Metagenome Family F066747

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066747
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	115 residues
Representative Sequence	VSRGGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ
Number of Associated Samples	77
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	32.00 %
% of genes near scaffold ends (potentially truncated)	44.44 %
% of genes from short scaffolds (< 2000 bps)	68.25 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.238 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (39.682 % of family members)
Environment Ontology (ENVO)	Unclassified (45.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.270 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 31.72% Coil/Unstructured: 48.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF03239	FTR1	21.43
PF00149	Metallophos	15.87
PF12837	Fer4_6	11.90
PF13187	Fer4_9	3.97
PF12732	YtxH	3.97
PF12838	Fer4_7	3.97
PF01966	HD	3.17
PF02811	PHP	2.38
PF13649	Methyltransf_25	2.38
PF02583	Trns_repr_metal	1.59
PF00037	Fer4	1.59
PF04412	AcnX	0.79
PF10415	FumaraseC_C	0.79
PF01850	PIN	0.79
PF13548	DUF4126	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	1.59
COG1679	Mevalonate 5-phosphate dehydratase subunit 1, aconitase superfamily (modified mevalonate pathway)	Lipid transport and metabolism [I]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.03 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.03 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.24 %
Unclassified	root	N/A	3.97 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.08 %
Unclassified	root	N/A	3.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.56 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	9.52 %
Unclassified	root	N/A	3.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	34.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.14 %
Unclassified	root	N/A	3.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	34.92 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.56 %
Unclassified	root	N/A	3.97 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	34.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.56 %
Unclassified	root	N/A	3.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	34.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.56 %
Unclassified	root	N/A	3.97 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	34.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.56 %
Unclassified	root	N/A	3.97 %
Micromonospora carbonacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora carbonacea	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002066\|JGIcombinedJ21911_10025497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2133	Open in IMG/M
3300002068\|JGIcombinedJ21913_10078242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1327	Open in IMG/M
3300002071\|JGIcombinedJ21915_10121173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300002183\|JGI24145J26757_10064220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	832	Open in IMG/M
3300002515\|JGI24144J35610_10037356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300002538\|JGI24132J36420_10038100	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300002538\|JGI24132J36420_10071453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1017	Open in IMG/M
3300002549\|JGI24130J36418_10038742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1323	Open in IMG/M
3300002563\|JGI24138J36424_10103881	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300002564\|JGI24134J36421_10015837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2434	Open in IMG/M
3300002564\|JGI24134J36421_10116093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	623	Open in IMG/M
3300003858\|Ga0031656_10095060	All Organisms → cellular organisms → Archaea → Euryarchaeota	1095	Open in IMG/M
3300004282\|Ga0066599_100059169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1614	Open in IMG/M
3300004481\|Ga0069718_10063431	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300004481\|Ga0069718_10106435	All Organisms → cellular organisms → Bacteria	7120	Open in IMG/M
3300004775\|Ga0007798_10062693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300004776\|Ga0007800_10178528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	525	Open in IMG/M
3300005938\|Ga0066795_10028655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1613	Open in IMG/M
3300005938\|Ga0066795_10153490	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005947\|Ga0066794_10108713	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005947\|Ga0066794_10115971	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005980\|Ga0066798_10114216	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006055\|Ga0097691_1019535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2967	Open in IMG/M
3300006619\|Ga0075529_1022174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora carbonacea	564	Open in IMG/M
3300006636\|Ga0075525_10075120	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300006640\|Ga0075527_10033105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1378	Open in IMG/M
3300006864\|Ga0066797_1041277	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300006949\|Ga0075528_10078947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300006950\|Ga0075524_10155206	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300006972\|Ga0075518_1013642	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300011997\|Ga0120162_1027116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1671	Open in IMG/M
3300013427\|Ga0120106_1051062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	767	Open in IMG/M
3300020163\|Ga0194039_1095350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300020228\|Ga0194040_1087823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	907	Open in IMG/M
3300021070\|Ga0194056_10015340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3205	Open in IMG/M
3300021074\|Ga0194044_10405156	Not Available	508	Open in IMG/M
3300021075\|Ga0194063_10074626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1552	Open in IMG/M
3300021349\|Ga0194052_1125193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	900	Open in IMG/M
3300021473\|Ga0194043_1131666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300021473\|Ga0194043_1181026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	711	Open in IMG/M
3300022555\|Ga0212088_10002016	All Organisms → cellular organisms → Bacteria	43719	Open in IMG/M
3300025481\|Ga0208079_1019710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2055	Open in IMG/M
3300025484\|Ga0208587_1006821	All Organisms → cellular organisms → Bacteria	4733	Open in IMG/M
3300025533\|Ga0208584_1008987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2636	Open in IMG/M
3300025548\|Ga0208716_1024178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1437	Open in IMG/M
3300025553\|Ga0208080_1003835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6715	Open in IMG/M
3300025575\|Ga0209430_1005508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6523	Open in IMG/M
3300025582\|Ga0209386_1001381	All Organisms → cellular organisms → Bacteria	9648	Open in IMG/M
3300025725\|Ga0209638_1020189	All Organisms → cellular organisms → Bacteria	3186	Open in IMG/M
3300025750\|Ga0209747_1244968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	521	Open in IMG/M
3300025764\|Ga0209539_1050893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1781	Open in IMG/M
3300025764\|Ga0209539_1308547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300025829\|Ga0209484_10125273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300025829\|Ga0209484_10141145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	579	Open in IMG/M
3300025846\|Ga0209538_1072440	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300025857\|Ga0209014_10009145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5208	Open in IMG/M
3300025857\|Ga0209014_10129359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	950	Open in IMG/M
3300025864\|Ga0209429_10118201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1144	Open in IMG/M
3300025865\|Ga0209226_10094268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1363	Open in IMG/M
3300025865\|Ga0209226_10219541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	827	Open in IMG/M
3300025865\|Ga0209226_10259127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	743	Open in IMG/M
3300025888\|Ga0209540_10168749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1313	Open in IMG/M
3300025888\|Ga0209540_10235574	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300025891\|Ga0209585_10025105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	2169	Open in IMG/M
3300026223\|Ga0209840_1032545	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300026223\|Ga0209840_1068540	Not Available	781	Open in IMG/M
3300026271\|Ga0209880_1038267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1090	Open in IMG/M
3300027885\|Ga0209450_10003704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7784	Open in IMG/M
3300027897\|Ga0209254_10012258	All Organisms → cellular organisms → Bacteria → Proteobacteria	7888	Open in IMG/M
3300027897\|Ga0209254_10020549	All Organisms → cellular organisms → Bacteria	6017	Open in IMG/M
3300027897\|Ga0209254_10031808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4726	Open in IMG/M
3300027900\|Ga0209253_10208340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1557	Open in IMG/M
3300027902\|Ga0209048_10001943	All Organisms → cellular organisms → Bacteria	20836	Open in IMG/M
(restricted) 3300028581\|Ga0247840_10015782	All Organisms → cellular organisms → Bacteria	8366	Open in IMG/M
(restricted) 3300029268\|Ga0247842_10002652	All Organisms → cellular organisms → Bacteria	25944	Open in IMG/M
(restricted) 3300029286\|Ga0247841_10324541	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300031746\|Ga0315293_10005623	All Organisms → cellular organisms → Bacteria	11794	Open in IMG/M
3300031834\|Ga0315290_10020601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5107	Open in IMG/M
3300031834\|Ga0315290_10095102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2503	Open in IMG/M
3300031834\|Ga0315290_10095809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2494	Open in IMG/M
3300031834\|Ga0315290_10143962	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300031834\|Ga0315290_10178818	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300031834\|Ga0315290_10431030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1154	Open in IMG/M
3300031834\|Ga0315290_10468493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1101	Open in IMG/M
3300031834\|Ga0315290_11524180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	542	Open in IMG/M
3300031873\|Ga0315297_10179392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1735	Open in IMG/M
3300031873\|Ga0315297_10344597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1246	Open in IMG/M
3300031997\|Ga0315278_10221127	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300032143\|Ga0315292_10052762	All Organisms → cellular organisms → Bacteria	3019	Open in IMG/M
3300032143\|Ga0315292_10123171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2053	Open in IMG/M
3300032143\|Ga0315292_10220936	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300032143\|Ga0315292_10296176	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300032143\|Ga0315292_10818736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	779	Open in IMG/M
3300032143\|Ga0315292_10878473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	748	Open in IMG/M
3300032143\|Ga0315292_11247015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	610	Open in IMG/M
3300032156\|Ga0315295_10200292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300032156\|Ga0315295_10214746	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300032164\|Ga0315283_10617982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1172	Open in IMG/M
3300032164\|Ga0315283_10749093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1049	Open in IMG/M
3300032164\|Ga0315283_11259355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	769	Open in IMG/M
3300032164\|Ga0315283_11692246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	640	Open in IMG/M
3300032173\|Ga0315268_11536909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	678	Open in IMG/M
3300032177\|Ga0315276_10209562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2048	Open in IMG/M
3300032177\|Ga0315276_10745667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1049	Open in IMG/M
3300032177\|Ga0315276_11424015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300032177\|Ga0315276_12004508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	590	Open in IMG/M
3300032177\|Ga0315276_12173063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	562	Open in IMG/M
3300032256\|Ga0315271_10031614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3713	Open in IMG/M
3300032256\|Ga0315271_10565960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	969	Open in IMG/M
3300032275\|Ga0315270_10035206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2767	Open in IMG/M
3300032275\|Ga0315270_11097453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	529	Open in IMG/M
3300032342\|Ga0315286_10172940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2314	Open in IMG/M
3300032342\|Ga0315286_10572771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1167	Open in IMG/M
3300032342\|Ga0315286_10712029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1024	Open in IMG/M
3300032397\|Ga0315287_10190609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2388	Open in IMG/M
3300032397\|Ga0315287_11536270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	751	Open in IMG/M
3300032401\|Ga0315275_10767882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1069	Open in IMG/M
3300032401\|Ga0315275_11678698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	677	Open in IMG/M
3300032401\|Ga0315275_11870614	Not Available	635	Open in IMG/M
3300032401\|Ga0315275_12452660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300032516\|Ga0315273_10048137	All Organisms → cellular organisms → Bacteria	5752	Open in IMG/M
3300032516\|Ga0315273_10083857	All Organisms → cellular organisms → Bacteria	4337	Open in IMG/M
3300032516\|Ga0315273_10120438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3592	Open in IMG/M
3300032516\|Ga0315273_10269688	Not Available	2315	Open in IMG/M
3300032516\|Ga0315273_10726329	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.73%
Terrestrial	Environmental → Terrestrial	41.27%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	58.73%
Soil	Environmental → Terrestrial → Soil	41.27%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	49.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.13%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Pond	Environmental → Aquatic → Freshwater → Pond	0.79%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	39.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	34.13%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	9.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.14%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.59%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.79%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	39.68%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	32.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	7.14%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	6.35%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	5.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.59%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.59%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002066	Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)	Environmental	Open in IMG/M
3300002068	Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002071	Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002183	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A	Environmental	Open in IMG/M
3300002515	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002563	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004775	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17M	Environmental	Open in IMG/M
3300004776	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006619	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-4B	Environmental	Open in IMG/M
3300006636	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300006972	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB136-A	Environmental	Open in IMG/M
3300011997	Permafrost microbial communities from Nunavut, Canada - A15_80cm_18M	Environmental	Open in IMG/M
3300013427	Permafrost microbial communities from Nunavut, Canada - A15_35cm_18M	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300020228	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-10m	Environmental	Open in IMG/M
3300021070	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-13m	Environmental	Open in IMG/M
3300021074	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-17m	Environmental	Open in IMG/M
3300021075	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20m	Environmental	Open in IMG/M
3300021349	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-6m	Environmental	Open in IMG/M
3300021473	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-15m	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025575	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33A (SPAdes)	Environmental	Open in IMG/M
3300025582	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028581 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17m	Environmental	Open in IMG/M
3300029268 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19m	Environmental	Open in IMG/M
3300029286 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18m	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ21911_100254973	3300002066	Arctic Peat Soil	GGRLCRSVDVSCGGRRRRAVAGLAAAILLLVVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
JGIcombinedJ21913_100782423	3300002068	Arctic Peat Soil	GLAAAIVLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ*
JGIcombinedJ21915_101211732	3300002071	Arctic Peat Soil	PCRSVDVSCGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARLPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
JGI24145J26757_100642202	3300002183	Arctic Peat Soil	DVSCGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWVPTTARRIEITKDGEQYRLFYGAARLPYQATRERDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
JGI24144J35610_100373562	3300002515	Arctic Peat Soil	RRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWVPTTARRIEITKDGEQYRLFYGAARLPYQATRERDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
JGI24132J36420_100381003	3300002538	Arctic Peat Soil	VSRGGRRRRAVAGLAAAILLLVVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
JGI24132J36420_100714532	3300002538	Arctic Peat Soil	RPCRSVGVSRGGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ*
JGI24130J36418_100387422	3300002549	Arctic Peat Soil	RGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
JGI24138J36424_101038811	3300002563	Arctic Peat Soil	VSRGGRRRRAVAGLAAAILLLXVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
JGI24134J36421_100158375	3300002564	Arctic Peat Soil	VSRGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAE
JGI24134J36421_101160931	3300002564	Arctic Peat Soil	CGGRLCRSVDVSRGGRRRRAVAGLAAAILLLVVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
Ga0031656_100950602	3300003858	Freshwater Lake Sediment	VPRGGRRACGGRPRPRVRVSRAGLGRGVVAVLSVALVLLAVVLPLAACGSEDDPFDGLWWEPATGRRIEITKEGEQYRLLYGAAERPYRATREGDELRVRQPFGGDIVVKAAAEGRLELVIGEKTSRLVRVPQHQ*
Ga0066599_1000591693	3300004282	Freshwater	VAVLSVALVLLAVVLPLAACGSEDDPFDGLWWEPATGRRIEITKEGEQYRLLYGAAERPYRATREGDELRVRQPFGGDIVVKAAAEGRLELVIGEKTSRLVRVPQHQ*
Ga0069718_100634312	3300004481	Sediment	VSRGGHGRRAVALAAATLVVLAIALPLAACGAGDDPFTGLWWEPTTARRIEITKDGDQYRLLYGAALRPYQATREGDELLIRQPIGGDIVVKTAAEGRLEMVIDGKSSRLVRVPQHQ*
Ga0069718_1010643511	3300004481	Sediment	VSRGGRARGAVAGLAAALLLLAAALALASCGSGDDPFTGLWWEPATARRIEITKDGDQYRLLYGAARRPYQATREGDELRVRQPIGGDIVVKTAAEGRLTMVIDGKTSRLVRVPQHQ*
Ga0007798_100626931	3300004775	Freshwater	VSRAAGRRRSVVAGLGAAILLLAVALPLVACGAKTDPFTGLWWEPTTGRRIEITKDGGQYRLLYGAARRPYQATREGDELRIRQPIGDDIVVKAAADGRL
Ga0007800_101785281	3300004776	Freshwater	VSRAAGRRRSVVAGLGAAILLLAVALPLVACGAKTDPFTGLWWEPTTGRRIEITKDGGQYRLLYGAARRPYQATREGDELRIRQPIGDDIVVKAAADGRLNMVIGGKTSRLVRVPQHQ*
Ga0066795_100286552	3300005938	Soil	VSRGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ*
Ga0066795_101534901	3300005938	Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLV
Ga0066794_101087131	3300005947	Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGG
Ga0066794_101159711	3300005947	Soil	VSRGGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGG
Ga0066798_101142162	3300005980	Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVQQHQ*
Ga0097691_10195352	3300006055	Arctic Peat Soil	VSCGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWVPTTARRIEITKDGEQYRLFYGAARLPYQATRERDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ*
Ga0075529_10221741	3300006619	Arctic Peat Soil	LPARDRRVPRGGRRACGGRLCRSVDVSRGGRRRRAVAGLAAAILLLAVALPLAACGSGHDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ*
Ga0075525_100751202	3300006636	Arctic Peat Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ*
Ga0075527_100331051	3300006640	Arctic Peat Soil	GRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ*
Ga0066797_10412772	3300006864	Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ*
Ga0075528_100789472	3300006949	Arctic Peat Soil	VSRGGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ*
Ga0075524_101552062	3300006950	Arctic Peat Soil	VSRGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGADIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ*
Ga0075518_10136421	3300006972	Arctic Peat Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGHDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVRAAAEGRLDMVIGGKTSRLVHVPQHQ*
Ga0120162_10271163	3300011997	Permafrost	GPCRGVGVSRTGRGRSVGAVLAAAILLVAVALPLSACGAGDDPFTGLWWEPATGRRIEITKDGGQYSLLYGAARRPYQATREGDQLRVRQPFGGDIVVTTAADGSLRMVSDGKSSRLERVPQHQ*
Ga0120106_10510621	3300013427	Permafrost	VSRTGRGRSVGAVLAAAILLVAVALPLSACGAGDDPFTGLWWEPATGRRIEITKDGGQYSLLYGAARRPYQATREGDQLRVRQPFGGDIVVTTAADGSLRMVSDGKSSRLERVPQHQ*
Ga0194039_10953502	3300020163	Anoxic Zone Freshwater	VSRGGRAQRAVAVLAVTLVLLAVALPVAACGAGDDPFTGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATREGDELRVRQPIGGDIVVKTAADGRLDMVGDGQTSRLVRVPQHQ
Ga0194040_10878232	3300020228	Anoxic Zone Freshwater	VSGRGRRAVAGLAAALMLLGAALPLAACGAGDDPFTGLWWEPATGRRIEITKDGDQYRLLYGAALRPYQAARVRDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ
Ga0194056_100153405	3300021070	Anoxic Zone Freshwater	VSRGGRGRRAGVGRGGRGRCAVALLALTLALLGVVLPLAACGVEDDPFTGLWWEPTTGRRIEITKDGDQYRLLYGAARRPYQATREGEELRVRQPIGGDIVVKTAADGRLDMVGDGQTSRLVRVPQHQ
Ga0194044_104051561	3300021074	Anoxic Zone Freshwater	AGLAVAIAFLAAALPLAACGAADDPFTGLWWEPTTARRIEITKDGDQYHLLYGAARRPYQARREGEELRVRQPIGGDIVLKAAAEGRLSMVSGGQTSRLARVPQHQ
Ga0194063_100746261	3300021075	Anoxic Zone Freshwater	LAAALMLLGAALPLAACGAGDDPFTGLWWEPATGRRIEITKDGDQYRLLYGAALRPYQAARVRDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ
Ga0194052_11251932	3300021349	Anoxic Zone Freshwater	RRWSTGVSRAAGRRRSVVAGLGAAILLLAVALPLVACGAKTDPFTGLWWEPTTGRRIEITKDGGQYRLLYGAARRPYQATREGDELRIRQPIGDDIVVKAAADGRLNMVIGGKTSRLVRVPQHQ
Ga0194043_11316662	3300021473	Anoxic Zone Freshwater	VSQSSRGRTVVAVVAMLLILLAGALPLAACGTRDDPFTGLWWEPASGRRIEITKDGGRYSFLYGAARRPYQAAREGDALRIRQPIGDDIVVTLAADGHLD
Ga0194043_11810261	3300021473	Anoxic Zone Freshwater	VSGRGRRAVAALAAALMLLGAALPLAACGAGDDPFTGLWWEPATGRRIEITKDGDQYRLLYGAALRPYQAARVRDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ
Ga0212088_1000201627	3300022555	Freshwater Lake Hypolimnion	VSRAAGRRRSVVAGLGAAILLLAVALPLVACGAKTDPFTGLWWEPTTGRRIEITKDGGQYRLLYGAARRPYQATREGDELRIRQPIGDDIVVKAAADGRLNMVIGGKTSRLVRVPQHQ
Ga0208079_10197102	3300025481	Arctic Peat Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGHDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0208587_10068216	3300025484	Arctic Peat Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0208584_10089872	3300025533	Arctic Peat Soil	VSCGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARLPYQATRERDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0208716_10241781	3300025548	Arctic Peat Soil	VSCGGRRRRAVAGLAAAILLLAVALPLAACGSKDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARLPYQATRERDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRL
Ga0208080_10038356	3300025553	Arctic Peat Soil	VSCGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWVPTTARRIEITKDGEQYRLFYGAARLPYQATRERDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0209430_10055084	3300025575	Arctic Peat Soil	VSRGGRRRRAVAGLAAAILLLVVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0209386_10013812	3300025582	Arctic Peat Soil	VRRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ
Ga0209638_10201895	3300025725	Arctic Peat Soil	RAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0209747_12449681	3300025750	Arctic Peat Soil	RPCRSVGVSRSGHGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ
Ga0209539_10508932	3300025764	Arctic Peat Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ
Ga0209539_13085472	3300025764	Arctic Peat Soil	VSRGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGERYRLLYGAARRPYQATREGDQLRIRQPIGGGDIVVKAAADGRLNMVIGGKT
Ga0209484_101252732	3300025829	Arctic Peat Soil	VSRGGRRRRAVAGLAAAILLLVVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTS
Ga0209484_101411451	3300025829	Arctic Peat Soil	VSRGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ
Ga0209538_10724402	3300025846	Arctic Peat Soil	VSRGGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ
Ga0209014_100091456	3300025857	Arctic Peat Soil	VSRWGRARTVCAALAATIVMLAVALPLAACGANDDPFTGLWWEPTTARRIEITRDGRQYRLLYGAAKRPYPAVRDGDELRIRQPIGGAIVVTTAAGGSLKMVIGGKASRLVRVPQHQ
Ga0209014_101293592	3300025857	Arctic Peat Soil	VSRGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0209429_101182012	3300025864	Arctic Peat Soil	VSRGGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGADIVVKAAAEGRLDMVIGGKTSRLVRVPQHQ
Ga0209226_100942681	3300025865	Arctic Peat Soil	RACGRLCRSVDVSCGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWVPTTARRIEITKDGEQYRLFYGAARLPYQATRERDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0209226_102195411	3300025865	Arctic Peat Soil	RPRWSAGVSRGGRRRRAVAGLAAAILLLAVALPLAACGSKDDPFTGLWWEPTTARRIEITKDGGHYRLLYGAAQRPYQATREGDELRIRQPIGGDIVVKVAADGGLDMVIGGKASRLVRVPQHQ
Ga0209226_102591272	3300025865	Arctic Peat Soil	KRLSSGGRRRAVAGIAAAILLLALALPLAACGARDDPFVGLWWEPTTGRRIEITKDGEQYRLFYGAARRPYQATRAGDELRIRQPIGGDIVVKTASEGHLQMVIGGTSSRLVRVPQHQ
Ga0209540_101687492	3300025888	Arctic Peat Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGHDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ
Ga0209540_102355742	3300025888	Arctic Peat Soil	VSRGGRRRRAVAGLAAAILLLAVALPLAACGSKDDPFTGLWWEPTTARRIEITKDGGHYRLLYGAAQRPYQATREGDELRIRQPIGGDIVVKVAADGGLDMVIGGKASRLVRVPQHQ
Ga0209585_100251051	3300025891	Arctic Peat Soil	RSVDVSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQH
Ga0209840_10325452	3300026223	Soil	VSRDGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWEPTTARRIEITKDGAQYRLFYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGKTSRLVHVPQHQ
Ga0209840_10685402	3300026223	Soil	VSRGGRGRRAVAGLAAAIVLLAVALPLAACGAGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGR
Ga0209880_10382671	3300026271	Soil	DVSCGGRRRRAVAGLAAAILLLAVALPLAACGSGDDPFTGLWWVPTTARRIEITKDGEQYRLFYGAARLPYQATRERDELRIRQPIGGDIVVKAAAEGRLNMVIGGKTSRLVRVPQHQ
Ga0209450_100037049	3300027885	Freshwater Lake Sediment	RRGRGRRAVALAAATLVVLAAALPLAACGAGDDPFAGLWWEPATARRIEITKDGDQYRLLYGAALRPYQATRQGDELLIRQPIGGDIVVKTAADGRLEMIIDGESSRLVRVPQHQ
Ga0209254_100122589	3300027897	Freshwater Lake Sediment	ALAAATLVVLAIALPLAACGAGDDPFTGLWWEPATARRIEITKDGEQYQLLYGAALRPYQATREGDELRVRQPFGGDIVVKTAAEGRLEMVIDGKSSRLVRVPQHQ
Ga0209254_1002054910	3300027897	Freshwater Lake Sediment	VSRGGRGRRAVAGLAAALLLLAAALALASCGSGDDPFTGLWWEPATARRIEITKDGDQYRLLYGAARRPYQATREGDELRVRQPIGGDIVVKTAAEGRLTMVIDGKSSRLVRVPQHQ
Ga0209254_100318088	3300027897	Freshwater Lake Sediment	VSRAGLGRGVVAVLSVALVLLAVVLPLAACGSEDDPFDGLWWEPATGRRIEITKEGEQYRLLYGAAERPYRATREGDELRVRQPFGGDIVVKAAAEGRLELVIGEKTSRLVRVP
Ga0209253_102083403	3300027900	Freshwater Lake Sediment	VSRGGRARGAVAGLAAALLLLAAALALASCGSGDDPFTGLWWEPATARRIEITKDGDQYRLLYGAARRPYQATREGDELRVRQPIGGDIVVKTAAEGRLTMVIDGKSSRLVRVPQHQ
Ga0209048_1000194313	3300027902	Freshwater Lake Sediment	VSRGGRRRRAVAGLAAAILLLAAALPLAACGVGNDPFTGLWWEPATGRRIEITKVGEQYRLFYGAARRPYEATREGDELRIRQPIGGDIVVQAAAEGRLDMVIGGKTSRLVRVPQHQ
(restricted) Ga0247840_100157821	3300028581	Freshwater	VRRRGRGRRAVAGLAAAILLLAAALPLAACGVGDDPFTGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATREGDELRVRQPIGGDIVLKAAAEGRLDMVSGGQTSRLVRVPQHQ
(restricted) Ga0247842_100026523	3300029268	Freshwater	VSRRGRGRRAVAGLAAAILLLAAALPLAACGVGDDPFTGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATREGDELRVRQPIGGDIVLKAAAEGRLDMVSGGQTSRLVRVPQHQ
(restricted) Ga0247841_103245412	3300029286	Freshwater	VSRGGLGRSVFAGLAAAILILAVVLPLAACGAGGDPFTGLWWEPTTGRRIGITNDGDQYRLLYGAALRPYLATRAGDELRVRQPMGGEIVLRVAAEGRLDMVISGQTSRLVRVPQHQ
Ga0315293_100056235	3300031746	Sediment	VSRGGRGRRAVAGLAAAILLLAAALPLVACGFGDDPFTGLWWEPTTARRIEITKDGEQCRLLYGAARRPYQATRERDELRIRQPIGGDIVVKAAAEGRLDMVIGGQTSRLVRVPQHQ
Ga0315290_100206013	3300031834	Sediment	VSHAGLGRSVFAGLAVALVLLAVILPLAACGSGDDPFTGVWWEPTTGRRIEITKEGEQYRLLYGAAQRPYRATREGDELRVRQPFGGDIVVKAAAEGRLVMVIGGQSSRLVRVPQHQ
Ga0315290_100951022	3300031834	Sediment	VSRGGRGRRAVAVLATTLVLMVVALPLAACGSADDPFTGLWWEPTTGRRIEITKDGAQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKTAAEGRLDMVSGGKSSRLVRVPQHQ
Ga0315290_100958094	3300031834	Sediment	VSRGGRRRSAVAGLAAAILLLTSVLPLAACGAGDDPFAGLWWEPTTGRRIEITKEGEQYRLLYGAARRPYQATRVGDELRIRQPIGGDIVLKVAAEGRLQMVSGGKSSRLVRVPQHQ
Ga0315290_101439622	3300031834	Sediment	VSRGGRRRGAFAGLAAAILLLVIVLPLAACGTKDDPFAGLWWEPTTGRRIEITKEGGQYRLLYGAARRPYQATRKGDELRIRQPIGGDIVLKVAAEGRLEMVSGGRTSRLMRVPQHQ
Ga0315290_101788182	3300031834	Sediment	VSRCGRGRRAVAGLAAAILLLAVALPLAACGAGDDPFAGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGAELRIRQPIGGDIVVRAAAEGRLDMVIGGQTSRLVRVPQHQ
Ga0315290_104310302	3300031834	Sediment	VSHRGRGRRAVAGLAAAILLLAAALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGQTSRLLRVPQHQ
Ga0315290_104684932	3300031834	Sediment	VSRGGRGRRAVAVLATTLVLMAVALPLAACGSADDPFTGLWWEPTTGRRIEITKDGAQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKTAAEGRLDMVSG
Ga0315290_115241802	3300031834	Sediment	VSLVLLAVVLSLAACGSGDDPFAGLWWEPAAGRRIEITKEGEQYRLLYGAAERPYRATREGDELRVRQPFGGDIVVKAAAEGRLDMVIGGQTSRLVRVP
Ga0315280_103312981	3300031862	Sediment	VLPLAACGTKDDPFAGLWWEPTTGRRIEITKEGGQYRLLYGAARRPYQATREGDELRIRQPIGGDIVLKVAAEGRLEMVSGGRTSRLMRVPQHQ
Ga0315297_101793923	3300031873	Sediment	AIVGLAAAILLLAAALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGQTSRLLRVPQHQ
Ga0315297_103445972	3300031873	Sediment	VSRCGRGRRAVVGLAAAILLLAVALPLAACGAGDDPFAGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATREGAELRIRQPIGGDIVVRAAAEGRLDMVIGGQTSRLVRVPQHQ
Ga0315278_102211272	3300031997	Sediment	VSRGGRGRRAVAVLATTLVLMAVALPLAACGSADDPFTGLWWEPTTGRRIEITKDGAQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKTAAEGRLDMVSGGKSSRLVRVPQHQ
Ga0315292_100527625	3300032143	Sediment	VSHRGRGRTVFAILAVSLVLLAVVLPLAACGSGDDPFAGLWWEPAAGRRIEITKEGEQYRLLYGAAERPYRATREGDELRVRQPFGGDIVVKAAAEGRLDMVIGGQTSRLVRVP
Ga0315292_101231712	3300032143	Sediment	VSRRGRGRRAVALAAATLVVLAIGLPLVACGAGDDPFTGLWWEPATARRIEITKDGDQYRLLYGAALRPYPATREGDELLIRQPMGGDIVVKTAADGRLEMIIDGESSRLVRVPQHQ
Ga0315292_102209362	3300032143	Sediment	VGLAAAILLLAVALPLAACGAGDDPFAGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATREGAELRIRQPIGGDIVVRAAAEGRLDMVIGGQTSRLVRVPQHQ
Ga0315292_102961762	3300032143	Sediment	VRPGGRGRRAAAGLAAAILLLAVALPLAACGAGDDPFIGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATREGEELRVRQPIGGDIVVKPAAEGRLNMVIGGKTTRLVRVPQHQ
Ga0315292_108187362	3300032143	Sediment	VSRGGRGRRAVAVLATTLVLMVVALPLAACGSADDPFTGLWWEPTTGRRIEITKDGAQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKTAAEGRLDMVSGGKS
Ga0315292_108784732	3300032143	Sediment	VSHRGRGRRAIVGLAAAILLLAAALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAVRRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGQTSRLLRVPQHQ
Ga0315292_112470152	3300032143	Sediment	VSRGGRRRRAVAGLAAAIMLLTSVLPLVACGAGDDPFAGLWWEPTTGRRIEITKEDGQYRLLYGAARRPYQATRVGDELRIRQPIGGDIVVKVAAEGSLKMISGGKSSRLVRVPQHQ
Ga0315295_102002923	3300032156	Sediment	VSHAGLGRSVFAGLAVALVLLAVILPLAACGSGDDPFTGVWWEPATGRRIEITKEGEQYRLLYGAAKRPYRATREGDELRVRQPFGGDIVVKAAAEGRLVMVIGGQSSRLVRVPQHQ
Ga0315295_102147462	3300032156	Sediment	VGLAAAILLLAVALPLAACGAGDDPFAGLWWEPTTARRIEITKDGEQCRLLYGAARRPYQATRERDELRIRQPIGGDIVVKAAAEGRLDMVIGGQTSRLVRVPQHQ
Ga0315283_106179821	3300032164	Sediment	GLAAAILLLAVALPLAACGAGDDPFAGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATREGAELRIRQPIGGDIVVRAAAEGRLDMVIGGQTSRLVRVPQHQ
Ga0315283_107490932	3300032164	Sediment	VSRGGRRRGAFAGLAAAILLLVIVLPLAACGTKDDPFAGLWWEPTTGRRIEITKEGGQYRLLYGAARRPYQATREGDELRIRQPIGGDIVLKVAAEGRLEMVSGGRTSRLMRVPQHQ
Ga0315283_112593552	3300032164	Sediment	SRGGRRLRAVAVLAVSLVLLAVVLPLAACGSGDDPFAGLWWEPTTGRRIEITKDGEQYRLLYGAAQRPYKATREGDELRVRQPFGGDIVVKVAPEGRLVLVIGGQSSRLVRVPQHQ
Ga0315283_116922462	3300032164	Sediment	FAILAVSLVLLAVVLSLAACGSGDDPFAGLWWEPAAGRRIEITKEGEQYRLLYGAAERPYRATREGDELRVRQPFGGDIVVKAAAEGRLDMVIGGQTSRLVRVP
Ga0315268_115369092	3300032173	Sediment	VIHRGRGRRAVAGLAAAILLLTSVLPLAACGAGDDPFAGLWWEPTTGRRIEITKEGEQYRLLYGAARRPYQATRVGDELRIRQPIGGDIVLKVAAEGRLQMVSGGKSSRLVRVPQHQ
Ga0315276_102095623	3300032177	Sediment	VRPGGRGRRAAAGLAAAILLLAVALPLAACGAGDDPFIGLWWEPTTARRIEITKDGDQYRLLYGAGRRPYQATRKGDELRVRQPIGGDVVVKAAAEGRLDMVIGGKTTRLVRVPQHQ
Ga0315276_107456672	3300032177	Sediment	GRRAVAGLAAAILLLAAALPLAACGAGDDPFTGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATRERDELRIRQPIGGDIVVKAAAGGRLDMVIGGQTSRLVRVPQHQ
Ga0315276_114240151	3300032177	Sediment	VSHRGRGRRAIVGLAAAILLLAAALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAVRRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGQT
Ga0315276_120045082	3300032177	Sediment	VSRGGRGRRAVAVLAATLVLMVVALPLAACGSADDPFTGLWWEPTTGRRIEITKDGAQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKTAAEGRLDMVSGGKSSRLVRVPQHQ
Ga0315276_121730631	3300032177	Sediment	PRRGVGVSHRGGGRTAVAGLAAAILLLAIVLPLAACGAGDDPFAGLWWEPTTARRIEITKDGDQYRLLYGAARRPYRATREGDELRISQPIGGDIVVKAAAEGRLDMVIGGQTSRLVRVPQHQ
Ga0315271_100316144	3300032256	Sediment	VSRSGRRLRAVAALATALVLLAVVLPLVACGSADDPFVGLWWEPTTARRIEITKDGERYRLLYGAARRPYQAVREGDELRVRQPFGGDIVLKAAGEGRLGMVIGGQSSRLVRVPQHQ
Ga0315271_105659601	3300032256	Sediment	VPGGGRRACGGRPGRSVDVSHAGLGRSVFAGLAVALVLLAVILPLAACGSGDDPFTGVWWEPTTGRRIEITKEGEQYRLLYGAAQRPYRATREGDELRVRQPFGGDIVVKAAAEGRLVMVIGGQSSRLVRVPQHQ
Ga0315270_100352061	3300032275	Sediment	GRSADVSRSGRRLRAVAALATALVLLAVVLPLVACGSADDPFVGLWWEPTTARRIEITKDGERYRLLYGAARRPYQAVREGDELRVRQPFGGDIVLKAAGEGRLGMVIGGQSSRLVRVPQHQ
Ga0315270_110974531	3300032275	Sediment	RSLAVSHGGRRQRAVAVLAVSLLLLTVVLPLAACGSGDDPFTGVWWEPTTGRRIEITKEGGQYRLLYGAARRPYQATRKGDELRIRQPIGGDIVLKVAAEGRLEMVSGGRTSRLMRVPQH
Ga0315286_101729404	3300032342	Sediment	VSRCGRGRRAVAGLAAAILLLAVALPLAACGAGDDPFAGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGAELRVRQPIGGDIVVKAAAEGRLDMVIGGQ
Ga0315286_105727711	3300032342	Sediment	RVPCAGRRACGGRLCRSVGVSRGGRGRRAVAVLATTLVLMVVALPLAACGSADDPFTGLWWEPTTGRRIEITKDGAQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKTAAEGRLDMVSGGKSSRLVRVPQHQ
Ga0315286_107120291	3300032342	Sediment	RCGRGRRAVAGLAAAILLLAVALPLAACGAGDDPFAGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGAELRIRQPIGGDIVVRAAAEGRLDMVIGGQTSRLVRVPQHQ
Ga0315287_101906093	3300032397	Sediment	VSRGGRRLRAVAVLAVSLVLLAVVLPLAACGSGDDPFAGLWWEPTTGRRIEITKDGEQYRLLYGAAQRPYKATREGDELRVRQPFGGDIVVKVAPEGRLVLVIGGQSSRLVRVPQHQ
Ga0315287_115362701	3300032397	Sediment	VSRCGRGRRAVAGLAAAILLLAVALSLAACGAGDDPFAGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVRAAAEGRLDMVIGGKASRLVRVP
Ga0315275_107678822	3300032401	Sediment	VSHRGRGRRAVAGLAAAILLLAAALPLAACGCGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGQTSRLLRVPQHQ
Ga0315275_116786981	3300032401	Sediment	GRGRRAVAGLAAAILLLAAALPLAACGAGDDPFTGLWWEPTTARRIEITKDGDQYRLLYGAARRPYQATRERDELRIRQPIGGDIVVKAAAGGRLDMVIGGQTSRLVRVPQHQ
Ga0315275_118706141	3300032401	Sediment	VSRGGRGRRAVAGLAAAILLLAAALPLVACGFGDDPFTGLWWEPTTARRIEITKDGEQCRLLYGAARRPYQATRERDELRIRQPIGGDIVVKAAAEGRLDM
Ga0315275_124526602	3300032401	Sediment	VSHRGRGRRAIVGLAAAILLLAAALPLAACGSGDDPFTGLWWEPTTARRIEITKDGEQYRLLYGAVRRPYQATREGDELRIRQPIGGDIVVKAAAEGRLDMVIGGQTS
Ga0315273_100481373	3300032516	Sediment	VSHAGLGRSIFAGLAVALVLLAVILPLAACGSGDDPFTGVWWEPTTGRRIEITKEGEQYRLLYGAAQRPYRATREGDELRVRQPFGGDIVVKAAAEGRLVMVIGGQSSRLVRVPQHQ
Ga0315273_100838572	3300032516	Sediment	VSHGGCRRRAVAGLVAAILLLAVALPLAACGAGDDPFIGLWWEPTTARRIEITKDGDQYRLLYGAGRRPYQATRKGDELRVRQPIGGDVVVKATAEGRLNMVIGGKTTRLVRVPQHQ
Ga0315273_101204386	3300032516	Sediment	VSRGGRGRRAVAVLATTLVLMAVALPLAACGSADDPFTGLWWEPTTGRRIEITKDGAQYRLLYGAARRPYQATREGDELRIRQPIGGDIVVKTAAEGRLDMVSGGKS
Ga0315273_102696883	3300032516	Sediment	VSRGGRGRGAFAGLAAAILLLVIVLPLAACGTKDDPFAGLWWEPTTGRRIEITKEGGQYRLLYGAARRPYQATREGDELRIRQPIGGDIVLKVAAEGRLEMVSGGRTSRLMRVPQHQ
Ga0315273_107263292	3300032516	Sediment	VSRGGRRRSAVAGLAAAILLLTSVLPLAACGAGDDPFAGLWWEPTTGRRIEITKEGEQYRLLYGAARRPYQATRVGDELRIRQPIGGAIVLKVAAEGRLQMVSGGKSSRLVRVPQHQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters