Metagenome / Metatranscriptome Family F066706

Basic Information
Family ID	F066706
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	57 residues
Representative Sequence	FSVKMISKDNYMIQLPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD
Number of Associated Samples	107
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.59 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Unclassified (98.413 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.698 % of family members)
Environment Ontology (ENVO)	Unclassified (46.825 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.730 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 14.10% Coil/Unstructured: 85.90%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13568	OMP_b-brl_2	64.29
PF00076	RRM_1	8.73
PF00791	ZU5	1.59
PF05635	23S_rRNA_IVP	1.59
PF04461	DUF520	1.59
PF03938	OmpH	0.79
PF13620	CarboxypepD_reg	0.79
PF00196	GerE	0.79
PF14905	OMP_b-brl_3	0.79
PF01435	Peptidase_M48	0.79
PF12389	Peptidase_M73	0.79
PF01741	MscL	0.79
PF02518	HATPase_c	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	1.59
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2825	Periplasmic chaperone for outer membrane proteins, Skp family	Cell wall/membrane/envelope biogenesis [M]	0.79

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
All Organisms	root	All Organisms	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
cellular organisms	root	All Organisms → cellular organisms	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
Terrimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.41 %
Terrimonas ferruginea	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	0.79 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005335\|Ga0070666_10025982	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	3822	Open in IMG/M
3300012212\|Ga0150985_103370316	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2033	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.59%
Environmental	Environmental	47.62%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.59%
Terrestrial	Environmental → Terrestrial	35.71%
Aquatic	Environmental → Aquatic	11.90%
Wastewater	Engineered → Wastewater	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	32.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.81%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Peat	Environmental → Terrestrial → Peat	3.17%
Sediment	Environmental → Aquatic → Sediment	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.56%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.97%
Ice	Environmental → Aquatic → Freshwater → Ice	3.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.17%
Lake	Environmental → Aquatic → Freshwater → Lake	2.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.97%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	3.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.59%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.97%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.17%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	3.17%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.59%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090003	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN	Host-Associated	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300029983	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_1	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034159	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_0210_18	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJN_02457660	2088090003	Quercus Rhizosphere	DQSKGKLISFSVKMISKDNYQVQLPEQLEAGEYGFVWVKNMELKEFTVFAFGVDWKNSD
F14TC_1006635492	3300000559	Soil	LILLPEQLEAGEYGFVWVKNMELKELNVFAFGIDWKSSD*
F14TC_1011062182	3300000559	Soil	MTRTAIKYVLLGLIVMPLSVKPISKDNYRIEFDEPLDAGEYGFIWVKNMDMKEFSVYAFAIDWKNSN*
Ga0031656_100245341	3300003858	Freshwater Lake Sediment	LNDKEAGKGRLISISIKMLSKDNYLIQLPEQIEAGEYGFVWLKNMDLKEFNVFGFGIDWKNSD*
Ga0031656_101495831	3300003858	Freshwater Lake Sediment	LNDKEAGKGRLISISIKMLSKDNYLIQLPEQIEAGEYGFVWLKNMDLKEFNVFGFGIDWKNSDQ*
Ga0062590_1004656743	3300004157	Soil	SKDNYMILLPEQLEAGEYGFVWVKNMELKELNVFAFGIDWKRSD*
Ga0062595_1016220441	3300004479	Soil	SKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0066673_102290001	3300005175	Soil	VTTVTSKEGLLNSSEEEKGRQISFTLKQISNDNYMIQFTNPLEAGEYGFVWVKNMELKGFTVFAFGIDWKSSD*
Ga0070676_102941001	3300005328	Miscanthus Rhizosphere	NAKDGLLNDKDDARGKLINFSVKMISPDNYMIQLPDQLDAGEYGFVWVKNMELKEFVVFAFGIDWKSID*
Ga0070676_104172071	3300005328	Miscanthus Rhizosphere	NNKEDEKGKLITMSVKPISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0068869_1016282341	3300005334	Miscanthus Rhizosphere	DNYMVQLPDQLDAGEYGFVWVKNMELKEFVVYAFGIDWKSID*
Ga0068869_1016564701	3300005334	Miscanthus Rhizosphere	KAGKMISLSVKLISKDVYTIQSAEPLEAGEYGFVWVKNMELKEFSVFGFGIDWKNSD*
Ga0070666_100259827	3300005335	Switchgrass Rhizosphere	SVKPISKDNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN*
Ga0070666_105621922	3300005335	Switchgrass Rhizosphere	ISKDNYRIEFTQPLEAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0070661_1003698683	3300005344	Corn Rhizosphere	VKPISKDNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN*
Ga0070669_1013679402	3300005353	Switchgrass Rhizosphere	DQKREVTVTTKEGLLNNKEDEKGKLITMSVKPISKDNYRIEFAEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0070659_1011535752	3300005366	Corn Rhizosphere	DNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN*
Ga0070679_1007426292	3300005530	Corn Rhizosphere	TVTTKEGLLNDKEDEKGKLITMSVKPISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0070672_1001558801	3300005543	Miscanthus Rhizosphere	FAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKSSD*
Ga0070672_1018851131	3300005543	Miscanthus Rhizosphere	RGKLINFSVKMISPDNYMIQLPDQLDAGEYGFVWVKNMELKEFVVYAFGIDWKSID*
Ga0070665_1002545614	3300005548	Switchgrass Rhizosphere	VTVTTKEGLLNDKDDEKGKLITMSVKPISKDNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN*
Ga0068855_1018367852	3300005563	Corn Rhizosphere	TMSVKPISKDNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN*
Ga0066705_101242592	3300005569	Soil	MIQFTNPLEAGEYGFVWVKNMELKEFTVFAFGIDWKSSD*
Ga0068856_1020757872	3300005614	Corn Rhizosphere	TTKEGLLNDKDDEKGKLITMSVKPISKDNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN*
Ga0068852_1000646451	3300005616	Corn Rhizosphere	EPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0068859_1001336921	3300005617	Switchgrass Rhizosphere	LLNDKDDEKGKLITMSVKPISKDNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN*
Ga0068864_1009352271	3300005618	Switchgrass Rhizosphere	VTTKEGLLNDKEDEKGKSIGMSVKPISKDNYRIEFTQPLEAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0068866_101410723	3300005718	Miscanthus Rhizosphere	INSKDGMLNDKEEGKGRLITFSVKTISKDNYMILLPEQLEAGEYGFVWVKNMELKELNVFAFGIDWKSSD*
Ga0068866_103890983	3300005718	Miscanthus Rhizosphere	ANVLEAGEYGFVWLKNMDLKECNVFAFGVDWKSSD*
Ga0068861_1005160681	3300005719	Switchgrass Rhizosphere	KDEAKGKLMSFSVKMISKDIYQVQLPEQLEAGEYGFVWVKNMELKEFSVFAFGIDWKTSN
Ga0068851_109577431	3300005834	Corn Rhizosphere	LNDKENQKGKSISFSVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKNSD*
Ga0068870_112946372	3300005840	Miscanthus Rhizosphere	EVTINAKDGLLNDKDDARGKLINFSVKMISPDNYMIQLPDQLDAGEYGFVWVKNMELKEFVVYAFGIDWKSID*
Ga0075521_102543841	3300006642	Arctic Peat Soil	KEGVFNDKEDQKGKLISMSVKPVSKDTYIIQFSENLEAGEYGFVWVKNMELKEFSVFAFGIDWKNSN*
Ga0075434_1013325652	3300006871	Populus Rhizosphere	IEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0075429_1014419461	3300006880	Populus Rhizosphere	EAKGKQISFSIKQISKDNYMILFSEALEAGEYGFVWVKNMELKEFTVFAFGIDWKSSD*
Ga0075424_1015288832	3300006904	Populus Rhizosphere	ISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0111538_133406481	3300009156	Populus Rhizosphere	EVTVTTKEGLLNDKEDEKGKSIGMSVKPISKDNYRIEFTQPLEAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0105242_116580032	3300009176	Miscanthus Rhizosphere	RFSVKMISKDNYQIQLPDQLEAGEYGFVWVKNMELKEFTVFAFGIDWKSSD*
Ga0134109_104227761	3300010320	Grasslands Soil	TLKQISNDNYMIQFTNPLEAGEYGFVWVKNMELKGFTVFAFGIDWKSSD*
Ga0126370_124873072	3300010358	Tropical Forest Soil	GDPLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSN*
Ga0105239_117540822	3300010375	Corn Rhizosphere	SKDNYRIEFTQPLEAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0134122_102452853	3300010400	Terrestrial Soil	ITMSVKPISKDNYRIEFNEPLDAGEYGFIWVKNMDMKEFSVFAFGIDWKNSN*
Ga0134122_108582691	3300010400	Terrestrial Soil	KLVNFSVKTISKDNYMILLPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD*
Ga0136638_101640832	3300012094	Polar Desert Sand	VKMISKDNYMIQFTQNLEAGEYGFVWVKNMEQKEFTVFGFGIDWKSSD*
Ga0150985_1033703165	3300012212	Avena Fatua Rhizosphere	PISKDNYRIEFNEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0150985_1060648092	3300012212	Avena Fatua Rhizosphere	LNDKEDEKGKLITMSVKPISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0150984_1205990661	3300012469	Avena Fatua Rhizosphere	KPISKDNYRIEFNEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0136640_100748782	3300012531	Polar Desert Sand	MISKDNYMIQFTQTLEAGEYGFVWVKNMEQKEFGVFAFGIDWKSSD*
Ga0136612_105517211	3300012680	Polar Desert Sand	IAFNVKMISKDNYMIEFAQTLEAGEYGFVWVKNMEQKEFTVFAFGIDWKSSD*
Ga0136613_105079242	3300012681	Polar Desert Sand	MISKDNYMIQFTQNLEAGEYGFVWVKNMEQKEFTVFAFGIDWKSS
Ga0154020_109113272	3300012956	Active Sludge	QIQLPEQLAAGEYGFVWVKNMELKEFTVFAFGIDWKSSD*
Ga0164303_106436612	3300012957	Soil	MSVKPISKDNYRIELNEPLEAGEYGFIWVKNMELKEFSVFAFGIDWKNSN*
Ga0164299_107214212	3300012958	Soil	NQKGKSISFSVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKSSD*
Ga0164309_111955021	3300012984	Soil	MLNDKDDQKGKSISFSVKEISPNNYMIQFPESLEAGEYGFVWLKNMDLKECSVFAFGIDWKNSD*
Ga0164304_107372281	3300012986	Soil	SVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKSSD*
Ga0157374_118236211	3300013296	Miscanthus Rhizosphere	NQKGKSISFSVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKNSD*
Ga0157378_111489242	3300013297	Miscanthus Rhizosphere	NFSVKSVSKDNYMIQLPGQFDAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD*
Ga0157372_131044291	3300013307	Corn Rhizosphere	EDEKGKLITMSVKPISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0163163_117622641	3300014325	Switchgrass Rhizosphere	TVTTKEGLLNNKEDEKGKLITMSVKPISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN*
Ga0157379_106212951	3300014968	Switchgrass Rhizosphere	ALTFNTPLDAGEYGFVWMNNTTLQEFPVYGFGIDWKKSD*
Ga0157376_121809851	3300014969	Miscanthus Rhizosphere	EGLLNDKDDEKGKLITMSVKPISKDNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN*
Ga0157376_127450961	3300014969	Miscanthus Rhizosphere	KGKLVTMSVKPISKDNYRIELNEPLEAGEYGFIWVKNMELKEFSVFAFGIDWKNSN*
Ga0132258_133405311	3300015371	Arabidopsis Rhizosphere	IPLSVKMISKDNYMIQFAENLEAGEYGFVWVKNMELKEFTVHAFAIDWKNSD*
Ga0132257_1000840167	3300015373	Arabidopsis Rhizosphere	KREVTVTTKEGLLNDKDDEKGKMIGISVKPVSKDNYRIEFAEKLEAGEYGFVWVKNMDLKEYSVFAFGIDWKSSD*
Ga0132255_1005890373	3300015374	Arabidopsis Rhizosphere	KEGLLNDKDDEKGKMIGISVKPVSKDNYRIEFAEKLEAGEYGFVWVKNMDLKEYSVFAFGIDWKSSD*
Ga0132255_1046700101	3300015374	Arabidopsis Rhizosphere	KREVNIASKEGLITDKDEEKGKLVDFSVKMISKDNYMIQFANILEAGEYGFVWMKNMDLKEFNVFAFGIDWKASD*
Ga0163161_109781231	3300017792	Switchgrass Rhizosphere	KREVTITSKEGVLNDKEEAKGKQISFNIKQISKDNYMINFADALEAGEYGFVWVKNMELKEFNVFAFGIDWKKSD
Ga0187825_100619591	3300017930	Freshwater Sediment	EKGKQISFSVKSISPDNYMIQFSDPLEAGEFGFVWVKNMDLKEFTVFAFGIDWKSSN
Ga0187776_111656071	3300017966	Tropical Peatland	NEEEKGGQVSFSVKPISGDNYMIQFASTLEAGEYGFVWVKNMELKEFTVYAFGIDWKSSN
Ga0184618_102899502	3300018071	Groundwater Sediment	AKEGVLNDKEDQKGKLINISVKQISKDNYMIQFAEALEAGEYGFVWVKNMEQKEFSVSAFGIDWKNSD
Ga0190272_108740352	3300018429	Soil	EVTITSKEGVLNDKDDTRGKLMSFSVKMISKDNYQIQLPEQLEAGEYGFVWVKNMELKEFTVFAFGIDWKSSD
Ga0190270_100487512	3300018469	Soil	INDKEDQKGKSISFSVKLISPDNYMVQFSNALEAGEYGFVWLKNMDLKECNVFAFGIDWKNSD
Ga0190274_100834931	3300018476	Soil	QKREVTITSKEGVLNDKEEAKGKQISFSIKQISKETYMIHFAEALEAGEYGFIWVKNMELKEFNVFAFGIDWKNSD
Ga0190274_129290481	3300018476	Soil	GVLNNKDEAKGRLINFSVKMISKDNYQIQLPDQLAAGEYGFVWVKNMELKEFTVFAFGIDWKSSD
Ga0190271_117493201	3300018481	Soil	ISKDNYMINFADALEAGEYGFVWVKNMELKEFNVFAFGIDWKKSD
Ga0190271_128954182	3300018481	Soil	SKDGMLNDKEEGKGKLVNFSVKPISKDNYMILLPEQLEAGEYGFVWVKNMELKEFTVFAFGVDWKSSD
Ga0190273_111971041	3300018920	Soil	KDNYMIQLPEQLEAGEYGFVWVKNMELKEFVVYAFGIDWKNSD
Ga0193692_10678232	3300020000	Soil	ANGKLMGFSVKMISTDNYMIQLPEQLEAGEFGFVWVKNMELKEFNVFAFGIDWKSSD
Ga0193696_11248921	3300020016	Soil	TINAKDGLLNDKDDARGKLINFSVKMISPDNYMIQLPDQLDAGEYGFVWVKNMELKEFVVYAFGIDWKSID
Ga0193752_12347572	3300020027	Soil	EGLLNNKEEAKGKLMNFSVKMISKDNYMIQLHEQLEAGEYGFVWVKNMELKEFTVFAFGIDWKSSD
Ga0212091_103348291	3300022549	Groundwater	KEGVLNDKEEAKGKQISFNIKQISKDNYMINFADALEAGEYGFVWVKNMELKEFNVFAFGIDWKKSD
Ga0207656_103278712	3300025321	Corn Rhizosphere	RIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN
Ga0207656_105534312	3300025321	Corn Rhizosphere	QKGKSISFSVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKNSD
Ga0207688_102416341	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	PDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKNSD
Ga0207645_101280313	3300025907	Miscanthus Rhizosphere	NAKDGLLNDKDDARGKLINFSVKMISPDNYMIQLPDQLDAGEYGFVWVKNMELKEFVVFAFGIDWKSID
Ga0207645_109649361	3300025907	Miscanthus Rhizosphere	INFSVKMISPDNYMVQLPDQLDAGEYGFVWVKNMELKEFVVYAFGIDWKSID
Ga0207659_102291244	3300025926	Miscanthus Rhizosphere	KENQKGKSISFSVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKNSD
Ga0207701_106538582	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TFNNPLEAGEYGFVWMNNMTLQEFPVYAFGIDWKRAD
Ga0207690_109703851	3300025932	Corn Rhizosphere	DNYRIEFNGPLDAGEYGFVWVKNMDLKEFSVYAFGIDWKNSN
Ga0207706_115690461	3300025933	Corn Rhizosphere	FTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN
Ga0207686_109172982	3300025934	Miscanthus Rhizosphere	NDKDDTRGKLINFSVKMISPDNYMVQLPDQLDAGEYGFVWVKNMELKEFTVFAFGIDWKSSD
Ga0207669_100303023	3300025937	Miscanthus Rhizosphere	ERREVNISTKEGMLNDKEDQKGKNISFSVKMISPDNYMVQFANVLEAGEYGFVWLKNMDLKECNVFAFGVDWKSSD
Ga0207665_108229682	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MVSPDNYLIQFSQQLNAGEYGFVWVKNMELKEFSVFTFGIDWRNSN
Ga0207691_114351522	3300025940	Miscanthus Rhizosphere	FSVKMISPDNYMIQLPDQLDAGEYGFVWVKNMELKEFVVYAFGIDWKSID
Ga0207689_104357851	3300025942	Miscanthus Rhizosphere	ARGKLINFSVKMISRDNYMVQLPDQLDAGEYGFVWVKNMELKEFVVYAFGIDWKSID
Ga0207679_110688291	3300025945	Corn Rhizosphere	MLNDKENQKGKSISFSVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKNSD
Ga0207640_105067161	3300025981	Corn Rhizosphere	PDDQKREVTVTTKEGLLNNKEDEKGKLITMSVKPISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN
Ga0207708_116125552	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GKGKLVNFSVKTISKDNYMILLPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD
Ga0207641_113203092	3300026088	Switchgrass Rhizosphere	SISFSVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKSSD
Ga0207676_105078713	3300026095	Switchgrass Rhizosphere	DEKREVNISTKEGMLNDKENQKGKSISFSVKMISPDNYMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKNSD
Ga0207675_1010838541	3300026118	Switchgrass Rhizosphere	MISPDNDMIQFAEQLEAGEYGFVWVKNMELKECNVYAFGIDWKSSD
Ga0207698_112617792	3300026142	Corn Rhizosphere	PISKDNYRIEFTQPLEAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN
Ga0257159_10339771	3300026494	Soil	REVTVTTKEGLLNDKEDEKGKLITMSVKPISKDNYRIEFNGPLDAGEYGFIWVKNMDMKEFSVFAFGIDWKNSN
Ga0209971_10413963	3300027682	Arabidopsis Thaliana Rhizosphere	MILLPEQLEAGEYGFVWVKNMELKELNVFAFGIDWKSSD
Ga0209023_100365831	3300027870	Freshwater And Sediment	SKEGVLNNKDEAKGKLMSFSVKMISPDNYQIQLPEQLEAGEYGFVWVKNMELKEFTVFAFGIDWKSSD
Ga0209254_106257402	3300027897	Freshwater Lake Sediment	NDKEAGKGRLISISIKMLSKDNYLIQLPEQIEAGEYGFVWLKNMDLKEFNVFGFGIDWKNSDQ
Ga0209254_106281262	3300027897	Freshwater Lake Sediment	NDKEAGKGRLISISIKMLSKDNYLIQLPEQIEAGEYGFVWLKNMDLKEFNVFGFGIDWKNSD
Ga0302284_11085052	3300029983	Fen	LPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD
Ga0311332_102236093	3300029984	Fen	FSVKMISKDNYMIQLPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD
Ga0311350_114584182	3300030002	Fen	TDKDGAKGKLMSFSVKMISKDNYMIQLPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD
Ga0311333_116000422	3300030114	Fen	KDGAKGKLMSFSVKMISKDNYMIQLPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD
Ga0073995_121988702	3300031047	Soil	RQVTINAKEGLLNDKEEGKGKLINFGVKMISKDNYMIQLPDQLEAGEYGFVWVKNMELKEFTVFAFGIDWKSSD
Ga0307468_1010324862	3300031740	Hardwood Forest Soil	KDNYRIELNEPLEAGEYGFIWVKNMELKEFSVFAFGIDWKNSN
Ga0307468_1016049751	3300031740	Hardwood Forest Soil	KREVTITSKEGVLNDKEEAKGKQISFNIKQISKDNYMINFAEALEAGEYGFVWVKNMELKEFNVFAFGIDWKKSD
Ga0307468_1017079522	3300031740	Hardwood Forest Soil	DQKREVTVTTKEGLLNNKEDEKGKLITMSVKPISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN
Ga0315290_113732092	3300031834	Sediment	MIPKDNYLLQLPEQLEAGEYGFVRVKNMELKEFTVFAFGIDWKSSD
Ga0310904_107070892	3300031854	Soil	DKEEGKGKLVNFSVKTISKDNYMILLPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSS
Ga0310884_103586012	3300031944	Soil	NYMILLPEQLEAGEYGFVWVKNMDLKEFTVFAFGIDWKSSD
Ga0307414_112885331	3300032004	Rhizosphere	KEEEKGKQISFSVKLLSKDNYIIQLPEQLEAGEYGFVWMKNMELKEFSVFAFAIDWKNSD
Ga0307415_1016923671	3300032126	Rhizosphere	KEDQKGKLIGFSVKMISKDNYMIQIPEQLQAGEYGFVWMKNMELKEFSVHAFAIDWKTSD
Ga0315283_100763762	3300032164	Sediment	LFKIIIMRSSVKMIPKDNYLLQLPEQLEAGEYGFVRVKNMELKEFTVFAFGIDWKSSD
Ga0315287_108881641	3300032397	Sediment	DKEAAKGKLISISIKMLSKDNYLIQLPEQIEAGEYGFVWVKNMDLKEFNVFGFGIDWKNSDQ
Ga0310810_105346172	3300033412	Soil	MISEDNFMIQLRKSGAGEYSFVWVKNMEQKGFTVFAFDIDWKSSD
Ga0310810_107501042	3300033412	Soil	TTKEGLLNDKEDEKGKLITMSVKPISKDNYRIEFTEPLDAGEYGFIWVKNMDLKEFSVFAFGIDWKNSN
Ga0370489_0189166_283_402	3300034127	Untreated Peat Soil	VQLPEQLEAGEYGLVWIKNMDLKEFVVFAFGIDWQKATN
Ga0370509_0252561_463_603	3300034159	Untreated Peat Soil	MLSKDNYQVQLPEQLEAGEYGFVWVKNMELKEFTVFAFGIDWRNSD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066706

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign