IMG/M
3300034128\|Ga0370490_0213563	Not Available	635	Open in IMG/M
3300034128\|Ga0370490_0290082	Not Available	542	Open in IMG/M
3300034268\|Ga0372943_0851868	Not Available	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.27%
Host-Associated	Host-Associated	7.14%
Engineered	Engineered	1.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.02%
Aquatic	Environmental → Aquatic	18.25%
Plants	Host-Associated → Plants	7.14%
Wastewater	Engineered → Wastewater	0.79%
Lab Enrichment	Engineered → Lab Enrichment	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.84%
Freshwater	Environmental → Aquatic → Freshwater	15.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.97%
Peat	Environmental → Terrestrial → Peat	3.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.17%
Marine	Environmental → Aquatic → Marine	1.59%
Sediment	Environmental → Aquatic → Sediment	1.59%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.79%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.73%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Lake	Environmental → Aquatic → Freshwater → Lake	3.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.59%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.79%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.79%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.59%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.17%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.17%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.38%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.59%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.59%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.59%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.59%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.79%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.79%
Enriched Sediment	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enriched Sediment	0.79%
Wetland Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300008786	Microbial communities from wetland soil in Czech Republic - M3_cDNA	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009776	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC030_MetaG	Engineered	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019775	Lab enriched sediment microbial communities from hydrocarbon-contaminated retail site, Toronto, Canada - S1, HI.1247_001	Engineered	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031727	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5	Host-Associated	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1046320031	3300000364	Soil	RMASKKVAAIDRRAANSGVDRTKYLLRLVDADLARATAKSKRRFASRHLLGKFHSKGSTNAAVRAALKSQSEEDR*
JGIcombinedJ13530_1005491581	3300001213	Wetland	MTHVVSLRMPPEKVAAIDRRANDSGLDRTKYLLRLVDQDLARRVRRSKRRFASLHLLGRFASLGSSNAQVRAALKAQGEEDR*
JGIcombinedJ13530_1018272562	3300001213	Wetland	MPPEKVAAIDRRATDSGLDRTKYLLRLVDQDLAQPARKSKRRFASRHLLGGFRSRGSSNLQVRAALKAQGEEDR*
C688J18823_105367111	3300001686	Soil	MTRVVSLRMPHKKVAAIDRRAADAGLDRTKYLLRLVYADLAQSAPKSPRRFASLHLLGKFRSKGSTNAD
Ga0070683_1012053841	3300005329	Corn Rhizosphere	MTQVVSIRMASKKVAAIDRKAADSGLDRTKYLLRLVDEDLREISKPKRRFASAHLLGKFQSKGSTNTAVRAALKSQSEEDC*
Ga0070711_1007011332	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTQVISVRMPSQKVAAIDKRAADEGLDRTKYLLRLVDQDLAQRSKRRRRRFVSRHLLGRFHSRGSSNAQVRLALKARGDEDR*
Ga0070711_1011347462	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTSKKVAAIDRKAADSGVDRTKYLLRLVDEDLGRETSKPKRRFASTHLLGKFHSSGSTNAAVRAALKSQGEKDR*
Ga0070708_1010097522	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRKVAAVDRRAADAGLDRTGYILRLVEQDLARQAPKVRRRFASTHLLGKFRSTGSTNAQVRAALARKGHGKNR*
Ga0070741_1001011914	3300005529	Surface Soil	MTQVISVRIPAQKVAAIDRRAADEGLDRTKYLLKLVEQDLAQRNRRLKRRFASSHLLGKFHSRGSSNAEIRRALKSRCDEDR*
Ga0070679_1004447422	3300005530	Corn Rhizosphere	MTHIVSLRIPPKKVAAIDRRAADSGLDRTKYLLRLVDKDLAGPAPKSKQKFASGHLLGRFRSKGSTNPEVRAAMKAQCEKDR*
Ga0066704_103280162	3300005557	Soil	MTQVVSLRMPSDKVAALDRRAADSGLDRTKYLLRLVEEDLSRSAPKTKRRFASMHLLGKFRSRGSSNAAVRAAMRAHVAKDR*
Ga0066699_105410772	3300005561	Soil	MQPKKVAAIDRRAADSGLDRTRYILRLVDADLARPAAKSKRRFASVHLLGKFRSKGSCNAQIRAALSE*
Ga0066705_100279223	3300005569	Soil	MPPEKVAAIDRRAADSGLDRTKYLLRLVDEDLAQPAPKSNRRFASGHLLGKFRAKGSSNAEIRAALKLRSEQDR*
Ga0068857_1000004839	3300005577	Corn Rhizosphere	MASKKVAAIDRKAADSGLDRTKYLLRLVDEDLREISKPKRRFASAHLLGKFQSKGSTNTAVRAALKSQSEEDC*
Ga0066691_107120762	3300005586	Soil	NCLKSALDSLTYHPLSCKQYRMTHVVSLRMPLRKVAAIDRKAADSGLDRTKYILRLVDQDLSRPAQKSKRRFASRHLLGKFRSQGSSNAQVRAALKVHCDKDC*
Ga0075422_101335452	3300006196	Populus Rhizosphere	MTEVVSLRMPSGKVAAIDRRAADSGLDRSKYLLRLVEQDLARPMPKSRRRFASVHLLGKFRSHGSSNAAIRAAMKAHIEKDR*
Ga0066659_105520013	3300006797	Soil	MPPEKVAAIDRRAADSGLDRTKYLLRLVDDDLAQPAPKSNRRFASGHLLGKFRAKGSSNAEIRAALKLRSEQDR*
Ga0079220_118946502	3300006806	Agricultural Soil	MTHVVSLRVPLRQVAAIDRRAADAGLDRTGYILSLVEQDLSRPGRKKRRRFASGHLLGKFRSSGSSNSQVRAALARAR
Ga0103639_10077732	3300008786	Wetland Soil	MPPEQVAAIDRRATDSGLDRTKYLLRLVDQDLARPARRLKRRFASLHLLGRFRSRGSSNAQVRAALRAQGEKDR*
Ga0066710_1016592612	3300009012	Grasslands Soil	MLRRFSGWCKRFRMTHVVSLRMPLRKLAAVDRRAADAGLDRTGYILRLVEQDLARQAPKVRRRFASTHLLGKFRSTGSTNAQVRAALARKGHGKNR
Ga0102851_110139732	3300009091	Freshwater Wetlands	MPPDKVAAIDRRATDSGMPRTKYLLRLVDQELARPSRKSKRRFASLHLLGRFSSRGSSNAQVRAALKAKGDEDR*
Ga0115026_104483562	3300009111	Wetland	MTQVISLRVPPGKVAAIDRRAADSGLDRTNYLLRLVEEDLMRPVPKSKRRFASVHLLGKFRSRGSSNAAVRAALKSQGEKDR*
Ga0066709_1010586512	3300009137	Grasslands Soil	MTHVVSLRMPLRQVAAVDRRAADSGLDRTRYILRLVEQDLAREAPKTRRRFTSLNLLGKFPSSGSSNRQVRAALARRARAKT*
Ga0066709_1020490452	3300009137	Grasslands Soil	MPAEKVAAIDRRAADSGLNRTKYLLRLVDEDLARPAARSKRRFASAQFLGKFRAKGSSNAAVRAALKADGEKDR*
Ga0066709_1028630872	3300009137	Grasslands Soil	MPPKKVAAVDRRAADSGLDRTKYILRLVDQDLAKPAPKSKRRFASLHLLGKFQSQGSSNAQIRAALKARCEQDR*
Ga0113563_101774352	3300009167	Freshwater Wetlands	MPPDKVAAIDRRATDSGMPRTKYLLRLVDQELARPSRKSRRRFASLHLLGRFSSRGSSNAQVRAALKAKGDEDR*
Ga0113563_103477621	3300009167	Freshwater Wetlands	MTQVISLRVPPGKVAAIDRRAADSGLDRTNYLLRLVEEDLMRPVPKSKRRFASVHLLGKFRSRGSSNA
Ga0116130_11426171	3300009762	Peatland	MPSEKVAAIDRRAADSGLDRTKHLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAA
Ga0116154_100882522	3300009776	Anaerobic Digestor Sludge	MPLKQVAALDRRAADSGVDRTGYLLRLVEQDLARPAPKGRRRFASAHLLGKFESRGSTNAAVRAALKAHAQEDR*
Ga0074045_105986102	3300010341	Bog Forest Soil	MPPEKVAAIDRRAADSGLDRTKYLLRLVDQDLARPARRSKRRFASVHSLGRFRSRGSSNAQVRAALRAQSEKDR*
Ga0126379_109113151	3300010366	Tropical Forest Soil	MTQVISLRVRPKMLVEIDRRAADSGVDRSKYILRLVDQDLARRPPKSKRRFASVHLLGKFRSHGSSNA
Ga0136449_1004733014	3300010379	Peatlands Soil	MTHVVSLRMPPEKVAAVDRRATDCGLDRTKYLLRLVEQDLARPARKSKRRFASRHLLGRFRSRGSANAQVRAALKAQGEKDR*
Ga0134121_128494011	3300010401	Terrestrial Soil	MTHVVSLRMPLRKVAAVDRRAADAGLDRTGYILRLVEQDLARQAPKGRRRFASSHLLGKFHGGGSTNAQVRASLARKG
Ga0136851_101382192	3300010413	Mangrove Sediment	MPPEKVAAIDRRATDSGMDRTKYLLRLVDQDLARPGRKSKRRFASLHLLGRFASRGSSNAQVRAALKAQGDKDR*
Ga0137383_102217553	3300012199	Vadose Zone Soil	MTQVVSLRIPLKKVAAIDRRAVDSGLDRTKYILKLVDHDLAQPPRESKRRFASVKLLGKFRSHGSSNAQVRAALKAHGEEDR*
Ga0137382_100748791	3300012200	Vadose Zone Soil	MTRVVSLRMPFRKVAAVDRRAADAGLDRTGYILRLVEQDLAREAPKSRRRFASAHLLGKFHSTGSTNAQVRAALSRKGHGKNR*
Ga0137399_109411332	3300012203	Vadose Zone Soil	MTQVVSLRMPSKKVAAIDRRAADSGLDRTKYLLRLVEQDLGRPPSKSKRRFASSHLLGKFRSKGSSNAQIRAAIKAQVEKDR*
Ga0137399_113538032	3300012203	Vadose Zone Soil	DRRAADSGVDRTRYILRLVDQDLAQRTPKSKRRFASIHLLGRFRSQGSANAHVRAALKAQSEADS*
Ga0137362_104976242	3300012205	Vadose Zone Soil	MPLRKVAAVDRRAADAGLDRTGYILRLVEQDLARQAPKGRRRFASAHLLGKFHSTGSTNAQVRAALARKGHGKNR
Ga0137378_107682421	3300012210	Vadose Zone Soil	MTHVVSLRMPLRKVAAVDRRAADSGLDRTRYILRLVEQDLAREAPKNRRRFASLELLGKFPSSGSSNRQVRCALARRAREKNR*
Ga0137378_110747022	3300012210	Vadose Zone Soil	MPREKVAAIDRRASDSGLDRTKYLLRLVEEDLARPTPKSHRRFASARLLGKFRSKGSSNAEVRA
Ga0137377_101850404	3300012211	Vadose Zone Soil	KHSCMTHVVSLRMAQKKVAAIDRRAADAGLDRTKYLLRLVDADLAQKAPKSTRRFASLHLLGKFHSKGSTNSRVRAALRAQCEKDR*
Ga0137377_110793811	3300012211	Vadose Zone Soil	MPAEKVAAIDRRAADSGLNRTKYLLRLVDEDLARPAARSMRRFASAQFLGKFRAKGSSNAAVRAALKADGEKDR*
Ga0150985_1086590512	3300012212	Avena Fatua Rhizosphere	VVSLRMPHKKVAAIDRRAADAGLDRTKYLLRLVYADLAQSAPKSPRRFASLHLLGKFRSKGSTNADVRAALRMFGKKDR*
Ga0150985_1128321981	3300012212	Avena Fatua Rhizosphere	MTQVISLRMPPRKLAELDRKAADSGMDRSKYLLRLLDDDLARPTTESKRRFASLHLIGNFKSKGSSNAQVRAALKAHSEKDR*
Ga0137387_112539762	3300012349	Vadose Zone Soil	MPLRKLAAVDRRAADAGLDRTGYILRLVEQDLARQAPTVRRRFASTHLLGKFRSTGSTNAQVRAALAR
Ga0137371_113050261	3300012356	Vadose Zone Soil	NVVSLRMPPKKVAAVDRRAADSGLDRTKYILRLVDQDLAKPAPKSKRRFASLHLLGKFQSQGSSNAQIRAALKARCEQDR*
Ga0137360_102035123	3300012361	Vadose Zone Soil	MTHVVSLRMPLRKVAAVDRRAADAGLDRTGYILRLVEQDLARQAPKGRRRFASAHLLGKFHSSGSTNAQVRAALARKAHGKNR*
Ga0137361_104946333	3300012362	Vadose Zone Soil	DRRAADSGLDRTKYLLRLVEEDLARRSPKARRRFASTHLIGKFRSSGSSNAAIRAAVKLHVEKDR*
Ga0150984_1179086921	3300012469	Avena Fatua Rhizosphere	QVISLRMPPRKLAELDRKAADSGMDRSKYLLRLLDNDLARPTTESKRRFASLHLIGNFKSKGSSNAQVRAALKAHSEKDR*
Ga0150984_1181218972	3300012469	Avena Fatua Rhizosphere	DRRAADAGLDRTKYLLRLVYADLAQSAPKSPRRFASLHLLGKFRSKGSTNADVRAALRMFGKKDR*
Ga0137398_108937042	3300012683	Vadose Zone Soil	MTHVVSLRMPLRKVAAIDRRAADSGLDRTKYLMRLVDKDLAGPAPKLKQKFASGHLLGRFRSKGSTNPEVRAAMKAHCEKDR*
Ga0137397_108248781	3300012685	Vadose Zone Soil	MTHVVSLRMPLRKVAAVDRRAADAGLDRTGYILRLVEQDLARQAPKGRRRFASAHLLGKFHSTGSANSQVRAALARQVHGKNR*
Ga0137397_113122172	3300012685	Vadose Zone Soil	MPLSKVAAIDRRATDSGLDRTKYILRLVEKDLAQPTPKSKRRFASGHLLGKFRSKGSSNAQVRAALKAQSEKDR*
Ga0137396_105628852	3300012918	Vadose Zone Soil	MTQVVSLRMPSKKVAAIDRRAADSGLDRTKYLLRLVEQDLGRPPSKSKRRFASSHLLGKFRSKGSSNAQIRAAIKA
Ga0137394_101795962	3300012922	Vadose Zone Soil	MPFRKVAAVDRRAADAGLDRTGYILRLVERDLARQAPKGRRRFASAHLLGKLHSTGSTNAQVRAALSRKGHGKNR*
Ga0137359_101287982	3300012923	Vadose Zone Soil	MTRVVSIRMPFRKVAAVDRRAADAGLDRTGYILRLVEQDLARQAPKGRRRFASAHLLGKLHSTGSTNAQVRAALSRKGHGKNR*
Ga0137359_102075252	3300012923	Vadose Zone Soil	MPREKVAAIDRRAADSGVDRTKYLLRLVEEDLARRAPKQKRRFASIHLLGKFQSKGSSNAQVRAAVKSQGEKDC*
Ga0137359_117333072	3300012923	Vadose Zone Soil	CMTHVVSVRMPLRKLAAVDRRAADAGLDRTGYILRLVEQDLARQAPTVRRRFASTHLLGKFRSTGSTNAQVRAALAREGHGKNR*
Ga0137419_118846141	3300012925	Vadose Zone Soil	MPFRKVAAVDRRAADAGLDRTGYILRLVERDLARQAPKGRRRFASAHLLGKFHSTGSTNAQVRAALSRKGHGKNR*
Ga0137416_109819133	3300012927	Vadose Zone Soil	TQVVSLRMPSKKVAAIDRRAADSGLDRTKYLLRLVEQDLGRPPSKSKRRFASSHLLGKFRSKGSSNAQIRAAIKAQVEKDR*
Ga0137407_123265812	3300012930	Vadose Zone Soil	MTHVVSLRMPLRKVAAVDRRAADAGLDRTGYILRLGEQDLARQAPKGRRRFASAHLLGKFHSSGSTNAQVRAALARKAHGKNR*
Ga0182010_106969671	3300014490	Fen	KVATIDRRAADSGLDRTKYLLRLVDQDLARPARRTKRRFASLHLLGRFRSRGSSNAQVRAALRAQGEKDR*
Ga0182014_100476402	3300014491	Bog	MTQVISLRVPSGKVAAIDRRALDAGLDRTKYLLRIVDEDLARSVPKSKRRFASTRLLGKFRSAGSSNAAVRAALKAQSDKDR*
Ga0182021_127572081	3300014502	Fen	MPPKKVAAIDRRATDSGLDRTKYLLRLVDQDLARPARTSKRRFASLHLLGRFRSRGSSNAQVRAALRAQGEKDR*
Ga0182021_136881771	3300014502	Fen	MPPEKVAAIDRRATDSGLDRTKYLLRLVDQDLARPAGRSKRRFASLHLLGRFRSRGSSNAQVRAALRAQGET
Ga0137409_101298332	3300015245	Vadose Zone Soil	MPFRKVAAVDRRAADAGLDRTGYILRLVEQDLARQAPKGRRRFASAHLLGKFHSTGSANSQVRAALARQVHGKNR*
Ga0137403_116281281	3300015264	Vadose Zone Soil	LGKVAAIDRRAADAGLDRTGYILRLVEQDLARPAPKRRRRFASSQLLGKFRSSGSSNPEVRAALVRARHEKDS*
Ga0182033_104552413	3300016319	Soil	VAAIDRQAADAGLDRTKYLLRLVDEDLARSRNPRTRKRFASVHLLGKFKSKGSSNTAIRAALKVRSEEDR
Ga0182037_112310692	3300016404	Soil	TGLTKGRPGCKQNCMTQVVSLRVPQDKVAAIDRQAADAGLDRTKYLLRLVDEDLARSRNPRTRKRFASVHLLGKFKSKGSSNTAIRAAFKVRSEEDR
Ga0182039_102160351	3300016422	Soil	GREERKKTGLTKGRPGCKQNCMTQVVSLRVPQDKVAAIDRQAADAGLDRTKYLLRLVDEDLARSRNPRTRKRFASVHLLGKFKSKGSSNTAIRAALKVRSEEDR
Ga0187878_13541171	3300018005	Peatland	KQHCMTQVISLRVASGKAAAIDRRAVDAGLDRTKYLLRLVDEDLARPAPKSKRRFASLHLLGKFRSRGSSNAAVRAALKAQSEKDCSLYGGSN
Ga0187866_12854731	3300018015	Peatland	RRKQHCMTQVISLRVPSGKVAAIDRRAVDAGLDRTKYLLRLVDEDLARPAPKSKRRFASLHLLGKFRSRGSSNAAVRAALKAQSEKDCSLYGGSN
Ga0187882_12919241	3300018021	Peatland	FGKCCKHKCMTHVVSLRMPPKKVAAIDRRAADSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAALRAQGEEDR
Ga0187869_104541812	3300018030	Peatland	MPPKKVAAIDRRAADSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAALRVQGEKDR
Ga0187863_105968362	3300018034	Peatland	CKHKCMTHVVSLRMPPKKVAAIDRRATDSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAALRAQSEKDR
Ga0187890_102014801	3300018044	Peatland	MPPKKVAAIDRRATDSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFPSRGSSNSQVRAALRAQGET
Ga0187858_105989232	3300018057	Peatland	KHKCMTHVVSLRMPPKKVAAIDRRATDSGLDRTRYLLRLVDQDLARPARKSKRRFASLHLLGRFRSRGSSNAQVRAALRVQGEKDR
Ga0184628_101361312	3300018083	Groundwater Sediment	MTHVVSLRMPLRKVAAVDRRAADAGLDRTGYILGLVDQDLARQAPRGRRRFASAHLLGKFHSAGSTNAEVRATLARKRHGKNR
Ga0197853_10150081	3300019775	Enriched Sediment	MTHVVSLRMPPEKVAAIDRRATDSGLDRTKYLLRLVDQDLARPARPSKRRFASLHLLGRFRSRGSSNAQVRAALKAQGEEDR
Ga0193718_10310281	3300019999	Soil	MPLRKVAAVDRRAADAGLDRTHYILRLVEQDLARQAPKGRRRFASSHLLGKFPSAGSSNAQVRAALARKGHDKNR
Ga0193755_11559582	3300020004	Soil	MTHVVSLRMPLRKVAAVDRRAADAGLDRTGYILRLVEQDLARQAPKGRRRFASAHLLGKFHSAGSANSQVRAALARQVHGKNR
Ga0194039_10035003	3300020163	Anoxic Zone Freshwater	MPPKKVAAIDRRATDSGLNRTKYLLHLVDQDLARPARKSKRQFASLHLLGRFRSRGSSNAQVRTALRAQGEKDR
Ga0224534_10133215	3300022524	Soil	MTQVISLRVPSGKVAAIDRRALDAGLDRTKYLLRIVDEDLARSVPKSKRRFASTRLLGKFRSAGSSNAAVRAALKAQSDKDR
Ga0247671_10320022	3300024284	Soil	MTEVISVRMPSKKVAEIDRRAADSGLDRSKYLLRLVEQDLAHAAPKTRRRFASTHLLGKFRSSGSSNAAVRAAMRAHVAKDR
Ga0209746_10344232	3300025716	Arctic Peat Soil	MTHVVSLRMPPKQVAAIDRRATDSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVSDALRAQGEKDR
Ga0209638_10798412	3300025725	Arctic Peat Soil	MTHVVSLRMPPKQVAAIDRRATDSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAALRAQGEKDR
Ga0209226_102942892	3300025865	Arctic Peat Soil	LGNYCKHKCMTHVVSLRMPPKQVAAIDRRATDSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAALRAQGEKDR
Ga0209540_102738671	3300025888	Arctic Peat Soil	MTHVVSLRMPPKQVAAIDRRATDSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAAL
Ga0207702_107143462	3300026078	Corn Rhizosphere	MASKKVAAIDRKAADSGLDRTKYLLRLVDEDLREISKPKRRFASAHLLGKFQSKGSTNTAVRAALKSQSEEDC
Ga0209438_10716132	3300026285	Grasslands Soil	MAQILRDITQVITLRMPSDKVAAIDRRATDSGFDRSKYLLPLVEQDLARPAPKSRRSFASAHLVGKFRSRGSSNAAIRAGTKARSKKDL
Ga0209293_107871042	3300027877	Wetland	MTQVISLRVPPGKVAAIDRRAADSGLDRTNYLLRLVEEDLMRPVPKSKRRFASVHLLGKFRSRGSSNAAVRAALKSQGEKDR
Ga0209777_108681691	3300027896	Freshwater Lake Sediment	MPPEKVAAIDRRAADSGLDRTKYLLRLVDQDLARPARRSERRFASLHLLGRFRSRGSSNAQVRAALRAQGETTVDRKDFIV
Ga0209488_106461602	3300027903	Vadose Zone Soil	MTQVVSLRIPLSKVAAIDRRATDSGLDRTQYILRLVEKDLAQPTPKSRRRFASGHLLGKFKSKDSSNPQVRAALKAQ
Ga0207428_107491791	3300027907	Populus Rhizosphere	VVSLRMPSGKVAAIDRRAADSGLDRSKYLLRLVEQDLARPMPKSRRRFASVHLLGKFRSHGSSNAAIRAAMKAHIEKDR
Ga0170834_1132661101	3300031057	Forest Soil	RMPAEKVAAIDRRAADSGLDRTNYLLRLVDEALSRPATQSKRRFASGHLLGKFRSQGSSNAAVRTALKSRHEKDR
Ga0170822_163169021	3300031122	Forest Soil	AIDRRAADSGLDRTNCLLRLVDEALSRPATKSKRRFASGHLLGKFRSQGSSNAAVRTALKSRHEKDR
Ga0170824_1241232313	3300031231	Forest Soil	VAAIDRRAADSGLDRTNYLLRLVDEALSRPATQSKRRFASGHLLGKFRSQGSSNAAVRTALKSRHEKDR
Ga0316576_102873952	3300031727	Rhizosphere	MTHVVSLRMPPEKVAAIDRRANDSGVDRTRYLLRLVDQDLARPARRSRRRFASVHLLGRFHSRGSSNPQARAALKAQSEKDR
Ga0307475_112275272	3300031754	Hardwood Forest Soil	SVAFPEPLCKRLRMTHVVSLRVPLRQVAAIDRRAANAGLDRTSYILRLVEQDLARPSPKRRRRFASSHLLGKFRGSGSSNLQVRAALARARHEKNR
Ga0318546_104956092	3300031771	Soil	MTQVVSLRVPQDKVAAIDRQAADAGLDRTKYLLRLVDEDLARSRNPRTRKRFASVHLLGKFKSKGSSNTAIRAALKVRSEEDR
Ga0315290_108235751	3300031834	Sediment	MTHVVSLRMPPKKVAAIDRRATDSGLDRTKYLLRLVDQDLARPARKSKRRFASLHLLGRFHSRGSLNAQVRAALRAQGEKDR
Ga0306919_110247672	3300031879	Soil	MTQVVSLRVPQDKVAAIDRQAADAGLDRTKYLLRLVDEDLARSRNPRTRKRFASVHLLGKFKSKGSSNTAIRAA
Ga0306926_105836743	3300031954	Soil	LTKGRPGCKQNCMTQVVSLRVPQDKVAAIDRQAADAGLDRTKYLLRLVDEDLARSRNPRTRKRFASVHLLGKFKSKGSSNTAIRAALKVRSEEDR
Ga0318575_104830372	3300032055	Soil	GWEERRKTGLTKGRPGCKQNCMTQVVSLRVPQDKVAAIDRQAADAGLDRTKYLLRLVDEDLARSRNPRTRKRFASVHLLGKFKSKGSSNTAIRAALKVRSEEDR
Ga0315292_106553652	3300032143	Sediment	LGKCCKHKCMTHVVSLRMPPKKVAAIDRRATDSGLDRTKYLLRLVDQDLARPARKSKRRFASLHLLGHFRSRGSSNVQVRAALKAQGEKDR
Ga0315283_113234042	3300032164	Sediment	RRALDAGLDRTKYLLRIVDEDLARPAPKSKRRFASLHLLGKFRSRGSSNAAVRAALKAQSEKDR
Ga0307471_1035438832	3300032180	Hardwood Forest Soil	MRMTQVVSLRMKPEKVAAVDRKAADSGLDRTKYILRLVDQDLARPTAKTRRRFASIHLLGKFRSQGSSNAEVRAALKAVNEKNR
Ga0315271_108088702	3300032256	Sediment	AAIDRRATDSGLDRTKYLLRLVDQDLARPARKSKRRFASLHLLGRFRSRGSLNAQVRAALRAQGEKDR
Ga0335085_119774182	3300032770	Soil	MTQVISLRVPSEKVAAIDRRAADAGLDRTKYLLRVVDEDLARPAPRSKRRFASLHLLGKFHSRGSSNVAVRAALKVQSEKDR
Ga0335080_111395532	3300032828	Soil	MTQVISLRVPSEKVAAIDRRAADAGLDRTKYLLRVVDEDLARPAPRSKRRFASLHLLGKFRSRGSSN
Ga0335081_117909181	3300032892	Soil	MTQVISLRVPSEKVAAIDRRAADAGLDRTKYLLRVVDEDLARPAPRSKRRFASLHLLGKFRSRGSSNVAVRAALKVQSEKDR
Ga0335069_107077751	3300032893	Soil	AALDRRAADSGLNRTRYLLRLVEQDLAAFAPASRRRFACLHLLGRFRSRGSTNAAARAALKAHAQEDR
Ga0335069_116477701	3300032893	Soil	VAAIDRRATDSGLDRTKYLLRLVDQDLAQPARKSNRRFASAHLLGRFASRGSSNARARAALKAQSEKDR
Ga0326728_1000013077	3300033402	Peat Soil	MTHVVSLRMPLEKVAAVDRRATDCGLDRTKYLLRLVEQDLARPARKSKRRFASRRLLGRFRSRGSSNAQVRAALKAQGEKDR
Ga0316629_108248942	3300033483	Soil	MPPDKVAAIDRRATDSGMPRTKYLLRLVDQELARPSRKSRRRFASLHLLGRFSSRGSSNAQVRAALKAKGDEDR
Ga0316628_1031119441	3300033513	Soil	MTHVVSLRMPPKKVAAIDRRAADSGLDRTKYLLRLAEQDLARPARRSKRRFASQHLMGRFRSRGSSNAQVRAALRAQGEKDR
Ga0316628_1041852542	3300033513	Soil	KLYCMTQVFSFRVPAEKVAAIDRRAADAGLDRTKYLLRVVDEDLARPAPKVKRRFASGHLLGKFRSRGSSNAAVRAALKAQGEQDR
Ga0316616_1006886031	3300033521	Soil	RWACCKHKCMTQVVSLRMPPDKVAAIDRRATDSGMPRTKYLLRLVDQELARPSRKSRRRFASLHLLGRFSSRGSSNAQVRAALKAKGDEDR
Ga0316616_1018099843	3300033521	Soil	MTQVISLRMPPAKVAAIDQRAAGSGLDRTKYLRRLVDEDLARPAPKSKRRFASVHLLGRFRSQGSSNAAVRAALKSRGEQDR
Ga0316617_1017462202	3300033557	Soil	MTQVISLRVPPRKAAAIDRRAADSGLDRTNYLLRLVEEDLMRPVPKSKRRFASVHLLGKFRSRGSSNAAVRAALKSQGEKDR
Ga0371489_0001591_31699_31923	3300033755	Peat Soil	MPLEKVAAVDRRATDCGLDRTKYLLRLVEQDLARPARKSKRRFASRRLLGRFRSRGSSNAQVRAALKAQGEKDR
Ga0334837_021483_669_893	3300033823	Soil	MPPEKVAAIDRRATDSGLDRTKYLLRLVDQDLARTARRSKRRFASLHLLGRFRSRGSSNARVRAALRAQGEKDR
Ga0370490_0213563_313_561	3300034128	Untreated Peat Soil	MTHVVSLRMPPEKVAAIDRRATDSGVDRTKYLLRLVDQDLAQPARRSKRRFASLHLLGQFRSRGSSNAPVRAALKAQSEEDR
Ga0370490_0290082_263_511	3300034128	Untreated Peat Soil	MTHVVSLRMPPKKVAAIDRRAADSGLDRTKYLLRLVDQDLARPARRSKRRFASLHLLGRFRSRGSSNAQVRAALRAQGEKDR
Ga0372943_0851868_178_426	3300034268	Soil	MTQVISLRMPSEKVAAIDRRAADAGLDRTKYLLRLVEQHLGQSEPKTKRRFASVHLLGKFGSSGSSNAAVRAAMRAHVQKDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066909

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences