Metagenome / Metatranscriptome Family F066400

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066400
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	74 residues
Representative Sequence	MSTGVRVFAGVLIRRAVAAQRDSTRLARPEMHPIGTDLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV
Number of Associated Samples	112
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.52 %
% of genes near scaffold ends (potentially truncated)	43.65 %
% of genes from short scaffolds (< 2000 bps)	89.68 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.413 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (26.984 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.063 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.62% β-sheet: 0.00% Coil/Unstructured: 38.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF07992	Pyr_redox_2	36.51
PF02574	S-methyl_trans	4.76
PF00248	Aldo_ket_red	2.38
PF00111	Fer2	0.79
PF03625	DUF302	0.79
PF00070	Pyr_redox	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	4.76
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	4.76
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	77.78 %
Unclassified	root	N/A	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	77.78 %
Unclassified	root	N/A	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	64.29 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.17 %
Unclassified	root	N/A	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.29 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.17 %
Unclassified	root	N/A	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.29 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3.17 %
Unclassified	root	N/A	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.29 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.38 %
Unclassified	root	N/A	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.29 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2.38 %
Unclassified	root	N/A	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001141\|JGI12638J13249_103280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300002126\|JGI24035J26624_1023995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300004479\|Ga0062595_102705462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	500	Open in IMG/M
3300005093\|Ga0062594_100761628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	887	Open in IMG/M
3300005184\|Ga0066671_10549310	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005294\|Ga0065705_10602571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300005327\|Ga0070658_10450699	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005332\|Ga0066388_101051231	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300005337\|Ga0070682_101753201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300005356\|Ga0070674_101706139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	570	Open in IMG/M
3300005444\|Ga0070694_101857255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	514	Open in IMG/M
3300005451\|Ga0066681_10451523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300005457\|Ga0070662_101135878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300005457\|Ga0070662_101912016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	513	Open in IMG/M
3300005458\|Ga0070681_10036600	All Organisms → cellular organisms → Bacteria	4928	Open in IMG/M
3300005518\|Ga0070699_100880359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300005526\|Ga0073909_10531156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300005535\|Ga0070684_100714489	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005536\|Ga0070697_101014774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300005563\|Ga0068855_101717543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300005564\|Ga0070664_100674250	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300005576\|Ga0066708_10238209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1153	Open in IMG/M
3300005576\|Ga0066708_10436505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300005578\|Ga0068854_100381004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1162	Open in IMG/M
3300005598\|Ga0066706_10739975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300005616\|Ga0068852_100687259	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300005618\|Ga0068864_101840547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	611	Open in IMG/M
3300005713\|Ga0066905_100628187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	913	Open in IMG/M
3300005764\|Ga0066903_104331732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300005844\|Ga0068862_100695815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	984	Open in IMG/M
3300005937\|Ga0081455_10147334	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300005937\|Ga0081455_10841363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	574	Open in IMG/M
3300006032\|Ga0066696_10700224	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006034\|Ga0066656_10406298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300009100\|Ga0075418_10419694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1432	Open in IMG/M
3300009137\|Ga0066709_102250171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300009156\|Ga0111538_12360035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300009792\|Ga0126374_10850435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300010335\|Ga0134063_10476475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	622	Open in IMG/M
3300010361\|Ga0126378_11406404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	790	Open in IMG/M
3300010362\|Ga0126377_10099350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2651	Open in IMG/M
3300010362\|Ga0126377_12421573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	601	Open in IMG/M
3300010364\|Ga0134066_10084113	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300010366\|Ga0126379_10550463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1233	Open in IMG/M
3300010366\|Ga0126379_12266562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300010373\|Ga0134128_12758542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	541	Open in IMG/M
3300010376\|Ga0126381_102274251	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300010376\|Ga0126381_104675917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300010398\|Ga0126383_10256933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1718	Open in IMG/M
3300012198\|Ga0137364_10579226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300012199\|Ga0137383_10773959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	701	Open in IMG/M
3300012349\|Ga0137387_10623283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300012354\|Ga0137366_10731454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300012685\|Ga0137397_10325448	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1146	Open in IMG/M
3300012898\|Ga0157293_10077884	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012917\|Ga0137395_10825269	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012917\|Ga0137395_11152742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	546	Open in IMG/M
3300012922\|Ga0137394_11589241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	511	Open in IMG/M
3300012948\|Ga0126375_10476939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	924	Open in IMG/M
3300012961\|Ga0164302_10936585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300013296\|Ga0157374_11020345	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300013297\|Ga0157378_10252552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1689	Open in IMG/M
3300014157\|Ga0134078_10062124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1320	Open in IMG/M
3300014325\|Ga0163163_10213365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1979	Open in IMG/M
3300015371\|Ga0132258_12131804	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300015372\|Ga0132256_100493965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1334	Open in IMG/M
3300015372\|Ga0132256_100824898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1044	Open in IMG/M
3300015373\|Ga0132257_100854721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1138	Open in IMG/M
3300015374\|Ga0132255_100799224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1406	Open in IMG/M
3300015374\|Ga0132255_102819651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300015374\|Ga0132255_104898234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300016371\|Ga0182034_10549042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	969	Open in IMG/M
3300016371\|Ga0182034_11776129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300016404\|Ga0182037_10444640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1077	Open in IMG/M
3300017792\|Ga0163161_11664018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300018051\|Ga0184620_10049833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1174	Open in IMG/M
3300018072\|Ga0184635_10080027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1281	Open in IMG/M
3300018072\|Ga0184635_10296211	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300018081\|Ga0184625_10358058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300019361\|Ga0173482_10029173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1650	Open in IMG/M
3300019869\|Ga0193705_1077314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300019877\|Ga0193722_1008121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2656	Open in IMG/M
3300019883\|Ga0193725_1068828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300019886\|Ga0193727_1007844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4232	Open in IMG/M
3300019886\|Ga0193727_1148475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	640	Open in IMG/M
3300021080\|Ga0210382_10450430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300021413\|Ga0193750_1017632	All Organisms → cellular organisms → Bacteria → Proteobacteria	1740	Open in IMG/M
3300021418\|Ga0193695_1052861	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300021560\|Ga0126371_12137696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300022534\|Ga0224452_1136150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300022756\|Ga0222622_10012212	All Organisms → cellular organisms → Bacteria	4123	Open in IMG/M
3300025290\|Ga0207673_1029817	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	753	Open in IMG/M
3300025930\|Ga0207701_10540166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	996	Open in IMG/M
3300025930\|Ga0207701_10632646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	909	Open in IMG/M
3300025933\|Ga0207706_11319836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300025945\|Ga0207679_10105580	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300026118\|Ga0207675_100051581	All Organisms → cellular organisms → Bacteria	3838	Open in IMG/M
3300026304\|Ga0209240_1239001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300026316\|Ga0209155_1071850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1306	Open in IMG/M
3300026330\|Ga0209473_1264514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300026530\|Ga0209807_1077420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1479	Open in IMG/M
3300028708\|Ga0307295_10078090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	877	Open in IMG/M
3300028768\|Ga0307280_10288806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300028790\|Ga0307283_10182874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300028799\|Ga0307284_10077373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1215	Open in IMG/M
3300028814\|Ga0307302_10591008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300028885\|Ga0307304_10430703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300030993\|Ga0308190_1047244	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300031231\|Ga0170824_107786150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300031446\|Ga0170820_11072950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300031469\|Ga0170819_10029918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	541	Open in IMG/M
3300031538\|Ga0310888_10198758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1101	Open in IMG/M
3300031668\|Ga0318542_10595178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300031719\|Ga0306917_11119196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300031847\|Ga0310907_10681538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300031890\|Ga0306925_10193007	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300031910\|Ga0306923_10378086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1614	Open in IMG/M
3300031942\|Ga0310916_10573620	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300031954\|Ga0306926_10916948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1048	Open in IMG/M
3300032001\|Ga0306922_10113902	All Organisms → cellular organisms → Bacteria	2872	Open in IMG/M
3300032205\|Ga0307472_100012931	All Organisms → cellular organisms → Bacteria	4269	Open in IMG/M
3300032261\|Ga0306920_100197405	All Organisms → cellular organisms → Bacteria	3003	Open in IMG/M
3300033289\|Ga0310914_11217601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300033475\|Ga0310811_10681387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1001	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.40%
Host-Associated	Host-Associated	24.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.84%
Plants	Host-Associated → Plants	24.60%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.32%
Sediment	Environmental → Aquatic → Sediment	4.76%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.52%
Loam	Environmental → Terrestrial → Soil → Loam	8.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.59%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001141	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12638J13249_1032802	3300001141	Forest Soil	MLTGVRVFAGVLIRRAVAAQRDSTRLARPQVNPIAANLHAFFAFAPMRLLDRLNRNRIQVRTASGTHDRLA*
JGI24035J26624_10239952	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTRLARPQMHPVGTDLYAFFAFAAIRLLDGLNVNRIQM
Ga0062595_1027054621	3300004479	Soil	AGVLIRRAVAAQRDSTRLARPQMHPVGTDLYAFFAFAAIRLLDGLNVNRIQMRTASRTHGRLVR*
Ga0062594_1007616281	3300005093	Soil	MFAGVPIRRAIAAKGDSTRLARPQMDPVATNLYALFAFTAMRLLDRLNRDRIQMRTALGIHDRLADDVVF
Ga0066671_105493101	3300005184	Soil	RVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNNGDRIQMRTPSGTHDRLV*
Ga0065705_106025711	3300005294	Switchgrass Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTRLARPEMYPIGTDFYAFFAFAPMRLLDRLNRNRIQMRTPLGTHDRLV*
Ga0070658_104506992	3300005327	Corn Rhizosphere	STGVRVFAGVLIRRAVAAQRDSTRLARPQMHPVGTDLYAFFAFAAIRLLDGLNVNRIQMRTASRTHGRLVR*
Ga0066388_1010512312	3300005332	Tropical Forest Soil	MLTGVRVFAGVLIRRAVAAQRDSTRLARSQVNPVAANLHAFFAFASMRLFDRLNRNRIQVRTASGTHDRLA*
Ga0070682_1017532011	3300005337	Corn Rhizosphere	MTTSMSMFAGVPIRRAIAAKGDSTRLARPQMDPVATNLYALFAFTAMRLLDRLNRDRIQMRTASITHNRLV*
Ga0070674_1017061391	3300005356	Miscanthus Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDATRLARPEMHPIGTDLYAFFAFATMRLLDRLNRDRIQMRTASITHNRLV*
Ga0070694_1018572551	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	IRRAVAAQRDSTRLARPEMHPIGTDLYAFFAFATMRMLNRSNRDRIQMGTASRTHDRLV*
Ga0066681_104515232	3300005451	Soil	MFARLRRCDYRMSTGIRVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNGDRIQMRTTFGIHDRLV*
Ga0070662_1011358782	3300005457	Corn Rhizosphere	MSMFAGVPIRRAIAAKGDSTRLARPQMDPVATNLYALFAFTAMRLLDRLNRDRIQMRTALGIHDRLADDVVFADALRRDARRI*
Ga0070662_1019120162	3300005457	Corn Rhizosphere	DHRMSTGVRVFAGVLIRRAVAAKRHSTCLACSQMNPVAADLNAFFAFTALRLLDYFNRIQMRTASINHDLFAVAMFGLLTRRVGR*
Ga0070681_100366004	3300005458	Corn Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTRLARPQMHPVGTDLYAFFAFAAIRLLDGLNVNRIQMRTASRTHGRLVR*
Ga0070699_1008803591	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLTGVRVFAGVLIRRAVAAQRDSTCLARPQMHPVAADLNAFFAFAAMRLFDRFNRIQMSAASGTHD*
Ga0073909_105311562	3300005526	Surface Soil	MLARLRRCDDRMSTGVCVFAGVLIRRAVAAKRDSTSLARPQMNPIAADLYAFFAFATMRLFDRLNLNRIQMRTPSGTHD
Ga0070684_1007144891	3300005535	Corn Rhizosphere	RMFAGVPIGRTVAAKGDSTCLACPQMYPIGTDLYALFTFTALRLLDRINRNRIQMRTTLSIHDRLA*
Ga0070697_1010147741	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLTGVRVFAGVLIRRAVAAQRDSTCLARPQMHPVAADLNAFFAFAAMRLFDRFNRIQM
Ga0068855_1017175431	3300005563	Corn Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTRLARPQMHPVGTDLYAFFAFAAIRLLDGLNVNRIQMRT
Ga0070664_1006742501	3300005564	Corn Rhizosphere	RVFAGVLIRRAVAAQRDSTRLARPEMHPIGADLYAFFAFATLRLLDRVSLDRVQMRTTLEVHD*
Ga0066705_106193161	3300005569	Soil	RAVAAQRDSTCLARPEMDPIRTDLYAFFAFAAMRLLDRLNRDRIQMRTASRTHDRLV*
Ga0066708_102382093	3300005576	Soil	MFARLRRCDYRMSTGIRVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRFNGDRIQMRTSSGIHDRLVG*
Ga0066708_104365051	3300005576	Soil	MLAWLCRRDYRMSTGVCMFCGVAIRRTIAAQRDSTRLARPQMNPVAADLHTFFAFAALWPFDRLDRVQMRAASDT
Ga0068854_1003810041	3300005578	Corn Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTRLARPEMHPIRTDLYAFFALAAMRLLDRLNHDRIQMRTTLGIHDRLV*
Ga0066706_107399752	3300005598	Soil	MFARLRRCDYRMSTGMRVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNNGDRIQMRTPSGTHDRLV*
Ga0068852_1006872591	3300005616	Corn Rhizosphere	RVFAGVLIRRAVAAQRDSTRLARPQMHPVGTDLYAFFAFAAIRLLDGLNVNRIQMRTASRTHGRLVR*
Ga0068864_1018405471	3300005618	Switchgrass Rhizosphere	GMRMFAGVPIGRTVAAKGDSTCLACPQMYPIGTDLYALFTFTALRLLDRINRNRIQMRTTLSIHDRLA*
Ga0066905_1006281872	3300005713	Tropical Forest Soil	MSTCVRVFAGMLIGGAVAAQRDSTLLARPEMHPIGTDLYAFFAFAALRLLNRLDRDRLQMSTTSDIHDRLP*
Ga0066903_1043317321	3300005764	Tropical Forest Soil	MLAWLRRSDHWMSTGVRVFAGVLIGGAVAAQRDSTRLACTEMHPIGTNLHAFLAFTALRLLDRLNRDRIQMSTTSASHDRLA*
Ga0068862_1006958151	3300005844	Switchgrass Rhizosphere	MSTGVRVFAGVLIRRAVAAQRGSTCLASPQMNPVAADLHAFFAFATMRLLDRLDRNRIQMRAAPGTHDRLV*
Ga0081455_101473342	3300005937	Tabebuia Heterophylla Rhizosphere	MLARLRGSDHRMPTGVRVFAGVLIRGAVAAQRDSTCLARPEMHPIGTDLYAFFAFAALRLLDRINRDCIKMRTTLDIHDRLADDVAFAVALRRDARLM*
Ga0081455_108413631	3300005937	Tabebuia Heterophylla Rhizosphere	DHRMTTGVCVFTGMPIRRAVTTERDSTRLARPQMDPVAADLYALFALALVRLLDRFNRNCIQMRTTPGIHDRLA*
Ga0066696_107002241	3300006032	Soil	WLRRCDHRMSTGVRMFASVLIRRAVAAQRDSTRLARPQMNPVAADLYTFFAFAPMRLLDRLHLNRIQMRTPSVGHRR*
Ga0066656_104062982	3300006034	Soil	MFARLRRCDYRMSTGMRVFAGVLIRRAVAAQRDSTPLARPEMHPVGTDLYAFFAFATMRLLDRLNRDRIQMITASGIHD*
Ga0075418_104196942	3300009100	Populus Rhizosphere	MFAGVLIWRAVAAQRDSTRLARSQMNPVATNLHAFFAFAPVRLIDRLNRNRIQMRTASRIHD*
Ga0066709_1022501711	3300009137	Grasslands Soil	MSTGVRMFAGVLIRRAVAAQRDSTRLARPQMNPVAADLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV*
Ga0111538_123600351	3300009156	Populus Rhizosphere	TFARLRRCDYRVSTRMCMFAGVLIWRAVAAQRDSTRLARSQMNPVATNLHAFFAFAPVRLLDRLNRNRIQMRTASRIHD*
Ga0126374_108504352	3300009792	Tropical Forest Soil	MLARLRRCDHRMSAGMCMFAGVLIRGAVAAQRDSTCLARSEMHPIGTDLYAFFAFAPMRLLDRLNRNRIQMRTASGTHDRLVE*
Ga0134063_104764752	3300010335	Grasslands Soil	GVRVFAGVLIRRAVAAQRDPTRLARPQMNPVAADLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV*
Ga0126378_114064042	3300010361	Tropical Forest Soil	MPNGVRVFAGVLIRRAVAAQRDSTRLARPQMNPVAAYLHAFFAFSPMRLLDRLNRNRI*
Ga0126377_100993502	3300010362	Tropical Forest Soil	MLARLRRCDHRMSTSVRVFASVLIRRAVATQRNSARLARPEMHPIGTDLYAFFAFAALRLLDRLNRDGIEMRTTSDIHDRLA*
Ga0126377_124215732	3300010362	Tropical Forest Soil	HGMFSGVRVFASVLIRRAVAAQGDATRLARPQMNPIATNLHAFFAFAAVRLLDRLNRYRIQMRTASSIHDRLVR*
Ga0134066_100841132	3300010364	Grasslands Soil	GRCNHRMSTGVRMFAGVLIRRAVAAQRDSTRLARPQMNPVAADLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV*
Ga0126379_105504632	3300010366	Tropical Forest Soil	MFAGVLIRGAVAAQRDSTCLARSEMHPIGTDLYAFFAFAPMRLLDRLNRNLIEMRTTSDIHDRLT*
Ga0126379_122665621	3300010366	Tropical Forest Soil	MLAGLRRRDHWMTTGVRVFAGVLIRGAVAAQRDSTHLARSKMHPIRTDLYAFFAFAPVRLLDRLNRNRIQMSTTSNIHDRLA*
Ga0134128_127585422	3300010373	Terrestrial Soil	VFAGVLIRRAVAAQRDSTRLARPQMNPVAADLYAFFAFATMRLLDRLDRNRIQMRAAPGTHDRLV*
Ga0126381_1022742512	3300010376	Tropical Forest Soil	GVRVFAGVLIRRAIAAQGDATRLARPEMHPKGIDLYAFLAFAALRLLNRLNCNRIQMRTTSGIHDRLA*
Ga0126381_1046759171	3300010376	Tropical Forest Soil	MSTGVRMFAGVLIRRAVAAQRNSTRLARSKVHPIGTDLYAFFAFAPVRLLDRLNRYRIQMRTASSIHDRLVR*
Ga0126383_102569332	3300010398	Tropical Forest Soil	MSTGVSMFAGVLIWRAVAAQRDSTRLARPEMHPIGTDLHTFFAFAATRLLDRVNRNLIEMRTTSDIHDRLTG*
Ga0137364_105792261	3300012198	Vadose Zone Soil	MSTGIRVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRSV*
Ga0137383_107739591	3300012199	Vadose Zone Soil	MTTGVRVFAGVLIWRAVAAERDSTRLARPQMHPIGTNLYAFFAFAPMRLLDRLNRNRFQMSTTSDI
Ga0137387_106232832	3300012349	Vadose Zone Soil	LAWLCRRDYRMSTGVCMFCGVAIRRTIAAQRDSTRLARPQMNPVAADLHTFFAFAALWPFDRLDRVQMRAASDTHDRLV*
Ga0137366_107314541	3300012354	Vadose Zone Soil	MTTGVRVFADVLIWRAVAAQRDSTRLARPQMHPIGTNLYAFFAFAPMRLLDRLNRNRFQMSTTSDIHDRLA*
Ga0137397_103254481	3300012685	Vadose Zone Soil	MSAGVRVFAGVLIRRAVAAQRDSTRLARPQMNPVAADLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV*
Ga0157293_100778841	3300012898	Soil	RCDYWMTTSMSMFAGVPIRRAIAAKGDSTRLARPQMDPVATNLYALFAFTAMRLLDRLNRDRIQMRTASRTHGRLVR*
Ga0137395_108252692	3300012917	Vadose Zone Soil	STGVRVFAGVLIRRAVAAQRDSTRLARPQMDPIGTDLYAFFALATMRLLDRLNRDRIQMRTASRTHDRLVW*
Ga0137395_111527421	3300012917	Vadose Zone Soil	DHRMSTGVRMFAGVLIRRAVAAKRYSTCLTRPQMNPVAADLYAFFAFATMRLLDRLNLNRIQMRTASRTHDRLV*
Ga0137394_115892412	3300012922	Vadose Zone Soil	VRVFAGVLIWRAVAAQRDSTRLARPQMHPIGTDLYAFFAFATIRLLDRLNRDRIQMRTASGIHDRLV*
Ga0126375_104769391	3300012948	Tropical Forest Soil	MLAWLRRSDHRMSAGVRVFAGVLIRRAVAAKRDSTRLARSQMHPIASYLNAFFAFAALRLLDRFYCIQMRTTSGTHDRLVR*
Ga0164302_109365852	3300012961	Soil	QPMLARLRRCDHRMSTGVRVFAGVLIRRAVAAQRDSTRLARPQMNPVAADLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV*
Ga0157374_110203452	3300013296	Miscanthus Rhizosphere	YRMTTGGRVFAGVLIRRAVAAQRDSTRLARPEMHPIGTDLYAFFTFATMRLLDRLNRDRIQMRTASRTHDRLG*
Ga0157378_102525522	3300013297	Miscanthus Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTRLARPQMNPVAADLYAFFACATMRLLDRLNRDRIQMRTASRTHDRLV
Ga0134078_100621242	3300014157	Grasslands Soil	MSTGIRVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNGDRIQMRTTFGIHDRLV*
Ga0163163_102133652	3300014325	Switchgrass Rhizosphere	MLARLRRCDHGVTTGVRVFAGVLIRRAVAAQRDSTRLARPEMHPIGTDLYAFFTFATMRLLDRLNRDRIQMRTASRTHDRLG*
Ga0132258_121318042	3300015371	Arabidopsis Rhizosphere	VFAGVLIRRAVAAQRDSTRLAGAEVHPIGTDLYAFFAFAAIWLLDRLNRNRIKMRTTLDIHDRLT*
Ga0132256_1004939651	3300015372	Arabidopsis Rhizosphere	MSTGMRVFAGVLIRRAVAAQRDSTRLARPEMHPIGTDLYAFFAFAAVRLLDRLNRNCIQMRTASSIHDRLVR*
Ga0132256_1008248981	3300015372	Arabidopsis Rhizosphere	PTFPWLRRCGHRMSTGERVFAGVLIWRAVAAQRDSTRLARPQMNPVAADLYAFFAFATVRLLDRLNLNRIQMRTPSGTHDRLV*
Ga0132257_1008547212	3300015373	Arabidopsis Rhizosphere	MRTGVRVLAGVLIRRAVAAQRYSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNRIQVRTASATHDRLV*
Ga0132255_1007992242	3300015374	Arabidopsis Rhizosphere	MRTGVRVLAGVLIRRAVAAQRYSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNRDSIQMRTASATQDRLV*
Ga0132255_1028196511	3300015374	Arabidopsis Rhizosphere	PLLPRLRGSDHRMSTGVRVFAGVLIRRAVAAKRDSTSLARPQMNPIAADLYAFFAFATMRLFDRLNLNRIQMRTPLGTHDQLV*
Ga0132255_1048982341	3300015374	Arabidopsis Rhizosphere	MSTGVRVFAGVLVWRTVAAQRNSTRLACSQMNPVAADLDAFFAFTALRLLDRFDRIQVRTASISHALS
Ga0182034_105490422	3300016371	Soil	MSAGMCMFAGVLIWRAVAAQRDSTRLARPEMHPIGTDLYAFFAFAATRLLDRVNRNLIEMRTTSDIHDRLT
Ga0182034_117761292	3300016371	Soil	MCVFASVLIRRAVAAQRDATRLTRPQMNPIATNLHAFFAFAPVRLLDRLNRYCIQMRTTLGIHDRLV
Ga0182037_104446402	3300016404	Soil	MIARLRRSNHRMSTRVRVFAGVLIRGAVAAQRDSTRLARSEMHPIGTNLHAFFAFAPVRLLDRLNLNRIQMSTTSGIHDRLT
Ga0163161_116640181	3300017792	Switchgrass Rhizosphere	MTTGMSMFAGVPIRRAIAAKGDSTRLARPQMDPVATNLYALFAFTAMRLLDRLNRDRIQMRTALGIHDRLADDVVFADALRRDARLI
Ga0184620_100498332	3300018051	Groundwater Sediment	MLARLRRCDHGMSASVRVFAGVLIWRAVAAQRDSTCLARPQMNPVAADLHAFFAFATMRLLDRLNRDRI
Ga0184635_100800272	3300018072	Groundwater Sediment	MLARLRGSDHRMSTGVCVFAGVLIRRAVAAQRDSTRLARPQMNPVAADLYAFFAFATMRLLDRLNRDRVQMRTASRTHDRLV
Ga0184635_102962112	3300018072	Groundwater Sediment	MSGGVRMFAGVLIWRAVAAQRDSTCLARPEMHPVAADLNAFFAFAAMRLLDRLNRNRIQMRTPSGT
Ga0184625_103580582	3300018081	Groundwater Sediment	MSTGVRVFAGVLIRRAVAAQRDSTRLARPEMYPIGTDFYAFFAFAPMRLLDRLNRNRIQMRTPSGTHDRLV
Ga0173482_100291732	3300019361	Soil	MSTGVRVFAGVLIRRAVAAQRDSTRLARPQMHPVGTDLYAFFAFAAIRLLDGLNVNRIQMRTASRTHGRLVR
Ga0193705_10773141	3300019869	Soil	MLARLRRCDHGMSTSVRVFAGVLIWRAVAAQRDSTCLARPEMHPIGTDLYAFFAFATMRLLDQLNRN
Ga0193722_10081212	3300019877	Soil	MLARLRRCDHRMSTGVRVFAGVLIWRAVAAQRDSTRLARPQMNPVAADLYAFFAFTTMRLLDRLNRDRIQMRTASRTHDRLV
Ga0193725_10688281	3300019883	Soil	MLARLRRCDHRMSTGVRMFAGVLIRRAVAAQRDSTRLARPQMHPIGTDLYAFFAFATIRLLDRLNRDRIQMRTASGIHDRLV
Ga0193727_10078443	3300019886	Soil	MSTGVRVFAGVLIRRAVAAQRDSTRLARPEMHPIGTDLYAFFAFATMRLLDRLNRNRIQMRTPSGTHDRLV
Ga0193727_11484752	3300019886	Soil	RVFAGVLIWRAVAAQRDSTCLARPEMHPIGTDLYAFFAFATMRLLDQLNRNRIQMRTASSTHNRLV
Ga0210382_104504301	3300021080	Groundwater Sediment	MSTGVRMFAGVLIRRAVAAQRDSTRLACPQMNPIGTDLYAFFAFAAMRLLDRLNLNRIQMRTASRTHDRLV
Ga0193750_10176323	3300021413	Soil	MLARLRRCDHRMSTGVRVFAGVLIWRAVAAKRDSTCLARPQMNPVAADLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV
Ga0193695_10528611	3300021418	Soil	RVFASVLIRRAVAAKRRPTCLARPQMNPVAADLHALFAFATMRLLDRLNRDRIQMRTASRTHDRLV
Ga0126371_121376962	3300021560	Tropical Forest Soil	MLAWLRRSDHWMSTGVRVFAGVLIWGAVAAQRDSTRLACPEMHPIGTNLHAFLAFTALRLLDRLNRDRIQMSTTSASHDRLA
Ga0224452_11361502	3300022534	Groundwater Sediment	MSTGVRMFAGVLIRRAVAAKRHSTRLARPEMHPIGTDLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV
Ga0222622_100122123	3300022756	Groundwater Sediment	MLARLRRCDHRMSTGVCVFAGVLIRRAVAAQRDSTRLACPQMNPVAADLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV
Ga0207673_10298171	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTRLARPQMHPVGTDLYAFFAFAAIRLLDGLNVNRIQ
Ga0207701_105401662	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLARLRGSDHRMSAGARVFAGVLIRRAVTAERDSTRLARPEMHPIRTDLYAFFALAAMRLLDRLNHDRIQMRTTLGIHDRLV
Ga0207701_106326461	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSMSMFAGVPIRRAIAAKGDSTRLARPQMDPVATNLYALFAFTAMRLLDRLNRDRIQMRTALGIHDRLADDVVFADALRRDARLI
Ga0207706_113198361	3300025933	Corn Rhizosphere	MTTSMSMFAGVPIRRAIAAKGDSTRLARPQMDPVATNLYALFAFTAMRLLDRLNRDRIQMRTALGIHDRLADDVVFADALRRDARRI
Ga0207679_101055801	3300025945	Corn Rhizosphere	VLIRRTVAAKGDSTCLACPQMDPVTTDLYALFTFTALRLLDRINRNRIQMRTTLSIHDRL
Ga0207702_102514422	3300026078	Corn Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTRLARPEMHPIGADLYAFFAFATMRLLDRVNRDRI
Ga0207675_1000515812	3300026118	Switchgrass Rhizosphere	MSTGVRVFAGVLIRRAVAAQRDSTSLARPEMHPVGTDLYAFFAFATMRMLNRSNRDRIQMGTASRTHDRLV
Ga0209240_12390011	3300026304	Grasslands Soil	MSTGVRVFAGVLIRRAVAAQRDSTRLARPEMHPIGTDLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV
Ga0209155_10718502	3300026316	Soil	MSTGIRVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNGDRIQMRTTFGIHDRLV
Ga0209473_12645141	3300026330	Soil	MFARLRRCDHRMSTGVRVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRFNGDRIQMR
Ga0209807_10774202	3300026530	Soil	MFARLRRCDYRMSTGIRVFAGVLIRRAVAAQRDSTRLARPEMHPVGTDLYAFFAFATMRLLDRLNGDRIQMRTTFGIHDRLV
Ga0307295_100780901	3300028708	Soil	MLARLRRCDHRMSTGVCVFAGVLIWRAVAAQRDSTRLARPQMNPVAADLYAFFAFATLRLLDRLNRDRIQMRTASRTHDRLV
Ga0307280_102888061	3300028768	Soil	MLAWLRRRNHGVTTGMRVFAGVLIWRAVAAQRDSTRLARPEMHPIRTDLYAFFAFATMRLLDRLNRNRIQMRTASR
Ga0307283_101828741	3300028790	Soil	MLARLRRCDHRMSTGLCVFAGVLIWRAVAAQRDSTRLARPEMHPIRTDLYAFFAFATMRLLDRLNRNRIQMRTASRNHSRL
Ga0307284_100773731	3300028799	Soil	MLARLRRCDHGMSASVRVFAGVLIWRAVAAQRDSTCLARPQMNPVAADLYAFFAFATMRLLDRLNRDRIQMRTASRTHDRLV
Ga0307302_105910081	3300028814	Soil	MSTGVRVFAGVLIWRAVAAQRDSTRLARPQMNPVAADLYAFFAFATMRLLDRFNRLQMRTTSGTHDRLV
Ga0307304_104307032	3300028885	Soil	MLARLRRCDHRMSTGVCVFAGVLIRRAVAAQRDSTCLARPQMNPVAADLYAFFAFATMRLLDRLNRNRIQMRTASRTHDRLV
Ga0308190_10472441	3300030993	Soil	GVCVFAGVLIWRAVAAQRDSTCLARPQMNPVAADLYAFFAFATMRLLDRLNRDRFQMRTPSGNHDRLV
Ga0170824_1077861502	3300031231	Forest Soil	MLARLRRRDHRMSTGVRVLAGVLIWRAVAAQRDSACLARPEMHPIRTDLNAFFAFATMRLLDRLNLNRIQMRTPSGTHDRLV
Ga0170820_110729501	3300031446	Forest Soil	MLARLRRCDHRMSTGVRMFAGVLIRRAVAAQRGPTRLARPEMHPIGTNLNAFFAFATMRLLDRLNRNRIQMRTSSGTHDRLV
Ga0170819_100299181	3300031469	Forest Soil	RRDHWMSTSVRMFAGVLIWRAVAAQRDSTRLARPQMNPVAADLYAFFAFATMRLLDRLNRNRIQMRTPSGTHDRLV
Ga0310888_101987581	3300031538	Soil	MLARLRRCDHRMSTGVRVFAGVLIRRAVAAQRGSTRLARPEMHPIRADLYAFFAFATMRLLDRLNRNRIQMRTPSGTHDRLV
Ga0318542_105951781	3300031668	Soil	MSTGVCVFAGVLIRRAVAAQRDSTRLARPEMHPIGTDLHTFFAFAAVRLLDRLNRYRIQMRAASSIHDRLVR
Ga0306917_111191961	3300031719	Soil	MLARLGRSNHRMSTRVRVFAGVLIRGAVAAQRDSTRLARSEMHPIGTNLHAFFAFAPVRLLDRLNLNRI
Ga0310907_106815381	3300031847	Soil	MLARLRRCDHRMSTGVRVFAGVLIRRAVAAQRGSTRLARPEMHPIRADLYAFFAFATMRLLDRLNLDRIQMRTPS
Ga0306925_101930073	3300031890	Soil	MSTRMCVFASVLIRRAVAAQRDATRLTRPQMNPIATNLHAFFAFAPVRLLDRLNRYCIQMRTTLGIHDRLVR
Ga0306923_103780862	3300031910	Soil	MLARLGRSNHRMSTRVRVFAGVLIRGAVAAQRDSTRLARSEMHPIGTNLHAFFAFAPVRLLDRLNRYRIQMRTASSIHDRLVR
Ga0310916_105736201	3300031942	Soil	DHRMSTGVCVFAGVLIRRAVAAQRDSTRLARPEMHPIGTDLHAFFAFAPVRLLDRLNRYRIQMRTASSIHDRLVR
Ga0306926_109169482	3300031954	Soil	MLARLGRSNHRMSTRVRVFAGVLIRGAVAAQRDSTRLARSEMHPIGTNLHAFFAFAPVRLLDRLNLNRIQMSTTSGIHDRLT
Ga0306922_101139023	3300032001	Soil	MLPRLRRCNHGMSTGVCVFACVLIRRTIAAQRDSTRLARPEMHPIGTDLHAFFAFAPVRLLDRLNRYRIQMRTASSIHDRLVR
Ga0307472_1000129312	3300032205	Hardwood Forest Soil	MLTGVRVFAGVLIRRAVAAQRDSTCLARPQMHPVAADLNAFFAFAAMRLFDRFNRIQMSAASGTHD
Ga0306920_1001974053	3300032261	Soil	MIARLRRSNHRMSTRVRVFAGVLIRGAVAAQRDSTRLARSEMHPIGTNPHAFFAFAPVRLLDRLNLNRIQMSTTSGIHDRLT
Ga0310914_112176012	3300033289	Soil	MLARLGRSNHRMSTRVRVFAGVLIRGAVAAQRDSTRLARSEMHPIGTNPHAFFAFAPVRLLDRLNLNRIQMSTTSGIHDRLT
Ga0310811_106813871	3300033475	Soil	MTTGGRVFAGVLIRRAVAAQRDSTRLARPEMHPIGADLYAFFAFATLRLLDRVSLDRVQMRTTLEVHD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066400

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences