Metagenome / Metatranscriptome Family F066898

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066898
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	61 residues
Representative Sequence	MTTQTQNALHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG
Number of Associated Samples	64
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.40 %
% of genes near scaffold ends (potentially truncated)	35.71 %
% of genes from short scaffolds (< 2000 bps)	84.13 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.254 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (40.476 % of family members)
Environment Ontology (ENVO)	Unclassified (41.270 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (62.698 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.78% β-sheet: 0.00% Coil/Unstructured: 72.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00069	Pkinase	13.11
PF00082	Peptidase_S8	9.02
PF00854	PTR2	6.56
PF01242	PTPS	6.56
PF02661	Fic	3.28
PF09826	Beta_propel	2.46
PF13847	Methyltransf_31	2.46
PF08241	Methyltransf_11	1.64
PF13649	Methyltransf_25	1.64
PF13478	XdhC_C	1.64
PF13620	CarboxypepD_reg	0.82
PF13419	HAD_2	0.82
PF07714	PK_Tyr_Ser-Thr	0.82
PF14559	TPR_19	0.82
PF12728	HTH_17	0.82
PF00144	Beta-lactamase	0.82
PF01844	HNH	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	55.74
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	6.56
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	6.56
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.82
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.65 %
Unclassified	root	N/A	31.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	33.33 %
Unclassified	root	N/A	31.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	33.33 %
Unclassified	root	N/A	31.75 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	3.17 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	22.22 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	3.17 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	18.25 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	3.17 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	16.67 %
unclassified Aeromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → unclassified Aeromonas	3.17 %
Desulfacinum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfacinum	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	16.67 %
Aeromonas sp. FDAARGOS 1407	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → unclassified Aeromonas → Aeromonas sp. FDAARGOS 1407	3.17 %
Desulfacinum hydrothermale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfacinum → Desulfacinum hydrothermale	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Aeromonas sp. FDAARGOS 1407	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → unclassified Aeromonas → Aeromonas sp. FDAARGOS 1407	3.17 %
Anaeromyxobacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	2.38 %
Anaeromyxobacter paludicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter paludicola	0.79 %
Desulfacinum hydrothermale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfacinum → Desulfacinum hydrothermale	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101309632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	744	Open in IMG/M
3300003887\|Ga0062443_1010485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	18407	Open in IMG/M
3300003887\|Ga0062443_1010485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	18407	Open in IMG/M
3300003887\|Ga0062443_1010485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	18407	Open in IMG/M
3300004151\|Ga0066602_10270836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	747	Open in IMG/M
3300004155\|Ga0066600_10520190	Not Available	583	Open in IMG/M
3300005827\|Ga0074478_1870640	Not Available	2114	Open in IMG/M
3300005833\|Ga0074472_10854707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	695	Open in IMG/M
3300006224\|Ga0079037_101445899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	686	Open in IMG/M
3300009091\|Ga0102851_10930564	Not Available	940	Open in IMG/M
3300009111\|Ga0115026_11376022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter paludicola	582	Open in IMG/M
3300009131\|Ga0115027_11696782	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	525	Open in IMG/M
3300009167\|Ga0113563_10590045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1229	Open in IMG/M
3300009167\|Ga0113563_10629823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1193	Open in IMG/M
3300009179\|Ga0115028_10059110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1982	Open in IMG/M
3300009179\|Ga0115028_10416156	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300009179\|Ga0115028_10748243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfacinum → Desulfacinum hydrothermale	753	Open in IMG/M
3300009179\|Ga0115028_11446307	Not Available	580	Open in IMG/M
3300013315\|Ga0173609_11070461	Not Available	707	Open in IMG/M
3300020064\|Ga0180107_1088887	Not Available	528	Open in IMG/M
3300021354\|Ga0194047_10099501	Not Available	1239	Open in IMG/M
3300021602\|Ga0194060_10079319	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300021602\|Ga0194060_10272673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	843	Open in IMG/M
3300027715\|Ga0208665_10102077	Not Available	882	Open in IMG/M
3300027796\|Ga0209373_10162435	Not Available	971	Open in IMG/M
3300027841\|Ga0209262_10094524	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300027871\|Ga0209397_10319129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → unclassified Aeromonas → Aeromonas sp. FDAARGOS 1407	746	Open in IMG/M
3300027877\|Ga0209293_10726080	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300027890\|Ga0209496_10254833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	861	Open in IMG/M
3300027890\|Ga0209496_10712231	Not Available	550	Open in IMG/M
3300027890\|Ga0209496_10742887	Not Available	539	Open in IMG/M
3300027897\|Ga0209254_10083612	All Organisms → cellular organisms → Bacteria	2708	Open in IMG/M
3300027899\|Ga0209668_10400680	Not Available	898	Open in IMG/M
3300027900\|Ga0209253_10016598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6257	Open in IMG/M
3300027900\|Ga0209253_10099203	All Organisms → cellular organisms → Bacteria → Proteobacteria	2386	Open in IMG/M
3300027900\|Ga0209253_10506302	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300027900\|Ga0209253_10653810	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	764	Open in IMG/M
3300027902\|Ga0209048_10010103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	8490	Open in IMG/M
3300027902\|Ga0209048_10283621	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300028869\|Ga0302263_10171068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300029984\|Ga0311332_10589118	Not Available	878	Open in IMG/M
3300030010\|Ga0302299_10251501	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300030294\|Ga0311349_11035906	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300031232\|Ga0302323_103303868	Not Available	514	Open in IMG/M
3300031722\|Ga0311351_11083815	Not Available	614	Open in IMG/M
3300031726\|Ga0302321_100745604	All Organisms → cellular organisms → Bacteria → Proteobacteria	1101	Open in IMG/M
3300031726\|Ga0302321_100819230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1051	Open in IMG/M
3300031746\|Ga0315293_10821494	Not Available	679	Open in IMG/M
3300031772\|Ga0315288_10373612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1456	Open in IMG/M
3300031873\|Ga0315297_10184738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1710	Open in IMG/M
3300031873\|Ga0315297_11137246	Not Available	642	Open in IMG/M
3300031918\|Ga0311367_10862059	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300031918\|Ga0311367_11458554	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300031918\|Ga0311367_12255852	Not Available	521	Open in IMG/M
3300031997\|Ga0315278_10051627	All Organisms → cellular organisms → Bacteria → Proteobacteria	4030	Open in IMG/M
3300031997\|Ga0315278_11551032	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031999\|Ga0315274_10279594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2008	Open in IMG/M
3300032018\|Ga0315272_10568562	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300032053\|Ga0315284_10376009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	1761	Open in IMG/M
3300032053\|Ga0315284_10748814	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300032143\|Ga0315292_10222182	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1552	Open in IMG/M
3300032143\|Ga0315292_11640977	Not Available	517	Open in IMG/M
3300032164\|Ga0315283_10275504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1822	Open in IMG/M
3300032164\|Ga0315283_10604005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1188	Open in IMG/M
3300032164\|Ga0315283_10937917	Not Available	920	Open in IMG/M
3300032164\|Ga0315283_11466685	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300032177\|Ga0315276_11510783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	699	Open in IMG/M
3300032256\|Ga0315271_10481404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1050	Open in IMG/M
3300032275\|Ga0315270_10195373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	1239	Open in IMG/M
3300032397\|Ga0315287_10068161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	3962	Open in IMG/M
3300032397\|Ga0315287_10220379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2220	Open in IMG/M
3300032397\|Ga0315287_10650268	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300032397\|Ga0315287_11320812	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300032397\|Ga0315287_12506168	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300033406\|Ga0316604_10052074	Not Available	2105	Open in IMG/M
3300033406\|Ga0316604_10052074	Not Available	2105	Open in IMG/M
3300033406\|Ga0316604_10780429	Not Available	525	Open in IMG/M
3300033408\|Ga0316605_10274471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1465	Open in IMG/M
3300033408\|Ga0316605_10451489	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300033408\|Ga0316605_10595356	Not Available	1032	Open in IMG/M
3300033408\|Ga0316605_11241939	Not Available	720	Open in IMG/M
3300033408\|Ga0316605_11829976	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300033408\|Ga0316605_12283752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → unclassified Aeromonas → Aeromonas sp. FDAARGOS 1407	526	Open in IMG/M
3300033413\|Ga0316603_10787458	Not Available	892	Open in IMG/M
3300033413\|Ga0316603_10987213	Not Available	795	Open in IMG/M
3300033413\|Ga0316603_11015911	Not Available	783	Open in IMG/M
3300033413\|Ga0316603_11528151	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300033414\|Ga0316619_10065390	Not Available	2149	Open in IMG/M
3300033414\|Ga0316619_10569251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	936	Open in IMG/M
3300033414\|Ga0316619_10921052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	756	Open in IMG/M
3300033416\|Ga0316622_100884801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1040	Open in IMG/M
3300033418\|Ga0316625_100293320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1152	Open in IMG/M
3300033418\|Ga0316625_100745391	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300033418\|Ga0316625_100888332	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300033418\|Ga0316625_101539670	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300033418\|Ga0316625_102659102	Not Available	509	Open in IMG/M
3300033419\|Ga0316601_100710367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	987	Open in IMG/M
3300033419\|Ga0316601_100921429	Not Available	869	Open in IMG/M
3300033434\|Ga0316613_10020271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3681	Open in IMG/M
3300033434\|Ga0316613_10020271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3681	Open in IMG/M
3300033434\|Ga0316613_10192235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1312	Open in IMG/M
3300033434\|Ga0316613_10474303	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300033434\|Ga0316613_10788893	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300033481\|Ga0316600_10354037	Not Available	999	Open in IMG/M
3300033481\|Ga0316600_10366552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	983	Open in IMG/M
3300033481\|Ga0316600_10977383	Not Available	599	Open in IMG/M
3300033482\|Ga0316627_101879256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	618	Open in IMG/M
3300033482\|Ga0316627_101910407	Not Available	613	Open in IMG/M
3300033483\|Ga0316629_11609458	Not Available	532	Open in IMG/M
3300033485\|Ga0316626_11694834	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300033488\|Ga0316621_10269668	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300033488\|Ga0316621_10668167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	747	Open in IMG/M
3300033488\|Ga0316621_11522061	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300033488\|Ga0316621_11560996	Not Available	508	Open in IMG/M
3300033513\|Ga0316628_100828972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1221	Open in IMG/M
3300033521\|Ga0316616_100098773	Not Available	2565	Open in IMG/M
3300033521\|Ga0316616_100262280	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300033521\|Ga0316616_100842518	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300033521\|Ga0316616_101847672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	795	Open in IMG/M
3300033521\|Ga0316616_102206404	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300033521\|Ga0316616_103097537	Not Available	626	Open in IMG/M
3300033521\|Ga0316616_104453041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → unclassified Aeromonas → Aeromonas sp. FDAARGOS 1407	527	Open in IMG/M
3300033557\|Ga0316617_100027813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	3124	Open in IMG/M
3300033557\|Ga0316617_102013599	Not Available	593	Open in IMG/M
3300033557\|Ga0316617_102673552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → unclassified Aeromonas → Aeromonas sp. FDAARGOS 1407	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.79%
Aquatic	Environmental → Aquatic	48.41%
Wastewater	Engineered → Wastewater	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	46.03%
Soil	Environmental → Terrestrial → Soil	40.48%
Peat	Environmental → Terrestrial → Peat	9.52%
Sediment	Environmental → Aquatic → Sediment	1.59%
Marine	Environmental → Aquatic → Marine	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.79%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.79%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	40.48%
Lake	Environmental → Aquatic → Freshwater → Lake	21.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.52%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.17%
Pond	Environmental → Aquatic → Freshwater → Pond	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.59%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.79%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	40.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	19.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.52%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.35%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.17%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.59%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	40.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	19.05%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	9.52%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	8.73%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.35%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.17%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	3.17%
Anaerobic Enrichment Culture	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture	2.38%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.38%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.79%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003887	Freshwater pond sediment microbial communities from Middleton WI, HM 5/6 enriched by Humin under anaerobic conditions -HM Sample 3	Environmental	Open in IMG/M
3300004151	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300020064	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027796	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1013096322	3300001213	Wetland	QTLHFNVTRHGWKDAFVVSFLALVLGAFVAQISATPQHASAPPPVASATLNAASNG*
Ga0062443_10104851	3300003887	Anaerobic Enrichment Culture	MTTQTQNPTTLHFHVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKHSFASPPMASAPLNATSNG*
Ga0062443_101048511	3300003887	Anaerobic Enrichment Culture	MTNQNQNPTTPHFHVSKHGWKDLFVVSFLAIVLGSFVAQISSAPKHTSASPPMASAPLNATSNG*
Ga0062443_10104858	3300003887	Anaerobic Enrichment Culture	MTTQTQKTIHFNVSKSTGWKDAFVVTCLAIVLGAFVAQISSTPDHSRTAQPMASVSATAAVNG*
Ga0066602_102708362	3300004151	Freshwater	TMTTQTRNSIHFNVSKSHGWKDLFVVASLAIVLGAFVAQISSTPKHSSGSLPMAAASATVSQSG*
Ga0066600_105201901	3300004155	Freshwater	MTTQTQKTISFNVSKATGWKDLFVVASLAIVLGAFVAQISSTPKHSSEPVPMASVSATAAVNG*
Ga0074478_18706402	3300005827	Sediment (Intertidal)	MTTQTQKTIHFNVSRHGWKDLFVVSFLAIVIGAFVAQISSTPKHSSASQPVASAPLNATSHG*
Ga0074472_108547071	3300005833	Sediment (Intertidal)	MTTQTQKTIRFNVSKSTGWRDAFVVSCLAIVLGAFVAQISSTPKHSPGSVPMASVSATAATNG*
Ga0079037_1014458992	3300006224	Freshwater Wetlands	MTTQNEKNLHFNVSKHGWKDLFVISFLVIVLGAFVAQISSTPKHTSAPPPMASVSATAATNG*
Ga0102851_109305642	3300009091	Freshwater Wetlands	MTTQTQNALHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG*
Ga0115026_113760221	3300009111	Wetland	SIHFNVSKSHGWKDLFVVASLAIVLGAFVAQISSTPKHSPGSLPMASVSATAATNG*
Ga0115027_116967821	3300009131	Wetland	MTTKTRNSIHFNVSKSHGWNDLFVVASLAIVLGAFVAQISSTPKHSSGSLPMA
Ga0113563_105900452	3300009167	Freshwater Wetlands	MTTQTQNALHFNVTKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG*
Ga0113563_106298232	3300009167	Freshwater Wetlands	VSKSHGWKDAFVVSCLAIVLGAFVAQISSTPKHSSGSRPMAAVSTTVSQNG*
Ga0115028_100591103	3300009179	Wetland	MTTQTRQTLHFNVSKHAWKDLFVVSFLAIVLGAFVAQISSSPKQSSASQPVASAPLNTTSNG*
Ga0115028_104161562	3300009179	Wetland	MTTQNQNPTTLHFHVSKHGWKDLFVVSFLAIVLGSFVAQISSTPKHTSASQPMASAPLNATSNG*
Ga0115028_107482431	3300009179	Wetland	TRTTLRFHVTKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG*
Ga0115028_114463071	3300009179	Wetland	NAMTTQTRNALHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKHSFASPPMASAPLNATSNG*
Ga0173609_110704612	3300013315	Sediment	MTTQTQTTLHFNVTKHGWKDLFVVSFLAIVLGAFVAQISSTQTHSRASQPMASAPLNATLNG*
Ga0180107_10888872	3300020064	Groundwater Sediment	TQTHTTLHFNVSKHGWKDLFVVSFLAIVLGAFVAQISTPTHSPGSEPMAAVYASATTNR
Ga0194047_100995012	3300021354	Anoxic Zone Freshwater	MTTQTQTTLRFHVSKHGWKDAFVVSFLALVLGAFVAQISSTPRNAPTSQPMASVSAAAAVNG
Ga0194060_100793192	3300021602	Anoxic Zone Freshwater	MTTQTQTTLRFHVSKHGWKDAFVVSFLAIVLGAFVAQISSTPRNAPGSQPMASVSAAAAVNG
Ga0194060_102726732	3300021602	Anoxic Zone Freshwater	MTARTWKTIGLNVSKSHGWKDAFVVSVLAIVLGAFVTQISAAPRHSSASQRLVSASVTVAVNG
Ga0208665_101020772	3300027715	Deep Subsurface	MTTQTQNALHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG
Ga0209373_101624352	3300027796	Freshwater	MTTQTPNTIHFGKLGKGRGWKDLFVVASLAIVLGAFVAQISSTPKHSSGSLPMAAASATVSQSG
Ga0209262_100945242	3300027841	Freshwater	MTSRTRNSIHFNVSKSHGWKDLFVVASLAIVLGAFVAQISSIPKHSSGSLPMAAASATVSQSG
Ga0209397_103191291	3300027871	Wetland	MTTQTRKTISFNVSKSTSWRDAFVVSCLAIVLGAFVAQISSTPSSAQRTIPVATASSTVASQG
Ga0209293_107260801	3300027877	Wetland	HFNVSKSTGWKDAFVVSCLAIVLGAFVAQISSTPKHSPGSLPMASVSATAATNG
Ga0209496_102548332	3300027890	Wetland	MTTQNEKNLHFNVSKHGWKDLFVISFLVIVLGAFVAQISSTPKHTSAPPPMASVSATAATNG
Ga0209496_107122311	3300027890	Wetland	MTTQTQKSLHFNVSQHGWKDAFVVSFLAIVLGAFVAQISSTPKYTSGTQPMASVSATGTTSG
Ga0209496_107428871	3300027890	Wetland	TLHFHVTKHGWKDLFVVSFLAIVLGAFVAQISSTPKHSFASPPMASAPLNATSNG
Ga0209254_100836122	3300027897	Freshwater Lake Sediment	MTTQNSVHFNVSRSHGWKDALVVSFLAIVLGAFVAQISSTPKTTSDPQPMASVSATVAIY
Ga0209668_104006801	3300027899	Freshwater Lake Sediment	MTTQNSVHFNVSRSHGWKDALVVSFLAIVLGAFVAQISSTPKHSFASPPMASAPLNATQN
Ga0209253_100165982	3300027900	Freshwater Lake Sediment	MTTQSQMSIHFNVSKAHGWKDALVISFLLLVLGAFVAQISSTGKHSPGSQPVAAAAVTATLHG
Ga0209253_100992032	3300027900	Freshwater Lake Sediment	MTTRNQKTLQFHVTRHGWKDLFVISFLAIVLGAFVAQISSTPKHSSGSIPMASVSAAAAVNG
Ga0209253_105063021	3300027900	Freshwater Lake Sediment	SNPRHGTETAMTTRTQKTIRFNVSKSQGWRDAFVVGFLAIVLGAFVAQISSTPKHSSGSLPMASVSATVATNG
Ga0209253_106538102	3300027900	Freshwater Lake Sediment	MTTQSQMSIHFNLSKAHGWKDALVVGFLVTVLGAFVAQISSTGKRSP
Ga0209048_100101035	3300027902	Freshwater Lake Sediment	MTTQSQMSIHFNVSKAHGWKDALVVGFLVTVLGAFVAQISSTGKHSPGSQPVAAAAATATLHG
Ga0209048_102836213	3300027902	Freshwater Lake Sediment	MTTQNSVHFNVSRSHGWKDALVVSFLAIVLGAFVAQISSNPKTTSDPQPMASVSATVAIY
Ga0302263_101710682	3300028869	Fen	TQTQKSIHFNVSKSTGWKDAFVVSCLAIVLGAFVAQIASAPGPARTSPPVAAAMSATTAH
Ga0311332_105891181	3300029984	Fen	MTTQTQKTIHFNVSKSTGWKDAFVVSCLAIVLGAFVAQISTTPRGAQRSIPVATTSSTAASQG
Ga0311365_107592581	3300029989	Fen	KSTGWRDAFVVSCLAIVLGAFVAQISSPPDHSRGSVPMASVSAVSATNG
Ga0302299_102515011	3300030010	Fen	QTPTTLRFHVSKHGWKDAFVVSFLAIVLGAFVAQISSTPRNAPTSQPMAAVSAAAVVNG
Ga0311349_110359061	3300030294	Fen	VSKHGWKDAFVVSFLAIVLGAFVAQISSTPRNAPTSQPMAAVSAAAVVNG
Ga0302323_1033038682	3300031232	Fen	MTTQTQKTLHFNVSKHGWKDLFVVGFLAIVLGAFVAQISSTPRNASTSQPMASVSAAAVVNG
Ga0311351_110838152	3300031722	Fen	MTTQTQKTLHFNVSKHGWKDLFVVGFLAIVLGAFVAQISSTPKHTFASPPMASAPLNATSNG
Ga0302321_1007456042	3300031726	Fen	MTTQTPTTLRFHVSKHGWKDAFVVSFLAIVLGAFVAQISSTPRNASTSQPMASVSAAAVVNG
Ga0302321_1008192302	3300031726	Fen	MTTQTQKTIHFNVSKSTGWRDAFVVSCLAIVLGAFVAQISSPPDHSRGSVPMASVSAVSATNG
Ga0315293_108214942	3300031746	Sediment	MTTQTQKSIRFNVSKAHGWKDAFVVSFLAIVLGAFVAQISSTPKHSPGSEPVTVAAATTMYQG
Ga0315288_103736122	3300031772	Sediment	MTTQNSIHFNVSRSHGWKDAFVVSCLVIVLGAFVAQISSTPKSTSGSEPMASVTETVAIY
Ga0315297_101847382	3300031873	Sediment	MTTQSQMSIHFNVSRAHGWKDALVVGFLVTVLGAFVAQISSTGKHSPGSQPVAAAAATATLHG
Ga0315297_111372462	3300031873	Sediment	MTTQTQKSIRFNVSKAHGWKDAFVVSFLAIVLGAFVAQISSTPKHSPGSEPVTVAATTAA
Ga0311367_108620591	3300031918	Fen	RFHVSKHGWKDAFVVSFLAIVLGAFVAQISSTPRNAPTSQPMAAVSAAAVVNG
Ga0311367_114585541	3300031918	Fen	HFNVSKSTGWRDAFVVSCLAIVLGAFVAQISSPPDHSRGSVPMASVSAVSATNG
Ga0311367_122558521	3300031918	Fen	MMNRTWKTIGFNVSKSHGWKDAFVVSVLAIVLGAFVTQISAGPRHSSASQPVAGATVTVSTLG
Ga0315278_100516272	3300031997	Sediment	MTTQTQKSIRFNVSKAHGWKDAFVVSFLAIVLGAFVAQISSTPKHSPGSEPVTVAATTTMYQG
Ga0315278_115510321	3300031997	Sediment	MTTQNSIHFNVSKSHGWKDALVVTCLAIVLGAFVAQISSTPKSTSASQPMATVTETVAIH
Ga0315274_102795942	3300031999	Sediment	MTTQSQMSIHFNVSKAHGWKDALVVSFLLIVLGAFVAQISSTGKYSPGSQPVATAAATATLHG
Ga0315272_105685622	3300032018	Sediment	MTTQNSLHFNVSRSHGWKDALVVSCLAIVLGAFVAQISSTPKTTSDPQPMASVSATVAIY
Ga0315284_103760092	3300032053	Sediment	MTTQTQKSIRFNVSKAHGWKDAFVVSFLAIVLGAFVAQISSTPKHSPGSEPVTVAATTTAYQG
Ga0315284_107488143	3300032053	Sediment	MTTQTQKSIHFNVSKSHGWKDALVVSCLAIVLGAFVAQISSTPETTSGSRPMASVSATAAING
Ga0315292_102221821	3300032143	Sediment	MTTQSQMSIHFNVSRAHGWKDALVVGFLVTVLGAFVAQISSTGKHSPGSQPV
Ga0315292_116409771	3300032143	Sediment	MTTQTQNSIRFNVSKSHGWKDLFVIASLAIVLGAFVAQISSTPKHSSGSLPMAAVSATVSTNG
Ga0315283_102755043	3300032164	Sediment	MTTQNSLHFNVSKSHGWKDALVVSCLAIVLGAFVAQISSTPETTSGSRPMASVSATAAIN
Ga0315283_106040052	3300032164	Sediment	MTNPSQMSIHFNVSKAHGWKDALVVGFLVTVLGAFVAQISSTGKHSPGSQAVAAAATATLHG
Ga0315283_109379172	3300032164	Sediment	MTTQTRNSIHFNVSKSHGWKDLFVVASLAIVLGAFVAQISSTPKHSSGSLPMAAVSATVSRSG
Ga0315283_114666852	3300032164	Sediment	MTTQNSIHFNVSKSHGWKDAFVVSCLAIVLGAFVAQISSTPKSTSASQPMATVTETVAIH
Ga0315276_115107831	3300032177	Sediment	MTTQTQNSIRFNVSKSHGWKDLFVVASLAIVLGAFVAQISSTPKHSSGSLPTAAASATVSTNG
Ga0315271_104814041	3300032256	Sediment	MTTQTQKTLQFHVTKHGWKDLFVVSFLAIVLGAFVAQISSTPKHSSEPVPMASVSATAAVNG
Ga0315270_101953731	3300032275	Sediment	MTTQNSIHFNVSRSHGWKDALVVSCLAIVLGAFVAQISSTSKTASGSQPMASVSATVAID
Ga0315287_100681612	3300032397	Sediment	MTTQTRNSIHFNVSKSHGWKDLFVIASLAIVLGAFVAQISSTPKHSSGSLPMAAVSATVSTNG
Ga0315287_102203792	3300032397	Sediment	MTTQNSIRFNVSKSHGWKDAFVVSCLAIVLGAFVAQISSTPKSTSASQPMATVTETVAIH
Ga0315287_106502682	3300032397	Sediment	MTTQTQNSIRFNVSKSHGWKDLFVVASLAIVLGAFVAQISSTPKHSSDSLPMAAASATVSTNG
Ga0315287_113208122	3300032397	Sediment	MTTQNSIHFNVSKSHGWKDALVVTCLAIVLGAFVAQISSTPTTTSGSQPMASVSATVAIY
Ga0315287_125061681	3300032397	Sediment	MTTQTRKTIHFNVSKHGWKDLFVVTFLAIVLGAFVAQISSTPRHSSASQPVASAPLNATS
Ga0316604_100520742	3300033406	Soil	MTTQTRKTISFNVSKSHGWKDAFVVSCLAIVLGAFVAQISSTPRSAQRTIPVATASSTAASQG
Ga0316604_100520743	3300033406	Soil	MTTQNQNPTTLHFHVSKHGWKDLFVVSFLAIVLGSFVAQISSTPKHTSASQPMASAPLNATSNG
Ga0316604_107804291	3300033406	Soil	QTRKTISFNVSKSTSWRDAFVVSCLAIVLGAFVAQISSTPSRAQRTIPVATASSTVASQG
Ga0316605_102744711	3300033408	Soil	VSKSHGWKDAFVVSCLAIVLGAFVAQISSTPTHSRGSAPMASVSEVAATDG
Ga0316605_104514891	3300033408	Soil	QNPTTLHFHVSKHGWKDLFVVSFLAIVLGSFVAQISSTPKHTSASQPMASAPLNATSNG
Ga0316605_105953561	3300033408	Soil	VSKHGWKDLFVISFLVIVLGAFVAQISSTPKHTSAPPPMASVSATAATNG
Ga0316605_112419392	3300033408	Soil	MTTQTSKNLTFNVTKHGWKDAFVVSFLAIVLGAFVAQISSTPKGVSAPQPVAAATLNAASNG
Ga0316605_118299761	3300033408	Soil	QTQKTIHFNVSKSTGWKDAFVVTCLGIVLGAFVAQISSTPDHSRTAQPMASVSATAAVNG
Ga0316605_122837522	3300033408	Soil	MTTQNRKSISFNVSKSTGWKDAFVVSCLAIVLGAFVAQISTTPSRSQRSIPVATASSTAASQG
Ga0316603_107874583	3300033413	Soil	MTTQTQKSLHFNVSKHGWKDAFVVSFLAIVLGAFVAQISSTPKYTSGTQPMASVSATGTTSG
Ga0316603_109872132	3300033413	Soil	MTTQTRKTISFNVSKSTSWRDAFVVSCLAIVLGAFVAQISSTPSSAQRTIPVATASSTAASQG
Ga0316603_110159111	3300033413	Soil	MTTQNQNPTTLHFHVSKHGWKDLFVVSFLAIVLGSFVAQISSTPKHTSASQPMASAPL
Ga0316603_115281512	3300033413	Soil	MTTQTQKTIHFNISKSTGWKDAFVVTCLAIVLGAFVAQISSTPKHSRAEQPMASVSATAAVNG
Ga0316619_100653901	3300033414	Soil	ENAMTTRNQTTLHFNVSKHAWKDLFVVSFLAIVLGAFVAQISSTPKHSSASQPVASAPLNATSNG
Ga0316619_105692511	3300033414	Soil	IAMTTQTSKNLTFNVTKHGWKDAFVVSFLAIVLGAFVAQISSTPKGVSAPQPVAAATLNAASNG
Ga0316619_109210521	3300033414	Soil	MTTQTQKTIHFNVSKSTGWKDAFVVTCLAIVLGAFVAQISSTPKHSRAEQPMASVSATAAVNG
Ga0316622_1008848011	3300033416	Soil	ERGTEKAMTTQNQNPTTLHFHVSKHGWKDLFVVSFLAIVLGAFVAQISSSPKQSSASQPVASAPLNTTSNG
Ga0316625_1002933201	3300033418	Soil	NALHFNVTKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG
Ga0316625_1007453911	3300033418	Soil	MTTQNQKTLHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKHSSAPPPMASVSATAATNG
Ga0316625_1008883321	3300033418	Soil	MTTQTRQTLHFNVSKHAWKDLFVVSFLAIVLGAFVAQISSTPKHSSASQPVASAPLNATSNG
Ga0316625_1015396701	3300033418	Soil	KAMTTQNQNPTTLHFHVSKHGWKDLFVVSFLAIVLGSFVAQISSTPKHTSASQPMASAPLNATSNG
Ga0316625_1026591021	3300033418	Soil	ENVMTTQNQNPTTLHFHVSKHGWKDLFVVSFLAIVLGAFVAQISSSPKQSSASQPVASAPLNTTSNG
Ga0316601_1007103671	3300033419	Soil	ILRTDSNPERGTENAMTTQTQNALHFNVTKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG
Ga0316601_1009214291	3300033419	Soil	MTTQNQNPTTLHFHVSKHGWKDLFVVSFLAIVLGAFVAQISSSPKQSSASQPVASAPLNTTSNG
Ga0316613_100202711	3300033434	Soil	MTTQTRKTISFNVSKSHGWKDAFVVSCLAIVLGAFVAQISTTPSSAQRTIPVATASSTAASQG
Ga0316613_100202712	3300033434	Soil	MTTQSQNPTTLHFHVSKHGWKDLFVVSFLAIVLGAFVAQISSSPKQSSASQPVASAPLNTTSNG
Ga0316613_101922351	3300033434	Soil	ENAMTTQTQNALHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG
Ga0316613_104743032	3300033434	Soil	MTTQTQKTIRFNVSKSTGWRDAFVVSCLAIVLGAFVAQISSTPKHSSGSRPMAAVSTTVSQNG
Ga0316613_107888931	3300033434	Soil	TRQTLHFNVSKHAWKDLFVVSFLAIVLGAFVAQISSTPKHSSASQPVASAPLNATSNG
Ga0316600_103540371	3300033481	Soil	MTTQTRKTISFNVSKSTSWRDAFVVSCLAIVLGAFVAQISSTPSSAQRTIPVATANSTAASQG
Ga0316600_103665522	3300033481	Soil	TQSQNPTTLHFHVSKHGWKDLFVVSFLAIVLGAFVAQISSSPKQSSASQPVASAPLNATSNG
Ga0316600_109773831	3300033481	Soil	MTTRNQTTLHFNVSGHAWKDLFVVSFLAIVLGAFVAQISSTPKHSSASQPVASAPLNATSNG
Ga0316627_1018792561	3300033482	Soil	MTTRNQNSIRFNVSKSHGWNDLFVVASLAIVLGAFVAQITSTPKHSSGSLPMAAVSATVSQSG
Ga0316627_1019104071	3300033482	Soil	MTTQTQNALHFNVTKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG
Ga0316629_116094582	3300033483	Soil	EPENAMTTQTQKTISFNVSKSTSWRDAFVVSCLAIVLGAFVAQISSTPSSAQRTIPVATANSTAASQG
Ga0316626_116948341	3300033485	Soil	IHFTVSKSHGWKDAFVVSCLAIVLGAFVAQISSTPTHSRGSAPMASVSEVAATDG
Ga0316621_102696681	3300033488	Soil	MTTRTRNSIHFNVSKSHGWKDLFVVASLAIVLGAFVAQISSTPKHSSGSRPMAAVSTTVSQNG
Ga0316621_106681672	3300033488	Soil	MTTRNAIHFNVSKSTGWKDAFVVTCLAIVLGAFVAQISSVPTQAPRSIPVASASASAASQ
Ga0316621_115220612	3300033488	Soil	SIHFNVSKSHGWKDLFVVASLAIVLGAFVAQISSTPKHSSGSLPMAAVSATVSTNG
Ga0316621_115609961	3300033488	Soil	QTRKTISFNVSKSHGWKDAFVVSCLAIVLGAFVAQISSTPRSAQRTIPVATASTTAASQG
Ga0316628_1008289722	3300033513	Soil	MTTQDQKTLHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQPVASAPLNATSNG
Ga0316616_1000987732	3300033521	Soil	MTTQTRKTISFNVSKSHGWKDAFVVSCLAIVLGAFVAQISSTPRSAQRTIPVATASTTAASQG
Ga0316616_1002622802	3300033521	Soil	MTTRNQTTLHFNVSKHAWKDLFVVSFLAIVLGAFVAQISSTPKHSSASQPVASAPLNATSNG
Ga0316616_1008425182	3300033521	Soil	MTTQTQKTIHFNVSKSTGWKDALVVTCLAIVLGAFVAEISSTPKHSRAEQPMASASVTAIVNG
Ga0316616_1018476723	3300033521	Soil	LHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQTVASAPLNATSNG
Ga0316616_1022064041	3300033521	Soil	MTTRNQTTLHFHVSKHGWKDLFVVSFLAIVLGAFVAQISSSPQQSSASQPMASAPLNATSNG
Ga0316616_1030975371	3300033521	Soil	RRGTENAMTTQNQNPTTLHFHVTKHGWKDLFVVSFLAIVLGAFVAQISSTPKHSFASPPMASAPLNATSNG
Ga0316616_1044530412	3300033521	Soil	MTTQNQKTLHFNVSKHGWKDLAVISFLVIVLGAFVAQISSTPKHTSAPPPMASVSATAATNG
Ga0316617_1000278132	3300033557	Soil	MTTQTQNALHFNVSKHGWKDLFVVSFLAIVLGAFVAQISSTPKQSSASQTVASAPLNA
Ga0316617_1020135991	3300033557	Soil	RKTISFNVSKSHGWKDAFVVSCLAIVLGAFVAQISSTPRSAQRTIPVATASSTAASQG
Ga0316617_1026735522	3300033557	Soil	MTTQTRKTISFNVSKSTSWRDAFVVSCLAIVLGAFVAQISSTPSSAQRTIPVATANSTAASQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066898

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences